AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0486770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0486770 MtrunA17_Chr3g0102571 59.108 269 88 5 1 260 1 256 1.60e-94 286
Msa0486770 MtrunA17_Chr3g0102571 79.032 62 13 0 257 318 355 416 2.85e-27 110
Msa0486770 MtrunA17_Chr8g0378831 48.855 262 82 4 1 262 1 210 7.06e-69 219
Msa0486770 MtrunA17_Chr8g0378831 64.516 62 21 1 257 318 308 368 2.93e-21 92.8
Msa0486770 MtrunA17_Chr3g0141871 48.659 261 82 3 1 261 1 209 6.02e-68 216
Msa0486770 MtrunA17_Chr3g0141871 48.387 62 31 1 257 318 308 368 2.34e-12 67.0
Msa0486770 MtrunA17_Chr7g0248461 43.033 244 85 6 19 261 24 214 4.04e-51 173
Msa0486770 MtrunA17_Chr4g0030151 42.500 240 84 4 19 257 25 211 4.88e-51 172
Msa0486770 MtrunA17_Chr5g0397261 41.803 244 88 5 19 261 27 217 8.66e-51 172
Msa0486770 MtrunA17_Chr3g0102611 89.535 86 9 0 1 86 1 86 1.26e-50 162
Msa0486770 MtrunA17_Chr3g0102611 89.535 86 9 0 98 183 1 86 1.26e-50 162
Msa0486770 MtrunA17_Chr8g0387401 43.443 244 84 7 19 261 38 228 2.56e-50 171
Msa0486770 MtrunA17_Chr8g0348481 42.798 243 85 8 19 260 23 212 1.67e-49 169
Msa0486770 MtrunA17_Chr4g0045841 41.667 240 86 6 19 257 41 227 2.24e-49 169
Msa0486770 MtrunA17_Chr4g0030231 40.741 243 90 5 19 260 26 215 2.26e-47 163
Msa0486770 MtrunA17_Chr8g0378851 59.794 97 39 0 98 194 1 97 6.88e-35 122
Msa0486770 MtrunA17_Chr8g0378851 57.732 97 41 0 1 97 1 97 2.22e-33 118
Msa0486770 MtrunA17_Chr8g0359091 35.593 236 97 5 24 256 18 201 4.56e-34 131
Msa0486770 MtrunA17_Chr2g0287271 40.217 184 62 3 121 256 17 200 2.33e-33 129
Msa0486770 MtrunA17_Chr3g0096631 38.974 195 70 3 111 256 6 200 3.60e-33 129
Msa0486770 MtrunA17_Chr8g0392811 34.167 240 103 4 20 256 105 292 4.05e-33 128
Msa0486770 MtrunA17_Chr5g0443351 35.319 235 95 7 26 256 16 197 1.02e-32 126
Msa0486770 MtrunA17_Chr4g0065851 39.674 184 63 3 121 256 17 200 1.54e-32 126
Msa0486770 MtrunA17_Chr6g0482681 38.043 184 66 2 121 256 81 264 9.96e-32 124
Msa0486770 MtrunA17_Chr2g0314321 33.051 236 103 4 24 256 17 200 1.06e-31 124
Msa0486770 MtrunA17_Chr3g0102601 83.871 62 10 0 257 318 193 254 1.21e-31 119
Msa0486770 MtrunA17_Chr3g0102601 87.500 48 6 0 191 238 41 88 1.17e-20 89.4
Msa0486770 MtrunA17_Chr4g0030241 66.216 74 24 1 188 261 5 77 1.64e-25 100
Msa0486770 MtrunA17_Chr3g0102581 67.606 71 23 0 125 195 2 72 8.03e-23 94.4
Msa0486770 MtrunA17_Chr3g0102581 67.606 71 23 0 28 98 2 72 1.15e-22 94.0
Msa0486770 MtrunA17_Chr4g0051261 33.702 181 74 3 128 265 3 180 1.55e-22 95.5
Msa0486770 MtrunA17_Chr2g0293491 33.702 181 74 3 128 265 3 180 6.07e-22 93.6
Msa0486770 MtrunA17_Chr5g0409421 34.503 171 68 4 128 257 3 170 2.28e-20 91.3
Msa0486770 MtrunA17_Chr3g0093391 31.579 228 113 5 32 257 23 209 1.96e-19 88.6
Msa0486770 MtrunA17_Chr3g0093571 31.532 222 109 5 38 257 31 211 4.92e-19 87.4
Msa0486770 MtrunA17_Chr4g0057791 31.818 176 75 1 127 257 216 391 4.93e-19 87.4
Msa0486770 MtrunA17_Chr8g0339221 33.529 170 69 4 129 257 4 170 2.53e-16 79.3
Msa0486770 MtrunA17_Chr4g0061141 32.000 175 71 5 129 257 105 277 5.48e-16 78.6
Msa0486770 MtrunA17_Chr5g0396361 30.636 173 76 2 129 257 140 312 7.22e-16 78.2
Msa0486770 MtrunA17_Chr8g0377071 33.735 166 67 1 135 257 391 556 7.27e-16 78.2
Msa0486770 MtrunA17_Chr3g0122781 31.792 173 75 1 128 257 415 587 1.19e-15 77.8
Msa0486770 MtrunA17_Chr8g0378871 58.730 63 24 2 257 318 92 153 4.41e-15 71.6
Msa0486770 MtrunA17_Chr3g0131861 33.136 169 65 5 135 257 103 269 8.98e-14 72.0
Msa0486770 MtrunA17_Chr2g0317501 32.544 169 66 5 135 257 140 306 9.94e-14 72.0
Msa0486770 MtrunA17_Chr8g0385971 31.792 173 74 2 129 257 90 262 1.98e-13 70.9
Msa0486770 MtrunA17_Chr4g0040141 32.164 171 64 5 135 257 135 301 2.80e-13 70.5
Msa0486770 MtrunA17_Chr8g0341251 27.179 195 109 7 88 255 11 199 4.00e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0486770 AT2G18170.1 50.958 261 76 4 1 261 1 209 1.18e-72 229
Msa0486770 AT2G18170.1 56.452 62 26 1 257 318 308 368 1.11e-14 74.3
Msa0486770 AT1G10210.2 48.276 261 83 3 1 261 1 209 2.65e-70 223
Msa0486770 AT1G10210.2 56.452 62 26 1 257 318 308 368 1.88e-15 76.6
Msa0486770 AT1G10210.3 48.276 261 83 3 1 261 1 209 2.65e-70 223
Msa0486770 AT1G10210.3 56.452 62 26 1 257 318 308 368 1.88e-15 76.6
Msa0486770 AT1G10210.1 48.276 261 83 3 1 261 1 209 2.65e-70 223
Msa0486770 AT1G10210.1 56.452 62 26 1 257 318 308 368 1.88e-15 76.6
Msa0486770 AT1G59580.2 47.126 261 86 3 1 261 1 209 1.04e-67 216
Msa0486770 AT1G59580.1 47.126 261 86 3 1 261 1 209 1.04e-67 216
Msa0486770 AT4G36450.1 55.981 209 44 2 98 261 1 206 8.19e-66 211
Msa0486770 AT3G45640.1 42.324 241 85 4 18 257 23 210 1.06e-51 175
Msa0486770 AT1G07880.1 42.083 240 85 5 19 257 19 205 5.63e-51 169
Msa0486770 AT2G43790.1 47.340 188 52 3 116 257 49 235 4.92e-50 171
Msa0486770 AT1G07880.2 42.083 240 85 5 19 257 19 205 5.01e-50 170
Msa0486770 AT4G01370.1 43.033 244 85 7 19 261 29 219 2.10e-49 169
Msa0486770 AT4G11330.1 40.984 244 90 6 15 257 25 215 2.13e-48 166
Msa0486770 AT3G59790.1 44.681 188 57 3 116 257 46 232 2.51e-46 161
Msa0486770 AT1G01560.4 41.803 244 88 7 19 261 26 216 2.89e-46 158
Msa0486770 AT1G01560.1 41.803 244 88 7 19 261 26 216 2.89e-46 158
Msa0486770 AT1G01560.3 41.803 244 88 7 19 261 26 216 7.93e-46 159
Msa0486770 AT1G01560.2 41.803 244 88 7 19 261 26 216 1.51e-45 159
Msa0486770 AT2G46070.2 39.754 244 93 6 19 261 27 217 2.06e-44 154
Msa0486770 AT2G46070.1 39.754 244 93 6 19 261 27 217 7.31e-44 154
Msa0486770 AT2G46070.3 39.754 244 93 6 19 261 61 251 1.22e-43 154
Msa0486770 AT3G14720.2 35.685 241 99 5 24 260 17 205 1.07e-35 134
Msa0486770 AT3G14720.3 35.685 241 99 5 24 260 17 205 1.07e-35 134
Msa0486770 AT3G14720.1 35.270 241 100 5 24 260 17 205 4.00e-35 134
Msa0486770 AT5G19010.1 40.761 184 61 3 121 256 17 200 9.68e-34 130
Msa0486770 AT2G42880.2 37.838 222 83 5 38 256 31 200 4.81e-33 127
Msa0486770 AT1G18150.3 37.073 205 73 3 108 256 75 279 1.14e-32 127
Msa0486770 AT1G18150.2 37.073 205 73 3 108 256 75 279 1.14e-32 127
Msa0486770 AT1G18150.1 37.073 205 73 3 108 256 75 279 1.14e-32 127
Msa0486770 AT2G42880.1 37.838 222 83 5 38 256 31 200 1.25e-32 127
Msa0486770 AT3G18040.5 37.766 188 69 2 117 256 6 193 1.47e-32 126
Msa0486770 AT3G18040.1 37.766 188 69 2 117 256 11 198 1.64e-32 126
Msa0486770 AT3G18040.4 33.761 234 107 2 71 256 74 307 1.95e-32 127
Msa0486770 AT3G18040.3 33.761 234 107 2 71 256 74 307 2.24e-32 127
Msa0486770 AT1G53510.1 35.021 237 97 6 24 256 17 200 3.33e-32 126
Msa0486770 AT1G73670.1 39.130 184 64 2 121 256 82 265 1.07e-31 124
Msa0486770 AT2G01450.3 36.413 184 69 2 121 256 8 191 2.22e-29 117
Msa0486770 AT2G01450.1 36.413 184 69 2 121 256 8 191 2.22e-29 117
Msa0486770 AT2G01450.2 36.413 184 69 2 121 256 8 191 2.22e-29 117
Msa0486770 AT2G01450.4 36.413 184 69 2 121 256 8 191 2.22e-29 117
Msa0486770 AT3G48750.1 33.526 173 72 2 128 257 3 175 1.20e-22 95.9
Msa0486770 AT4G19110.1 35.088 171 67 4 128 257 3 170 8.85e-22 95.9
Msa0486770 AT4G19110.2 35.088 171 67 4 128 257 3 170 9.34e-22 95.5
Msa0486770 AT1G73690.1 34.756 164 66 1 135 257 17 180 2.53e-21 94.0
Msa0486770 AT5G10270.1 32.579 221 108 4 38 257 32 212 2.31e-19 89.0
Msa0486770 AT5G63370.9 32.022 178 73 2 128 257 162 339 3.07e-19 88.2
Msa0486770 AT5G63370.2 32.022 178 73 2 128 257 162 339 4.53e-19 87.8
Msa0486770 AT5G63370.3 32.022 178 73 2 128 257 162 339 4.53e-19 87.8
Msa0486770 AT5G64960.1 33.032 221 107 5 38 257 32 212 4.89e-19 87.8
Msa0486770 AT5G63370.7 32.022 178 73 2 128 257 296 473 5.95e-19 87.8
Msa0486770 AT5G63370.8 32.022 178 73 2 128 257 296 473 5.95e-19 87.8
Msa0486770 AT5G63370.4 32.022 178 73 2 128 257 296 473 5.95e-19 87.8
Msa0486770 AT5G63370.6 32.022 178 73 2 128 257 296 473 5.95e-19 87.8
Msa0486770 AT5G63370.1 32.022 178 73 2 128 257 296 473 5.95e-19 87.8
Msa0486770 AT5G63370.5 32.022 178 73 2 128 257 296 473 5.98e-19 87.8
Msa0486770 AT5G63370.10 32.022 178 73 2 128 257 296 473 5.98e-19 87.8
Msa0486770 AT4G13020.1 35.088 171 67 4 128 257 3 170 8.45e-19 87.0
Msa0486770 AT4G13020.4 35.088 171 67 4 128 257 3 170 9.20e-19 86.7
Msa0486770 AT4G13020.2 34.483 174 70 4 125 257 8 178 9.64e-19 86.7
Msa0486770 AT4G13020.6 35.088 171 67 4 128 257 3 170 9.66e-19 86.3
Msa0486770 AT4G13020.3 34.483 174 70 4 125 257 8 178 9.68e-19 86.7
Msa0486770 AT4G13020.7 35.088 171 67 4 128 257 3 170 1.06e-18 86.3
Msa0486770 AT1G67580.1 33.735 166 67 1 135 257 412 577 6.37e-18 85.1
Msa0486770 AT1G67580.2 33.735 166 67 1 135 257 412 577 6.37e-18 85.1
Msa0486770 AT5G63610.1 32.609 184 70 4 128 257 24 207 2.54e-17 82.8
Msa0486770 AT3G18040.2 53.623 69 29 1 191 256 42 110 8.31e-17 80.9
Msa0486770 AT4G13020.5 33.333 180 67 5 128 257 3 179 4.33e-16 79.0
Msa0486770 AT4G13020.8 33.333 180 67 5 128 257 3 179 5.64e-16 78.2
Msa0486770 AT1G33770.1 32.948 173 72 2 129 257 141 313 8.50e-16 78.6
Msa0486770 AT2G38620.4 36.029 136 73 4 128 257 3 130 1.42e-15 75.5
Msa0486770 AT1G71530.2 32.335 167 69 2 135 257 153 319 1.98e-15 77.0
Msa0486770 AT1G71530.4 32.335 167 69 2 135 257 153 319 2.15e-15 76.3
Msa0486770 AT1G71530.3 32.335 167 69 2 135 257 153 319 2.20e-15 76.6
Msa0486770 AT1G71530.1 32.335 167 69 2 135 257 153 319 2.73e-15 77.0
Msa0486770 AT4G10010.2 33.533 167 67 2 135 257 162 328 3.71e-15 76.6
Msa0486770 AT1G18670.2 31.250 176 72 5 129 257 131 304 4.89e-15 76.3
Msa0486770 AT1G18670.3 31.250 176 72 5 129 257 131 304 5.13e-15 76.3
Msa0486770 AT1G18670.1 31.250 176 72 5 129 257 131 304 5.44e-15 76.3
Msa0486770 AT5G50860.1 32.203 177 72 5 127 257 112 286 1.10e-14 75.1
Msa0486770 AT5G50860.2 32.203 177 72 5 127 257 112 286 1.24e-14 74.7
Msa0486770 AT5G44290.7 29.775 178 75 3 127 257 135 309 2.73e-14 73.6
Msa0486770 AT5G44290.6 29.775 178 75 3 127 257 135 309 3.37e-14 73.6
Msa0486770 AT5G44290.2 29.775 178 75 3 127 257 135 309 4.29e-14 73.2
Msa0486770 AT5G44290.5 29.775 178 75 3 127 257 135 309 4.29e-14 73.2
Msa0486770 AT5G44290.4 29.775 178 75 3 127 257 135 309 4.29e-14 73.2
Msa0486770 AT5G44290.1 29.775 178 75 3 127 257 135 309 4.29e-14 73.2
Msa0486770 AT5G44290.3 29.775 178 75 3 127 257 135 309 4.29e-14 73.2
Msa0486770 AT4G22940.1 29.762 168 73 2 135 257 109 276 1.10e-12 68.9
Msa0486770 AT4G22940.2 30.588 170 69 5 135 257 109 276 1.14e-12 68.9
Msa0486770 AT1G09600.1 32.370 173 73 2 129 257 163 335 1.21e-12 68.9
Msa0486770 AT5G64960.2 30.645 186 88 5 73 257 14 159 1.42e-11 65.5
Msa0486770 AT4G10010.1 51.471 68 32 1 191 257 81 148 5.06e-11 63.9

Find 74 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTCACATTGATGAAAAT+TGG 0.148851 3_4:+4803641 Msa0486770:CDS
AGAAACTTATTTGATGATTA+TGG 0.196813 3_4:+4801660 Msa0486770:CDS
AGAAACTTATTTGATGATTA+TGG 0.196813 3_4:+4802224 Msa0486770:CDS
GTGATGCTCTGAGAACTTTA+AGG 0.259738 3_4:+4801682 Msa0486770:CDS
GTGATGCTCTGAGAACTTTA+AGG 0.259738 3_4:+4802246 Msa0486770:CDS
GCATTGACGTGCAGATTATC+AGG 0.298410 3_4:-4803142 None:intergenic
ATTTGAAGATATGTAATTTC+GGG 0.298767 3_4:+4803173 Msa0486770:CDS
CTCATTGGTATCCATATTGA+TGG 0.309376 3_4:-4801616 None:intergenic
CTCATTGGTATCCATATTGA+TGG 0.309376 3_4:-4802180 None:intergenic
CTTGATTGCCACTTTCTCAT+TGG 0.318091 3_4:-4801631 None:intergenic
CTTGATTGCCACTTTCTCAT+TGG 0.318091 3_4:-4802195 None:intergenic
ATTGGGATAACAAGATGATT+AGG 0.321414 3_4:+4803659 Msa0486770:CDS
GATTTGAAGATATGTAATTT+CGG 0.333198 3_4:+4803172 Msa0486770:CDS
TTGCATAGATCAGCCATATA+TGG 0.351435 3_4:-4803580 None:intergenic
TGGAAGCCGCAATCAGAAAT+AGG 0.355755 3_4:+4801484 Msa0486770:CDS
TGGAAGCCGCAATCAGAAAT+AGG 0.355755 3_4:+4802048 Msa0486770:CDS
CTCTTATTTCAGTTACTTCA+AGG 0.366635 3_4:+4803073 Msa0486770:intron
CGTGCAGATTATCAGGCTTC+AGG 0.372819 3_4:-4803135 None:intergenic
TCTTCACATTGATGAAAATT+GGG 0.390420 3_4:+4803642 Msa0486770:CDS
CCATATGTTCCTCGGCCAAT+AGG 0.397748 3_4:-4801579 None:intergenic
CCATATGTTCCTCGGCCAAT+AGG 0.397748 3_4:-4802143 None:intergenic
TTGGGATAACAAGATGATTA+GGG 0.426294 3_4:+4803660 Msa0486770:CDS
AGGACTCCGACATCCATATA+TGG 0.427432 3_4:+4803567 Msa0486770:CDS
TAACCGTCCTCTTCAAGTTC+CGG 0.429226 3_4:+4803615 Msa0486770:CDS
AGGAATAATGACAACTTTAG+TGG 0.429627 3_4:+4801464 None:intergenic
AGGAATAATGACAACTTTAG+TGG 0.429627 3_4:+4802028 Msa0486770:intron
CCTCGGCCAATAGGCTTGAT+TGG 0.431230 3_4:-4801570 None:intergenic
CCTCGGCCAATAGGCTTGAT+TGG 0.431230 3_4:-4802134 None:intergenic
CCTATTGGCCGAGGAACATA+TGG 0.433281 3_4:+4801579 Msa0486770:CDS
CCTATTGGCCGAGGAACATA+TGG 0.433281 3_4:+4802143 Msa0486770:CDS
GCATTGACAAAAGCAGCTTC+AGG 0.435785 3_4:-4803715 None:intergenic
TGAAGTTGCTTAGACATGTT+AGG 0.446580 3_4:+4801709 Msa0486770:CDS
TGAAGTTGCTTAGACATGTT+AGG 0.446580 3_4:+4802273 Msa0486770:CDS
ATGTAATTTCGGGCTTGCTC+GGG 0.455061 3_4:+4803183 Msa0486770:CDS
GTATAACAATGCTTTCTCCT+TGG 0.462626 3_4:-4801507 None:intergenic
GTATAACAATGCTTTCTCCT+TGG 0.462626 3_4:-4802071 None:intergenic
TATGTAATTTCGGGCTTGCT+CGG 0.466231 3_4:+4803182 Msa0486770:CDS
GCTCGGGAAAATCAAGTTGA+TGG 0.468124 3_4:+4803199 Msa0486770:CDS
TGATGCTCTGAGAACTTTAA+GGG 0.469642 3_4:+4801683 Msa0486770:CDS
TGATGCTCTGAGAACTTTAA+GGG 0.469642 3_4:+4802247 Msa0486770:CDS
TATCGTCCAATCAAGCCTAT+TGG 0.475033 3_4:+4801564 Msa0486770:CDS
TATCGTCCAATCAAGCCTAT+TGG 0.475033 3_4:+4802128 Msa0486770:CDS
GGTGTGCTCATCCATCAATA+TGG 0.478960 3_4:+4801605 Msa0486770:CDS
GGTGTGCTCATCCATCAATA+TGG 0.478960 3_4:+4802169 Msa0486770:CDS
GATTATCAGGCTTCAGGTCC+CGG 0.488143 3_4:-4803129 None:intergenic
ATTCTGCAAATATTCTTCAC+CGG 0.491305 3_4:+4803110 Msa0486770:CDS
TCATCAATGTGAAGATTGAC+CGG 0.493486 3_4:-4803634 None:intergenic
CCACATATCGATAGAAGCTC+TGG 0.502904 3_4:-4803265 None:intergenic
CCTTGGCCTATTTCTGATTG+CGG 0.516973 3_4:-4801490 None:intergenic
CCTTGGCCTATTTCTGATTG+CGG 0.516973 3_4:-4802054 None:intergenic
TATGGATACCAATGAGAAAG+TGG 0.527676 3_4:+4801623 Msa0486770:CDS
TATGGATACCAATGAGAAAG+TGG 0.527676 3_4:+4802187 Msa0486770:CDS
GAAAGCATTGTTATACAATG+TGG 0.539422 3_4:+4801514 Msa0486770:CDS
GAAAGCATTGTTATACAATG+TGG 0.539422 3_4:+4802078 Msa0486770:CDS
ACACCACGCCATATGTTCCT+CGG 0.562625 3_4:-4801587 None:intergenic
ACACCACGCCATATGTTCCT+CGG 0.562625 3_4:-4802151 None:intergenic
CCAATCAAGCCTATTGGCCG+AGG 0.564493 3_4:+4801570 Msa0486770:CDS
CCAATCAAGCCTATTGGCCG+AGG 0.564493 3_4:+4802134 Msa0486770:CDS
AAAGCATTGTTATACAATGT+GGG 0.566792 3_4:+4801515 Msa0486770:CDS
AAAGCATTGTTATACAATGT+GGG 0.566792 3_4:+4802079 Msa0486770:CDS
CAGAGTATGTTGTCACGTGC+TGG 0.572417 3_4:+4803233 Msa0486770:CDS
CTGATCTATGCAATGATCAA+TGG 0.575443 3_4:+4803590 Msa0486770:CDS
TTCTGCAAATATTCTTCACC+GGG 0.580637 3_4:+4803111 Msa0486770:CDS
CCAGAGCTTCTATCGATATG+TGG 0.590202 3_4:+4803265 Msa0486770:CDS
GAGAATGTGATTGCTTTGAA+AGG 0.596382 3_4:+4801735 Msa0486770:CDS
GATCAGCCATATATGGATGT+CGG 0.608682 3_4:-4803573 None:intergenic
AGATTGACCGGAACTTGAAG+AGG 0.609187 3_4:-4803622 None:intergenic
CCGCAATCAGAAATAGGCCA+AGG 0.621799 3_4:+4801490 Msa0486770:CDS
CCGCAATCAGAAATAGGCCA+AGG 0.621799 3_4:+4802054 Msa0486770:CDS
AGATGATTAGGGAAATGATG+TGG 0.624256 3_4:+4803671 Msa0486770:CDS
TGACAAAAGCAGCTTCAGGA+TGG 0.635954 3_4:-4803711 None:intergenic
TGACCGGAACTTGAAGAGGA+CGG 0.635960 3_4:-4803618 None:intergenic
TGGCCGAGGAACATATGGCG+TGG 0.681753 3_4:+4801584 Msa0486770:CDS
TGGCCGAGGAACATATGGCG+TGG 0.681753 3_4:+4802148 Msa0486770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGAAACTTATTTGATGATTA+TGG + chr3_4:4801660-4801679 Msa0486770:CDS 20.0%
!!! AGAAACTTATTTGATGATTA+TGG + chr3_4:4801660-4801679 Msa0486770:CDS 20.0%
!! AATCATAAAGAAATCTATAC+AGG - chr3_4:4802925-4802944 None:intergenic 20.0%
!!! ATAAGAAAATTGTTTTGAAC+TGG - chr3_4:4802991-4803010 None:intergenic 20.0%
!! GATTTGAAGATATGTAATTT+CGG + chr3_4:4803172-4803191 Msa0486770:CDS 20.0%
!! ATTTGAAGATATGTAATTTC+GGG + chr3_4:4803173-4803192 Msa0486770:CDS 20.0%
!!! CATTTTTTGTAACAAATCAA+TGG - chr3_4:4803508-4803527 None:intergenic 20.0%
!!! ATGCAGTAATTTTTTTTAGT+TGG - chr3_4:4803543-4803562 None:intergenic 20.0%
!!! AGAAACTTATTTGATGATTA+TGG + chr3_4:4801660-4801679 Msa0486770:CDS 20.0%
!!! AGAAACTTATTTGATGATTA+TGG + chr3_4:4801660-4801679 Msa0486770:CDS 20.0%
!! AATCATAAAGAAATCTATAC+AGG - chr3_4:4802925-4802944 None:intergenic 20.0%
!!! ATAAGAAAATTGTTTTGAAC+TGG - chr3_4:4802991-4803010 None:intergenic 20.0%
!! GATTTGAAGATATGTAATTT+CGG + chr3_4:4803172-4803191 Msa0486770:CDS 20.0%
!! ATTTGAAGATATGTAATTTC+GGG + chr3_4:4803173-4803192 Msa0486770:CDS 20.0%
!!! CATTTTTTGTAACAAATCAA+TGG - chr3_4:4803508-4803527 None:intergenic 20.0%
!!! ATGCAGTAATTTTTTTTAGT+TGG - chr3_4:4803543-4803562 None:intergenic 20.0%
!!! AAAGCATTGTTATACAATGT+GGG + chr3_4:4801515-4801534 Msa0486770:CDS 25.0%
!!! TTGTTTTTTCTTGCTTCTTT+CGG - chr3_4:4801776-4801795 None:intergenic 25.0%
! AAAAGAAAATTAGCCATAAG+AGG + chr3_4:4801796-4801815 Msa0486770:intron 25.0%
!!! ATCTACTTCTTTTTCATAGA+AGG + chr3_4:4801882-4801901 Msa0486770:intron 25.0%
!!! AAAGCATTGTTATACAATGT+GGG + chr3_4:4801515-4801534 Msa0486770:CDS 25.0%
!! TATCCTTAAAACTTGTTCTT+TGG - chr3_4:4802339-4802358 None:intergenic 25.0%
!!! AAGTTTTAAGGATATCTACT+AGG + chr3_4:4802345-4802364 Msa0486770:intron 25.0%
! CTTATAGATTAGTGAATTCT+AGG + chr3_4:4802652-4802671 Msa0486770:intron 25.0%
!! TGTGAACTTACATTGATTAT+TGG + chr3_4:4802834-4802853 Msa0486770:intron 25.0%
! CACTTATGAATAGTTTCATT+TGG - chr3_4:4803359-4803378 None:intergenic 25.0%
! AAACTATTCATAAGTGTTCT+TGG + chr3_4:4803363-4803382 Msa0486770:intron 25.0%
! AAAAAAATTACTGCATCAGA+AGG + chr3_4:4803547-4803566 Msa0486770:intron 25.0%
! ATCTTCACATTGATGAAAAT+TGG + chr3_4:4803641-4803660 Msa0486770:CDS 25.0%
! TCTTCACATTGATGAAAATT+GGG + chr3_4:4803642-4803661 Msa0486770:CDS 25.0%
!!! AAAGCATTGTTATACAATGT+GGG + chr3_4:4801515-4801534 Msa0486770:CDS 25.0%
!!! TTGTTTTTTCTTGCTTCTTT+CGG - chr3_4:4801776-4801795 None:intergenic 25.0%
! AAAAGAAAATTAGCCATAAG+AGG + chr3_4:4801796-4801815 Msa0486770:intron 25.0%
!!! ATCTACTTCTTTTTCATAGA+AGG + chr3_4:4801882-4801901 Msa0486770:intron 25.0%
!!! AAAGCATTGTTATACAATGT+GGG + chr3_4:4801515-4801534 Msa0486770:CDS 25.0%
!! TATCCTTAAAACTTGTTCTT+TGG - chr3_4:4802339-4802358 None:intergenic 25.0%
!!! AAGTTTTAAGGATATCTACT+AGG + chr3_4:4802345-4802364 Msa0486770:intron 25.0%
! CTTATAGATTAGTGAATTCT+AGG + chr3_4:4802652-4802671 Msa0486770:intron 25.0%
!! TGTGAACTTACATTGATTAT+TGG + chr3_4:4802834-4802853 Msa0486770:intron 25.0%
! CACTTATGAATAGTTTCATT+TGG - chr3_4:4803359-4803378 None:intergenic 25.0%
! AAACTATTCATAAGTGTTCT+TGG + chr3_4:4803363-4803382 Msa0486770:intron 25.0%
! AAAAAAATTACTGCATCAGA+AGG + chr3_4:4803547-4803566 Msa0486770:intron 25.0%
! ATCTTCACATTGATGAAAAT+TGG + chr3_4:4803641-4803660 Msa0486770:CDS 25.0%
! TCTTCACATTGATGAAAATT+GGG + chr3_4:4803642-4803661 Msa0486770:CDS 25.0%
!! GAAAGCATTGTTATACAATG+TGG + chr3_4:4801514-4801533 Msa0486770:CDS 30.0%
!!! TGTTTTTTCTTGCTTCTTTC+GGG - chr3_4:4801775-4801794 None:intergenic 30.0%
AGGAATAATGACAACTTTAG+TGG + chr3_4:4802028-4802047 Msa0486770:intron 30.0%
!! GAAAGCATTGTTATACAATG+TGG + chr3_4:4801514-4801533 Msa0486770:CDS 30.0%
! TTAAAACTTGTTCTTTGGTC+TGG - chr3_4:4802334-4802353 None:intergenic 30.0%
! AGACCAAAGAACAAGTTTTA+AGG + chr3_4:4802333-4802352 Msa0486770:intron 30.0%
! AACTCTTACAGTGTTTTATG+TGG + chr3_4:4802507-4802526 Msa0486770:intron 30.0%
! GAATTGGGAAATTTGAGTTT+AGG + chr3_4:4802553-4802572 Msa0486770:intron 30.0%
! GGAAGAAATTAGTGTTGAAT+TGG + chr3_4:4802615-4802634 Msa0486770:intron 30.0%
! AGATTAGTGAATTCTAGGAA+AGG + chr3_4:4802657-4802676 Msa0486770:intron 30.0%
GTAGTTACGTTGTATAAATG+AGG + chr3_4:4802681-4802700 Msa0486770:intron 30.0%
TCACATTAATTTCCCAACTT+GGG - chr3_4:4802819-4802838 None:intergenic 30.0%
TTCACATTAATTTCCCAACT+TGG - chr3_4:4802820-4802839 None:intergenic 30.0%
GGAAAATTGTAGTTCGTAAT+AGG - chr3_4:4802904-4802923 None:intergenic 30.0%
TATGATTAGCAACAAACAGA+AGG - chr3_4:4803051-4803070 None:intergenic 30.0%
! CTCTTATTTCAGTTACTTCA+AGG + chr3_4:4803073-4803092 Msa0486770:intron 30.0%
ATTCTGCAAATATTCTTCAC+CGG + chr3_4:4803110-4803129 Msa0486770:CDS 30.0%
TGTAGTTAATCCAAAAACCA+AGG + chr3_4:4803410-4803429 Msa0486770:intron 30.0%
AAATCACTTCCCTATACAAA+GGG + chr3_4:4803441-4803460 Msa0486770:intron 30.0%
TGTAACAAATCAATGGCTAA+TGG - chr3_4:4803501-4803520 None:intergenic 30.0%
ATTGGGATAACAAGATGATT+AGG + chr3_4:4803659-4803678 Msa0486770:CDS 30.0%
TTGGGATAACAAGATGATTA+GGG + chr3_4:4803660-4803679 Msa0486770:CDS 30.0%
!! GAAAGCATTGTTATACAATG+TGG + chr3_4:4801514-4801533 Msa0486770:CDS 30.0%
!!! TGTTTTTTCTTGCTTCTTTC+GGG - chr3_4:4801775-4801794 None:intergenic 30.0%
AGGAATAATGACAACTTTAG+TGG + chr3_4:4802028-4802047 Msa0486770:intron 30.0%
!! GAAAGCATTGTTATACAATG+TGG + chr3_4:4801514-4801533 Msa0486770:CDS 30.0%
! TTAAAACTTGTTCTTTGGTC+TGG - chr3_4:4802334-4802353 None:intergenic 30.0%
! AGACCAAAGAACAAGTTTTA+AGG + chr3_4:4802333-4802352 Msa0486770:intron 30.0%
! AACTCTTACAGTGTTTTATG+TGG + chr3_4:4802507-4802526 Msa0486770:intron 30.0%
! GAATTGGGAAATTTGAGTTT+AGG + chr3_4:4802553-4802572 Msa0486770:intron 30.0%
! GGAAGAAATTAGTGTTGAAT+TGG + chr3_4:4802615-4802634 Msa0486770:intron 30.0%
! AGATTAGTGAATTCTAGGAA+AGG + chr3_4:4802657-4802676 Msa0486770:intron 30.0%
GTAGTTACGTTGTATAAATG+AGG + chr3_4:4802681-4802700 Msa0486770:intron 30.0%
TCACATTAATTTCCCAACTT+GGG - chr3_4:4802819-4802838 None:intergenic 30.0%
TTCACATTAATTTCCCAACT+TGG - chr3_4:4802820-4802839 None:intergenic 30.0%
GGAAAATTGTAGTTCGTAAT+AGG - chr3_4:4802904-4802923 None:intergenic 30.0%
TATGATTAGCAACAAACAGA+AGG - chr3_4:4803051-4803070 None:intergenic 30.0%
! CTCTTATTTCAGTTACTTCA+AGG + chr3_4:4803073-4803092 Msa0486770:intron 30.0%
ATTCTGCAAATATTCTTCAC+CGG + chr3_4:4803110-4803129 Msa0486770:CDS 30.0%
TGTAGTTAATCCAAAAACCA+AGG + chr3_4:4803410-4803429 Msa0486770:intron 30.0%
AAATCACTTCCCTATACAAA+GGG + chr3_4:4803441-4803460 Msa0486770:intron 30.0%
TGTAACAAATCAATGGCTAA+TGG - chr3_4:4803501-4803520 None:intergenic 30.0%
ATTGGGATAACAAGATGATT+AGG + chr3_4:4803659-4803678 Msa0486770:CDS 30.0%
TTGGGATAACAAGATGATTA+GGG + chr3_4:4803660-4803679 Msa0486770:CDS 30.0%
GTATAACAATGCTTTCTCCT+TGG - chr3_4:4801510-4801529 None:intergenic 35.0%
CTCATTGGTATCCATATTGA+TGG - chr3_4:4801619-4801638 None:intergenic 35.0%
TATGGATACCAATGAGAAAG+TGG + chr3_4:4801623-4801642 Msa0486770:CDS 35.0%
!! TGATGCTCTGAGAACTTTAA+GGG + chr3_4:4801683-4801702 Msa0486770:CDS 35.0%
TGAAGTTGCTTAGACATGTT+AGG + chr3_4:4801709-4801728 Msa0486770:CDS 35.0%
! GAGAATGTGATTGCTTTGAA+AGG + chr3_4:4801735-4801754 Msa0486770:CDS 35.0%
!!! GAGCAACTTTTTTCCTCTTA+TGG - chr3_4:4801812-4801831 None:intergenic 35.0%
ATGAATGAACTTCTTAGGCA+GGG - chr3_4:4801955-4801974 None:intergenic 35.0%
GATCCATGAATGAACTTCTT+AGG - chr3_4:4801960-4801979 None:intergenic 35.0%
AAGAAGTTCATTCATGGATC+CGG + chr3_4:4801960-4801979 Msa0486770:intron 35.0%
! CAAATGTATTCTTTTGACGC+CGG - chr3_4:4801982-4802001 None:intergenic 35.0%
TTGTGCTTATGCTAAATTGC+AGG + chr3_4:4802008-4802027 Msa0486770:intron 35.0%
GTATAACAATGCTTTCTCCT+TGG - chr3_4:4801510-4801529 None:intergenic 35.0%
CTCATTGGTATCCATATTGA+TGG - chr3_4:4801619-4801638 None:intergenic 35.0%
TATGGATACCAATGAGAAAG+TGG + chr3_4:4801623-4801642 Msa0486770:CDS 35.0%
!! TGATGCTCTGAGAACTTTAA+GGG + chr3_4:4801683-4801702 Msa0486770:CDS 35.0%
TGAAGTTGCTTAGACATGTT+AGG + chr3_4:4801709-4801728 Msa0486770:CDS 35.0%
TTGCAATGATCATTGGAAAG+TGG - chr3_4:4802421-4802440 None:intergenic 35.0%
GTAGAGTTTGCAATGATCAT+TGG - chr3_4:4802428-4802447 None:intergenic 35.0%
! ACAGTGTTTTATGTGGCATT+AGG + chr3_4:4802514-4802533 Msa0486770:intron 35.0%
! CAGTGTTTTATGTGGCATTA+GGG + chr3_4:4802515-4802534 Msa0486770:intron 35.0%
TTCCTTTAGTTGTCTGTGAT+TGG + chr3_4:4802712-4802731 Msa0486770:intron 35.0%
TACCAATCACAGACAACTAA+AGG - chr3_4:4802717-4802736 None:intergenic 35.0%
TGAAAACAATTGTCCCAAGT+TGG + chr3_4:4802803-4802822 Msa0486770:intron 35.0%
GAAAACAATTGTCCCAAGTT+GGG + chr3_4:4802804-4802823 Msa0486770:intron 35.0%
TTCTGCAAATATTCTTCACC+GGG + chr3_4:4803111-4803130 Msa0486770:CDS 35.0%
!! GAATAGTTTCATTTGGTGCA+TGG - chr3_4:4803352-4803371 None:intergenic 35.0%
!! TTGATGAACTCCTTGGTTTT+TGG - chr3_4:4803423-4803442 None:intergenic 35.0%
AAGTGATTTGATGAACTCCT+TGG - chr3_4:4803430-4803449 None:intergenic 35.0%
CAAATCACTTCCCTATACAA+AGG + chr3_4:4803440-4803459 Msa0486770:intron 35.0%
AATCACTTCCCTATACAAAG+GGG + chr3_4:4803442-4803461 Msa0486770:intron 35.0%
TTGCATAGATCAGCCATATA+TGG - chr3_4:4803583-4803602 None:intergenic 35.0%
CTGATCTATGCAATGATCAA+TGG + chr3_4:4803590-4803609 Msa0486770:CDS 35.0%
TCATCAATGTGAAGATTGAC+CGG - chr3_4:4803637-4803656 None:intergenic 35.0%
AGATGATTAGGGAAATGATG+TGG + chr3_4:4803671-4803690 Msa0486770:CDS 35.0%
GTATAACAATGCTTTCTCCT+TGG - chr3_4:4801510-4801529 None:intergenic 35.0%
CTCATTGGTATCCATATTGA+TGG - chr3_4:4801619-4801638 None:intergenic 35.0%
TATGGATACCAATGAGAAAG+TGG + chr3_4:4801623-4801642 Msa0486770:CDS 35.0%
!! TGATGCTCTGAGAACTTTAA+GGG + chr3_4:4801683-4801702 Msa0486770:CDS 35.0%
TGAAGTTGCTTAGACATGTT+AGG + chr3_4:4801709-4801728 Msa0486770:CDS 35.0%
! GAGAATGTGATTGCTTTGAA+AGG + chr3_4:4801735-4801754 Msa0486770:CDS 35.0%
!!! GAGCAACTTTTTTCCTCTTA+TGG - chr3_4:4801812-4801831 None:intergenic 35.0%
ATGAATGAACTTCTTAGGCA+GGG - chr3_4:4801955-4801974 None:intergenic 35.0%
GATCCATGAATGAACTTCTT+AGG - chr3_4:4801960-4801979 None:intergenic 35.0%
AAGAAGTTCATTCATGGATC+CGG + chr3_4:4801960-4801979 Msa0486770:intron 35.0%
! CAAATGTATTCTTTTGACGC+CGG - chr3_4:4801982-4802001 None:intergenic 35.0%
TTGTGCTTATGCTAAATTGC+AGG + chr3_4:4802008-4802027 Msa0486770:intron 35.0%
GTATAACAATGCTTTCTCCT+TGG - chr3_4:4801510-4801529 None:intergenic 35.0%
CTCATTGGTATCCATATTGA+TGG - chr3_4:4801619-4801638 None:intergenic 35.0%
TATGGATACCAATGAGAAAG+TGG + chr3_4:4801623-4801642 Msa0486770:CDS 35.0%
!! TGATGCTCTGAGAACTTTAA+GGG + chr3_4:4801683-4801702 Msa0486770:CDS 35.0%
TGAAGTTGCTTAGACATGTT+AGG + chr3_4:4801709-4801728 Msa0486770:CDS 35.0%
TTGCAATGATCATTGGAAAG+TGG - chr3_4:4802421-4802440 None:intergenic 35.0%
GTAGAGTTTGCAATGATCAT+TGG - chr3_4:4802428-4802447 None:intergenic 35.0%
! ACAGTGTTTTATGTGGCATT+AGG + chr3_4:4802514-4802533 Msa0486770:intron 35.0%
! CAGTGTTTTATGTGGCATTA+GGG + chr3_4:4802515-4802534 Msa0486770:intron 35.0%
TTCCTTTAGTTGTCTGTGAT+TGG + chr3_4:4802712-4802731 Msa0486770:intron 35.0%
TACCAATCACAGACAACTAA+AGG - chr3_4:4802717-4802736 None:intergenic 35.0%
TGAAAACAATTGTCCCAAGT+TGG + chr3_4:4802803-4802822 Msa0486770:intron 35.0%
GAAAACAATTGTCCCAAGTT+GGG + chr3_4:4802804-4802823 Msa0486770:intron 35.0%
TTCTGCAAATATTCTTCACC+GGG + chr3_4:4803111-4803130 Msa0486770:CDS 35.0%
!! GAATAGTTTCATTTGGTGCA+TGG - chr3_4:4803352-4803371 None:intergenic 35.0%
!! TTGATGAACTCCTTGGTTTT+TGG - chr3_4:4803423-4803442 None:intergenic 35.0%
AAGTGATTTGATGAACTCCT+TGG - chr3_4:4803430-4803449 None:intergenic 35.0%
CAAATCACTTCCCTATACAA+AGG + chr3_4:4803440-4803459 Msa0486770:intron 35.0%
AATCACTTCCCTATACAAAG+GGG + chr3_4:4803442-4803461 Msa0486770:intron 35.0%
TTGCATAGATCAGCCATATA+TGG - chr3_4:4803583-4803602 None:intergenic 35.0%
CTGATCTATGCAATGATCAA+TGG + chr3_4:4803590-4803609 Msa0486770:CDS 35.0%
TCATCAATGTGAAGATTGAC+CGG - chr3_4:4803637-4803656 None:intergenic 35.0%
AGATGATTAGGGAAATGATG+TGG + chr3_4:4803671-4803690 Msa0486770:CDS 35.0%
TATCGTCCAATCAAGCCTAT+TGG + chr3_4:4801564-4801583 Msa0486770:CDS 40.0%
!! CTTGATTGCCACTTTCTCAT+TGG - chr3_4:4801634-4801653 None:intergenic 40.0%
!! GTGATGCTCTGAGAACTTTA+AGG + chr3_4:4801682-4801701 Msa0486770:CDS 40.0%
!! TTCTTGCTTCTTTCGGGTTA+TGG - chr3_4:4801769-4801788 None:intergenic 40.0%
AAAAGTTGCTCAACCACCTT+TGG + chr3_4:4801821-4801840 Msa0486770:intron 40.0%
TGAATGAACTTCTTAGGCAG+GGG - chr3_4:4801954-4801973 None:intergenic 40.0%
CATGAATGAACTTCTTAGGC+AGG - chr3_4:4801956-4801975 None:intergenic 40.0%
CTGCCTAAGAAGTTCATTCA+TGG + chr3_4:4801954-4801973 Msa0486770:intron 40.0%
TATCGTCCAATCAAGCCTAT+TGG + chr3_4:4801564-4801583 Msa0486770:CDS 40.0%
!! CTTGATTGCCACTTTCTCAT+TGG - chr3_4:4801634-4801653 None:intergenic 40.0%
!! GTGATGCTCTGAGAACTTTA+AGG + chr3_4:4801682-4801701 Msa0486770:CDS 40.0%
CTACTAGGTCTATGAACTCA+TGG + chr3_4:4802360-4802379 Msa0486770:intron 40.0%
ATCATTGGAAAGTGGCTTAG+AGG - chr3_4:4802413-4802432 None:intergenic 40.0%
TTGCAAACTCTACTTAGCTC+AGG + chr3_4:4802435-4802454 Msa0486770:intron 40.0%
TAGCATCCTACTGACATAGT+TGG + chr3_4:4802745-4802764 Msa0486770:intron 40.0%
AAGAGTCCAACTATGTCAGT+AGG - chr3_4:4802754-4802773 None:intergenic 40.0%
! TATGTAATTTCGGGCTTGCT+CGG + chr3_4:4803182-4803201 Msa0486770:CDS 40.0%
CTCAGCAAAAATGCATCCAA+CGG - chr3_4:4803292-4803311 None:intergenic 40.0%
! TGCATTTTTGCTGAGATGCT+TGG + chr3_4:4803297-4803316 Msa0486770:intron 40.0%
!!! GGTGCATGGAATTTTTTCCA+GGG - chr3_4:4803338-4803357 None:intergenic 40.0%
!!! TGGTGCATGGAATTTTTTCC+AGG - chr3_4:4803339-4803358 None:intergenic 40.0%
CAAACTCAAGATCAGACTCT+TGG - chr3_4:4803392-4803411 None:intergenic 40.0%
AAGTGTGTCCCCTTTGTATA+GGG - chr3_4:4803453-4803472 None:intergenic 40.0%
GATCAGCCATATATGGATGT+CGG - chr3_4:4803576-4803595 None:intergenic 40.0%
TATCGTCCAATCAAGCCTAT+TGG + chr3_4:4801564-4801583 Msa0486770:CDS 40.0%
!! CTTGATTGCCACTTTCTCAT+TGG - chr3_4:4801634-4801653 None:intergenic 40.0%
!! GTGATGCTCTGAGAACTTTA+AGG + chr3_4:4801682-4801701 Msa0486770:CDS 40.0%
!! TTCTTGCTTCTTTCGGGTTA+TGG - chr3_4:4801769-4801788 None:intergenic 40.0%
AAAAGTTGCTCAACCACCTT+TGG + chr3_4:4801821-4801840 Msa0486770:intron 40.0%
TGAATGAACTTCTTAGGCAG+GGG - chr3_4:4801954-4801973 None:intergenic 40.0%
CATGAATGAACTTCTTAGGC+AGG - chr3_4:4801956-4801975 None:intergenic 40.0%
CTGCCTAAGAAGTTCATTCA+TGG + chr3_4:4801954-4801973 Msa0486770:intron 40.0%
TATCGTCCAATCAAGCCTAT+TGG + chr3_4:4801564-4801583 Msa0486770:CDS 40.0%
!! CTTGATTGCCACTTTCTCAT+TGG - chr3_4:4801634-4801653 None:intergenic 40.0%
!! GTGATGCTCTGAGAACTTTA+AGG + chr3_4:4801682-4801701 Msa0486770:CDS 40.0%
CTACTAGGTCTATGAACTCA+TGG + chr3_4:4802360-4802379 Msa0486770:intron 40.0%
ATCATTGGAAAGTGGCTTAG+AGG - chr3_4:4802413-4802432 None:intergenic 40.0%
TTGCAAACTCTACTTAGCTC+AGG + chr3_4:4802435-4802454 Msa0486770:intron 40.0%
TAGCATCCTACTGACATAGT+TGG + chr3_4:4802745-4802764 Msa0486770:intron 40.0%
AAGAGTCCAACTATGTCAGT+AGG - chr3_4:4802754-4802773 None:intergenic 40.0%
! TATGTAATTTCGGGCTTGCT+CGG + chr3_4:4803182-4803201 Msa0486770:CDS 40.0%
CTCAGCAAAAATGCATCCAA+CGG - chr3_4:4803292-4803311 None:intergenic 40.0%
! TGCATTTTTGCTGAGATGCT+TGG + chr3_4:4803297-4803316 Msa0486770:intron 40.0%
!!! GGTGCATGGAATTTTTTCCA+GGG - chr3_4:4803338-4803357 None:intergenic 40.0%
!!! TGGTGCATGGAATTTTTTCC+AGG - chr3_4:4803339-4803358 None:intergenic 40.0%
CAAACTCAAGATCAGACTCT+TGG - chr3_4:4803392-4803411 None:intergenic 40.0%
AAGTGTGTCCCCTTTGTATA+GGG - chr3_4:4803453-4803472 None:intergenic 40.0%
GATCAGCCATATATGGATGT+CGG - chr3_4:4803576-4803595 None:intergenic 40.0%
TGGAAGCCGCAATCAGAAAT+AGG + chr3_4:4801484-4801503 Msa0486770:CDS 45.0%
!! CCTTGGCCTATTTCTGATTG+CGG - chr3_4:4801493-4801512 None:intergenic 45.0%
GGTGTGCTCATCCATCAATA+TGG + chr3_4:4801605-4801624 Msa0486770:CDS 45.0%
! ACCTTTGGATCGAGTGTTGT+GGG + chr3_4:4801836-4801855 Msa0486770:intron 45.0%
TGGAAGCCGCAATCAGAAAT+AGG + chr3_4:4801484-4801503 Msa0486770:CDS 45.0%
!! CCTTGGCCTATTTCTGATTG+CGG - chr3_4:4801493-4801512 None:intergenic 45.0%
GGTGTGCTCATCCATCAATA+TGG + chr3_4:4801605-4801624 Msa0486770:CDS 45.0%
! GTTTTATGTGGCATTAGGGC+AGG + chr3_4:4802519-4802538 Msa0486770:intron 45.0%
! CAGGTGGGTTTCAAGGAATT+GGG + chr3_4:4802538-4802557 Msa0486770:intron 45.0%
! GCATTGACGTGCAGATTATC+AGG - chr3_4:4803145-4803164 None:intergenic 45.0%
! ATGTAATTTCGGGCTTGCTC+GGG + chr3_4:4803183-4803202 Msa0486770:CDS 45.0%
!! GCTCGGGAAAATCAAGTTGA+TGG + chr3_4:4803199-4803218 Msa0486770:CDS 45.0%
CCACATATCGATAGAAGCTC+TGG - chr3_4:4803268-4803287 None:intergenic 45.0%
CCAGAGCTTCTATCGATATG+TGG + chr3_4:4803265-4803284 Msa0486770:CDS 45.0%
TCTATCGATATGTGGTCCGT+TGG + chr3_4:4803273-4803292 Msa0486770:intron 45.0%
GGTAGAAAGCAAATCTTCCC+TGG + chr3_4:4803318-4803337 Msa0486770:intron 45.0%
GAAGTGTGTCCCCTTTGTAT+AGG - chr3_4:4803454-4803473 None:intergenic 45.0%
! TGGCTAATGGATCTGCTTGT+GGG - chr3_4:4803488-4803507 None:intergenic 45.0%
! ATGGCTAATGGATCTGCTTG+TGG - chr3_4:4803489-4803508 None:intergenic 45.0%
AGGACTCCGACATCCATATA+TGG + chr3_4:4803567-4803586 Msa0486770:CDS 45.0%
! TAACCGTCCTCTTCAAGTTC+CGG + chr3_4:4803615-4803634 Msa0486770:CDS 45.0%
AGATTGACCGGAACTTGAAG+AGG - chr3_4:4803625-4803644 None:intergenic 45.0%
TGACAAAAGCAGCTTCAGGA+TGG - chr3_4:4803714-4803733 None:intergenic 45.0%
! GCATTGACAAAAGCAGCTTC+AGG - chr3_4:4803718-4803737 None:intergenic 45.0%
TGGAAGCCGCAATCAGAAAT+AGG + chr3_4:4801484-4801503 Msa0486770:CDS 45.0%
!! CCTTGGCCTATTTCTGATTG+CGG - chr3_4:4801493-4801512 None:intergenic 45.0%
GGTGTGCTCATCCATCAATA+TGG + chr3_4:4801605-4801624 Msa0486770:CDS 45.0%
! ACCTTTGGATCGAGTGTTGT+GGG + chr3_4:4801836-4801855 Msa0486770:intron 45.0%
TGGAAGCCGCAATCAGAAAT+AGG + chr3_4:4801484-4801503 Msa0486770:CDS 45.0%
!! CCTTGGCCTATTTCTGATTG+CGG - chr3_4:4801493-4801512 None:intergenic 45.0%
GGTGTGCTCATCCATCAATA+TGG + chr3_4:4801605-4801624 Msa0486770:CDS 45.0%
! GTTTTATGTGGCATTAGGGC+AGG + chr3_4:4802519-4802538 Msa0486770:intron 45.0%
! CAGGTGGGTTTCAAGGAATT+GGG + chr3_4:4802538-4802557 Msa0486770:intron 45.0%
! GCATTGACGTGCAGATTATC+AGG - chr3_4:4803145-4803164 None:intergenic 45.0%
! ATGTAATTTCGGGCTTGCTC+GGG + chr3_4:4803183-4803202 Msa0486770:CDS 45.0%
!! GCTCGGGAAAATCAAGTTGA+TGG + chr3_4:4803199-4803218 Msa0486770:CDS 45.0%
CCACATATCGATAGAAGCTC+TGG - chr3_4:4803268-4803287 None:intergenic 45.0%
CCAGAGCTTCTATCGATATG+TGG + chr3_4:4803265-4803284 Msa0486770:CDS 45.0%
TCTATCGATATGTGGTCCGT+TGG + chr3_4:4803273-4803292 Msa0486770:intron 45.0%
GGTAGAAAGCAAATCTTCCC+TGG + chr3_4:4803318-4803337 Msa0486770:intron 45.0%
GAAGTGTGTCCCCTTTGTAT+AGG - chr3_4:4803454-4803473 None:intergenic 45.0%
! TGGCTAATGGATCTGCTTGT+GGG - chr3_4:4803488-4803507 None:intergenic 45.0%
! ATGGCTAATGGATCTGCTTG+TGG - chr3_4:4803489-4803508 None:intergenic 45.0%
AGGACTCCGACATCCATATA+TGG + chr3_4:4803567-4803586 Msa0486770:CDS 45.0%
! TAACCGTCCTCTTCAAGTTC+CGG + chr3_4:4803615-4803634 Msa0486770:CDS 45.0%
AGATTGACCGGAACTTGAAG+AGG - chr3_4:4803625-4803644 None:intergenic 45.0%
TGACAAAAGCAGCTTCAGGA+TGG - chr3_4:4803714-4803733 None:intergenic 45.0%
! GCATTGACAAAAGCAGCTTC+AGG - chr3_4:4803718-4803737 None:intergenic 45.0%
CCGCAATCAGAAATAGGCCA+AGG + chr3_4:4801490-4801509 Msa0486770:CDS 50.0%
CCATATGTTCCTCGGCCAAT+AGG - chr3_4:4801582-4801601 None:intergenic 50.0%
CCTATTGGCCGAGGAACATA+TGG + chr3_4:4801579-4801598 Msa0486770:CDS 50.0%
ACACCACGCCATATGTTCCT+CGG - chr3_4:4801590-4801609 None:intergenic 50.0%
CACAACACTCGATCCAAAGG+TGG - chr3_4:4801837-4801856 None:intergenic 50.0%
! CACCTTTGGATCGAGTGTTG+TGG + chr3_4:4801835-4801854 Msa0486770:intron 50.0%
TCCCACAACACTCGATCCAA+AGG - chr3_4:4801840-4801859 None:intergenic 50.0%
TGAACTTCTTAGGCAGGGGA+GGG - chr3_4:4801950-4801969 None:intergenic 50.0%
ATGAACTTCTTAGGCAGGGG+AGG - chr3_4:4801951-4801970 None:intergenic 50.0%
CCGCAATCAGAAATAGGCCA+AGG + chr3_4:4801490-4801509 Msa0486770:CDS 50.0%
CCATATGTTCCTCGGCCAAT+AGG - chr3_4:4801582-4801601 None:intergenic 50.0%
CCTATTGGCCGAGGAACATA+TGG + chr3_4:4801579-4801598 Msa0486770:CDS 50.0%
ACACCACGCCATATGTTCCT+CGG - chr3_4:4801590-4801609 None:intergenic 50.0%
TTATGTGGCATTAGGGCAGG+TGG + chr3_4:4802522-4802541 Msa0486770:intron 50.0%
TATGTGGCATTAGGGCAGGT+GGG + chr3_4:4802523-4802542 Msa0486770:intron 50.0%
! ATTAGGGCAGGTGGGTTTCA+AGG + chr3_4:4802531-4802550 Msa0486770:intron 50.0%
! GCAGGTGGGTTTCAAGGAAT+TGG + chr3_4:4802537-4802556 Msa0486770:intron 50.0%
GATTATCAGGCTTCAGGTCC+CGG - chr3_4:4803132-4803151 None:intergenic 50.0%
CGTGCAGATTATCAGGCTTC+AGG - chr3_4:4803138-4803157 None:intergenic 50.0%
CAGAGTATGTTGTCACGTGC+TGG + chr3_4:4803233-4803252 Msa0486770:CDS 50.0%
TGACCGGAACTTGAAGAGGA+CGG - chr3_4:4803621-4803640 None:intergenic 50.0%
CCGCAATCAGAAATAGGCCA+AGG + chr3_4:4801490-4801509 Msa0486770:CDS 50.0%
CCATATGTTCCTCGGCCAAT+AGG - chr3_4:4801582-4801601 None:intergenic 50.0%
CCTATTGGCCGAGGAACATA+TGG + chr3_4:4801579-4801598 Msa0486770:CDS 50.0%
ACACCACGCCATATGTTCCT+CGG - chr3_4:4801590-4801609 None:intergenic 50.0%
CACAACACTCGATCCAAAGG+TGG - chr3_4:4801837-4801856 None:intergenic 50.0%
! CACCTTTGGATCGAGTGTTG+TGG + chr3_4:4801835-4801854 Msa0486770:intron 50.0%
TCCCACAACACTCGATCCAA+AGG - chr3_4:4801840-4801859 None:intergenic 50.0%
TGAACTTCTTAGGCAGGGGA+GGG - chr3_4:4801950-4801969 None:intergenic 50.0%
ATGAACTTCTTAGGCAGGGG+AGG - chr3_4:4801951-4801970 None:intergenic 50.0%
CCGCAATCAGAAATAGGCCA+AGG + chr3_4:4801490-4801509 Msa0486770:CDS 50.0%
CCATATGTTCCTCGGCCAAT+AGG - chr3_4:4801582-4801601 None:intergenic 50.0%
CCTATTGGCCGAGGAACATA+TGG + chr3_4:4801579-4801598 Msa0486770:CDS 50.0%
ACACCACGCCATATGTTCCT+CGG - chr3_4:4801590-4801609 None:intergenic 50.0%
TTATGTGGCATTAGGGCAGG+TGG + chr3_4:4802522-4802541 Msa0486770:intron 50.0%
TATGTGGCATTAGGGCAGGT+GGG + chr3_4:4802523-4802542 Msa0486770:intron 50.0%
! ATTAGGGCAGGTGGGTTTCA+AGG + chr3_4:4802531-4802550 Msa0486770:intron 50.0%
! GCAGGTGGGTTTCAAGGAAT+TGG + chr3_4:4802537-4802556 Msa0486770:intron 50.0%
GATTATCAGGCTTCAGGTCC+CGG - chr3_4:4803132-4803151 None:intergenic 50.0%
CGTGCAGATTATCAGGCTTC+AGG - chr3_4:4803138-4803157 None:intergenic 50.0%
CAGAGTATGTTGTCACGTGC+TGG + chr3_4:4803233-4803252 Msa0486770:CDS 50.0%
TGACCGGAACTTGAAGAGGA+CGG - chr3_4:4803621-4803640 None:intergenic 50.0%
CCTCGGCCAATAGGCTTGAT+TGG - chr3_4:4801573-4801592 None:intergenic 55.0%
CCAATCAAGCCTATTGGCCG+AGG + chr3_4:4801570-4801589 Msa0486770:CDS 55.0%
CCTCGGCCAATAGGCTTGAT+TGG - chr3_4:4801573-4801592 None:intergenic 55.0%
CCAATCAAGCCTATTGGCCG+AGG + chr3_4:4801570-4801589 Msa0486770:CDS 55.0%
!! GAGTGCATGAAGCGCTGAGT+CGG + chr3_4:4802594-4802613 Msa0486770:intron 55.0%
CCTCGGCCAATAGGCTTGAT+TGG - chr3_4:4801573-4801592 None:intergenic 55.0%
CCAATCAAGCCTATTGGCCG+AGG + chr3_4:4801570-4801589 Msa0486770:CDS 55.0%
CCTCGGCCAATAGGCTTGAT+TGG - chr3_4:4801573-4801592 None:intergenic 55.0%
CCAATCAAGCCTATTGGCCG+AGG + chr3_4:4801570-4801589 Msa0486770:CDS 55.0%
!! GAGTGCATGAAGCGCTGAGT+CGG + chr3_4:4802594-4802613 Msa0486770:intron 55.0%
TGGCCGAGGAACATATGGCG+TGG + chr3_4:4801584-4801603 Msa0486770:CDS 60.0%
TGGCCGAGGAACATATGGCG+TGG + chr3_4:4801584-4801603 Msa0486770:CDS 60.0%
TGGCCGAGGAACATATGGCG+TGG + chr3_4:4801584-4801603 Msa0486770:CDS 60.0%
TGGCCGAGGAACATATGGCG+TGG + chr3_4:4801584-4801603 Msa0486770:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 4801471 4803741 4801471 ID=Msa0486770;Name=Msa0486770
chr3_4 mRNA 4801471 4803741 4801471 ID=Msa0486770-mRNA-1;Parent=Msa0486770;Name=Msa0486770-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|1|1|4|0|318
chr3_4 exon 4801471 4801756 4801471 ID=Msa0486770-mRNA-1:exon:1853;Parent=Msa0486770-mRNA-1
chr3_4 exon 4802030 4802322 4802030 ID=Msa0486770-mRNA-1:exon:1854;Parent=Msa0486770-mRNA-1
chr3_4 exon 4803085 4803286 4803085 ID=Msa0486770-mRNA-1:exon:1855;Parent=Msa0486770-mRNA-1
chr3_4 exon 4803566 4803741 4803566 ID=Msa0486770-mRNA-1:exon:1856;Parent=Msa0486770-mRNA-1
chr3_4 CDS 4801471 4801756 4801471 ID=Msa0486770-mRNA-1:cds;Parent=Msa0486770-mRNA-1
chr3_4 CDS 4802030 4802322 4802030 ID=Msa0486770-mRNA-1:cds;Parent=Msa0486770-mRNA-1
chr3_4 CDS 4803085 4803286 4803085 ID=Msa0486770-mRNA-1:cds;Parent=Msa0486770-mRNA-1
chr3_4 CDS 4803566 4803741 4803566 ID=Msa0486770-mRNA-1:cds;Parent=Msa0486770-mRNA-1
Gene Sequence

>Msa0486770

ATGACAACTTTAGTGGAAGCCGCAATCAGAAATAGGCCAAGGAGAAAGCATTGTTATACAATGTGGGAAACATTGTATGATATTCATACAAAGTATCGTCCAATCAAGCCTATTGGCCGAGGAACATATGGCGTGGTGTGCTCATCCATCAATATGGATACCAATGAGAAAGTGGCAATCAAGAAGATTAGAAACTTATTTGATGATTATGGTGATGCTCTGAGAACTTTAAGGGAGATGAAGTTGCTTAGACATGTTAGGCATGAGAATGTGATTGCTTTGAAAGGAATAATGACAACTTTAGTGGAAGCCGCAATCAGAAATAGGCCAAGGAGAAAGCATTGTTATACAATGTGGGAAACATTGTATGATATTCATACAAAGTATCGTCCAATCAAGCCTATTGGCCGAGGAACATATGGCGTGGTGTGCTCATCCATCAATATGGATACCAATGAGAAAGTGGCAATCAAGAAGATTAGAAACTTATTTGATGATTATGGTGATGCTCTGAGAACTTTAAGGGAGATGAAGTTGCTTAGACATGTTAGGCATGAGAATGTGATTGCTTTGAAAGATTTACTTCAAGGTCTTAATTATCTTCATTCTGCAAATATTCTTCACCGGGACCTGAAGCCTGATAATCTGCACGTCAATGCAAATTGTGATTTGAAGATATGTAATTTCGGGCTTGCTCGGGAAAATCAAGTTGATGGCGAGATTATGACAGAGTATGTTGTCACGTGCTGGTATCGAGTTCCAGAGCTTCTATCGATATGTGAAGGACTCCGACATCCATATATGGCTGATCTATGCAATGATCAATGGCGTAACCGTCCTCTTCAAGTTCCGGTCAATCTTCACATTGATGAAAATTGGGATAACAAGATGATTAGGGAAATGATGTGGAATGAGATGCTTCATTACCATCCTGAAGCTGCTTTTGTCAATGCATAG
Protein sequence

>Msa0486770

MTTLVEAAIRNRPRRKHCYTMWETLYDIHTKYRPIKPIGRGTYGVVCSSINMDTNEKVAIKKIRNLFDDYGDALRTLREMKLLRHVRHENVIALKGIMTTLVEAAIRNRPRRKHCYTMWETLYDIHTKYRPIKPIGRGTYGVVCSSINMDTNEKVAIKKIRNLFDDYGDALRTLREMKLLRHVRHENVIALKDLLQGLNYLHSANILHRDLKPDNLHVNANCDLKICNFGLARENQVDGEIMTEYVVTCWYRVPELLSICEGLRHPYMADLCNDQWRNRPLQVPVNLHIDENWDNKMIREMMWNEMLHYHPEAAFVNA*