Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0487730 | XP_039688376.1 | 44.904 | 677 | 247 | 16 | 267 | 821 | 22 | 694 | 1.03e-160 | 502 |
Msa0487730 | XP_039688376.1 | 46.966 | 445 | 172 | 13 | 16 | 433 | 232 | 639 | 3.25e-102 | 348 |
Msa0487730 | XP_039688376.1 | 48.204 | 724 | 252 | 17 | 432 | 1080 | 22 | 697 | 0.0 | 574 |
Msa0487730 | XP_039688376.1 | 54.783 | 230 | 83 | 6 | 34 | 243 | 466 | 694 | 1.16e-55 | 218 |
Msa0487730 | XP_039688376.1 | 72.772 | 606 | 86 | 11 | 36 | 579 | 22 | 610 | 0.0 | 840 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0487730 | sp|Q8L3W1|VRN1_ARATH | 38.983 | 118 | 71 | 1 | 417 | 534 | 6 | 122 | 1.54e-20 | 97.8 |
Msa0487730 | sp|Q8L3W1|VRN1_ARATH | 41.489 | 94 | 55 | 0 | 252 | 345 | 6 | 99 | 1.75e-18 | 91.7 |
Msa0487730 | sp|Q8L3W1|VRN1_ARATH | 38.384 | 99 | 57 | 1 | 21 | 115 | 6 | 104 | 3.86e-15 | 81.6 |
Msa0487730 | sp|Q8L3W1|VRN1_ARATH | 37.374 | 99 | 58 | 1 | 598 | 692 | 6 | 104 | 1.83e-14 | 79.7 |
Msa0487730 | sp|Q8L3W1|VRN1_ARATH | 35.227 | 88 | 57 | 0 | 830 | 917 | 6 | 93 | 1.62e-12 | 73.6 |
Msa0487730 | sp|Q8L3W1|VRN1_ARATH | 34.783 | 161 | 84 | 5 | 927 | 1079 | 194 | 341 | 1.16e-11 | 71.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0487730 | G7IYE8 | 44.322 | 273 | 110 | 4 | 807 | 1068 | 2 | 243 | 6.42e-55 | 211 |
Msa0487730 | G7IYE8 | 51.351 | 259 | 88 | 8 | 16 | 237 | 257 | 514 | 1.70e-60 | 227 |
Msa0487730 | G7IYE8 | 58.011 | 181 | 47 | 3 | 400 | 573 | 6 | 164 | 6.46e-51 | 199 |
Msa0487730 | G7IYE8 | 66.092 | 174 | 53 | 2 | 412 | 579 | 257 | 430 | 1.80e-61 | 229 |
Msa0487730 | G7IYE8 | 76.943 | 386 | 73 | 5 | 1 | 370 | 1 | 386 | 0.0 | 583 |
Msa0487730 | G7IYE8 | 77.351 | 521 | 96 | 6 | 581 | 1080 | 4 | 523 | 0.0 | 789 |
Gene ID | Type | Classification |
---|---|---|
Msa0487730 | TF | B3 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0487730 | MtrunA17_Chr3g0077411 | 77.351 | 521 | 96 | 6 | 581 | 1080 | 4 | 523 | 0.0 | 789 |
Msa0487730 | MtrunA17_Chr3g0077411 | 76.943 | 386 | 73 | 5 | 1 | 370 | 1 | 386 | 0.0 | 583 |
Msa0487730 | MtrunA17_Chr3g0077411 | 66.092 | 174 | 53 | 2 | 412 | 579 | 257 | 430 | 3.47e-65 | 229 |
Msa0487730 | MtrunA17_Chr3g0077411 | 51.351 | 259 | 88 | 8 | 16 | 237 | 257 | 514 | 3.28e-64 | 227 |
Msa0487730 | MtrunA17_Chr3g0077411 | 44.322 | 273 | 110 | 4 | 807 | 1068 | 2 | 243 | 1.24e-58 | 211 |
Msa0487730 | MtrunA17_Chr3g0077411 | 58.011 | 181 | 47 | 3 | 400 | 573 | 6 | 164 | 1.24e-54 | 199 |
Msa0487730 | MtrunA17_Chr3g0077461 | 82.400 | 375 | 47 | 5 | 36 | 398 | 22 | 389 | 0.0 | 623 |
Msa0487730 | MtrunA17_Chr3g0077461 | 62.474 | 477 | 129 | 9 | 614 | 1072 | 23 | 467 | 0.0 | 548 |
Msa0487730 | MtrunA17_Chr3g0077461 | 45.516 | 446 | 178 | 12 | 432 | 814 | 22 | 465 | 4.40e-99 | 321 |
Msa0487730 | MtrunA17_Chr3g0077461 | 43.766 | 393 | 144 | 8 | 267 | 585 | 22 | 411 | 1.46e-89 | 295 |
Msa0487730 | MtrunA17_Chr3g0077461 | 49.789 | 237 | 100 | 6 | 16 | 236 | 232 | 465 | 3.70e-57 | 205 |
Msa0487730 | MtrunA17_Chr3g0077461 | 42.449 | 245 | 91 | 5 | 845 | 1077 | 22 | 228 | 2.14e-47 | 176 |
Msa0487730 | MtrunA17_Chr3g0077361 | 59.109 | 516 | 162 | 6 | 582 | 1080 | 24 | 507 | 0.0 | 562 |
Msa0487730 | MtrunA17_Chr3g0077361 | 62.887 | 388 | 96 | 6 | 1 | 370 | 20 | 377 | 8.30e-148 | 451 |
Msa0487730 | MtrunA17_Chr3g0077361 | 46.753 | 231 | 110 | 5 | 16 | 243 | 284 | 504 | 8.45e-50 | 184 |
Msa0487730 | MtrunA17_Chr3g0077361 | 56.548 | 168 | 43 | 1 | 412 | 579 | 284 | 421 | 1.87e-49 | 184 |
Msa0487730 | MtrunA17_Chr3g0077361 | 54.054 | 185 | 57 | 3 | 401 | 579 | 24 | 186 | 1.25e-47 | 178 |
Msa0487730 | MtrunA17_Chr4g0009491 | 57.647 | 425 | 153 | 4 | 612 | 1019 | 11 | 425 | 2.75e-146 | 444 |
Msa0487730 | MtrunA17_Chr4g0009491 | 65.230 | 348 | 99 | 6 | 35 | 370 | 11 | 348 | 2.21e-143 | 437 |
Msa0487730 | MtrunA17_Chr4g0009491 | 43.437 | 419 | 160 | 8 | 431 | 773 | 11 | 428 | 9.90e-90 | 295 |
Msa0487730 | MtrunA17_Chr4g0009491 | 62.500 | 184 | 64 | 1 | 401 | 579 | 209 | 392 | 5.11e-64 | 223 |
Msa0487730 | MtrunA17_Chr4g0009491 | 51.707 | 205 | 70 | 4 | 16 | 191 | 220 | 424 | 5.94e-53 | 192 |
Msa0487730 | MtrunA17_Chr4g0009491 | 46.606 | 221 | 77 | 4 | 844 | 1053 | 11 | 201 | 2.62e-48 | 178 |
Msa0487730 | MtrunA17_Chr3g0077381 | 56.422 | 436 | 133 | 7 | 612 | 1019 | 34 | 440 | 6.98e-141 | 431 |
Msa0487730 | MtrunA17_Chr3g0077381 | 63.231 | 359 | 87 | 7 | 35 | 370 | 34 | 370 | 1.21e-136 | 420 |
Msa0487730 | MtrunA17_Chr3g0077381 | 43.649 | 433 | 131 | 10 | 431 | 773 | 34 | 443 | 2.41e-93 | 305 |
Msa0487730 | MtrunA17_Chr3g0077381 | 58.065 | 186 | 73 | 1 | 401 | 581 | 231 | 416 | 4.87e-58 | 207 |
Msa0487730 | MtrunA17_Chr3g0077381 | 50.980 | 204 | 66 | 4 | 16 | 191 | 242 | 439 | 1.58e-50 | 185 |
Msa0487730 | MtrunA17_Chr5g0429931 | 59.919 | 247 | 80 | 2 | 845 | 1080 | 10 | 248 | 3.76e-91 | 291 |
Msa0487730 | MtrunA17_Chr5g0429931 | 54.132 | 242 | 81 | 5 | 31 | 243 | 5 | 245 | 3.54e-68 | 229 |
Msa0487730 | MtrunA17_Chr5g0429931 | 54.237 | 236 | 79 | 4 | 614 | 821 | 11 | 245 | 7.56e-66 | 222 |
Msa0487730 | MtrunA17_Chr5g0429931 | 67.516 | 157 | 46 | 1 | 427 | 578 | 5 | 161 | 1.66e-61 | 210 |
Msa0487730 | MtrunA17_Chr5g0429931 | 66.667 | 114 | 33 | 1 | 262 | 370 | 5 | 118 | 1.01e-44 | 162 |
Msa0487730 | MtrunA17_Chr3g0077451 | 59.036 | 249 | 72 | 4 | 844 | 1080 | 10 | 240 | 1.92e-84 | 273 |
Msa0487730 | MtrunA17_Chr3g0077451 | 79.221 | 154 | 17 | 2 | 431 | 579 | 10 | 153 | 1.39e-73 | 243 |
Msa0487730 | MtrunA17_Chr3g0077451 | 55.459 | 229 | 82 | 5 | 612 | 821 | 10 | 237 | 2.60e-68 | 229 |
Msa0487730 | MtrunA17_Chr3g0077451 | 55.459 | 229 | 81 | 6 | 35 | 243 | 10 | 237 | 6.99e-65 | 219 |
Msa0487730 | MtrunA17_Chr3g0077451 | 62.791 | 129 | 41 | 2 | 266 | 387 | 10 | 138 | 1.25e-45 | 164 |
Msa0487730 | MtrunA17_Chr3g0077431 | 57.991 | 219 | 62 | 4 | 874 | 1080 | 1 | 201 | 5.66e-71 | 234 |
Msa0487730 | MtrunA17_Chr3g0077431 | 76.613 | 124 | 14 | 2 | 461 | 579 | 1 | 114 | 2.57e-54 | 187 |
Msa0487730 | MtrunA17_Chr3g0077431 | 51.759 | 199 | 76 | 5 | 642 | 821 | 1 | 198 | 1.29e-50 | 177 |
Msa0487730 | MtrunA17_Chr3g0077431 | 52.764 | 199 | 73 | 6 | 65 | 243 | 1 | 198 | 1.37e-48 | 171 |
Msa0487730 | MtrunA17_Chr3g0077431 | 59.596 | 99 | 33 | 2 | 296 | 387 | 1 | 99 | 7.07e-30 | 117 |
Msa0487730 | MtrunA17_Chr3g0077421 | 56.944 | 216 | 66 | 3 | 874 | 1078 | 1 | 200 | 6.24e-69 | 229 |
Msa0487730 | MtrunA17_Chr3g0077421 | 78.226 | 124 | 12 | 2 | 461 | 579 | 1 | 114 | 1.11e-55 | 191 |
Msa0487730 | MtrunA17_Chr3g0077421 | 51.000 | 200 | 76 | 6 | 65 | 243 | 1 | 199 | 2.89e-46 | 165 |
Msa0487730 | MtrunA17_Chr3g0077421 | 48.276 | 203 | 84 | 5 | 642 | 824 | 1 | 202 | 5.16e-45 | 161 |
Msa0487730 | MtrunA17_Chr3g0077421 | 58.586 | 99 | 34 | 2 | 296 | 387 | 1 | 99 | 1.14e-27 | 111 |
Msa0487730 | MtrunA17_Chr3g0077441 | 56.944 | 216 | 66 | 3 | 874 | 1078 | 1 | 200 | 6.24e-69 | 229 |
Msa0487730 | MtrunA17_Chr3g0077441 | 78.226 | 124 | 12 | 2 | 461 | 579 | 1 | 114 | 1.11e-55 | 191 |
Msa0487730 | MtrunA17_Chr3g0077441 | 51.000 | 200 | 76 | 6 | 65 | 243 | 1 | 199 | 2.89e-46 | 165 |
Msa0487730 | MtrunA17_Chr3g0077441 | 48.276 | 203 | 84 | 5 | 642 | 824 | 1 | 202 | 5.16e-45 | 161 |
Msa0487730 | MtrunA17_Chr3g0077441 | 58.586 | 99 | 34 | 2 | 296 | 387 | 1 | 99 | 1.14e-27 | 111 |
Msa0487730 | MtrunA17_Chr1g0162441 | 51.087 | 92 | 45 | 0 | 417 | 508 | 7 | 98 | 1.26e-24 | 108 |
Msa0487730 | MtrunA17_Chr1g0162441 | 42.727 | 110 | 63 | 0 | 252 | 361 | 7 | 116 | 8.07e-23 | 102 |
Msa0487730 | MtrunA17_Chr1g0162441 | 42.424 | 99 | 53 | 1 | 598 | 692 | 7 | 105 | 9.00e-20 | 93.6 |
Msa0487730 | MtrunA17_Chr1g0162441 | 40.367 | 109 | 60 | 2 | 21 | 124 | 7 | 115 | 2.30e-19 | 92.4 |
Msa0487730 | MtrunA17_Chr1g0162441 | 36.364 | 88 | 56 | 0 | 830 | 917 | 7 | 94 | 1.03e-15 | 80.9 |
Msa0487730 | MtrunA17_Chr1g0162441 | 35.036 | 137 | 72 | 4 | 945 | 1075 | 268 | 393 | 1.68e-11 | 67.8 |
Msa0487730 | MtrunA17_Chr1g0154071 | 28.405 | 257 | 146 | 6 | 251 | 507 | 27 | 245 | 6.59e-22 | 100 |
Msa0487730 | MtrunA17_Chr1g0154071 | 37.234 | 94 | 58 | 1 | 414 | 507 | 25 | 117 | 4.80e-11 | 66.6 |
Msa0487730 | MtrunA17_Chr4g0033961 | 43.478 | 92 | 52 | 0 | 417 | 508 | 6 | 97 | 4.88e-21 | 97.4 |
Msa0487730 | MtrunA17_Chr4g0033961 | 41.053 | 95 | 56 | 0 | 249 | 343 | 3 | 97 | 4.17e-19 | 91.7 |
Msa0487730 | MtrunA17_Chr4g0033961 | 37.273 | 110 | 65 | 1 | 595 | 700 | 3 | 112 | 3.79e-17 | 85.5 |
Msa0487730 | MtrunA17_Chr4g0033961 | 36.364 | 110 | 66 | 1 | 18 | 123 | 3 | 112 | 1.36e-16 | 83.6 |
Msa0487730 | MtrunA17_Chr4g0033961 | 33.333 | 123 | 66 | 2 | 827 | 938 | 3 | 120 | 4.23e-14 | 75.9 |
Msa0487730 | MtrunA17_Chr4g0033961 | 34.532 | 139 | 74 | 4 | 945 | 1077 | 264 | 391 | 1.01e-11 | 68.6 |
Msa0487730 | MtrunA17_Chr1g0162411 | 47.778 | 90 | 47 | 0 | 417 | 506 | 7 | 96 | 5.74e-21 | 97.4 |
Msa0487730 | MtrunA17_Chr1g0162411 | 44.444 | 90 | 50 | 0 | 252 | 341 | 7 | 96 | 8.16e-19 | 90.9 |
Msa0487730 | MtrunA17_Chr1g0162411 | 39.815 | 108 | 60 | 2 | 21 | 124 | 7 | 113 | 3.31e-15 | 79.7 |
Msa0487730 | MtrunA17_Chr1g0162411 | 38.384 | 99 | 55 | 2 | 598 | 692 | 7 | 103 | 2.48e-14 | 77.0 |
Msa0487730 | MtrunA17_Chr1g0162411 | 36.145 | 83 | 53 | 0 | 830 | 912 | 7 | 89 | 7.71e-14 | 75.5 |
Msa0487730 | MtrunA17_Chr3g0131891 | 27.027 | 296 | 162 | 9 | 829 | 1077 | 18 | 306 | 3.22e-20 | 93.2 |
Msa0487730 | MtrunA17_Chr3g0131891 | 27.759 | 299 | 147 | 12 | 14 | 245 | 12 | 308 | 1.61e-17 | 85.1 |
Msa0487730 | MtrunA17_Chr3g0131891 | 30.412 | 194 | 100 | 7 | 416 | 576 | 18 | 209 | 5.38e-17 | 83.6 |
Msa0487730 | MtrunA17_Chr3g0131891 | 23.920 | 301 | 157 | 10 | 591 | 823 | 12 | 308 | 4.43e-16 | 80.9 |
Msa0487730 | MtrunA17_Chr3g0131891 | 26.421 | 299 | 163 | 10 | 251 | 506 | 18 | 302 | 4.76e-16 | 80.9 |
Msa0487730 | MtrunA17_Chr5g0421851 | 35.329 | 167 | 89 | 4 | 918 | 1078 | 34 | 187 | 3.43e-20 | 89.7 |
Msa0487730 | MtrunA17_Chr5g0421921 | 42.017 | 119 | 60 | 2 | 960 | 1078 | 3 | 112 | 1.07e-19 | 85.9 |
Msa0487730 | MtrunA17_Chr5g0421731 | 42.017 | 119 | 60 | 2 | 960 | 1078 | 3 | 112 | 1.07e-19 | 85.9 |
Msa0487730 | MtrunA17_Chr7g0233561 | 34.752 | 141 | 78 | 3 | 416 | 542 | 17 | 157 | 2.50e-18 | 87.8 |
Msa0487730 | MtrunA17_Chr7g0233561 | 36.207 | 116 | 66 | 2 | 20 | 127 | 17 | 132 | 8.19e-16 | 80.1 |
Msa0487730 | MtrunA17_Chr7g0233561 | 31.034 | 116 | 72 | 2 | 597 | 704 | 17 | 132 | 2.11e-12 | 69.7 |
Msa0487730 | MtrunA17_Chr7g0233561 | 31.356 | 118 | 76 | 1 | 251 | 363 | 17 | 134 | 3.00e-12 | 69.3 |
Msa0487730 | MtrunA17_Chr5g0419201 | 36.264 | 91 | 58 | 0 | 417 | 507 | 16 | 106 | 5.72e-17 | 80.5 |
Msa0487730 | MtrunA17_Chr5g0419201 | 39.560 | 91 | 55 | 0 | 252 | 342 | 16 | 106 | 1.59e-16 | 79.0 |
Msa0487730 | MtrunA17_Chr5g0419201 | 34.711 | 121 | 74 | 2 | 21 | 136 | 16 | 136 | 9.37e-16 | 77.0 |
Msa0487730 | MtrunA17_Chr5g0419201 | 33.333 | 99 | 62 | 1 | 598 | 692 | 16 | 114 | 2.74e-13 | 69.7 |
Msa0487730 | MtrunA17_Chr5g0419201 | 27.907 | 172 | 102 | 4 | 823 | 983 | 9 | 169 | 2.58e-11 | 63.9 |
Msa0487730 | MtrunA17_Chr3g0103151 | 43.956 | 91 | 49 | 1 | 416 | 506 | 11 | 99 | 6.04e-17 | 79.3 |
Msa0487730 | MtrunA17_Chr3g0103151 | 40.000 | 100 | 54 | 2 | 20 | 115 | 11 | 108 | 1.07e-14 | 72.8 |
Msa0487730 | MtrunA17_Chr3g0103151 | 38.462 | 91 | 54 | 1 | 251 | 341 | 11 | 99 | 5.01e-13 | 68.2 |
Msa0487730 | MtrunA17_Chr3g0103151 | 38.000 | 100 | 56 | 2 | 597 | 692 | 11 | 108 | 7.43e-13 | 67.8 |
Msa0487730 | MtrunA17_Chr3g0103191 | 27.650 | 217 | 117 | 6 | 401 | 587 | 3 | 209 | 6.24e-17 | 82.0 |
Msa0487730 | MtrunA17_Chr3g0103191 | 39.000 | 100 | 55 | 2 | 21 | 116 | 12 | 109 | 1.05e-12 | 69.3 |
Msa0487730 | MtrunA17_Chr3g0103191 | 28.767 | 219 | 127 | 6 | 252 | 448 | 12 | 223 | 4.46e-12 | 67.4 |
Msa0487730 | MtrunA17_Chr3g0103191 | 39.394 | 99 | 54 | 2 | 598 | 692 | 12 | 108 | 6.98e-12 | 67.0 |
Msa0487730 | MtrunA17_Chr8g0390841 | 22.332 | 506 | 300 | 17 | 390 | 810 | 14 | 511 | 1.40e-16 | 84.3 |
Msa0487730 | MtrunA17_Chr8g0390841 | 20.905 | 464 | 302 | 16 | 252 | 662 | 39 | 490 | 2.74e-13 | 73.9 |
Msa0487730 | MtrunA17_Chr8g0390841 | 21.512 | 516 | 316 | 21 | 35 | 509 | 53 | 520 | 4.94e-13 | 73.2 |
Msa0487730 | MtrunA17_Chr7g0233521 | 26.374 | 273 | 152 | 7 | 846 | 1077 | 2 | 266 | 1.54e-16 | 81.3 |
Msa0487730 | MtrunA17_Chr7g0233521 | 28.814 | 177 | 98 | 4 | 433 | 582 | 2 | 177 | 4.08e-15 | 77.0 |
Msa0487730 | MtrunA17_Chr7g0233521 | 36.047 | 86 | 51 | 1 | 37 | 118 | 2 | 87 | 7.12e-13 | 70.5 |
Msa0487730 | MtrunA17_Chr7g0233521 | 34.884 | 86 | 52 | 1 | 614 | 695 | 2 | 87 | 7.12e-13 | 70.5 |
Msa0487730 | MtrunA17_Chr7g0233521 | 34.021 | 97 | 59 | 1 | 268 | 359 | 2 | 98 | 7.34e-11 | 64.3 |
Msa0487730 | MtrunA17_Chr1g0162421 | 50.000 | 58 | 29 | 0 | 431 | 488 | 7 | 64 | 4.54e-16 | 73.6 |
Msa0487730 | MtrunA17_Chr1g0162421 | 45.455 | 55 | 30 | 0 | 35 | 89 | 7 | 61 | 1.66e-13 | 66.2 |
Msa0487730 | MtrunA17_Chr1g0162421 | 47.170 | 53 | 28 | 0 | 614 | 666 | 9 | 61 | 3.23e-13 | 65.5 |
Msa0487730 | MtrunA17_Chr1g0162421 | 43.103 | 58 | 33 | 0 | 266 | 323 | 7 | 64 | 2.69e-12 | 62.8 |
Msa0487730 | MtrunA17_Chr1g0162421 | 39.655 | 58 | 35 | 0 | 844 | 901 | 7 | 64 | 9.72e-11 | 58.5 |
Msa0487730 | MtrunA17_Chr3g0103181 | 30.500 | 200 | 108 | 7 | 416 | 588 | 11 | 206 | 1.24e-15 | 78.6 |
Msa0487730 | MtrunA17_Chr3g0103181 | 40.594 | 101 | 54 | 2 | 20 | 116 | 11 | 109 | 3.96e-14 | 74.3 |
Msa0487730 | MtrunA17_Chr3g0103181 | 39.000 | 100 | 55 | 2 | 597 | 692 | 11 | 108 | 4.11e-13 | 71.2 |
Msa0487730 | MtrunA17_Chr3g0103181 | 30.061 | 163 | 86 | 5 | 251 | 408 | 11 | 150 | 4.85e-12 | 67.8 |
Msa0487730 | MtrunA17_Chr1g0163221 | 26.174 | 298 | 177 | 10 | 251 | 514 | 10 | 298 | 1.26e-15 | 80.1 |
Msa0487730 | MtrunA17_Chr7g0233571 | 36.957 | 92 | 58 | 0 | 416 | 507 | 9 | 100 | 4.48e-15 | 75.9 |
Msa0487730 | MtrunA17_Chr7g0233571 | 34.951 | 103 | 63 | 1 | 597 | 695 | 9 | 111 | 1.03e-14 | 74.7 |
Msa0487730 | MtrunA17_Chr7g0233571 | 30.612 | 147 | 90 | 2 | 251 | 397 | 9 | 143 | 2.08e-14 | 73.9 |
Msa0487730 | MtrunA17_Chr7g0233571 | 35.000 | 100 | 61 | 1 | 20 | 115 | 9 | 108 | 5.84e-14 | 72.4 |
Msa0487730 | MtrunA17_Chr7g0233571 | 29.600 | 125 | 77 | 1 | 829 | 942 | 9 | 133 | 7.55e-12 | 66.2 |
Msa0487730 | MtrunA17_Chr7g0233531 | 27.106 | 273 | 150 | 9 | 846 | 1077 | 2 | 266 | 7.33e-15 | 76.3 |
Msa0487730 | MtrunA17_Chr7g0233531 | 29.379 | 177 | 96 | 6 | 433 | 582 | 2 | 176 | 1.34e-11 | 66.6 |
Msa0487730 | MtrunA17_Chr7g0233531 | 40.000 | 75 | 45 | 0 | 268 | 342 | 2 | 76 | 7.28e-11 | 64.3 |
Msa0487730 | MtrunA17_Chr3g0103171 | 29.730 | 185 | 98 | 4 | 432 | 585 | 5 | 188 | 8.08e-15 | 75.9 |
Msa0487730 | MtrunA17_Chr3g0103171 | 25.735 | 272 | 148 | 9 | 845 | 1073 | 5 | 265 | 1.29e-14 | 75.5 |
Msa0487730 | MtrunA17_Chr3g0103171 | 26.172 | 256 | 129 | 7 | 36 | 232 | 5 | 259 | 2.24e-14 | 74.7 |
Msa0487730 | MtrunA17_Chr3g0103171 | 42.169 | 83 | 44 | 1 | 614 | 692 | 6 | 88 | 3.99e-13 | 70.9 |
Msa0487730 | MtrunA17_Chr3g0103171 | 25.806 | 155 | 85 | 2 | 267 | 414 | 5 | 136 | 2.01e-12 | 68.9 |
Msa0487730 | MtrunA17_Chr1g0163071 | 24.342 | 304 | 139 | 10 | 846 | 1075 | 2 | 288 | 1.01e-14 | 76.6 |
Msa0487730 | MtrunA17_Chr1g0163071 | 24.579 | 297 | 126 | 9 | 37 | 243 | 2 | 290 | 1.73e-13 | 72.8 |
Msa0487730 | MtrunA17_Chr1g0163071 | 24.055 | 291 | 167 | 9 | 268 | 508 | 2 | 288 | 4.43e-12 | 68.6 |
Msa0487730 | MtrunA17_Chr1g0163071 | 38.824 | 85 | 47 | 1 | 433 | 512 | 2 | 86 | 6.32e-12 | 68.2 |
Msa0487730 | MtrunA17_Chr1g0154161 | 25.899 | 278 | 184 | 9 | 251 | 506 | 29 | 306 | 8.14e-14 | 73.9 |
Msa0487730 | MtrunA17_Chr1g0154161 | 23.264 | 288 | 168 | 9 | 829 | 1073 | 29 | 306 | 1.36e-11 | 67.4 |
Msa0487730 | MtrunA17_Chr4g0067431 | 24.585 | 301 | 183 | 9 | 251 | 508 | 14 | 313 | 1.72e-13 | 73.2 |
Msa0487730 | MtrunA17_Chr6g0467351 | 35.659 | 129 | 69 | 4 | 251 | 368 | 14 | 139 | 4.20e-13 | 70.1 |
Msa0487730 | MtrunA17_Chr6g0467351 | 32.692 | 104 | 64 | 2 | 416 | 513 | 14 | 117 | 2.44e-12 | 67.8 |
Msa0487730 | MtrunA17_Chr7g0233541 | 33.858 | 127 | 71 | 5 | 37 | 151 | 2 | 127 | 4.79e-13 | 71.2 |
Msa0487730 | MtrunA17_Chr7g0233541 | 28.042 | 189 | 93 | 7 | 433 | 579 | 2 | 189 | 3.48e-12 | 68.6 |
Msa0487730 | MtrunA17_Chr7g0233541 | 33.036 | 112 | 64 | 4 | 614 | 715 | 2 | 112 | 7.19e-12 | 67.8 |
Msa0487730 | MtrunA17_Chr7g0233541 | 33.981 | 103 | 61 | 2 | 268 | 363 | 2 | 104 | 2.68e-11 | 65.9 |
Msa0487730 | MtrunA17_Chr1g0163251 | 25.391 | 256 | 153 | 10 | 261 | 488 | 14 | 259 | 6.90e-12 | 68.9 |
Msa0487730 | MtrunA17_Chr1g0208771 | 24.232 | 293 | 147 | 7 | 845 | 1075 | 12 | 291 | 1.60e-11 | 68.2 |
Msa0487730 | MtrunA17_Chr1g0163131 | 31.496 | 127 | 76 | 4 | 239 | 360 | 8 | 128 | 2.18e-11 | 66.2 |
Msa0487730 | MtrunA17_Chr1g0154111 | 28.261 | 184 | 106 | 7 | 158 | 336 | 275 | 437 | 3.63e-11 | 67.4 |
Msa0487730 | MtrunA17_Chr1g0163101 | 28.571 | 140 | 91 | 4 | 251 | 384 | 16 | 152 | 3.71e-11 | 63.2 |
Msa0487730 | MtrunA17_Chr1g0163231 | 22.932 | 266 | 170 | 6 | 252 | 493 | 9 | 263 | 6.82e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0487730 | AT3G18990.1 | 38.983 | 118 | 71 | 1 | 417 | 534 | 6 | 122 | 1.56e-21 | 97.8 |
Msa0487730 | AT3G18990.1 | 41.489 | 94 | 55 | 0 | 252 | 345 | 6 | 99 | 1.77e-19 | 91.7 |
Msa0487730 | AT3G18990.1 | 38.384 | 99 | 57 | 1 | 21 | 115 | 6 | 104 | 3.92e-16 | 81.6 |
Msa0487730 | AT3G18990.1 | 37.374 | 99 | 58 | 1 | 598 | 692 | 6 | 104 | 1.86e-15 | 79.7 |
Msa0487730 | AT3G18990.1 | 35.227 | 88 | 57 | 0 | 830 | 917 | 6 | 93 | 1.65e-13 | 73.6 |
Msa0487730 | AT3G18990.1 | 34.783 | 161 | 84 | 5 | 927 | 1079 | 194 | 341 | 1.18e-12 | 71.2 |
Msa0487730 | AT3G18990.2 | 38.983 | 118 | 71 | 1 | 417 | 534 | 6 | 122 | 4.10e-21 | 97.1 |
Msa0487730 | AT3G18990.2 | 41.489 | 94 | 55 | 0 | 252 | 345 | 6 | 99 | 3.05e-19 | 91.7 |
Msa0487730 | AT3G18990.2 | 38.384 | 99 | 57 | 1 | 21 | 115 | 6 | 104 | 5.50e-16 | 81.6 |
Msa0487730 | AT3G18990.2 | 37.374 | 99 | 58 | 1 | 598 | 692 | 6 | 104 | 2.45e-15 | 79.7 |
Msa0487730 | AT3G18990.2 | 35.227 | 88 | 57 | 0 | 830 | 917 | 6 | 93 | 2.62e-13 | 73.6 |
Msa0487730 | AT3G18990.2 | 34.568 | 162 | 85 | 5 | 927 | 1080 | 194 | 342 | 2.04e-12 | 70.9 |
Msa0487730 | AT3G18960.2 | 37.500 | 120 | 70 | 1 | 233 | 347 | 11 | 130 | 9.08e-20 | 89.0 |
Msa0487730 | AT3G18960.2 | 37.719 | 114 | 68 | 1 | 396 | 509 | 12 | 122 | 1.22e-18 | 85.9 |
Msa0487730 | AT3G18960.2 | 34.167 | 120 | 72 | 2 | 579 | 694 | 14 | 130 | 4.14e-16 | 78.6 |
Msa0487730 | AT3G18960.2 | 33.333 | 117 | 71 | 2 | 3 | 115 | 15 | 128 | 1.95e-14 | 73.6 |
Msa0487730 | AT3G18960.2 | 36.275 | 102 | 54 | 1 | 828 | 918 | 28 | 129 | 3.02e-13 | 70.1 |
Msa0487730 | AT3G18960.1 | 37.500 | 120 | 70 | 1 | 233 | 347 | 11 | 130 | 1.21e-19 | 89.0 |
Msa0487730 | AT3G18960.1 | 37.719 | 114 | 68 | 1 | 396 | 509 | 12 | 122 | 1.83e-18 | 85.5 |
Msa0487730 | AT3G18960.1 | 34.167 | 120 | 72 | 2 | 579 | 694 | 14 | 130 | 1.19e-15 | 77.4 |
Msa0487730 | AT3G18960.1 | 33.333 | 117 | 71 | 2 | 3 | 115 | 15 | 128 | 5.28e-14 | 72.8 |
Msa0487730 | AT3G18960.1 | 36.275 | 102 | 54 | 1 | 828 | 918 | 28 | 129 | 4.69e-13 | 70.1 |
Msa0487730 | AT4G01580.1 | 41.748 | 103 | 55 | 1 | 250 | 347 | 28 | 130 | 2.56e-19 | 87.4 |
Msa0487730 | AT4G01580.1 | 38.393 | 112 | 66 | 1 | 396 | 507 | 12 | 120 | 3.32e-18 | 84.3 |
Msa0487730 | AT4G01580.1 | 35.780 | 109 | 66 | 1 | 590 | 694 | 22 | 130 | 3.12e-16 | 78.6 |
Msa0487730 | AT4G01580.1 | 34.579 | 107 | 66 | 1 | 13 | 115 | 22 | 128 | 2.73e-14 | 73.2 |
Msa0487730 | AT4G01580.1 | 38.235 | 102 | 52 | 1 | 828 | 918 | 28 | 129 | 1.17e-13 | 71.2 |
Msa0487730 | AT1G49475.1 | 37.692 | 130 | 72 | 3 | 396 | 520 | 16 | 141 | 1.12e-17 | 82.8 |
Msa0487730 | AT1G49475.1 | 34.286 | 140 | 85 | 3 | 222 | 355 | 3 | 141 | 5.39e-16 | 77.8 |
Msa0487730 | AT1G49475.1 | 36.800 | 125 | 72 | 3 | 582 | 702 | 20 | 141 | 4.78e-15 | 75.1 |
Msa0487730 | AT1G49475.1 | 36.000 | 125 | 73 | 3 | 5 | 125 | 20 | 141 | 3.18e-14 | 72.8 |
Msa0487730 | AT1G26680.6 | 21.846 | 531 | 333 | 22 | 20 | 494 | 14 | 518 | 2.10e-14 | 78.6 |
Msa0487730 | AT1G26680.6 | 22.787 | 531 | 343 | 24 | 597 | 1072 | 14 | 532 | 1.26e-13 | 75.9 |
Msa0487730 | AT1G26680.5 | 21.846 | 531 | 333 | 21 | 20 | 494 | 14 | 518 | 2.53e-14 | 78.2 |
Msa0487730 | AT1G26680.5 | 22.787 | 531 | 343 | 24 | 597 | 1072 | 14 | 532 | 1.37e-13 | 75.9 |
Msa0487730 | AT3G18960.3 | 39.535 | 86 | 47 | 1 | 267 | 347 | 8 | 93 | 2.81e-14 | 72.4 |
Msa0487730 | AT3G18960.3 | 39.744 | 78 | 47 | 0 | 432 | 509 | 8 | 85 | 5.77e-13 | 68.6 |
Msa0487730 | AT3G18960.3 | 35.294 | 85 | 51 | 1 | 614 | 694 | 9 | 93 | 1.73e-11 | 64.3 |
Msa0487730 | AT1G26680.1 | 22.031 | 522 | 347 | 21 | 20 | 497 | 14 | 519 | 7.98e-14 | 76.6 |
Msa0487730 | AT1G26680.4 | 22.031 | 522 | 347 | 21 | 20 | 497 | 14 | 519 | 8.87e-14 | 76.6 |
Msa0487730 | AT1G49480.3 | 32.857 | 140 | 78 | 3 | 945 | 1079 | 98 | 226 | 1.66e-12 | 68.6 |
Msa0487730 | AT1G49480.1 | 32.857 | 140 | 78 | 3 | 945 | 1079 | 98 | 226 | 1.66e-12 | 68.6 |
Msa0487730 | AT1G49480.2 | 32.857 | 140 | 78 | 3 | 945 | 1079 | 98 | 226 | 1.66e-12 | 68.6 |
Msa0487730 | AT1G26680.3 | 21.869 | 535 | 339 | 22 | 20 | 494 | 14 | 529 | 4.80e-11 | 67.8 |
Find 234 sgRNAs with CRISPR-Local
Find 703 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATGAGTTTATAACAAAATT+TGG | 0.100922 | 3_4:+6859070 | Msa0487730:CDS |
ATAATTTCCCATTAGAATTT+TGG | 0.142530 | 3_4:-6864174 | None:intergenic |
ACTGCTTTCCTTGAGAATTT+TGG | 0.150373 | 3_4:-6859594 | None:intergenic |
TTAGAATTTACGAGCTTTAT+AGG | 0.186540 | 3_4:-6869898 | None:intergenic |
AGTAATATCCTTTGATCTTT+TGG | 0.190901 | 3_4:-6868341 | None:intergenic |
GGATGGTCTTATTTGGAAAA+TGG | 0.199369 | 3_4:+6869373 | Msa0487730:CDS |
ATGGAATCCGTAGATTTCTT+AGG | 0.206073 | 3_4:+6868644 | Msa0487730:CDS |
GAATACTATTCTATTTATTA+TGG | 0.217855 | 3_4:+6859208 | Msa0487730:CDS |
CTGTTCTGGATGGTCTTATT+TGG | 0.222871 | 3_4:+6869366 | Msa0487730:CDS |
TGATGGTCTTACTTGGAAAT+TGG | 0.227158 | 3_4:+6860316 | Msa0487730:CDS |
CAATTCCTAAACCTGCTTAT+AGG | 0.229958 | 3_4:-6870271 | None:intergenic |
GAATACTATTCCATTTATTA+TGG | 0.231914 | 3_4:+6868178 | Msa0487730:CDS |
GGCAGCATCCTTTGATCTTT+TGG | 0.235120 | 3_4:-6859371 | None:intergenic |
GAACGAAAAGAAGTGTTTAT+TGG | 0.235783 | 3_4:-6868376 | None:intergenic |
AAGTGAGAGTCATGAGAAAA+AGG | 0.253305 | 3_4:+6864070 | Msa0487730:CDS |
AACATTATTATAAAGTCTTC+TGG | 0.259297 | 3_4:-6869311 | None:intergenic |
GGAAAGCAGTGGGAAGTTTC+TGG | 0.267335 | 3_4:+6868580 | Msa0487730:CDS |
TATGGCCTTCTTAAAATGTT+TGG | 0.280661 | 3_4:-6860111 | None:intergenic |
TATGGCCTTCTTAAAATGTT+TGG | 0.280661 | 3_4:-6869167 | None:intergenic |
TACTATTTCTTTGTCATGAA+TGG | 0.283812 | 3_4:-6869200 | None:intergenic |
TAAGTAACAACCATAATAAA+TGG | 0.285633 | 3_4:-6868188 | None:intergenic |
CTCCATTAGTCCTCCAAGTT+TGG | 0.288512 | 3_4:-6868288 | None:intergenic |
TACTATTTGTTTGTCATGAA+TGG | 0.295878 | 3_4:-6860144 | None:intergenic |
TATGGCTTTCATAAAATGTT+TGG | 0.299040 | 3_4:-6857946 | None:intergenic |
GAAGACTTTATAATAATGTT+TGG | 0.300221 | 3_4:+6869314 | Msa0487730:CDS |
CACCACAGTACTATGCTTAT+AGG | 0.300478 | 3_4:-6860639 | None:intergenic |
GATGAGTTTATAACAAGATA+TGG | 0.301447 | 3_4:+6868040 | Msa0487730:CDS |
GGCTTTATGCGTTGATGATC+TGG | 0.303110 | 3_4:-6869962 | None:intergenic |
CGATGGTCGTGAGTGGGATA+TGG | 0.308591 | 3_4:+6859129 | Msa0487730:CDS |
TTTGCAGAATACTATTCTAT+AGG | 0.313465 | 3_4:+6863882 | Msa0487730:CDS |
CCATTAGTTATTCGCATTGC+TGG | 0.322446 | 3_4:-6868625 | None:intergenic |
AACATTGTTATAAAATCTTC+AGG | 0.326094 | 3_4:-6860254 | None:intergenic |
CTGTGTTTGATTGCTGTAAT+GGG | 0.332496 | 3_4:+6870204 | Msa0487730:three_prime_UTR |
CACTGCATAGTGGCTGGCTT+TGG | 0.335321 | 3_4:-6868398 | None:intergenic |
CATGGTTCATTATTTATAGT+AGG | 0.339817 | 3_4:-6870154 | None:intergenic |
TTGCAGAATACTATTCTATA+GGG | 0.341018 | 3_4:+6863883 | Msa0487730:CDS |
AACGAAAAGAAGTGTTTATT+GGG | 0.345284 | 3_4:-6868375 | None:intergenic |
AAACAAACAATGAGTGTTCT+AGG | 0.346958 | 3_4:+6869585 | Msa0487730:CDS |
AGAATCCTATAAGCAGGTTT+AGG | 0.347207 | 3_4:+6870266 | Msa0487730:three_prime_UTR |
ATGAGTTTATAACAAAATTT+GGG | 0.347730 | 3_4:+6859071 | Msa0487730:CDS |
TTCAAAACTCCGAGGACTAA+TGG | 0.352679 | 3_4:+6859316 | Msa0487730:CDS |
TGCACATCCGCCAAAGGCTT+TGG | 0.356051 | 3_4:-6859428 | None:intergenic |
TCCATTGTGTAGTATGTTCC+TGG | 0.362474 | 3_4:+6859532 | Msa0487730:intron |
TTTCTTATCCATTCCAAACT+TGG | 0.371290 | 3_4:+6868275 | Msa0487730:CDS |
TGTTGTTACAGTTACTGTTC+TGG | 0.374715 | 3_4:+6869352 | Msa0487730:CDS |
AAGACTTTATAATAATGTTT+GGG | 0.374815 | 3_4:+6869315 | Msa0487730:CDS |
ATGAATGGGCGAGGGAAGTA+TGG | 0.376143 | 3_4:-6860129 | None:intergenic |
ATGAATGGGCGAGGGAAGTA+TGG | 0.376143 | 3_4:-6869185 | None:intergenic |
ATAAAGCTCGTAAATTCTAA+TGG | 0.378322 | 3_4:+6869901 | Msa0487730:CDS |
CTCAAAACTCCAAGTACTAA+TGG | 0.380211 | 3_4:+6860503 | Msa0487730:CDS |
CTGTACCTGATGGTCTTACT+TGG | 0.380651 | 3_4:+6860309 | Msa0487730:CDS |
TGAAGCATGAACGGAACATT+TGG | 0.380851 | 3_4:-6868547 | None:intergenic |
TATTGTGGAGCAAATATATA+AGG | 0.383893 | 3_4:-6869859 | None:intergenic |
TTCCAAACTTGGAGGACTAA+TGG | 0.389564 | 3_4:+6868286 | Msa0487730:CDS |
TCTGTGTTTGATTGCTGTAA+TGG | 0.391753 | 3_4:+6870203 | Msa0487730:three_prime_UTR |
TTCCTGTGTTTCAAATATGA+AGG | 0.394296 | 3_4:+6863915 | Msa0487730:CDS |
CTCTGTCCTGCCACCGGCGG+CGG | 0.394380 | 3_4:+6862718 | Msa0487730:CDS |
GTGCTCGGACACTTTATGTT+TGG | 0.397057 | 3_4:-6859343 | None:intergenic |
GTGGGAAGTTTCTGGTGTAT+TGG | 0.397299 | 3_4:+6868588 | Msa0487730:CDS |
ATGATCTGGAGGAGGAAGTA+TGG | 0.403287 | 3_4:-6857964 | None:intergenic |
GTGGGAAGTTTCTTGTATAT+CGG | 0.404351 | 3_4:+6859615 | Msa0487730:CDS |
AAGTGAGAGTCAAGGAAATA+AGG | 0.405204 | 3_4:+6869634 | Msa0487730:CDS |
GAGCTCGGACACTTTATGTT+TGG | 0.406751 | 3_4:-6868313 | None:intergenic |
CTCTCTCCGCCGCCGGTGGC+AGG | 0.410020 | 3_4:-6862724 | None:intergenic |
ACTATTTGTTTGTCATGAAT+GGG | 0.410462 | 3_4:-6860143 | None:intergenic |
ACTATTTCTTTGTCATGAAT+GGG | 0.411715 | 3_4:-6869199 | None:intergenic |
CCAGCAATGCGAATAACTAA+TGG | 0.412619 | 3_4:+6868625 | Msa0487730:CDS |
TGCAGGCGGAGAAGGAAGTT+AGG | 0.415021 | 3_4:+6869140 | Msa0487730:intron |
TAAGCAGGTTTAGGAATTGT+TGG | 0.415062 | 3_4:+6870275 | Msa0487730:three_prime_UTR |
ACTCTCACTTGTTTCAACCT+TGG | 0.424742 | 3_4:-6869621 | None:intergenic |
TTCAAAACTCTAAGTACAAA+TGG | 0.425055 | 3_4:+6863996 | Msa0487730:CDS |
TATCTTGTTATAAACTCATC+TGG | 0.429283 | 3_4:-6868037 | None:intergenic |
AACAATGAGTGTTCTAGGCC+TGG | 0.431083 | 3_4:+6869590 | Msa0487730:CDS |
AAATGTTTGGAATCTTTCTC+CGG | 0.434011 | 3_4:-6857933 | None:intergenic |
ATGAATGGGTGAGGGAAGTA+TGG | 0.436041 | 3_4:-6862768 | None:intergenic |
TTTGTTTCTCCACTACTACT+TGG | 0.437947 | 3_4:-6869569 | None:intergenic |
TATTTAGATTTCAAGTATGA+AGG | 0.439885 | 3_4:+6859235 | Msa0487730:intron |
TCCCTTCATATTCGAAAGAC+AGG | 0.440227 | 3_4:-6860424 | None:intergenic |
ATACTTCCCTCACCCATTCA+TGG | 0.443666 | 3_4:+6862770 | Msa0487730:CDS |
TTTGAATCTTTCTCCGGCTC+CGG | 0.445887 | 3_4:-6867524 | None:intergenic |
TGGAATCCGTAGATTTCTTA+GGG | 0.446234 | 3_4:+6868645 | Msa0487730:CDS |
TTTGTTTCTCCATTAGTACT+TGG | 0.446615 | 3_4:-6860512 | None:intergenic |
TCTTTCTCCGGCTCCGGCGA+CGG | 0.452971 | 3_4:-6857921 | None:intergenic |
TCTTTCTCCGGCTCCGGCGA+CGG | 0.452971 | 3_4:-6867518 | None:intergenic |
GTAACTTGTAACACCACAAC+AGG | 0.456427 | 3_4:-6868721 | None:intergenic |
CTGTTCCCGATGGTTGTGAT+TGG | 0.457952 | 3_4:+6868092 | Msa0487730:CDS |
CTGTTCCTGATGGTCGTGAT+TGG | 0.459514 | 3_4:+6863802 | Msa0487730:CDS |
TTAGCACAACTGGACTCTCC+TGG | 0.465043 | 3_4:-6870077 | None:intergenic |
ACTCTCACTTGTTTCAACCT+TGG | 0.466400 | 3_4:-6864057 | None:intergenic |
ATGGTTCATTATTTATAGTA+GGG | 0.470374 | 3_4:-6870153 | None:intergenic |
AATTTCCAAGTAAGACCATC+AGG | 0.471155 | 3_4:-6860314 | None:intergenic |
ATGTGTTCCGTCGCCGGAGC+CGG | 0.471949 | 3_4:+6867511 | Msa0487730:CDS |
TCTGTTCCTTGATCCTCACT+TGG | 0.472253 | 3_4:-6860596 | None:intergenic |
AGGCAGAACAATCTGTCATA+TGG | 0.474080 | 3_4:+6870030 | Msa0487730:CDS |
CAATACTATTCTTTAAGATA+CGG | 0.474788 | 3_4:+6860395 | Msa0487730:CDS |
GTAACTTGTAACACAGCAAC+AGG | 0.476992 | 3_4:-6859748 | None:intergenic |
CTTATCCATTCCAAACTTGG+AGG | 0.477254 | 3_4:+6868278 | Msa0487730:CDS |
TGTTCCCGATGGTTGTGATT+GGG | 0.478145 | 3_4:+6868093 | Msa0487730:CDS |
AAGATTAGAATCCTATAAGC+AGG | 0.482981 | 3_4:+6870260 | Msa0487730:three_prime_UTR |
ATTTCCCAATCACGACCATC+AGG | 0.484720 | 3_4:-6863807 | None:intergenic |
AGTGTCATAGTCGTAGAAAA+AGG | 0.486595 | 3_4:+6864033 | Msa0487730:CDS |
TGATGGTCGTGATTGGGAAA+TGG | 0.490310 | 3_4:+6863809 | Msa0487730:CDS |
ACATTTAGCTTCAGATATTG+TGG | 0.490807 | 3_4:-6869874 | None:intergenic |
TTGGAATCTTTCTCCGGCTC+CGG | 0.490863 | 3_4:-6857927 | None:intergenic |
GGTTTAGGAATTGTTGGACT+AGG | 0.494877 | 3_4:+6870281 | Msa0487730:three_prime_UTR |
TGTTCCTGATGGTCGTGATT+GGG | 0.496959 | 3_4:+6863803 | Msa0487730:CDS |
TATTGAATTGCAGGCGGAGA+AGG | 0.498005 | 3_4:+6860076 | Msa0487730:intron |
TATTGAATTGCAGGCGGAGA+AGG | 0.498005 | 3_4:+6869132 | Msa0487730:intron |
AGCATAATTGATTTCAACCC+TGG | 0.498720 | 3_4:-6860564 | None:intergenic |
AATTCTAATGGGAAATTATG+TGG | 0.499901 | 3_4:+6864178 | Msa0487730:CDS |
ATATGTTCCGTCGCCGGAGC+CGG | 0.500331 | 3_4:+6857914 | Msa0487730:CDS |
GTGGCAGGACAGAGCTTCTC+CGG | 0.500731 | 3_4:-6862709 | None:intergenic |
GAATACTATTCTTTAAGATA+CGG | 0.502713 | 3_4:+6869452 | Msa0487730:CDS |
CAAGGCCTAGGAAAAGGTCC+AGG | 0.503244 | 3_4:+6860546 | Msa0487730:CDS |
AGTGTCCAAGGCCTAGGAAA+AGG | 0.504716 | 3_4:+6860540 | Msa0487730:CDS |
ACAATGAGTGTTCTAGGCCT+GGG | 0.507287 | 3_4:+6869591 | Msa0487730:CDS |
GAGAAGATGTGTTCCGTCGC+CGG | 0.508033 | 3_4:+6867505 | Msa0487730:CDS |
TTCTTTGTCATGAATGGGCG+AGG | 0.508053 | 3_4:-6869194 | None:intergenic |
AGTGTTCTAGGCCTGGGAAA+AGG | 0.508131 | 3_4:+6869597 | Msa0487730:CDS |
CCCCTTCATATTTGAAACAC+AGG | 0.508323 | 3_4:-6863917 | None:intergenic |
ATGAGTTTATAACAAGATAT+GGG | 0.513374 | 3_4:+6868041 | Msa0487730:CDS |
TTTCGTTCCAAAGCCTTTGG+CGG | 0.513757 | 3_4:+6859421 | Msa0487730:CDS |
TTCATTATTTATAGTAGGGA+GGG | 0.513787 | 3_4:-6870149 | None:intergenic |
TATTTGCATTGCTGATGACT+CGG | 0.515832 | 3_4:-6869983 | None:intergenic |
GCGACGGAACACATCTTCTC+CGG | 0.518324 | 3_4:-6867502 | None:intergenic |
TTTGGTTCTCCATTAGTCCT+CGG | 0.518425 | 3_4:-6859325 | None:intergenic |
TTCCTGTCTTTCGAATATGA+AGG | 0.519724 | 3_4:+6860422 | Msa0487730:CDS |
TTCATGCTTCAAAATTCTCA+AGG | 0.523168 | 3_4:+6868559 | Msa0487730:CDS |
GAATACTATTCTATAGGGTA+TGG | 0.523564 | 3_4:+6863888 | Msa0487730:CDS |
ATATCCCACTCACGACCATC+GGG | 0.524249 | 3_4:-6859127 | None:intergenic |
ATTTAGATTTCAAGTATGAA+GGG | 0.527803 | 3_4:+6859236 | Msa0487730:intron |
GCAGGCGGAGAAGGAAGTTA+GGG | 0.528822 | 3_4:+6869141 | Msa0487730:intron |
TCCTGTGTTTCAAATATGAA+GGG | 0.529278 | 3_4:+6863916 | Msa0487730:CDS |
TTGTGTGTTTGAGCTGATCC+AGG | 0.531256 | 3_4:+6870059 | Msa0487730:CDS |
AAATCTCTCTCCGCCGCCGG+TGG | 0.531426 | 3_4:-6862728 | None:intergenic |
TTGAAATCTCTCTCCGCCGC+CGG | 0.532754 | 3_4:-6862731 | None:intergenic |
CATATCCCACTCACGACCAT+CGG | 0.533925 | 3_4:-6859128 | None:intergenic |
AACAAACAATGCAGGCTCGC+CGG | 0.535855 | 3_4:+6862690 | Msa0487730:intron |
AGATCAAAGGATGCTGCCAA+TGG | 0.538359 | 3_4:+6859376 | Msa0487730:CDS |
TTATAGGTAGAAATAAAAGA+AGG | 0.539979 | 3_4:-6860623 | None:intergenic |
TCCTGTCTTTCGAATATGAA+GGG | 0.540870 | 3_4:+6860423 | Msa0487730:CDS |
TATAGGTAGAAATAAAAGAA+GGG | 0.541741 | 3_4:-6860622 | None:intergenic |
ACACGGAGTGTCCAAGGCCT+AGG | 0.542974 | 3_4:+6860534 | Msa0487730:CDS |
GAGAAGATATGTTCCGTCGC+CGG | 0.544889 | 3_4:+6857908 | Msa0487730:CDS |
GTGGATTCTGTAGATTTGCA+AGG | 0.544893 | 3_4:+6859671 | Msa0487730:CDS |
TTGTTTGTCATGAATGGGCG+AGG | 0.546897 | 3_4:-6860138 | None:intergenic |
AATCCTCACTGCATAGTGGC+TGG | 0.548217 | 3_4:-6868404 | None:intergenic |
TTAGTCCTCCAAGTTTGGAA+TGG | 0.549309 | 3_4:-6868283 | None:intergenic |
AATATCCCAATCACAACCAT+CGG | 0.550561 | 3_4:-6868098 | None:intergenic |
GTTCATTATTTATAGTAGGG+AGG | 0.557515 | 3_4:-6870150 | None:intergenic |
AGATCAAAGGATATTACTTG+TGG | 0.558854 | 3_4:+6868346 | Msa0487730:CDS |
CTCTGCTTCCAAAAGATCAA+AGG | 0.559021 | 3_4:+6868333 | Msa0487730:CDS |
GTTACAGTTACTGTTCTGGA+TGG | 0.559754 | 3_4:+6869356 | Msa0487730:CDS |
TACTAATTGAGTGCCATGAA+TGG | 0.560737 | 3_4:-6862783 | None:intergenic |
AAGGCTTTGGAACGAAAACA+AGG | 0.561637 | 3_4:-6859415 | None:intergenic |
ACAAGTTACTGCGTCTCGCA+CGG | 0.562350 | 3_4:+6859762 | Msa0487730:CDS |
AGAATATTACCACATGTAGC+AGG | 0.563770 | 3_4:-6870183 | None:intergenic |
TGTTCCTAGTGAATTTGCTA+AGG | 0.564882 | 3_4:+6868513 | Msa0487730:CDS |
AAATTGGAATTGAAGAAACG+TGG | 0.566955 | 3_4:+6860332 | Msa0487730:CDS |
GCGACGGAACATATCTTCTC+CGG | 0.567057 | 3_4:-6857905 | None:intergenic |
CACTGCTTCCAAAAGATCAA+AGG | 0.568858 | 3_4:+6859363 | Msa0487730:CDS |
TAAATTCTAATGGAGATGAG+TGG | 0.570954 | 3_4:+6869911 | Msa0487730:CDS |
AAACAAACACGGAGTGTCCA+AGG | 0.572497 | 3_4:+6860528 | Msa0487730:CDS |
GAGAAGCTCTGTCCTGCCAC+CGG | 0.575070 | 3_4:+6862712 | Msa0487730:CDS |
TTTACTTTAAGCTGATCAAG+AGG | 0.576543 | 3_4:+6868695 | Msa0487730:CDS |
TGTTCCTGGTGAATTTGCTA+AGG | 0.578362 | 3_4:+6859546 | Msa0487730:CDS |
ACTAATTGAGTGCCATGAAT+GGG | 0.579633 | 3_4:-6862782 | None:intergenic |
AGGGAAAACAAGTTATCAGA+TGG | 0.579643 | 3_4:+6868664 | Msa0487730:CDS |
AAAATTCTCAAGGAAAGCAG+TGG | 0.582056 | 3_4:+6868569 | Msa0487730:CDS |
ATATCCCAATCACAACCATC+GGG | 0.582201 | 3_4:-6868097 | None:intergenic |
GTAAAATCCTCACTGCATAG+TGG | 0.585890 | 3_4:-6868408 | None:intergenic |
ATCAGCAATGCAAATAACGC+AGG | 0.590408 | 3_4:+6869990 | Msa0487730:CDS |
AAATTCTAATGGAGATGAGT+GGG | 0.591055 | 3_4:+6869912 | Msa0487730:CDS |
CCTGTGTTTCAAATATGAAG+GGG | 0.591078 | 3_4:+6863917 | Msa0487730:CDS |
TCTTACTGCACATCCGCCAA+AGG | 0.591238 | 3_4:-6859434 | None:intergenic |
GTCATGCTCCAAAATTCTCA+AGG | 0.593868 | 3_4:+6859586 | Msa0487730:CDS |
AAGGGAAAACAATCTATCAA+AGG | 0.593937 | 3_4:+6859690 | Msa0487730:CDS |
AATTGGAATTGAAGAAACGT+GGG | 0.594882 | 3_4:+6860333 | Msa0487730:CDS |
TACTTAGATTTCAAGTACGA+AGG | 0.598912 | 3_4:+6868205 | Msa0487730:intron |
AAAATTCTCAAGGAAAGCAG+TGG | 0.599450 | 3_4:+6859596 | Msa0487730:CDS |
TGGATTCTGTAGATTTGCAA+GGG | 0.600149 | 3_4:+6859672 | Msa0487730:CDS |
TGCTGATGATTCACCAAGTG+AGG | 0.601710 | 3_4:+6860583 | Msa0487730:CDS |
ACAACTTTGAGCTGATCAAG+AGG | 0.603297 | 3_4:+6859722 | Msa0487730:CDS |
ACATGCTTCTGAAAGAGCAA+AGG | 0.603971 | 3_4:+6864109 | Msa0487730:CDS |
GATTCACCAAGTGAGGATCA+AGG | 0.604229 | 3_4:+6860590 | Msa0487730:CDS |
GCAGGCGGAGAAGGAAGGTA+GGG | 0.604865 | 3_4:+6860085 | Msa0487730:intron |
GCTACCATTACTATTCCCGA+TGG | 0.609181 | 3_4:+6859112 | Msa0487730:CDS |
TTGAGTGCCATGAATGGGTG+AGG | 0.609441 | 3_4:-6862777 | None:intergenic |
TGCAGGCGGAGAAGGAAGGT+AGG | 0.610068 | 3_4:+6860084 | Msa0487730:intron |
AATCCACTCGTAATTCGCAT+TGG | 0.611373 | 3_4:-6859655 | None:intergenic |
AAGAAACAATGAAGACTCAC+CGG | 0.615286 | 3_4:+6857886 | None:intergenic |
AAGAAACAATGAAGACTCGC+CGG | 0.617368 | 3_4:+6867483 | Msa0487730:intron |
ACATGTAGCAGGCAACATCA+TGG | 0.619484 | 3_4:-6870172 | None:intergenic |
ACAAGTTACAACGTTTCGCA+CGG | 0.620954 | 3_4:+6868735 | Msa0487730:CDS |
TCTGGTGTATTGGATAGACC+AGG | 0.621480 | 3_4:+6868598 | Msa0487730:CDS |
TTCATATTTGAAACACAGGA+AGG | 0.623348 | 3_4:-6863913 | None:intergenic |
AAATTCTCAAGGAAAGCAGT+GGG | 0.627522 | 3_4:+6868570 | Msa0487730:CDS |
TATTCCCGATGGTCGTGAGT+GGG | 0.627663 | 3_4:+6859123 | Msa0487730:CDS |
TGCTCCTTAGCAAATTCACC+AGG | 0.628603 | 3_4:-6859550 | None:intergenic |
CTATTCCCGATGGTCGTGAG+TGG | 0.632144 | 3_4:+6859122 | Msa0487730:CDS |
ACGACCATCGGGAATAGTAA+TGG | 0.633705 | 3_4:-6859116 | None:intergenic |
GATATTGAACTAAAGAAATG+TGG | 0.634743 | 3_4:+6868115 | Msa0487730:CDS |
AAATTCTCAAGGAAAGCAGT+GGG | 0.637805 | 3_4:+6859597 | Msa0487730:CDS |
GCTACAATTACTGTTCCTGA+TGG | 0.638622 | 3_4:+6863792 | Msa0487730:CDS |
GCTACAATTACTGTTCCCGA+TGG | 0.639314 | 3_4:+6868082 | Msa0487730:CDS |
CTTATTCATTCAAAACTCCG+AGG | 0.640841 | 3_4:+6859308 | Msa0487730:CDS |
GTTGAAACAAGTGAGAGTCA+AGG | 0.642586 | 3_4:+6869626 | Msa0487730:CDS |
GAATTGCAGGCGGAGAAGGA+AGG | 0.644062 | 3_4:+6860080 | Msa0487730:intron |
TAGGCCTGGGAAAAGGTCCA+AGG | 0.645601 | 3_4:+6869604 | Msa0487730:CDS |
ACACCAATGCGAATTACGAG+TGG | 0.647816 | 3_4:+6859652 | Msa0487730:CDS |
AAAAGTCACGATATTTCGTG+TGG | 0.648071 | 3_4:+6870098 | Msa0487730:CDS |
TGCTCCTTAGCAAATTCACT+AGG | 0.648825 | 3_4:-6868517 | None:intergenic |
AAGCTCTGTCCTGCCACCGG+CGG | 0.650688 | 3_4:+6862715 | Msa0487730:CDS |
TGTTTGTCATGAATGGGCGA+GGG | 0.652999 | 3_4:-6860137 | None:intergenic |
TCTTTGTCATGAATGGGCGA+GGG | 0.652999 | 3_4:-6869193 | None:intergenic |
AAAATGGACTTGAAGAAATG+TGG | 0.654458 | 3_4:+6869389 | Msa0487730:CDS |
GATCAAGAGGAAGCCTGTTG+TGG | 0.656312 | 3_4:+6868708 | Msa0487730:CDS |
AGGCTTTGGAACGAAAACAA+GGG | 0.659531 | 3_4:-6859414 | None:intergenic |
TCAGCAATGCAAATAACGCA+GGG | 0.661161 | 3_4:+6869991 | Msa0487730:CDS |
TCTCACCGCATGTCTTCCCG+TGG | 0.662233 | 3_4:-6869747 | None:intergenic |
GCTACAGTTACTGTACCTGA+TGG | 0.662981 | 3_4:+6860299 | Msa0487730:CDS |
TAAGGAGCATCTGAAGCCAA+AGG | 0.672174 | 3_4:+6859564 | Msa0487730:CDS |
GGAATTGAAGAAACGTGGGG+AGG | 0.674047 | 3_4:+6860337 | Msa0487730:CDS |
AATCACCACGGGAAGACATG+CGG | 0.676904 | 3_4:+6869742 | Msa0487730:CDS |
GAAATGGAACTGAAGAAATG+CGG | 0.682734 | 3_4:+6863825 | Msa0487730:CDS |
AAGGCCTAGGAAAAGGTCCA+GGG | 0.684915 | 3_4:+6860547 | Msa0487730:CDS |
ATGGAACTGAAGAAATGTGG+CGG | 0.686123 | 3_4:+6859148 | Msa0487730:CDS |
TACCTATAAGCATAGTACTG+TGG | 0.687770 | 3_4:+6860637 | Msa0487730:CDS |
GATATGGAACTGAAGAAATG+TGG | 0.697083 | 3_4:+6859145 | Msa0487730:CDS |
TGAGTGCCATGAATGGGTGA+GGG | 0.700904 | 3_4:-6862776 | None:intergenic |
TACTAATGGAGAAACAAACA+CGG | 0.702116 | 3_4:+6860517 | Msa0487730:CDS |
ATGATGTTGCCTGCTACATG+TGG | 0.719900 | 3_4:+6870174 | Msa0487730:three_prime_UTR |
ATTGGAATTGAAGAAACGTG+GGG | 0.725338 | 3_4:+6860334 | Msa0487730:CDS |
GGACTTGAAGAAATGTGGCG+AGG | 0.740403 | 3_4:+6869394 | Msa0487730:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TACTTCTTAATTATTATATA+TGG | + | chr3_4:6858104-6858123 | Msa0487730:intron | 10.0% |
!!! | AAATATATTTTAGTTCTTAA+GGG | - | chr3_4:6861407-6861426 | None:intergenic | 10.0% |
!!! | AAAATATATTTTAGTTCTTA+AGG | - | chr3_4:6861408-6861427 | None:intergenic | 10.0% |
!!! | AATTTGAGTTTATTTTTTTA+AGG | - | chr3_4:6861752-6861771 | None:intergenic | 10.0% |
!!! | ATAAATTTCAATCTTTTTAT+GGG | + | chr3_4:6866198-6866217 | Msa0487730:intron | 10.0% |
!! | TATTGTAATTCATATTATAT+AGG | + | chr3_4:6868838-6868857 | Msa0487730:intron | 10.0% |
!!! | TATTTTTATTGCTATATTTA+TGG | + | chr3_4:6870330-6870349 | Msa0487730:three_prime_UTR | 10.0% |
!! | ATTAATTATTAGTGTATGTT+TGG | + | chr3_4:6858221-6858240 | Msa0487730:intron | 15.0% |
!!! | AAAATTTGATTTTGAAACTT+TGG | + | chr3_4:6858256-6858275 | Msa0487730:intron | 15.0% |
!! | TAGATTCAACTTTATTATTA+AGG | - | chr3_4:6858443-6858462 | None:intergenic | 15.0% |
!!! | ATTTTTGTTACATTGATAAT+AGG | - | chr3_4:6858637-6858656 | None:intergenic | 15.0% |
!! | ATGAGTTTATAACAAAATTT+GGG | + | chr3_4:6859071-6859090 | Msa0487730:CDS | 15.0% |
!! | GAATACTATTCTATTTATTA+TGG | + | chr3_4:6859208-6859227 | Msa0487730:CDS | 15.0% |
!!! | GAATTTTACTTTATAGTATT+TGG | + | chr3_4:6859455-6859474 | Msa0487730:intron | 15.0% |
!! | TATTTGTTTATAATGTGAAT+TGG | + | chr3_4:6860018-6860037 | Msa0487730:intron | 15.0% |
!!! | AAGATTTTATAACAATGTTT+GGG | + | chr3_4:6860258-6860277 | Msa0487730:CDS | 15.0% |
!!! | TATTTTTTTAAGGATTGTTT+TGG | - | chr3_4:6861742-6861761 | None:intergenic | 15.0% |
!!! | TAATCTTGTCATTTTTATAT+TGG | + | chr3_4:6861771-6861790 | Msa0487730:intron | 15.0% |
!!! | AATCTTGTCATTTTTATATT+GGG | + | chr3_4:6861772-6861791 | Msa0487730:intron | 15.0% |
!!! | TTAAAATTAGTCATCTTTTT+AGG | + | chr3_4:6862326-6862345 | Msa0487730:intron | 15.0% |
!!! | AAAAACTAAAAGAATTTGTT+TGG | + | chr3_4:6862434-6862453 | Msa0487730:intron | 15.0% |
!!! | AAAACTAAAAGAATTTGTTT+GGG | + | chr3_4:6862435-6862454 | Msa0487730:intron | 15.0% |
!! | CTTCATATTAAAAACAATTA+AGG | - | chr3_4:6863244-6863263 | None:intergenic | 15.0% |
!! | TACAAAATATTATATTTGAC+AGG | + | chr3_4:6864790-6864809 | Msa0487730:intron | 15.0% |
!! | AATTTCAAAGATAAATTAAG+TGG | + | chr3_4:6864960-6864979 | Msa0487730:intron | 15.0% |
!! | AAGTATAAAAAAAGGATATT+TGG | + | chr3_4:6865256-6865275 | Msa0487730:intron | 15.0% |
!!! | ATTTTATCACAAATAATTCA+TGG | - | chr3_4:6865616-6865635 | None:intergenic | 15.0% |
!! | TGAATTATTTGTGATAAAAT+TGG | + | chr3_4:6865616-6865635 | Msa0487730:intron | 15.0% |
!! | GAATTATTTGTGATAAAATT+GGG | + | chr3_4:6865617-6865636 | Msa0487730:intron | 15.0% |
!! | AATTATTTGTGATAAAATTG+GGG | + | chr3_4:6865618-6865637 | Msa0487730:intron | 15.0% |
!!! | CATAAATTTCAATCTTTTTA+TGG | + | chr3_4:6866197-6866216 | Msa0487730:intron | 15.0% |
!!! | TGTACAAATAATATTGATTT+AGG | - | chr3_4:6866298-6866317 | None:intergenic | 15.0% |
!! | TACCTAAATCAATATTATTT+AGG | - | chr3_4:6866293-6866312 | None:intergenic | 15.0% |
!!! | ATCAACTTTTTCTTATAAAT+AGG | + | chr3_4:6867099-6867118 | Msa0487730:intron | 15.0% |
!!! | TGAATTCAACAATATATTTT+AGG | + | chr3_4:6867846-6867865 | Msa0487730:intron | 15.0% |
!!! | ATACAAATTATTTTATTCAC+TGG | - | chr3_4:6868946-6868965 | None:intergenic | 15.0% |
!! | TCATTGTTTATAATTTGAAT+TGG | + | chr3_4:6869074-6869093 | Msa0487730:intron | 15.0% |
!! | AAGACTTTATAATAATGTTT+GGG | + | chr3_4:6869315-6869334 | Msa0487730:CDS | 15.0% |
!! | TAGATTTAGAAAACAAGTTA+GGG | - | chr3_4:6858181-6858200 | None:intergenic | 20.0% |
!! | TTAGATTTAGAAAACAAGTT+AGG | - | chr3_4:6858182-6858201 | None:intergenic | 20.0% |
!!! | TATCTTTTTCTGAATTTGTT+TGG | + | chr3_4:6858788-6858807 | Msa0487730:intron | 20.0% |
!!! | AATTTTGTTATAAACTCATC+TGG | - | chr3_4:6859070-6859089 | None:intergenic | 20.0% |
!! | GATGAGTTTATAACAAAATT+TGG | + | chr3_4:6859070-6859089 | Msa0487730:CDS | 20.0% |
!!! | AATTTTTGCAAAAGAAAACT+TGG | - | chr3_4:6859174-6859193 | None:intergenic | 20.0% |
!!! | AAGTTTTCTTTTGCAAAAAT+TGG | + | chr3_4:6859173-6859192 | Msa0487730:CDS | 20.0% |
!!! | TATTTAGATTTCAAGTATGA+AGG | + | chr3_4:6859235-6859254 | Msa0487730:intron | 20.0% |
!!! | ATTTAGATTTCAAGTATGAA+GGG | + | chr3_4:6859236-6859255 | Msa0487730:intron | 20.0% |
!!! | AAGCAAATTATTTTATTCAC+TGG | - | chr3_4:6859904-6859923 | None:intergenic | 20.0% |
!! | AACATTGTTATAAAATCTTC+AGG | - | chr3_4:6860257-6860276 | None:intergenic | 20.0% |
!!! | GAAGATTTTATAACAATGTT+TGG | + | chr3_4:6860257-6860276 | Msa0487730:CDS | 20.0% |
!!! | CAATACTATTCTTTAAGATA+CGG | + | chr3_4:6860395-6860414 | Msa0487730:CDS | 20.0% |
!! | TATAGGTAGAAATAAAAGAA+GGG | - | chr3_4:6860625-6860644 | None:intergenic | 20.0% |
!! | TTATAGGTAGAAATAAAAGA+AGG | - | chr3_4:6860626-6860645 | None:intergenic | 20.0% |
!!! | AGTCTCAAAATGTATTTTAT+GGG | - | chr3_4:6861200-6861219 | None:intergenic | 20.0% |
!!! | AAGTCTCAAAATGTATTTTA+TGG | - | chr3_4:6861201-6861220 | None:intergenic | 20.0% |
!! | AAATCTCAGAACATATTTAA+AGG | - | chr3_4:6861322-6861341 | None:intergenic | 20.0% |
!!! | AGTATCACAATTTTTTTTGT+AGG | - | chr3_4:6861631-6861650 | None:intergenic | 20.0% |
!!! | ATCTTGTCATTTTTATATTG+GGG | + | chr3_4:6861773-6861792 | Msa0487730:intron | 20.0% |
!! | TTAAAAGAAGAAGAAAGTAA+AGG | - | chr3_4:6862040-6862059 | None:intergenic | 20.0% |
!! | GAAGATTCATTGATAAATAA+AGG | + | chr3_4:6862117-6862136 | Msa0487730:intron | 20.0% |
!!! | AAAGATGACTAATTTTAAGT+GGG | - | chr3_4:6862324-6862343 | None:intergenic | 20.0% |
!!! | AAAAGATGACTAATTTTAAG+TGG | - | chr3_4:6862325-6862344 | None:intergenic | 20.0% |
!! | TTTAATATGAAGCTAGAATT+AGG | + | chr3_4:6863252-6863271 | Msa0487730:intron | 20.0% |
!!! | TTAGTTTAATTTGTGAATTG+TGG | + | chr3_4:6863357-6863376 | Msa0487730:intron | 20.0% |
!!! | TAGTTTAATTTGTGAATTGT+GGG | + | chr3_4:6863358-6863377 | Msa0487730:intron | 20.0% |
!! | TAAGTAAACTTAGTAGAAAA+AGG | - | chr3_4:6863534-6863553 | None:intergenic | 20.0% |
!!! | AATCTTTTTATAAACTCATC+TGG | - | chr3_4:6863750-6863769 | None:intergenic | 20.0% |
!! | GATGAGTTTATAAAAAGATT+TGG | + | chr3_4:6863750-6863769 | Msa0487730:CDS | 20.0% |
!!! | ACATTTACTTTTGTAACAAA+TGG | + | chr3_4:6863853-6863872 | Msa0487730:CDS | 20.0% |
!!! | GTTTTTTGGATTAAATTCTT+TGG | - | chr3_4:6864141-6864160 | None:intergenic | 20.0% |
!!! | GAATTTTGGAACAAAAATAA+GGG | - | chr3_4:6864163-6864182 | None:intergenic | 20.0% |
!!! | AGAATTTTGGAACAAAAATA+AGG | - | chr3_4:6864164-6864183 | None:intergenic | 20.0% |
!!! | TTTTTGTTCCAAAATTCTAA+TGG | + | chr3_4:6864166-6864185 | Msa0487730:CDS | 20.0% |
!!! | TTTTGTTCCAAAATTCTAAT+GGG | + | chr3_4:6864167-6864186 | Msa0487730:CDS | 20.0% |
!!! | ATAATTTCCCATTAGAATTT+TGG | - | chr3_4:6864177-6864196 | None:intergenic | 20.0% |
!! | TTTGGTATTTGATATTTACA+TGG | + | chr3_4:6864612-6864631 | Msa0487730:intron | 20.0% |
!! | ATTATAATAGATCATCATAG+TGG | + | chr3_4:6864927-6864946 | Msa0487730:intron | 20.0% |
!! | CTACTATAAAATGTAGTAAA+TGG | + | chr3_4:6865142-6865161 | Msa0487730:intron | 20.0% |
!!! | TATCCTTTTTTTATACTTGA+TGG | - | chr3_4:6865254-6865273 | None:intergenic | 20.0% |
!!! | TACAATGTACTTTAATTTGT+TGG | + | chr3_4:6865328-6865347 | Msa0487730:intron | 20.0% |
!!! | ATTTTCTAAAATTGAGTTGA+AGG | + | chr3_4:6865777-6865796 | Msa0487730:intron | 20.0% |
!! | AGTTTAAACACATGTAAAAA+TGG | + | chr3_4:6865812-6865831 | Msa0487730:intron | 20.0% |
!!! | GATATTGTTACTTCTAATTT+TGG | - | chr3_4:6865871-6865890 | None:intergenic | 20.0% |
!!! | AGAATTGATTTTGTAATGTT+TGG | - | chr3_4:6865943-6865962 | None:intergenic | 20.0% |
!!! | AAGTTTTTTGGTTATACTTT+TGG | - | chr3_4:6865993-6866012 | None:intergenic | 20.0% |
!! | TCTCTTCTATAAAATTGATT+GGG | - | chr3_4:6866083-6866102 | None:intergenic | 20.0% |
!! | AAATTGTCAAATTTAATGGA+GGG | - | chr3_4:6866115-6866134 | None:intergenic | 20.0% |
!! | TAAATTGTCAAATTTAATGG+AGG | - | chr3_4:6866116-6866135 | None:intergenic | 20.0% |
!! | CACTAAATTGTCAAATTTAA+TGG | - | chr3_4:6866119-6866138 | None:intergenic | 20.0% |
!!! | TGACTAATTTTTCTATACAT+TGG | - | chr3_4:6866473-6866492 | None:intergenic | 20.0% |
!!! | TGCCTAAATAATATTGATTT+AGG | + | chr3_4:6866914-6866933 | Msa0487730:intron | 20.0% |
!!! | GACAATTTTTATTTTTGTAC+TGG | + | chr3_4:6867169-6867188 | Msa0487730:intron | 20.0% |
!! | ATTAAATATATAGTGATGTG+AGG | - | chr3_4:6867355-6867374 | None:intergenic | 20.0% |
!! | AGTAACTGATAATATGAAAA+GGG | - | chr3_4:6867627-6867646 | None:intergenic | 20.0% |
!! | TAGTAACTGATAATATGAAA+AGG | - | chr3_4:6867628-6867647 | None:intergenic | 20.0% |
!! | ATGAGTTTATAACAAGATAT+GGG | + | chr3_4:6868041-6868060 | Msa0487730:CDS | 20.0% |
!!! | AAGTTTTCTTTTTCAACAAT+TGG | + | chr3_4:6868143-6868162 | Msa0487730:CDS | 20.0% |
!! | GAATACTATTCCATTTATTA+TGG | + | chr3_4:6868178-6868197 | Msa0487730:CDS | 20.0% |
!! | TAAGTAACAACCATAATAAA+TGG | - | chr3_4:6868191-6868210 | None:intergenic | 20.0% |
!!! | GGATTTTACTTTATAGTATT+TGG | + | chr3_4:6868422-6868441 | Msa0487730:intron | 20.0% |
!! | TTCATATTATATAGGTAGTT+TGG | + | chr3_4:6868846-6868865 | Msa0487730:intron | 20.0% |
!! | AACATTATTATAAAGTCTTC+TGG | - | chr3_4:6869314-6869333 | None:intergenic | 20.0% |
!! | GAAGACTTTATAATAATGTT+TGG | + | chr3_4:6869314-6869333 | Msa0487730:CDS | 20.0% |
!!! | GAATACTATTCTTTAAGATA+CGG | + | chr3_4:6869452-6869471 | Msa0487730:CDS | 20.0% |
!! | TGTCTAAAAATGCTTATAAA+AGG | + | chr3_4:6869666-6869685 | Msa0487730:CDS | 20.0% |
!! | GTCTAAAAATGCTTATAAAA+GGG | + | chr3_4:6869667-6869686 | Msa0487730:CDS | 20.0% |
!! | ATGGTTCATTATTTATAGTA+GGG | - | chr3_4:6870156-6870175 | None:intergenic | 20.0% |
! | TATGGCTTTCATAAAATGTT+TGG | - | chr3_4:6857949-6857968 | None:intergenic | 25.0% |
!! | ACTATCTCTTTTATATGATC+TGG | - | chr3_4:6857981-6858000 | None:intergenic | 25.0% |
!!! | AAACTTAGATTGAGTTGAAT+CGG | + | chr3_4:6858392-6858411 | Msa0487730:intron | 25.0% |
!!! | AAAAATCATGTTTTGAGTCA+AGG | + | chr3_4:6858462-6858481 | Msa0487730:intron | 25.0% |
!!! | TTTAGAATCATTTTTGTGGA+AGG | - | chr3_4:6858528-6858547 | None:intergenic | 25.0% |
!!! | CATGTTTAGAATCATTTTTG+TGG | - | chr3_4:6858532-6858551 | None:intergenic | 25.0% |
! | ACATAATATCATTTACAGAG+AGG | - | chr3_4:6858751-6858770 | None:intergenic | 25.0% |
! | CAACGGTTCAAATATTATAA+AGG | - | chr3_4:6859836-6859855 | None:intergenic | 25.0% |
! | TATAATATTTGAACCGTTGT+AGG | + | chr3_4:6859837-6859856 | Msa0487730:intron | 25.0% |
! | AGTAACTAAAAAACCTACAA+CGG | - | chr3_4:6859853-6859872 | None:intergenic | 25.0% |
! | AATAATAATGAACTCGTATG+TGG | - | chr3_4:6860002-6860021 | None:intergenic | 25.0% |
! | ACTATTTGTTTGTCATGAAT+GGG | - | chr3_4:6860146-6860165 | None:intergenic | 25.0% |
! | TACTATTTGTTTGTCATGAA+TGG | - | chr3_4:6860147-6860166 | None:intergenic | 25.0% |
! | TAACTCATCAGTTATACTAT+GGG | - | chr3_4:6860191-6860210 | None:intergenic | 25.0% |
! | ATAACTCATCAGTTATACTA+TGG | - | chr3_4:6860192-6860211 | None:intergenic | 25.0% |
!!! | ATGTTTACTTTTGCAACAAA+TGG | + | chr3_4:6860360-6860379 | Msa0487730:CDS | 25.0% |
! | AGGATTCTTTAAATTTGCAA+CGG | + | chr3_4:6860901-6860920 | Msa0487730:intron | 25.0% |
!! | CAAAATGTATTTTATGGGAT+TGG | - | chr3_4:6861195-6861214 | None:intergenic | 25.0% |
! | TCAAATTGAATCATACAGTA+AGG | - | chr3_4:6861238-6861257 | None:intergenic | 25.0% |
! | ATCACAAGTGGTAAAATTTA+AGG | - | chr3_4:6861444-6861463 | None:intergenic | 25.0% |
! | AAATTTGACATATTTCGACT+TGG | + | chr3_4:6861527-6861546 | Msa0487730:intron | 25.0% |
! | AATTTGACATATTTCGACTT+GGG | + | chr3_4:6861528-6861547 | Msa0487730:intron | 25.0% |
!!! | TATAAATACCACTCTAAGAT+TGG | + | chr3_4:6861564-6861583 | Msa0487730:intron | 25.0% |
!! | AGTAAAGGAGTATAAAAATG+AGG | - | chr3_4:6862025-6862044 | None:intergenic | 25.0% |
! | GGGAAAAATGAAAAACTTAA+AGG | - | chr3_4:6862162-6862181 | None:intergenic | 25.0% |
!!! | TTGAGACTTTTGAAACTTAA+AGG | - | chr3_4:6862193-6862212 | None:intergenic | 25.0% |
!! | TGAAACTTAAAGGATTTGTT+TGG | + | chr3_4:6862463-6862482 | Msa0487730:intron | 25.0% |
!! | GAAACTTAAAGGATTTGTTT+GGG | + | chr3_4:6862464-6862483 | Msa0487730:intron | 25.0% |
! | TTATGGTCAAATGCATATAA+AGG | - | chr3_4:6862540-6862559 | None:intergenic | 25.0% |
! | TAAAGTGAAATGAGTTTCAA+AGG | - | chr3_4:6862642-6862661 | None:intergenic | 25.0% |
! | GTTGAGACATAAACATATAT+AGG | - | chr3_4:6862847-6862866 | None:intergenic | 25.0% |
!!! | TCAAATAGTAGTGTTTTTTC+TGG | + | chr3_4:6862867-6862886 | Msa0487730:intron | 25.0% |
! | TTAGTGTTTCTTTCATTCAA+AGG | + | chr3_4:6863074-6863093 | Msa0487730:intron | 25.0% |
! | AAAGTCTCTTTATGATTGTT+TGG | + | chr3_4:6863403-6863422 | Msa0487730:intron | 25.0% |
! | AAGTCTCTTTATGATTGTTT+GGG | + | chr3_4:6863404-6863423 | Msa0487730:intron | 25.0% |
! | TAAACTTAGTAGAAAAAGGA+AGG | - | chr3_4:6863530-6863549 | None:intergenic | 25.0% |
! | TAAGTTTACTTATCTTCGTT+TGG | + | chr3_4:6863542-6863561 | Msa0487730:intron | 25.0% |
!! | GCATTTGAGATTTACATAAT+TGG | - | chr3_4:6863662-6863681 | None:intergenic | 25.0% |
! | TTTGCAGAATACTATTCTAT+AGG | + | chr3_4:6859202-6859221 | Msa0487730:CDS | 25.0% |
! | TTGCAGAATACTATTCTATA+GGG | + | chr3_4:6863883-6863902 | Msa0487730:CDS | 25.0% |
!!! | TTTGTACTTAGAGTTTTGAA+TGG | - | chr3_4:6863996-6864015 | None:intergenic | 25.0% |
! | TTCAAAACTCTAAGTACAAA+TGG | + | chr3_4:6863996-6864015 | Msa0487730:CDS | 25.0% |
!!! | GAACAAAAATAAGGGTTTTT+TGG | - | chr3_4:6864155-6864174 | None:intergenic | 25.0% |
! | AATTCTAATGGGAAATTATG+TGG | + | chr3_4:6864178-6864197 | Msa0487730:CDS | 25.0% |
! | ATCTGCAATGATAATATCAA+GGG | + | chr3_4:6864397-6864416 | Msa0487730:intron | 25.0% |
! | TCTATGTTTCATTGCTATAT+TGG | + | chr3_4:6864667-6864686 | Msa0487730:intron | 25.0% |
! | CTATGTTTCATTGCTATATT+GGG | + | chr3_4:6864668-6864687 | Msa0487730:intron | 25.0% |
!!! | ATTGGGATGTTTTTTCTTTT+TGG | + | chr3_4:6864685-6864704 | Msa0487730:intron | 25.0% |
! | TCAAAGATAAATTAAGTGGT+TGG | + | chr3_4:6864964-6864983 | Msa0487730:intron | 25.0% |
! | ATCACAAATAATTCATGGAA+TGG | - | chr3_4:6865611-6865630 | None:intergenic | 25.0% |
! | TAAACACATGTAAAAATGGA+TGG | + | chr3_4:6865816-6865835 | Msa0487730:intron | 25.0% |
! | AACTTTAAGTGAATCAAATC+TGG | + | chr3_4:6865892-6865911 | Msa0487730:intron | 25.0% |
!!! | TGCGTTACTAATAAGTTTTT+TGG | - | chr3_4:6866005-6866024 | None:intergenic | 25.0% |
! | GTCTCTTCTATAAAATTGAT+TGG | - | chr3_4:6866084-6866103 | None:intergenic | 25.0% |
! | ATGTTTGTATATACATCTAG+CGG | - | chr3_4:6866172-6866191 | None:intergenic | 25.0% |
!! | ATTTCAATCTTTTTATGGGT+TGG | + | chr3_4:6866202-6866221 | Msa0487730:intron | 25.0% |
!!! | TTTATCTCTTTTTCATTCTC+TGG | - | chr3_4:6866257-6866276 | None:intergenic | 25.0% |
!! | GAAAATTTGACCAAAAGTAT+TGG | + | chr3_4:6866544-6866563 | Msa0487730:intron | 25.0% |
! | TCATTTGCAACAGAATATTT+GGG | - | chr3_4:6866574-6866593 | None:intergenic | 25.0% |
! | TTCATTTGCAACAGAATATT+TGG | - | chr3_4:6866575-6866594 | None:intergenic | 25.0% |
!! | TGTGAATATGTCCAAATTTT+GGG | - | chr3_4:6866817-6866836 | None:intergenic | 25.0% |
!! | ATGTGAATATGTCCAAATTT+TGG | - | chr3_4:6866818-6866837 | None:intergenic | 25.0% |
! | TTCTTATAAATTTGACCAGA+TGG | - | chr3_4:6866992-6867011 | None:intergenic | 25.0% |
! | CATTGCATAAATGATGTATT+TGG | + | chr3_4:6867031-6867050 | Msa0487730:intron | 25.0% |
!! | CTTTTTCTTATAAATAGGAC+CGG | + | chr3_4:6867104-6867123 | Msa0487730:intron | 25.0% |
! | GATTCATATAAAAAGAAGAG+AGG | - | chr3_4:6867198-6867217 | None:intergenic | 25.0% |
!!! | AAATGTTTTGAATCTTTCTC+CGG | - | chr3_4:6867533-6867552 | None:intergenic | 25.0% |
!! | TATCTTGTTATAAACTCATC+TGG | - | chr3_4:6868040-6868059 | None:intergenic | 25.0% |
! | GATGAGTTTATAACAAGATA+TGG | + | chr3_4:6868040-6868059 | Msa0487730:CDS | 25.0% |
! | GATATTGAACTAAAGAAATG+TGG | + | chr3_4:6868115-6868134 | Msa0487730:CDS | 25.0% |
!! | AGTAATATCCTTTGATCTTT+TGG | - | chr3_4:6868344-6868363 | None:intergenic | 25.0% |
!!! | AACGAAAAGAAGTGTTTATT+GGG | - | chr3_4:6868378-6868397 | None:intergenic | 25.0% |
!! | TTTGAGTTACATTTATGATG+CGG | + | chr3_4:6868459-6868478 | Msa0487730:intron | 25.0% |
!! | ACTATTTCTTTGTCATGAAT+GGG | - | chr3_4:6869202-6869221 | None:intergenic | 25.0% |
!! | TACTATTTCTTTGTCATGAA+TGG | - | chr3_4:6869203-6869222 | None:intergenic | 25.0% |
!!! | ATGTTTACTTTTGCAACAAA+TGG | + | chr3_4:6860360-6860379 | Msa0487730:CDS | 25.0% |
!! | TGATTTTTGAACGAAAATGA+GGG | - | chr3_4:6869727-6869746 | None:intergenic | 25.0% |
!!! | GAATTTCACTTTCTAGTTTT+TGG | + | chr3_4:6869768-6869787 | Msa0487730:intron | 25.0% |
! | TATTGTGGAGCAAATATATA+AGG | - | chr3_4:6869862-6869881 | None:intergenic | 25.0% |
!! | TTAGAATTTACGAGCTTTAT+AGG | - | chr3_4:6869901-6869920 | None:intergenic | 25.0% |
! | ATAAAGCTCGTAAATTCTAA+TGG | + | chr3_4:6869901-6869920 | Msa0487730:CDS | 25.0% |
!! | AGGGATTTTCTCAATTTATA+AGG | + | chr3_4:6870010-6870029 | Msa0487730:CDS | 25.0% |
! | TTCATTATTTATAGTAGGGA+GGG | - | chr3_4:6870152-6870171 | None:intergenic | 25.0% |
! | CATGGTTCATTATTTATAGT+AGG | - | chr3_4:6870157-6870176 | None:intergenic | 25.0% |
! | AAATGTTTGGAATCTTTCTC+CGG | - | chr3_4:6857936-6857955 | None:intergenic | 30.0% |
! | ATCTCTTTTATATGATCTGG+AGG | - | chr3_4:6857978-6857997 | None:intergenic | 30.0% |
GAGAGTAGTTACTTAAATTG+TGG | + | chr3_4:6858573-6858592 | Msa0487730:intron | 30.0% | |
ATAGGAATAACTTCCAAAGA+GGG | - | chr3_4:6858619-6858638 | None:intergenic | 30.0% | |
AATAGGAATAACTTCCAAAG+AGG | - | chr3_4:6858620-6858639 | None:intergenic | 30.0% | |
TCTTTAACTGTGAAACTTTG+AGG | + | chr3_4:6858701-6858720 | Msa0487730:intron | 30.0% | |
! | TGAATTTGTTTGGACATTCA+AGG | + | chr3_4:6858798-6858817 | Msa0487730:intron | 30.0% |
!! | TTAGTGTGTCTTTAGTTCTA+AGG | + | chr3_4:6858854-6858873 | Msa0487730:intron | 30.0% |
!! | TAGTTCTAAGGTTCTCAAAA+TGG | + | chr3_4:6858866-6858885 | Msa0487730:intron | 30.0% |
CTTCAACTAAAGTTCTTGTT+TGG | - | chr3_4:6858929-6858948 | None:intergenic | 30.0% | |
!!! | AACGAAAACAAGGGTTTTTT+GGG | - | chr3_4:6859408-6859427 | None:intergenic | 30.0% |
AAGGGAAAACAATCTATCAA+AGG | + | chr3_4:6859690-6859709 | Msa0487730:CDS | 30.0% | |
CTTATCACTTATTGAATTGC+AGG | + | chr3_4:6860067-6860086 | Msa0487730:intron | 30.0% | |
!! | GGAATCCAAACATTTTAAGA+AGG | + | chr3_4:6860106-6860125 | Msa0487730:CDS | 30.0% |
TATGGCCTTCTTAAAATGTT+TGG | - | chr3_4:6860114-6860133 | None:intergenic | 30.0% | |
AAATTGGAATTGAAGAAACG+TGG | + | chr3_4:6860332-6860351 | Msa0487730:CDS | 30.0% | |
AATTGGAATTGAAGAAACGT+GGG | + | chr3_4:6860333-6860352 | Msa0487730:CDS | 30.0% | |
! | TTTGTTTCTCCATTAGTACT+TGG | - | chr3_4:6860515-6860534 | None:intergenic | 30.0% |
TACTAATGGAGAAACAAACA+CGG | + | chr3_4:6860517-6860536 | Msa0487730:CDS | 30.0% | |
AGCATTAATATACTGCACAA+GGG | - | chr3_4:6860765-6860784 | None:intergenic | 30.0% | |
!! | ACGGACAACAATTTGTTAAA+CGG | + | chr3_4:6860920-6860939 | Msa0487730:intron | 30.0% |
TCACCAACTATGACATTATT+AGG | + | chr3_4:6861024-6861043 | Msa0487730:intron | 30.0% | |
! | ATAGAATGCTTTTGCTCATT+TGG | + | chr3_4:6861079-6861098 | Msa0487730:intron | 30.0% |
ATAATCACTGATGGAAAGTT+TGG | + | chr3_4:6861269-6861288 | Msa0487730:intron | 30.0% | |
TTTACCACTTGTGATAAAAG+TGG | + | chr3_4:6861449-6861468 | Msa0487730:intron | 30.0% | |
TTACCACTTGTGATAAAAGT+GGG | + | chr3_4:6861450-6861469 | Msa0487730:intron | 30.0% | |
AAAACTTTCCAATCTTAGAG+TGG | - | chr3_4:6861575-6861594 | None:intergenic | 30.0% | |
CGTTGAAGAATAAACGAATA+AGG | - | chr3_4:6861683-6861702 | None:intergenic | 30.0% | |
AATCAGTCACAATATTCTTG+CGG | + | chr3_4:6861715-6861734 | Msa0487730:intron | 30.0% | |
! | GGGACAAATATTTTCTCTTT+TGG | + | chr3_4:6861793-6861812 | Msa0487730:intron | 30.0% |
!!! | TTTTCTCTTTTGGTAGTGAT+CGG | + | chr3_4:6861803-6861822 | Msa0487730:intron | 30.0% |
AAAGGTCAAAATGCATCTAA+AGG | + | chr3_4:6862135-6862154 | Msa0487730:intron | 30.0% | |
!! | GTTTTTCATTTTTCCCAAAG+TGG | + | chr3_4:6862166-6862185 | Msa0487730:intron | 30.0% |
!! | ACTAATTTTAAGTGGGTGTT+AGG | - | chr3_4:6862317-6862336 | None:intergenic | 30.0% |
!! | ATCTTTTTAGGCATGACAAA+TGG | + | chr3_4:6862338-6862357 | Msa0487730:intron | 30.0% |
! | TTTCAAACAAGTCCTTTTAG+AGG | - | chr3_4:6862408-6862427 | None:intergenic | 30.0% |
!!! | TTGGGACTTTTGAAACTTAA+AGG | + | chr3_4:6862453-6862472 | Msa0487730:intron | 30.0% |
!!! | TTGGGACTTTTGAAACTTAA+AGG | + | chr3_4:6862453-6862472 | Msa0487730:intron | 30.0% |
GGGAAAAACGAAAAACTTAA+AGG | + | chr3_4:6862513-6862532 | Msa0487730:intron | 30.0% | |
! | GAGTTAGTTTAGTGTATGTT+TGG | + | chr3_4:6863128-6863147 | Msa0487730:intron | 30.0% |
!! | TGTATGTTTGGTTTCACTTT+TGG | + | chr3_4:6863140-6863159 | Msa0487730:intron | 30.0% |
!! | TTTGGTTTCACTTTTGGATA+AGG | + | chr3_4:6863146-6863165 | Msa0487730:intron | 30.0% |
TTGAATTGAAAGTGACTACA+TGG | + | chr3_4:6863292-6863311 | Msa0487730:intron | 30.0% | |
AGTCTCTTTATGATTGTTTG+GGG | + | chr3_4:6863405-6863424 | Msa0487730:intron | 30.0% | |
AATTGAACCAAATCGAAACT+AGG | + | chr3_4:6863621-6863640 | Msa0487730:intron | 30.0% | |
AATTCGGTCCTATACTATAA+CGG | + | chr3_4:6863698-6863717 | Msa0487730:intron | 30.0% | |
GAATACTATTCTATAGGGTA+TGG | + | chr3_4:6863888-6863907 | Msa0487730:CDS | 30.0% | |
! | TTCATATTTGAAACACAGGA+AGG | - | chr3_4:6863916-6863935 | None:intergenic | 30.0% |
TTCCTGTGTTTCAAATATGA+AGG | + | chr3_4:6863915-6863934 | Msa0487730:CDS | 30.0% | |
TCCTGTGTTTCAAATATGAA+GGG | + | chr3_4:6863916-6863935 | Msa0487730:CDS | 30.0% | |
!!! | TGAGAATTTTGGAGCTTTAT+AGG | - | chr3_4:6864326-6864345 | None:intergenic | 30.0% |
ATAAAGCTCCAAAATTCTCA+AGG | + | chr3_4:6864326-6864345 | Msa0487730:intron | 30.0% | |
CATCTGCAATGATAATATCA+AGG | + | chr3_4:6864396-6864415 | Msa0487730:intron | 30.0% | |
TCTGCAATGATAATATCAAG+GGG | + | chr3_4:6864398-6864417 | Msa0487730:intron | 30.0% | |
GGGATTTACTGTATTTCAAA+GGG | + | chr3_4:6864418-6864437 | Msa0487730:intron | 30.0% | |
GGATTTACTGTATTTCAAAG+GGG | + | chr3_4:6864419-6864438 | Msa0487730:intron | 30.0% | |
! | TAATAGATCATCATAGTGGA+AGG | + | chr3_4:6864931-6864950 | Msa0487730:intron | 30.0% |
TGTAGTAAATGGCATCTAAA+TGG | + | chr3_4:6865153-6865172 | Msa0487730:intron | 30.0% | |
TAAATGGCATCTAAATGGAA+TGG | + | chr3_4:6865158-6865177 | Msa0487730:intron | 30.0% | |
GATAACAGACCAAAAAGTTT+AGG | + | chr3_4:6865204-6865223 | Msa0487730:intron | 30.0% | |
! | ACCAAAAAGTTTAGGATCTA+TGG | + | chr3_4:6865212-6865231 | Msa0487730:intron | 30.0% |
! | TCCATAGATCCTAAACTTTT+TGG | - | chr3_4:6865216-6865235 | None:intergenic | 30.0% |
!!! | TTTTTTATACTTGATGGCAG+TGG | - | chr3_4:6865248-6865267 | None:intergenic | 30.0% |
CTGCCATCAAGTATAAAAAA+AGG | + | chr3_4:6865248-6865267 | Msa0487730:intron | 30.0% | |
GGATAGTGACAATGATTAAA+TGG | + | chr3_4:6865277-6865296 | Msa0487730:intron | 30.0% | |
GAAAGTCTCAAGTATCTTAT+GGG | - | chr3_4:6865371-6865390 | None:intergenic | 30.0% | |
TGAAAGTCTCAAGTATCTTA+TGG | - | chr3_4:6865372-6865391 | None:intergenic | 30.0% | |
GAATCAGGAAGTAATTAGTT+TGG | + | chr3_4:6865449-6865468 | Msa0487730:intron | 30.0% | |
!!! | TCGATCTCTAGAATCAATTT+TGG | + | chr3_4:6865962-6865981 | Msa0487730:intron | 30.0% |
!!! | CGATCTCTAGAATCAATTTT+GGG | + | chr3_4:6865963-6865982 | Msa0487730:intron | 30.0% |
TGTTTGTATATACATCTAGC+GGG | - | chr3_4:6866171-6866190 | None:intergenic | 30.0% | |
! | GTAATCTTTTAGTCGTTGTT+TGG | - | chr3_4:6866515-6866534 | None:intergenic | 30.0% |
! | TTTGGGAATACCAATACTTT+TGG | - | chr3_4:6866557-6866576 | None:intergenic | 30.0% |
CTTGACAGATACATAATAGT+TGG | - | chr3_4:6866598-6866617 | None:intergenic | 30.0% | |
CAACTATTATGTATCTGTCA+AGG | + | chr3_4:6866596-6866615 | Msa0487730:intron | 30.0% | |
! | TGAATATGTCCAAATTTTGG+GGG | - | chr3_4:6866815-6866834 | None:intergenic | 30.0% |
! | GTGAATATGTCCAAATTTTG+GGG | - | chr3_4:6866816-6866835 | None:intergenic | 30.0% |
TAAATAAGTAACTCTCCATC+TGG | + | chr3_4:6866974-6866993 | Msa0487730:intron | 30.0% | |
!! | TATTTTGAGAAGAAAGACAG+AGG | - | chr3_4:6867300-6867319 | None:intergenic | 30.0% |
AACTTTCGACACATTTCTTT+CGG | + | chr3_4:6867417-6867436 | Msa0487730:intron | 30.0% | |
! | ACTATCTCTTTTGTATGATC+TGG | - | chr3_4:6867578-6867597 | None:intergenic | 30.0% |
AGTTTAACTGTGAAACTTTG+AGG | + | chr3_4:6867650-6867669 | Msa0487730:intron | 30.0% | |
! | TTGTCACTATTTTGCTTCTT+TGG | + | chr3_4:6867790-6867809 | Msa0487730:intron | 30.0% |
! | GGACATTCATTTTCATTCTA+AGG | + | chr3_4:6867811-6867830 | Msa0487730:intron | 30.0% |
! | TACTTAGATTTCAAGTACGA+AGG | + | chr3_4:6868205-6868224 | Msa0487730:intron | 30.0% |
TTTCTTATCCATTCCAAACT+TGG | + | chr3_4:6868275-6868294 | Msa0487730:CDS | 30.0% | |
AGATCAAAGGATATTACTTG+TGG | + | chr3_4:6868346-6868365 | Msa0487730:CDS | 30.0% | |
!! | GAACGAAAAGAAGTGTTTAT+TGG | - | chr3_4:6868379-6868398 | None:intergenic | 30.0% |
!!! | TGAGAATTTTGAAGCATGAA+CGG | - | chr3_4:6868559-6868578 | None:intergenic | 30.0% |
TTCATGCTTCAAAATTCTCA+AGG | + | chr3_4:6868559-6868578 | Msa0487730:CDS | 30.0% | |
! | TGTTTTCCCTAAGAAATCTA+CGG | - | chr3_4:6868654-6868673 | None:intergenic | 30.0% |
TTTACTTTAAGCTGATCAAG+AGG | + | chr3_4:6868695-6868714 | Msa0487730:CDS | 30.0% | |
ACATCAGTTCAGATATTAGA+AGG | - | chr3_4:6868819-6868838 | None:intergenic | 30.0% | |
CTTCTGTTACTAAATACACT+TGG | - | chr3_4:6868913-6868932 | None:intergenic | 30.0% | |
ATGAATAATGAACTCGTATG+TGG | - | chr3_4:6869058-6869077 | None:intergenic | 30.0% | |
CATATCACTTATTGAATTGC+AGG | + | chr3_4:6869123-6869142 | Msa0487730:intron | 30.0% | |
!! | GGAATCCAAACATTTTAAGA+AGG | + | chr3_4:6860106-6860125 | Msa0487730:CDS | 30.0% |
TATGGCCTTCTTAAAATGTT+TGG | - | chr3_4:6860114-6860133 | None:intergenic | 30.0% | |
TCATCAGTTATACTATGAGA+GGG | - | chr3_4:6869245-6869264 | None:intergenic | 30.0% | |
! | AAAATGGACTTGAAGAAATG+TGG | + | chr3_4:6869389-6869408 | Msa0487730:CDS | 30.0% |
AAACAAACAATGAGTGTTCT+AGG | + | chr3_4:6869585-6869604 | Msa0487730:CDS | 30.0% | |
! | GTGATTTTTGAACGAAAATG+AGG | - | chr3_4:6869728-6869747 | None:intergenic | 30.0% |
! | TTTTCGTTCAAAAATCACCA+CGG | + | chr3_4:6869730-6869749 | Msa0487730:CDS | 30.0% |
! | ACATTTAGCTTCAGATATTG+TGG | - | chr3_4:6869877-6869896 | None:intergenic | 30.0% |
TAAATTCTAATGGAGATGAG+TGG | + | chr3_4:6869911-6869930 | Msa0487730:CDS | 30.0% | |
AAATTCTAATGGAGATGAGT+GGG | + | chr3_4:6869912-6869931 | Msa0487730:CDS | 30.0% | |
GTTCATTATTTATAGTAGGG+AGG | - | chr3_4:6870153-6870172 | None:intergenic | 30.0% | |
AAGATTAGAATCCTATAAGC+AGG | + | chr3_4:6870260-6870279 | Msa0487730:three_prime_UTR | 30.0% | |
! | TCTTTTATATGATCTGGAGG+AGG | - | chr3_4:6857975-6857994 | None:intergenic | 35.0% |
ACTCTAACTGTCAAACTTTG+AGG | + | chr3_4:6858066-6858085 | Msa0487730:intron | 35.0% | |
ATAAATGTGTAACCCCTCTT+TGG | + | chr3_4:6858603-6858622 | Msa0487730:intron | 35.0% | |
TAGGAATAACTTCCAAAGAG+GGG | - | chr3_4:6858618-6858637 | None:intergenic | 35.0% | |
GTCTCTAAACTTCAAAAGAG+AGG | - | chr3_4:6858999-6859018 | None:intergenic | 35.0% | |
CAACTCATCTGTTACAGTAT+AGG | - | chr3_4:6859021-6859040 | None:intergenic | 35.0% | |
GATATGGAACTGAAGAAATG+TGG | + | chr3_4:6859145-6859164 | Msa0487730:CDS | 35.0% | |
CTTATTCATTCAAAACTCCG+AGG | + | chr3_4:6859308-6859327 | Msa0487730:CDS | 35.0% | |
!!! | GTTTTTTGGGTTGATTCCAT+TGG | - | chr3_4:6859395-6859414 | None:intergenic | 35.0% |
!!! | GAACGAAAACAAGGGTTTTT+TGG | - | chr3_4:6859409-6859428 | None:intergenic | 35.0% |
! | ACTGCTTTCCTTGAGAATTT+TGG | - | chr3_4:6859597-6859616 | None:intergenic | 35.0% |
AAAATTCTCAAGGAAAGCAG+TGG | + | chr3_4:6859596-6859615 | Msa0487730:CDS | 35.0% | |
AAATTCTCAAGGAAAGCAGT+GGG | + | chr3_4:6859597-6859616 | Msa0487730:CDS | 35.0% | |
GTGGGAAGTTTCTTGTATAT+CGG | + | chr3_4:6859615-6859634 | Msa0487730:CDS | 35.0% | |
TGGATTCTGTAGATTTGCAA+GGG | + | chr3_4:6859672-6859691 | Msa0487730:CDS | 35.0% | |
GCTATCATCAATGAGCAATA+TGG | + | chr3_4:6859877-6859896 | Msa0487730:intron | 35.0% | |
TGCGAAAGAAAACACACTTA+GGG | - | chr3_4:6859956-6859975 | None:intergenic | 35.0% | |
TTGCGAAAGAAAACACACTT+AGG | - | chr3_4:6859957-6859976 | None:intergenic | 35.0% | |
ATCACTTATTGAATTGCAGG+CGG | + | chr3_4:6860070-6860089 | Msa0487730:intron | 35.0% | |
TCATCAGTTATACTATGGGA+GGG | - | chr3_4:6860187-6860206 | None:intergenic | 35.0% | |
AATTTCCAAGTAAGACCATC+AGG | - | chr3_4:6860317-6860336 | None:intergenic | 35.0% | |
! | TGATGGTCTTACTTGGAAAT+TGG | + | chr3_4:6860316-6860335 | Msa0487730:CDS | 35.0% |
ATTGGAATTGAAGAAACGTG+GGG | + | chr3_4:6860334-6860353 | Msa0487730:CDS | 35.0% | |
TTCCTGTCTTTCGAATATGA+AGG | + | chr3_4:6860422-6860441 | Msa0487730:CDS | 35.0% | |
TCCTGTCTTTCGAATATGAA+GGG | + | chr3_4:6860423-6860442 | Msa0487730:CDS | 35.0% | |
!!! | TTAGTACTTGGAGTTTTGAG+TGG | - | chr3_4:6860503-6860522 | None:intergenic | 35.0% |
CTCAAAACTCCAAGTACTAA+TGG | + | chr3_4:6860503-6860522 | Msa0487730:CDS | 35.0% | |
! | AGCATAATTGATTTCAACCC+TGG | - | chr3_4:6860567-6860586 | None:intergenic | 35.0% |
TACCTATAAGCATAGTACTG+TGG | + | chr3_4:6860637-6860656 | Msa0487730:CDS | 35.0% | |
CAGCATTAATATACTGCACA+AGG | - | chr3_4:6860766-6860785 | None:intergenic | 35.0% | |
! | ATTGCTCTCCATTGCAATTT+TGG | - | chr3_4:6860832-6860851 | None:intergenic | 35.0% |
AAAATTGCAATGGAGAGCAA+TGG | + | chr3_4:6860831-6860850 | Msa0487730:intron | 35.0% | |
AAATTGCAATGGAGAGCAAT+GGG | + | chr3_4:6860832-6860851 | Msa0487730:intron | 35.0% | |
!! | GATGTTTGTTGTACACGTTT+AGG | + | chr3_4:6860854-6860873 | Msa0487730:intron | 35.0% |
GTTAAACGGTGATAAATGCA+AGG | + | chr3_4:6860934-6860953 | Msa0487730:intron | 35.0% | |
GAGCCTAATAATGTCATAGT+TGG | - | chr3_4:6861030-6861049 | None:intergenic | 35.0% | |
TGTAAACCATTGTCTTCCAA+TGG | + | chr3_4:6861113-6861132 | Msa0487730:intron | 35.0% | |
CTTTCCATCAGTGATTATGA+AGG | - | chr3_4:6861267-6861286 | None:intergenic | 35.0% | |
GGTTTGATATATACCAAAGC+TGG | + | chr3_4:6861290-6861309 | Msa0487730:intron | 35.0% | |
TACCACTTGTGATAAAAGTG+GGG | + | chr3_4:6861451-6861470 | Msa0487730:intron | 35.0% | |
! | GCTCATACTATTGACTAACT+TGG | + | chr3_4:6861479-6861498 | Msa0487730:intron | 35.0% |
ATCAGTCACAATATTCTTGC+GGG | + | chr3_4:6861716-6861735 | Msa0487730:intron | 35.0% | |
!!! | TTTCTCTTTTGGTAGTGATC+GGG | + | chr3_4:6861804-6861823 | Msa0487730:intron | 35.0% |
TGAACATAGTTCAGTTGGTT+TGG | - | chr3_4:6861855-6861874 | None:intergenic | 35.0% | |
ACTAGTGAACATAGTTCAGT+TGG | - | chr3_4:6861860-6861879 | None:intergenic | 35.0% | |
! | GAGTCTCACAATTTTCTCAA+GGG | - | chr3_4:6861947-6861966 | None:intergenic | 35.0% |
! | AGAGTCTCACAATTTTCTCA+AGG | - | chr3_4:6861948-6861967 | None:intergenic | 35.0% |
GAAACTTAAAGGACCACTTT+GGG | - | chr3_4:6862182-6862201 | None:intergenic | 35.0% | |
TGAAACTTAAAGGACCACTT+TGG | - | chr3_4:6862183-6862202 | None:intergenic | 35.0% | |
CCAACTATGCTATCTACAAT+AGG | - | chr3_4:6862253-6862272 | None:intergenic | 35.0% | |
CCTATTGTAGATAGCATAGT+TGG | + | chr3_4:6862250-6862269 | Msa0487730:intron | 35.0% | |
CATCACCATTATCCTCTAAA+AGG | + | chr3_4:6862393-6862412 | Msa0487730:intron | 35.0% | |
!! | CAAGTCCTTTTAGAGGATAA+TGG | - | chr3_4:6862401-6862420 | None:intergenic | 35.0% |
TGAAACTTAAAGGACGACTT+TGG | + | chr3_4:6862492-6862511 | Msa0487730:intron | 35.0% | |
GAAACTTAAAGGACGACTTT+GGG | + | chr3_4:6862493-6862512 | Msa0487730:intron | 35.0% | |
AACAAGTGAACAAACAATGC+AGG | + | chr3_4:6862682-6862701 | Msa0487730:intron | 35.0% | |
ACTAATTGAGTGCCATGAAT+GGG | - | chr3_4:6862785-6862804 | None:intergenic | 35.0% | |
TACTAATTGAGTGCCATGAA+TGG | - | chr3_4:6862786-6862805 | None:intergenic | 35.0% | |
AACCAGATTCACAAAAGCAA+TGG | - | chr3_4:6862996-6863015 | None:intergenic | 35.0% | |
AATTGAAAGTGACTACATGG+TGG | + | chr3_4:6863295-6863314 | Msa0487730:intron | 35.0% | |
CAATCATAAAGAGACTTTCG+AGG | - | chr3_4:6863401-6863420 | None:intergenic | 35.0% | |
ATGATGACCTGTTCTGTTTA+AGG | + | chr3_4:6863499-6863518 | Msa0487730:intron | 35.0% | |
GGATAAACCTTAAACAGAAC+AGG | - | chr3_4:6863509-6863528 | None:intergenic | 35.0% | |
!! | CTTATCTTCGTTTGGTTCTA+TGG | + | chr3_4:6863550-6863569 | Msa0487730:intron | 35.0% |
TATTGCTCCTAGTTTCGATT+TGG | - | chr3_4:6863631-6863650 | None:intergenic | 35.0% | |
! | AGTATAGGACCGAATTTTAG+AGG | - | chr3_4:6863694-6863713 | None:intergenic | 35.0% |
CAGTTCATCCGTTATAGTAT+AGG | - | chr3_4:6863709-6863728 | None:intergenic | 35.0% | |
GAAATGGAACTGAAGAAATG+CGG | + | chr3_4:6863825-6863844 | Msa0487730:CDS | 35.0% | |
CCTGTGTTTCAAATATGAAG+GGG | + | chr3_4:6863917-6863936 | Msa0487730:CDS | 35.0% | |
AGTGTCATAGTCGTAGAAAA+AGG | + | chr3_4:6864033-6864052 | Msa0487730:CDS | 35.0% | |
AAGTGAGAGTCATGAGAAAA+AGG | + | chr3_4:6864070-6864089 | Msa0487730:CDS | 35.0% | |
AGTGAGAGTCATGAGAAAAA+GGG | + | chr3_4:6864071-6864090 | Msa0487730:CDS | 35.0% | |
TAATGGGAAATTATGTGGTG+AGG | + | chr3_4:6864183-6864202 | Msa0487730:intron | 35.0% | |
AATGTGCAGTATGTTAATGC+TGG | + | chr3_4:6864269-6864288 | Msa0487730:intron | 35.0% | |
! | TGGAGCTTTATAGGAACATT+TGG | - | chr3_4:6864317-6864336 | None:intergenic | 35.0% |
! | CATTGCAGATGATGATGATT+TGG | - | chr3_4:6864387-6864406 | None:intergenic | 35.0% |
GGGGATTTACTGTATTTCAA+AGG | + | chr3_4:6864417-6864436 | Msa0487730:intron | 35.0% | |
! | ATTGTGACTTTTAGCACATC+CGG | - | chr3_4:6864497-6864516 | None:intergenic | 35.0% |
TGTCTCATTCATCATCAAAG+TGG | - | chr3_4:6864569-6864588 | None:intergenic | 35.0% | |
! | ATTCACGTTACACGTTGTTT+TGG | + | chr3_4:6864594-6864613 | Msa0487730:intron | 35.0% |
AATTTCTCAAGCTTCTCGTA+GGG | - | chr3_4:6864730-6864749 | None:intergenic | 35.0% | |
ACCTACAATCCCATAAGATA+GGG | + | chr3_4:6865021-6865040 | Msa0487730:intron | 35.0% | |
TACATAGGTTGTGAGTTTAG+TGG | + | chr3_4:6865070-6865089 | Msa0487730:intron | 35.0% | |
TCTCAAGTATCTTATGGGAT+TGG | - | chr3_4:6865366-6865385 | None:intergenic | 35.0% | |
TACAACGTCCTAATCATTGT+TGG | + | chr3_4:6865559-6865578 | Msa0487730:intron | 35.0% | |
! | AGTTGATGCCAACAATGATT+AGG | - | chr3_4:6865570-6865589 | None:intergenic | 35.0% |
ATCGACCTAGAAATATTGTG+AGG | + | chr3_4:6865642-6865661 | Msa0487730:intron | 35.0% | |
TCGACCTAGAAATATTGTGA+GGG | + | chr3_4:6865643-6865662 | Msa0487730:intron | 35.0% | |
TGAACCCTCACAATATTTCT+AGG | - | chr3_4:6865650-6865669 | None:intergenic | 35.0% | |
GAAATATTGTGAGGGTTCAA+TGG | + | chr3_4:6865651-6865670 | Msa0487730:intron | 35.0% | |
AGTAACGCACAATTTGAACA+CGG | + | chr3_4:6866016-6866035 | Msa0487730:intron | 35.0% | |
!!! | TTTTTATGGGTTGGTAGCTT+TGG | + | chr3_4:6866211-6866230 | Msa0487730:intron | 35.0% |
ACTATGTGACTCTGATGTAT+TGG | - | chr3_4:6866376-6866395 | None:intergenic | 35.0% | |
!! | AGATCGGTTTCTCTTTTCAT+AGG | - | chr3_4:6866405-6866424 | None:intergenic | 35.0% |
! | GTCAAAAGTATGACCATTCT+TGG | + | chr3_4:6866489-6866508 | Msa0487730:intron | 35.0% |
CTATTATGTATCTGTCAAGG+CGG | + | chr3_4:6866599-6866618 | Msa0487730:intron | 35.0% | |
!!! | CCTTCTAATTTTAACTCAGC+CGG | - | chr3_4:6866660-6866679 | None:intergenic | 35.0% |
GAGAAAGAAGAAGAAGAAAC+AGG | - | chr3_4:6866697-6866716 | None:intergenic | 35.0% | |
ATAGTGCTTTCAGATAGACT+TGG | + | chr3_4:6866723-6866742 | Msa0487730:intron | 35.0% | |
! | GAATATGTCCAAATTTTGGG+GGG | - | chr3_4:6866814-6866833 | None:intergenic | 35.0% |
TTTCTTATAAATAGGACCGG+AGG | + | chr3_4:6867107-6867126 | Msa0487730:intron | 35.0% | |
TTCTTATAAATAGGACCGGA+GGG | + | chr3_4:6867108-6867127 | Msa0487730:intron | 35.0% | |
AATTAAAGAACTACTCCCTC+CGG | - | chr3_4:6867126-6867145 | None:intergenic | 35.0% | |
! | TCTCTTTTGTATGATCTGGA+GGG | - | chr3_4:6867574-6867593 | None:intergenic | 35.0% |
! | ATCTCTTTTGTATGATCTGG+AGG | - | chr3_4:6867575-6867594 | None:intergenic | 35.0% |
GTAAGTTAGTGTATACAGAG+AGG | - | chr3_4:6867703-6867722 | None:intergenic | 35.0% | |
GAACTCATCTATTACACTAC+AGG | - | chr3_4:6867999-6868018 | None:intergenic | 35.0% | |
AATATCCCAATCACAACCAT+CGG | - | chr3_4:6868101-6868120 | None:intergenic | 35.0% | |
ACTAGGAACATACTACACAA+TGG | - | chr3_4:6868503-6868522 | None:intergenic | 35.0% | |
!! | TGTTCCTAGTGAATTTGCTA+AGG | + | chr3_4:6868513-6868532 | Msa0487730:CDS | 35.0% |
AAAATTCTCAAGGAAAGCAG+TGG | + | chr3_4:6859596-6859615 | Msa0487730:CDS | 35.0% | |
AAATTCTCAAGGAAAGCAGT+GGG | + | chr3_4:6859597-6859616 | Msa0487730:CDS | 35.0% | |
ATGGAATCCGTAGATTTCTT+AGG | + | chr3_4:6868644-6868663 | Msa0487730:CDS | 35.0% | |
TGGAATCCGTAGATTTCTTA+GGG | + | chr3_4:6868645-6868664 | Msa0487730:CDS | 35.0% | |
AGGGAAAACAAGTTATCAGA+TGG | + | chr3_4:6868664-6868683 | Msa0487730:CDS | 35.0% | |
! | TTTTCATTCGCAACATGAAC+CGG | + | chr3_4:6869015-6869034 | Msa0487730:intron | 35.0% |
ATCACTTATTGAATTGCAGG+CGG | + | chr3_4:6860070-6860089 | Msa0487730:intron | 35.0% | |
CTCATCAGTTATACTATGAG+AGG | - | chr3_4:6869246-6869265 | None:intergenic | 35.0% | |
TGTTGTTACAGTTACTGTTC+TGG | + | chr3_4:6869352-6869371 | Msa0487730:CDS | 35.0% | |
!! | GGATGGTCTTATTTGGAAAA+TGG | + | chr3_4:6869373-6869392 | Msa0487730:CDS | 35.0% |
TTCCTGTCTTTCAAATACGA+AGG | + | chr3_4:6869479-6869498 | Msa0487730:intron | 35.0% | |
TCCTGTCTTTCAAATACGAA+GGG | + | chr3_4:6869480-6869499 | Msa0487730:intron | 35.0% | |
! | CTACTACTTGGAGTTTTTGA+TGG | - | chr3_4:6869560-6869579 | None:intergenic | 35.0% |
TCAAAAACTCCAAGTAGTAG+TGG | + | chr3_4:6869560-6869579 | Msa0487730:CDS | 35.0% | |
! | TTTGTTTCTCCACTACTACT+TGG | - | chr3_4:6869572-6869591 | None:intergenic | 35.0% |
AAGTGAGAGTCAAGGAAATA+AGG | + | chr3_4:6869634-6869653 | Msa0487730:CDS | 35.0% | |
! | AACGAAAATGAGGGTTTTTC+GGG | - | chr3_4:6869718-6869737 | None:intergenic | 35.0% |
! | GAACGAAAATGAGGGTTTTT+CGG | - | chr3_4:6869719-6869738 | None:intergenic | 35.0% |
TTTCGTTCAAAAATCACCAC+GGG | + | chr3_4:6869731-6869750 | Msa0487730:CDS | 35.0% | |
GGAGGAAAGATCAATTTCAA+TGG | - | chr3_4:6869824-6869843 | None:intergenic | 35.0% | |
ATAAGGAACATACTGCACAA+TGG | - | chr3_4:6869845-6869864 | None:intergenic | 35.0% | |
TATTTGCATTGCTGATGACT+CGG | - | chr3_4:6869986-6870005 | None:intergenic | 35.0% | |
AAAAGTCACGATATTTCGTG+TGG | + | chr3_4:6870098-6870117 | Msa0487730:CDS | 35.0% | |
AGAATATTACCACATGTAGC+AGG | - | chr3_4:6870186-6870205 | None:intergenic | 35.0% | |
TCTGTGTTTGATTGCTGTAA+TGG | + | chr3_4:6870203-6870222 | Msa0487730:three_prime_UTR | 35.0% | |
CTGTGTTTGATTGCTGTAAT+GGG | + | chr3_4:6870204-6870223 | Msa0487730:three_prime_UTR | 35.0% | |
!!! | TAATGGGTTTTTCTGCTTGT+TGG | + | chr3_4:6870220-6870239 | Msa0487730:three_prime_UTR | 35.0% |
AGAATCCTATAAGCAGGTTT+AGG | + | chr3_4:6870266-6870285 | Msa0487730:three_prime_UTR | 35.0% | |
CAATTCCTAAACCTGCTTAT+AGG | - | chr3_4:6870274-6870293 | None:intergenic | 35.0% | |
TAAGCAGGTTTAGGAATTGT+TGG | + | chr3_4:6870275-6870294 | Msa0487730:three_prime_UTR | 35.0% | |
TGTCCATGAATCCAAAACAC+AGG | - | chr3_4:6858291-6858310 | None:intergenic | 40.0% | |
ATGGAACTGAAGAAATGTGG+CGG | + | chr3_4:6859148-6859167 | Msa0487730:CDS | 40.0% | |
TTCAAAACTCCGAGGACTAA+TGG | + | chr3_4:6859316-6859335 | Msa0487730:CDS | 40.0% | |
!! | TTTGGTTCTCCATTAGTCCT+CGG | - | chr3_4:6859328-6859347 | None:intergenic | 40.0% |
CACTGCTTCCAAAAGATCAA+AGG | + | chr3_4:6859363-6859382 | Msa0487730:CDS | 40.0% | |
!! | AGGCTTTGGAACGAAAACAA+GGG | - | chr3_4:6859417-6859436 | None:intergenic | 40.0% |
!! | AAGGCTTTGGAACGAAAACA+AGG | - | chr3_4:6859418-6859437 | None:intergenic | 40.0% |
! | TGTTTTCGTTCCAAAGCCTT+TGG | + | chr3_4:6859418-6859437 | Msa0487730:CDS | 40.0% |
AGGAACATACTACACAATGG+AGG | - | chr3_4:6859533-6859552 | None:intergenic | 40.0% | |
TCCATTGTGTAGTATGTTCC+TGG | + | chr3_4:6859532-6859551 | Msa0487730:intron | 40.0% | |
ACCAGGAACATACTACACAA+TGG | - | chr3_4:6859536-6859555 | None:intergenic | 40.0% | |
!! | TGTTCCTGGTGAATTTGCTA+AGG | + | chr3_4:6859546-6859565 | Msa0487730:CDS | 40.0% |
!!! | GAATTTTGGAGCATGACCTT+TGG | - | chr3_4:6859583-6859602 | None:intergenic | 40.0% |
GTCATGCTCCAAAATTCTCA+AGG | + | chr3_4:6859586-6859605 | Msa0487730:CDS | 40.0% | |
AATCCACTCGTAATTCGCAT+TGG | - | chr3_4:6859658-6859677 | None:intergenic | 40.0% | |
GTGGATTCTGTAGATTTGCA+AGG | + | chr3_4:6859671-6859690 | Msa0487730:CDS | 40.0% | |
ACAACTTTGAGCTGATCAAG+AGG | + | chr3_4:6859722-6859741 | Msa0487730:CDS | 40.0% | |
! | GTAACTTGTAACACAGCAAC+AGG | - | chr3_4:6859751-6859770 | None:intergenic | 40.0% |
CTCATCAGTTATACTATGGG+AGG | - | chr3_4:6860188-6860207 | None:intergenic | 40.0% | |
TCCCTTCATATTCGAAAGAC+AGG | - | chr3_4:6860427-6860446 | None:intergenic | 40.0% | |
CACCACAGTACTATGCTTAT+AGG | - | chr3_4:6860642-6860661 | None:intergenic | 40.0% | |
GTGAAGCTCCAAAATTGCAA+TGG | + | chr3_4:6860821-6860840 | Msa0487730:intron | 40.0% | |
CTATTGCCATTGGAAGACAA+TGG | - | chr3_4:6861122-6861141 | None:intergenic | 40.0% | |
CAAGTGCATTCTATTGCCAT+TGG | - | chr3_4:6861132-6861151 | None:intergenic | 40.0% | |
TCCAACAAAGACATCCACTT+TGG | - | chr3_4:6861161-6861180 | None:intergenic | 40.0% | |
TTATGGGATTGGAAGTTGCA+AGG | - | chr3_4:6861184-6861203 | None:intergenic | 40.0% | |
!! | TTAAAGGTTGATGCCAGCTT+TGG | - | chr3_4:6861306-6861325 | None:intergenic | 40.0% |
! | TGATGTTTTCCACCTAGATG+TGG | + | chr3_4:6861357-6861376 | Msa0487730:intron | 40.0% |
!! | AACCCCACTTTTATCACAAG+TGG | - | chr3_4:6861456-6861475 | None:intergenic | 40.0% |
!!! | TTCTCTTTTGGTAGTGATCG+GGG | + | chr3_4:6861805-6861824 | Msa0487730:intron | 40.0% |
TGCTTCCTTGAACTCATCTT+TGG | + | chr3_4:6862277-6862296 | Msa0487730:intron | 40.0% | |
TGGTACCAAAGATGAGTTCA+AGG | - | chr3_4:6862285-6862304 | None:intergenic | 40.0% | |
CTCATCTTTGGTACCAAATC+TGG | + | chr3_4:6862289-6862308 | Msa0487730:intron | 40.0% | |
!! | TGCCATTGCTTTTGTGAATC+TGG | + | chr3_4:6862991-6863010 | Msa0487730:intron | 40.0% |
!! | TAGGACCGAATTTTAGAGGA+GGG | - | chr3_4:6863690-6863709 | None:intergenic | 40.0% |
!! | ATAGGACCGAATTTTAGAGG+AGG | - | chr3_4:6863691-6863710 | None:intergenic | 40.0% |
GCTACAATTACTGTTCCTGA+TGG | + | chr3_4:6863792-6863811 | Msa0487730:CDS | 40.0% | |
! | CCCCTTCATATTTGAAACAC+AGG | - | chr3_4:6863920-6863939 | None:intergenic | 40.0% |
TAGTCGTAGAAAAAGGTCCA+AGG | + | chr3_4:6864040-6864059 | Msa0487730:CDS | 40.0% | |
ACTCTCACTTGTTTCAACCT+TGG | - | chr3_4:6864060-6864079 | None:intergenic | 40.0% | |
! | ACATGCTTCTGAAAGAGCAA+AGG | + | chr3_4:6864109-6864128 | Msa0487730:CDS | 40.0% |
! | ACTGCTCTCCTTGAGAATTT+TGG | - | chr3_4:6864337-6864356 | None:intergenic | 40.0% |
AAAATTCTCAAGGAGAGCAG+TGG | + | chr3_4:6864336-6864355 | Msa0487730:intron | 40.0% | |
AAATTCTCAAGGAGAGCAGT+GGG | + | chr3_4:6864337-6864356 | Msa0487730:intron | 40.0% | |
TGAGCTGATCAATAAGAAGC+CGG | + | chr3_4:6864475-6864494 | Msa0487730:intron | 40.0% | |
CATTCATCATCAAAGTGGAG+AGG | - | chr3_4:6864564-6864583 | None:intergenic | 40.0% | |
GGATCACACCAACTAGTAAT+AGG | + | chr3_4:6864633-6864652 | Msa0487730:intron | 40.0% | |
CACAAGTGCCTATTACTAGT+TGG | - | chr3_4:6864644-6864663 | None:intergenic | 40.0% | |
CAATTTCTCAAGCTTCTCGT+AGG | - | chr3_4:6864731-6864750 | None:intergenic | 40.0% | |
CGAGAAGCTTGAGAAATTGT+TGG | + | chr3_4:6864732-6864751 | Msa0487730:intron | 40.0% | |
!! | GAGAAATTGTTGGACTAGCT+AGG | + | chr3_4:6864742-6864761 | Msa0487730:intron | 40.0% |
GACCTACAATCCCATAAGAT+AGG | + | chr3_4:6865020-6865039 | Msa0487730:intron | 40.0% | |
CCTACAATCCCATAAGATAG+GGG | + | chr3_4:6865022-6865041 | Msa0487730:intron | 40.0% | |
TTTGTGCTCCCCTATCTTAT+GGG | - | chr3_4:6865033-6865052 | None:intergenic | 40.0% | |
! | TTTTGTGCTCCCCTATCTTA+TGG | - | chr3_4:6865034-6865053 | None:intergenic | 40.0% |
! | AGATAGGGGAGCACAAAATT+TGG | + | chr3_4:6865036-6865055 | Msa0487730:intron | 40.0% |
AGCACAAAATTTGGCCTGAT+TGG | + | chr3_4:6865045-6865064 | Msa0487730:intron | 40.0% | |
ACAACCTATGTATGCCAATC+AGG | - | chr3_4:6865062-6865081 | None:intergenic | 40.0% | |
TCTAAATGGAATGGCTGAGT+TGG | + | chr3_4:6865167-6865186 | Msa0487730:intron | 40.0% | |
TCAACATGCTTGAGCAGAAA+TGG | + | chr3_4:6865420-6865439 | Msa0487730:intron | 40.0% | |
ATGCTTGAGCAGAAATGGAT+AGG | + | chr3_4:6865425-6865444 | Msa0487730:intron | 40.0% | |
CAGAAATGGATAGGTGAATC+AGG | + | chr3_4:6865434-6865453 | Msa0487730:intron | 40.0% | |
! | GCATGGTGATGAAAAGAGTT+TGG | + | chr3_4:6865677-6865696 | Msa0487730:intron | 40.0% |
!! | TGACTCTGATGTATTGGTTC+AGG | - | chr3_4:6866370-6866389 | None:intergenic | 40.0% |
AAACCGATCTATCCCAAGAA+AGG | + | chr3_4:6866415-6866434 | Msa0487730:intron | 40.0% | |
AACCGATCTATCCCAAGAAA+GGG | + | chr3_4:6866416-6866435 | Msa0487730:intron | 40.0% | |
TTCCCTTTCTTGGGATAGAT+CGG | - | chr3_4:6866421-6866440 | None:intergenic | 40.0% | |
CTTAGGACATTCCCTTTCTT+GGG | - | chr3_4:6866430-6866449 | None:intergenic | 40.0% | |
TCTTTAACACCTCGTTCCTT+AGG | - | chr3_4:6866447-6866466 | None:intergenic | 40.0% | |
!!! | ATTTTAACTCAGCCGGAATG+AGG | - | chr3_4:6866653-6866672 | None:intergenic | 40.0% |
CCGGCTGAGTTAAAATTAGA+AGG | + | chr3_4:6866657-6866676 | Msa0487730:intron | 40.0% | |
AAGAAACAATGAAGACTCGC+CGG | + | chr3_4:6867483-6867502 | Msa0487730:intron | 40.0% | |
! | TCTTTTGTATGATCTGGAGG+GGG | - | chr3_4:6867572-6867591 | None:intergenic | 40.0% |
! | CTCTTTTGTATGATCTGGAG+GGG | - | chr3_4:6867573-6867592 | None:intergenic | 40.0% |
ATATCCCAATCACAACCATC+GGG | - | chr3_4:6868100-6868119 | None:intergenic | 40.0% | |
CTTATCCATTCCAAACTTGG+AGG | + | chr3_4:6868278-6868297 | Msa0487730:CDS | 40.0% | |
TTAGTCCTCCAAGTTTGGAA+TGG | - | chr3_4:6868286-6868305 | None:intergenic | 40.0% | |
TTCCAAACTTGGAGGACTAA+TGG | + | chr3_4:6868286-6868305 | Msa0487730:CDS | 40.0% | |
CTCTGCTTCCAAAAGATCAA+AGG | + | chr3_4:6868333-6868352 | Msa0487730:CDS | 40.0% | |
GTAAAATCCTCACTGCATAG+TGG | - | chr3_4:6868411-6868430 | None:intergenic | 40.0% | |
AGGAACATACTACACAATGG+AGG | - | chr3_4:6859533-6859552 | None:intergenic | 40.0% | |
TGCTCCTTAGCAAATTCACT+AGG | - | chr3_4:6868520-6868539 | None:intergenic | 40.0% | |
TGAAGCATGAACGGAACATT+TGG | - | chr3_4:6868550-6868569 | None:intergenic | 40.0% | |
CCATTAGTTATTCGCATTGC+TGG | - | chr3_4:6868628-6868647 | None:intergenic | 40.0% | |
CCAGCAATGCGAATAACTAA+TGG | + | chr3_4:6868625-6868644 | Msa0487730:CDS | 40.0% | |
! | GTAACTTGTAACACCACAAC+AGG | - | chr3_4:6868724-6868743 | None:intergenic | 40.0% |
ACAAGTTACAACGTTTCGCA+CGG | + | chr3_4:6868735-6868754 | Msa0487730:CDS | 40.0% | |
GCTACCATCAATGAGCAATA+TGG | + | chr3_4:6868886-6868905 | Msa0487730:intron | 40.0% | |
TGGTCCATATTGCTCATTGA+TGG | - | chr3_4:6859884-6859903 | None:intergenic | 40.0% | |
! | TTTTATTCACTGGCACTGCA+TGG | - | chr3_4:6868936-6868955 | None:intergenic | 40.0% |
AAAACACACTCTCGCACTTA+GGG | - | chr3_4:6868999-6869018 | None:intergenic | 40.0% | |
! | GTTACAGTTACTGTTCTGGA+TGG | + | chr3_4:6869356-6869375 | Msa0487730:CDS | 40.0% |
!! | CTGTTCTGGATGGTCTTATT+TGG | + | chr3_4:6869366-6869385 | Msa0487730:CDS | 40.0% |
TCCCTTCGTATTTGAAAGAC+AGG | - | chr3_4:6869484-6869503 | None:intergenic | 40.0% | |
ACTCTCACTTGTTTCAACCT+TGG | - | chr3_4:6864060-6864079 | None:intergenic | 40.0% | |
GTTGAAACAAGTGAGAGTCA+AGG | + | chr3_4:6864062-6864081 | Msa0487730:CDS | 40.0% | |
!!! | GTTTTTCGGGTTGAATGCAT+TGG | - | chr3_4:6869705-6869724 | None:intergenic | 40.0% |
ATCAGCAATGCAAATAACGC+AGG | + | chr3_4:6869990-6870009 | Msa0487730:CDS | 40.0% | |
TCAGCAATGCAAATAACGCA+GGG | + | chr3_4:6869991-6870010 | Msa0487730:CDS | 40.0% | |
AGGCAGAACAATCTGTCATA+TGG | + | chr3_4:6870030-6870049 | Msa0487730:CDS | 40.0% | |
! | ATCGTGACTTTTAGCACAAC+TGG | - | chr3_4:6870090-6870109 | None:intergenic | 40.0% |
GGTTTAGGAATTGTTGGACT+AGG | + | chr3_4:6870281-6870300 | Msa0487730:three_prime_UTR | 40.0% | |
! | TGGATGCTTTTGTGCTCTTT+TGG | + | chr3_4:6870350-6870369 | Msa0487730:three_prime_UTR | 40.0% |
ATGATCTGGAGGAGGAAGTA+TGG | - | chr3_4:6857967-6857986 | None:intergenic | 45.0% | |
! | GGTTGATTGAGCCTGTGTTT+TGG | + | chr3_4:6858277-6858296 | Msa0487730:intron | 45.0% |
!! | GAGCCTGTGTTTTGGATTCA+TGG | + | chr3_4:6858285-6858304 | Msa0487730:intron | 45.0% |
GCTACCATTACTATTCCCGA+TGG | + | chr3_4:6859112-6859131 | Msa0487730:CDS | 45.0% | |
ACGACCATCGGGAATAGTAA+TGG | - | chr3_4:6859119-6859138 | None:intergenic | 45.0% | |
GTGCTCGGACACTTTATGTT+TGG | - | chr3_4:6859346-6859365 | None:intergenic | 45.0% | |
!! | GATCTTTTGGAAGCAGTGCT+CGG | - | chr3_4:6859361-6859380 | None:intergenic | 45.0% |
! | GGCAGCATCCTTTGATCTTT+TGG | - | chr3_4:6859374-6859393 | None:intergenic | 45.0% |
AGATCAAAGGATGCTGCCAA+TGG | + | chr3_4:6859376-6859395 | Msa0487730:CDS | 45.0% | |
TTTCGTTCCAAAGCCTTTGG+CGG | + | chr3_4:6859421-6859440 | Msa0487730:CDS | 45.0% | |
TGCTCCTTAGCAAATTCACC+AGG | - | chr3_4:6859553-6859572 | None:intergenic | 45.0% | |
!! | TAAGGAGCATCTGAAGCCAA+AGG | + | chr3_4:6859564-6859583 | Msa0487730:CDS | 45.0% |
ACACCAATGCGAATTACGAG+TGG | + | chr3_4:6859652-6859671 | Msa0487730:CDS | 45.0% | |
TATTGAATTGCAGGCGGAGA+AGG | + | chr3_4:6860076-6860095 | Msa0487730:intron | 45.0% | |
TGTTTGTCATGAATGGGCGA+GGG | - | chr3_4:6860140-6860159 | None:intergenic | 45.0% | |
TTGTTTGTCATGAATGGGCG+AGG | - | chr3_4:6860141-6860160 | None:intergenic | 45.0% | |
CAGTTATACTATGGGAGGGA+GGG | - | chr3_4:6860183-6860202 | None:intergenic | 45.0% | |
TCAGTTATACTATGGGAGGG+AGG | - | chr3_4:6860184-6860203 | None:intergenic | 45.0% | |
GCTACAGTTACTGTACCTGA+TGG | + | chr3_4:6860299-6860318 | Msa0487730:CDS | 45.0% | |
! | CTGTACCTGATGGTCTTACT+TGG | + | chr3_4:6860309-6860328 | Msa0487730:CDS | 45.0% |
! | AAACAAACACGGAGTGTCCA+AGG | + | chr3_4:6860528-6860547 | Msa0487730:CDS | 45.0% |
TGCTGATGATTCACCAAGTG+AGG | + | chr3_4:6860583-6860602 | Msa0487730:CDS | 45.0% | |
GATTCACCAAGTGAGGATCA+AGG | + | chr3_4:6860590-6860609 | Msa0487730:CDS | 45.0% | |
TCTGTTCCTTGATCCTCACT+TGG | - | chr3_4:6860599-6860618 | None:intergenic | 45.0% | |
AGCGAGGACGCATCAATTTA+AGG | - | chr3_4:6860742-6860761 | None:intergenic | 45.0% | |
TGTACACGTTTAGGTCGTTC+AGG | + | chr3_4:6860863-6860882 | Msa0487730:intron | 45.0% | |
CGACGAAGTTGTAACACAAC+TGG | - | chr3_4:6860980-6860999 | None:intergenic | 45.0% | |
TGCACTTGTGTTTGCCAAAG+TGG | + | chr3_4:6861144-6861163 | Msa0487730:intron | 45.0% | |
GCCAAAGTGGATGTCTTTGT+TGG | + | chr3_4:6861157-6861176 | Msa0487730:intron | 45.0% | |
GCTGCCTTCATAATCACTGA+TGG | + | chr3_4:6861260-6861279 | Msa0487730:intron | 45.0% | |
TGAGCTGTTGTACCACATCT+AGG | - | chr3_4:6861372-6861391 | None:intergenic | 45.0% | |
ATGAATGGGTGAGGGAAGTA+TGG | - | chr3_4:6862771-6862790 | None:intergenic | 45.0% | |
ATACTTCCCTCACCCATTCA+TGG | + | chr3_4:6862770-6862789 | Msa0487730:CDS | 45.0% | |
GCACACACAAAAGAGTCACA+AGG | - | chr3_4:6863025-6863044 | None:intergenic | 45.0% | |
!! | GTCAGCCCTCCTCTAAAATT+CGG | + | chr3_4:6863682-6863701 | Msa0487730:intron | 45.0% |
TGTTCCTGATGGTCGTGATT+GGG | + | chr3_4:6863803-6863822 | Msa0487730:CDS | 45.0% | |
ATTTCCCAATCACGACCATC+AGG | - | chr3_4:6863810-6863829 | None:intergenic | 45.0% | |
TGATGGTCGTGATTGGGAAA+TGG | + | chr3_4:6863809-6863828 | Msa0487730:CDS | 45.0% | |
CCCCTATCTTATGGGATTGT+AGG | - | chr3_4:6865025-6865044 | None:intergenic | 45.0% | |
TTGGCCTGATTGGCATACAT+AGG | + | chr3_4:6865055-6865074 | Msa0487730:intron | 45.0% | |
GTTTAGTGGAAGAGTGAGCA+TGG | + | chr3_4:6865084-6865103 | Msa0487730:intron | 45.0% | |
TATTGTGAGGGTTCAATGGC+TGG | + | chr3_4:6865655-6865674 | Msa0487730:intron | 45.0% | |
CCTTAGGACATTCCCTTTCT+TGG | - | chr3_4:6866431-6866450 | None:intergenic | 45.0% | |
CCAAGAAAGGGAATGTCCTA+AGG | + | chr3_4:6866428-6866447 | Msa0487730:intron | 45.0% | |
AGTCGTTGTTTGGCCAAGAA+TGG | - | chr3_4:6866505-6866524 | None:intergenic | 45.0% | |
!!! | GGCTTTGGAGGTACCTTTTT+GGG | + | chr3_4:6866620-6866639 | Msa0487730:intron | 45.0% |
TACCTCATCCCCCCAAAATT+TGG | + | chr3_4:6866803-6866822 | Msa0487730:intron | 45.0% | |
TTTGAATCTTTCTCCGGCTC+CGG | - | chr3_4:6867527-6867546 | None:intergenic | 45.0% | |
AGATGAGTTCCTATCACTGC+AGG | + | chr3_4:6868009-6868028 | Msa0487730:intron | 45.0% | |
GATGAGTTCCTATCACTGCA+GGG | + | chr3_4:6868010-6868029 | Msa0487730:intron | 45.0% | |
GCTACAATTACTGTTCCCGA+TGG | + | chr3_4:6868082-6868101 | Msa0487730:CDS | 45.0% | |
TGTTCCCGATGGTTGTGATT+GGG | + | chr3_4:6868093-6868112 | Msa0487730:CDS | 45.0% | |
CTCCATTAGTCCTCCAAGTT+TGG | - | chr3_4:6868291-6868310 | None:intergenic | 45.0% | |
GAGCTCGGACACTTTATGTT+TGG | - | chr3_4:6868316-6868335 | None:intergenic | 45.0% | |
!! | GATCTTTTGGAAGCAGAGCT+CGG | - | chr3_4:6868331-6868350 | None:intergenic | 45.0% |
!! | GTGGGAAGTTTCTGGTGTAT+TGG | + | chr3_4:6868588-6868607 | Msa0487730:CDS | 45.0% |
TCTGGTGTATTGGATAGACC+AGG | + | chr3_4:6868598-6868617 | Msa0487730:CDS | 45.0% | |
!!! | ATTCGCATTGCTGGTTTTCC+TGG | - | chr3_4:6868619-6868638 | None:intergenic | 45.0% |
GAAAACACACTCTCGCACTT+AGG | - | chr3_4:6869000-6869019 | None:intergenic | 45.0% | |
! | TATGTGGTGTGACTTGTGAG+TGG | - | chr3_4:6869042-6869061 | None:intergenic | 45.0% |
TATTGAATTGCAGGCGGAGA+AGG | + | chr3_4:6860076-6860095 | Msa0487730:intron | 45.0% | |
TCTTTGTCATGAATGGGCGA+GGG | - | chr3_4:6869196-6869215 | None:intergenic | 45.0% | |
TTCTTTGTCATGAATGGGCG+AGG | - | chr3_4:6869197-6869216 | None:intergenic | 45.0% | |
! | AACAATGAGTGTTCTAGGCC+TGG | + | chr3_4:6869590-6869609 | Msa0487730:CDS | 45.0% |
! | ACAATGAGTGTTCTAGGCCT+GGG | + | chr3_4:6869591-6869610 | Msa0487730:CDS | 45.0% |
AGGAACATACTGCACAATGG+AGG | - | chr3_4:6869842-6869861 | None:intergenic | 45.0% | |
!! | GGCTTTATGCGTTGATGATC+TGG | - | chr3_4:6869965-6869984 | None:intergenic | 45.0% |
TTGTGTGTTTGAGCTGATCC+AGG | + | chr3_4:6870059-6870078 | Msa0487730:CDS | 45.0% | |
ACATGTAGCAGGCAACATCA+TGG | - | chr3_4:6870175-6870194 | None:intergenic | 45.0% | |
ATGATGTTGCCTGCTACATG+TGG | + | chr3_4:6870174-6870193 | Msa0487730:three_prime_UTR | 45.0% | |
!!! | AAAAATATAATTAATCTTTT+TGG | + | chr3_4:6858651-6858670 | Msa0487730:intron | 5.0% |
!!! | ATTATATAGTATTTTATTTA+TGG | - | chr3_4:6862557-6862576 | None:intergenic | 5.0% |
!! | TATTAATTAATTAATGTATT+TGG | - | chr3_4:6867070-6867089 | None:intergenic | 5.0% |
GCGACGGAACATATCTTCTC+CGG | - | chr3_4:6857908-6857927 | None:intergenic | 50.0% | |
GAGAAGATATGTTCCGTCGC+CGG | + | chr3_4:6857908-6857927 | Msa0487730:CDS | 50.0% | |
TTGGAATCTTTCTCCGGCTC+CGG | - | chr3_4:6857930-6857949 | None:intergenic | 50.0% | |
TATTCCCGATGGTCGTGAGT+GGG | + | chr3_4:6859123-6859142 | Msa0487730:CDS | 50.0% | |
ATATCCCACTCACGACCATC+GGG | - | chr3_4:6859130-6859149 | None:intergenic | 50.0% | |
CATATCCCACTCACGACCAT+CGG | - | chr3_4:6859131-6859150 | None:intergenic | 50.0% | |
TCTTACTGCACATCCGCCAA+AGG | - | chr3_4:6859437-6859456 | None:intergenic | 50.0% | |
ACAAGTTACTGCGTCTCGCA+CGG | + | chr3_4:6859762-6859781 | Msa0487730:CDS | 50.0% | |
TATGTGGCGTGACGTGTGAA+CGG | - | chr3_4:6859986-6860005 | None:intergenic | 50.0% | |
ATGAATGGGCGAGGGAAGTA+TGG | - | chr3_4:6860132-6860151 | None:intergenic | 50.0% | |
GGAATTGAAGAAACGTGGGG+AGG | + | chr3_4:6860337-6860356 | Msa0487730:CDS | 50.0% | |
AGTGTCCAAGGCCTAGGAAA+AGG | + | chr3_4:6860540-6860559 | Msa0487730:CDS | 50.0% | |
AAGGCCTAGGAAAAGGTCCA+GGG | + | chr3_4:6860547-6860566 | Msa0487730:CDS | 50.0% | |
! | TCAACCCTGGACCTTTTCCT+AGG | - | chr3_4:6860554-6860573 | None:intergenic | 50.0% |
ATATACTGCACAAGGGAGCG+AGG | - | chr3_4:6860758-6860777 | None:intergenic | 50.0% | |
GCTGTTGTACCACATCTAGG+TGG | - | chr3_4:6861369-6861388 | None:intergenic | 50.0% | |
TGGGTGTTAGGAGCCAGATT+TGG | - | chr3_4:6862305-6862324 | None:intergenic | 50.0% | |
AACAAACAATGCAGGCTCGC+CGG | + | chr3_4:6862690-6862709 | Msa0487730:intron | 50.0% | |
TGAGTGCCATGAATGGGTGA+GGG | - | chr3_4:6862779-6862798 | None:intergenic | 50.0% | |
TTGAGTGCCATGAATGGGTG+AGG | - | chr3_4:6862780-6862799 | None:intergenic | 50.0% | |
CTGTTCCTGATGGTCGTGAT+TGG | + | chr3_4:6863802-6863821 | Msa0487730:CDS | 50.0% | |
AGGGGCAACAATCTGTCTCA+TGG | + | chr3_4:6864437-6864456 | Msa0487730:intron | 50.0% | |
! | CTTGATGGCAGTGGCATTGA+TGG | - | chr3_4:6865239-6865258 | None:intergenic | 50.0% |
CCAGGTGGAGAACAGAAAGT+TGG | - | chr3_4:6865527-6865546 | None:intergenic | 50.0% | |
CCAACTTTCTGTTCTCCACC+TGG | + | chr3_4:6865524-6865543 | Msa0487730:intron | 50.0% | |
TTCTGTTCTCCACCTGGATG+TGG | + | chr3_4:6865530-6865549 | Msa0487730:intron | 50.0% | |
GTTGTACCTGTTCCACATCC+AGG | - | chr3_4:6865545-6865564 | None:intergenic | 50.0% | |
AGGGAATGTCCTAAGGAACG+AGG | + | chr3_4:6866435-6866454 | Msa0487730:intron | 50.0% | |
TGTATCTGTCAAGGCGGCTT+TGG | + | chr3_4:6866605-6866624 | Msa0487730:intron | 50.0% | |
!!! | CGGCTTTGGAGGTACCTTTT+TGG | + | chr3_4:6866619-6866638 | Msa0487730:intron | 50.0% |
ATGAGGACTCGTGCCCAAAA+AGG | - | chr3_4:6866636-6866655 | None:intergenic | 50.0% | |
AGTCTTCCATCTCAAGCCAC+TGG | + | chr3_4:6866748-6866767 | Msa0487730:intron | 50.0% | |
TGAGGTAGAAGAGGAGATGG+AGG | - | chr3_4:6866790-6866809 | None:intergenic | 50.0% | |
GGATGAGGTAGAAGAGGAGA+TGG | - | chr3_4:6866793-6866812 | None:intergenic | 50.0% | |
!! | GTCCAAATTTTGGGGGGATG+AGG | - | chr3_4:6866808-6866827 | None:intergenic | 50.0% |
CTGGAATTCCCTGCAGTGAT+AGG | - | chr3_4:6868021-6868040 | None:intergenic | 50.0% | |
CTGTTCCCGATGGTTGTGAT+TGG | + | chr3_4:6868092-6868111 | Msa0487730:CDS | 50.0% | |
AATCCTCACTGCATAGTGGC+TGG | - | chr3_4:6868407-6868426 | None:intergenic | 50.0% | |
GGAAAGCAGTGGGAAGTTTC+TGG | + | chr3_4:6859607-6859626 | Msa0487730:CDS | 50.0% | |
GATCAAGAGGAAGCCTGTTG+TGG | + | chr3_4:6859735-6859754 | Msa0487730:CDS | 50.0% | |
ATGAATGGGCGAGGGAAGTA+TGG | - | chr3_4:6860132-6860151 | None:intergenic | 50.0% | |
GGACTTGAAGAAATGTGGCG+AGG | + | chr3_4:6869394-6869413 | Msa0487730:CDS | 50.0% | |
! | AGTGTTCTAGGCCTGGGAAA+AGG | + | chr3_4:6869597-6869616 | Msa0487730:CDS | 50.0% |
! | TCAACCTTGGACCTTTTCCC+AGG | - | chr3_4:6869611-6869630 | None:intergenic | 50.0% |
AATCACCACGGGAAGACATG+CGG | + | chr3_4:6869742-6869761 | Msa0487730:CDS | 50.0% | |
TTAGCACAACTGGACTCTCC+TGG | - | chr3_4:6870080-6870099 | None:intergenic | 50.0% | |
CTATTCCCGATGGTCGTGAG+TGG | + | chr3_4:6859122-6859141 | Msa0487730:CDS | 55.0% | |
CGATGGTCGTGAGTGGGATA+TGG | + | chr3_4:6859129-6859148 | Msa0487730:CDS | 55.0% | |
TGCACATCCGCCAAAGGCTT+TGG | - | chr3_4:6859431-6859450 | None:intergenic | 55.0% | |
GAATTGCAGGCGGAGAAGGA+AGG | + | chr3_4:6860080-6860099 | Msa0487730:intron | 55.0% | |
! | CTGGACCTTTTCCTAGGCCT+TGG | - | chr3_4:6860548-6860567 | None:intergenic | 55.0% |
CAAGGCCTAGGAAAAGGTCC+AGG | + | chr3_4:6860546-6860565 | Msa0487730:CDS | 55.0% | |
AGGTCGTTCAGGACTGCGAT+TGG | + | chr3_4:6860874-6860893 | Msa0487730:intron | 55.0% | |
GGTCGTTCAGGACTGCGATT+GGG | + | chr3_4:6860875-6860894 | Msa0487730:intron | 55.0% | |
GTCGTTCAGGACTGCGATTG+GGG | + | chr3_4:6860876-6860895 | Msa0487730:intron | 55.0% | |
TCAGGACTGCGATTGGGGAA+AGG | + | chr3_4:6860881-6860900 | Msa0487730:intron | 55.0% | |
TTGAAATCTCTCTCCGCCGC+CGG | - | chr3_4:6862734-6862753 | None:intergenic | 55.0% | |
TCTCCACCTGGATGTGGAAC+AGG | + | chr3_4:6865536-6865555 | Msa0487730:intron | 55.0% | |
GTACCTGTTCCACATCCAGG+TGG | - | chr3_4:6865542-6865561 | None:intergenic | 55.0% | |
TGAGGGTTCAATGGCTGGCA+TGG | + | chr3_4:6865660-6865679 | Msa0487730:intron | 55.0% | |
! | ATCTGTCAAGGCGGCTTTGG+AGG | + | chr3_4:6866608-6866627 | Msa0487730:intron | 55.0% |
TTGGGCACGAGTCCTCATTC+CGG | + | chr3_4:6866638-6866657 | Msa0487730:intron | 55.0% | |
CCATGACCAGTGGCTTGAGA+TGG | - | chr3_4:6866757-6866776 | None:intergenic | 55.0% | |
CCATCTCAAGCCACTGGTCA+TGG | + | chr3_4:6866754-6866773 | Msa0487730:intron | 55.0% | |
ACACTCTCAGCCATGACCAG+TGG | - | chr3_4:6866767-6866786 | None:intergenic | 55.0% | |
TTGGGGGGATGAGGTAGAAG+AGG | - | chr3_4:6866799-6866818 | None:intergenic | 55.0% | |
GCGACGGAACACATCTTCTC+CGG | - | chr3_4:6867505-6867524 | None:intergenic | 55.0% | |
GAGAAGATGTGTTCCGTCGC+CGG | + | chr3_4:6867505-6867524 | Msa0487730:CDS | 55.0% | |
!! | CACTGCATAGTGGCTGGCTT+TGG | - | chr3_4:6868401-6868420 | None:intergenic | 55.0% |
AAGCCAGCCACTATGCAGTG+AGG | + | chr3_4:6868401-6868420 | Msa0487730:intron | 55.0% | |
! | GGTGTGACTTGTGAGTGGTC+CGG | - | chr3_4:6869037-6869056 | None:intergenic | 55.0% |
TGCAGGCGGAGAAGGAAGTT+AGG | + | chr3_4:6869140-6869159 | Msa0487730:intron | 55.0% | |
GCAGGCGGAGAAGGAAGTTA+GGG | + | chr3_4:6869141-6869160 | Msa0487730:intron | 55.0% | |
TAGGCCTGGGAAAAGGTCCA+AGG | + | chr3_4:6869604-6869623 | Msa0487730:CDS | 55.0% | |
ATATGTTCCGTCGCCGGAGC+CGG | + | chr3_4:6857914-6857933 | Msa0487730:CDS | 60.0% | |
TGCAGGCGGAGAAGGAAGGT+AGG | + | chr3_4:6860084-6860103 | Msa0487730:intron | 60.0% | |
GCAGGCGGAGAAGGAAGGTA+GGG | + | chr3_4:6860085-6860104 | Msa0487730:intron | 60.0% | |
! | ACACGGAGTGTCCAAGGCCT+AGG | + | chr3_4:6860534-6860553 | Msa0487730:CDS | 60.0% |
GTGGCAGGACAGAGCTTCTC+CGG | - | chr3_4:6862712-6862731 | None:intergenic | 60.0% | |
GAGAAGCTCTGTCCTGCCAC+CGG | + | chr3_4:6862712-6862731 | Msa0487730:CDS | 60.0% | |
TCTCACCGCATGTCTTCCCG+TGG | - | chr3_4:6869750-6869769 | None:intergenic | 60.0% | |
TCTTTCTCCGGCTCCGGCGA+CGG | - | chr3_4:6857924-6857943 | None:intergenic | 65.0% | |
AAGCTCTGTCCTGCCACCGG+CGG | + | chr3_4:6862715-6862734 | Msa0487730:CDS | 65.0% | |
AAATCTCTCTCCGCCGCCGG+TGG | - | chr3_4:6862731-6862750 | None:intergenic | 65.0% | |
ATGTGTTCCGTCGCCGGAGC+CGG | + | chr3_4:6867511-6867530 | Msa0487730:CDS | 65.0% | |
TCTTTCTCCGGCTCCGGCGA+CGG | - | chr3_4:6857924-6857943 | None:intergenic | 65.0% | |
CTCTGTCCTGCCACCGGCGG+CGG | + | chr3_4:6862718-6862737 | Msa0487730:CDS | 75.0% | |
! | CTCTCTCCGCCGCCGGTGGC+AGG | - | chr3_4:6862727-6862746 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 6857894 | 6870420 | 6857894 | ID=Msa0487730;Name=Msa0487730 |
chr3_4 | mRNA | 6857894 | 6870420 | 6857894 | ID=Msa0487730-mRNA-1;Parent=Msa0487730;Name=Msa0487730-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.47|0.27|1|0.58|0.33|18|283|1080 |
chr3_4 | exon | 6857894 | 6857998 | 6857894 | ID=Msa0487730-mRNA-1:exon:2356;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6859061 | 6859229 | 6859061 | ID=Msa0487730-mRNA-1:exon:2357;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6859242 | 6859450 | 6859242 | ID=Msa0487730-mRNA-1:exon:2358;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6859544 | 6859783 | 6859544 | ID=Msa0487730-mRNA-1:exon:2359;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6860089 | 6860163 | 6860089 | ID=Msa0487730-mRNA-1:exon:2360;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6860248 | 6860475 | 6860248 | ID=Msa0487730-mRNA-1:exon:2361;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6860491 | 6860658 | 6860491 | ID=Msa0487730-mRNA-1:exon:2362;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6862704 | 6862802 | 6862704 | ID=Msa0487730-mRNA-1:exon:2363;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6863741 | 6863968 | 6863741 | ID=Msa0487730-mRNA-1:exon:2364;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6863984 | 6864199 | 6863984 | ID=Msa0487730-mRNA-1:exon:2365;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6867497 | 6867595 | 6867497 | ID=Msa0487730-mRNA-1:exon:2366;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6868031 | 6868199 | 6868031 | ID=Msa0487730-mRNA-1:exon:2367;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6868212 | 6868417 | 6868212 | ID=Msa0487730-mRNA-1:exon:2368;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6868511 | 6868756 | 6868511 | ID=Msa0487730-mRNA-1:exon:2369;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6869145 | 6869219 | 6869145 | ID=Msa0487730-mRNA-1:exon:2370;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6869305 | 6869483 | 6869305 | ID=Msa0487730-mRNA-1:exon:2371;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6869517 | 6869763 | 6869517 | ID=Msa0487730-mRNA-1:exon:2372;Parent=Msa0487730-mRNA-1 |
chr3_4 | exon | 6869853 | 6870420 | 6869853 | ID=Msa0487730-mRNA-1:exon:2373;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6857894 | 6857998 | 6857894 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6859061 | 6859229 | 6859061 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6859242 | 6859450 | 6859242 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6859544 | 6859783 | 6859544 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6860089 | 6860163 | 6860089 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6860248 | 6860475 | 6860248 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6860491 | 6860658 | 6860491 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6862704 | 6862802 | 6862704 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6863741 | 6863968 | 6863741 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6863984 | 6864199 | 6863984 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6867497 | 6867595 | 6867497 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6868031 | 6868199 | 6868031 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6868212 | 6868417 | 6868212 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6868511 | 6868756 | 6868511 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6869145 | 6869219 | 6869145 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6869305 | 6869483 | 6869305 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6869517 | 6869763 | 6869517 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | CDS | 6869853 | 6870137 | 6869853 | ID=Msa0487730-mRNA-1:cds;Parent=Msa0487730-mRNA-1 |
chr3_4 | three_prime_UTR | 6870138 | 6870420 | 6870138 | ID=Msa0487730-mRNA-1:three_prime_utr;Parent=Msa0487730-mRNA-1 |
Gene Sequence |
Protein sequence |