AlfalfaGEDB | Msa0487740

M. sativa cultivar zhongmu-4 / Msa0487740

KEGG: K14328
GO: GO:0000184 GO:0000956 GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010605 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0023052 GO:0031974 GO:0031981 GO:0032870 GO:0034641 GO:0034655 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046677 GO:0046700 GO:0048519 GO:0048571 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901700 GO:1901701
PFAM: PF02362.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0487740	XP_003598025.2	77.247	523	116	2	1	522	20	540	0.0	821

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0487740	sp\|Q8L3W1\|VRN1_ARATH	28.060	335	158	7	271	522	6	340	6.44e-30	123
Msa0487740	sp\|Q8L3W1\|VRN1_ARATH	38.384	99	61	0	23	121	6	104	1.08e-17	87.8

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0487740	G7IYE4	77.247	523	116	2	1	522	20	540	0.0	821

TFs/TRs:

Gene ID	Type	Classification
Msa0487740	TF	B3

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0487740	MtrunA17_Chr4g0009491	83.032	442	55	1	37	478	11	432	0.0	748
Msa0487740	MtrunA17_Chr4g0009491	53.171	205	74	1	18	200	220	424	1.71e-65	219
Msa0487740	MtrunA17_Chr4g0009491	52.113	213	80	1	285	497	11	201	4.84e-64	215
Msa0487740	MtrunA17_Chr3g0077361	71.128	523	113	3	1	522	20	505	0.0	740
Msa0487740	MtrunA17_Chr3g0077381	80.361	443	57	3	37	478	34	447	0.0	707
Msa0487740	MtrunA17_Chr3g0077381	49.590	244	77	4	285	526	34	233	5.30e-61	207
Msa0487740	MtrunA17_Chr3g0077381	51.707	205	70	2	18	200	242	439	2.63e-59	202
Msa0487740	MtrunA17_Chr3g0077411	63.346	532	174	5	1	522	1	521	0.0	644
Msa0487740	MtrunA17_Chr3g0077461	57.796	481	166	8	38	516	22	467	0.0	520
Msa0487740	MtrunA17_Chr3g0077461	49.167	240	110	5	18	248	232	468	2.07e-61	209
Msa0487740	MtrunA17_Chr3g0077451	65.833	240	71	2	285	523	10	239	2.46e-108	323
Msa0487740	MtrunA17_Chr3g0077451	57.078	219	81	2	37	242	10	228	1.97e-74	236
Msa0487740	MtrunA17_Chr5g0429931	65.401	237	82	0	286	522	10	246	1.10e-104	313
Msa0487740	MtrunA17_Chr5g0429931	56.388	227	77	1	38	242	10	236	2.55e-77	243
Msa0487740	MtrunA17_Chr3g0077431	63.810	210	65	2	315	523	1	200	3.23e-89	272
Msa0487740	MtrunA17_Chr3g0077431	53.968	189	74	2	67	242	1	189	9.30e-57	188
Msa0487740	MtrunA17_Chr3g0077421	62.381	210	67	2	315	522	1	200	1.08e-85	263
Msa0487740	MtrunA17_Chr3g0077421	53.684	190	74	2	67	242	1	190	3.23e-54	181
Msa0487740	MtrunA17_Chr3g0077441	62.381	210	67	2	315	522	1	200	1.08e-85	263
Msa0487740	MtrunA17_Chr3g0077441	53.684	190	74	2	67	242	1	190	3.23e-54	181
Msa0487740	MtrunA17_Chr3g0131891	29.897	291	163	6	270	521	18	306	1.45e-29	119
Msa0487740	MtrunA17_Chr3g0131891	27.240	279	144	7	16	235	12	290	5.57e-20	91.3
Msa0487740	MtrunA17_Chr8g0390841	29.630	297	156	9	271	518	39	331	1.01e-27	116
Msa0487740	MtrunA17_Chr8g0390841	32.323	99	67	0	23	121	39	137	6.79e-14	74.3
Msa0487740	MtrunA17_Chr7g0233561	28.296	311	174	7	263	524	8	318	1.11e-27	113
Msa0487740	MtrunA17_Chr7g0233561	24.855	346	198	10	22	359	17	308	2.26e-18	86.3
Msa0487740	MtrunA17_Chr1g0162441	47.475	99	52	0	271	369	7	105	1.69e-27	114
Msa0487740	MtrunA17_Chr1g0162441	40.404	99	59	0	23	121	7	105	3.58e-21	96.3
Msa0487740	MtrunA17_Chr3g0103181	30.108	279	154	8	270	517	11	279	1.31e-26	109
Msa0487740	MtrunA17_Chr3g0103181	27.881	269	139	8	22	241	11	273	2.50e-20	91.3
Msa0487740	MtrunA17_Chr3g0103171	28.731	268	148	6	286	517	5	265	1.85e-25	105
Msa0487740	MtrunA17_Chr3g0103171	26.953	256	134	6	38	241	5	259	9.45e-19	86.3
Msa0487740	MtrunA17_Chr1g0208771	28.620	297	147	11	286	527	12	298	4.58e-24	105
Msa0487740	MtrunA17_Chr1g0208771	33.333	84	56	0	38	121	12	95	4.70e-12	68.2
Msa0487740	MtrunA17_Chr1g0208771	26.592	267	170	10	271	519	201	459	4.53e-11	65.1
Msa0487740	MtrunA17_Chr7g0233521	29.434	265	157	4	287	521	2	266	6.39e-24	101
Msa0487740	MtrunA17_Chr7g0233521	34.884	86	56	0	39	124	2	87	2.01e-15	76.6
Msa0487740	MtrunA17_Chr4g0033961	43.137	102	58	0	268	369	3	104	2.63e-23	102
Msa0487740	MtrunA17_Chr4g0033961	34.513	113	65	1	9	121	1	104	4.03e-16	80.9
Msa0487740	MtrunA17_Chr7g0233531	27.737	274	150	7	287	521	2	266	4.38e-23	99.4
Msa0487740	MtrunA17_Chr7g0233531	23.600	250	137	7	39	235	2	250	9.99e-15	74.7
Msa0487740	MtrunA17_Chr1g0162411	41.748	103	60	0	271	373	7	109	1.07e-21	97.8
Msa0487740	MtrunA17_Chr1g0162411	33.613	119	68	1	23	141	7	114	2.27e-15	78.6
Msa0487740	MtrunA17_Chr1g0163071	28.571	294	140	8	287	518	2	287	1.14e-21	95.9
Msa0487740	MtrunA17_Chr1g0163071	37.647	85	53	0	39	123	2	86	4.73e-14	73.2
Msa0487740	MtrunA17_Chr5g0419201	35.514	107	69	0	263	369	8	114	5.78e-21	90.9
Msa0487740	MtrunA17_Chr5g0419201	35.354	99	64	0	23	121	16	114	1.04e-17	81.6
Msa0487740	MtrunA17_Chr7g0233541	27.931	290	146	10	287	521	2	283	6.30e-21	93.2
Msa0487740	MtrunA17_Chr7g0233541	31.250	112	72	1	39	145	2	113	1.37e-15	77.4
Msa0487740	MtrunA17_Chr4g0067431	28.669	293	156	8	270	511	14	304	3.25e-20	91.7
Msa0487740	MtrunA17_Chr1g0154131	27.338	278	153	8	282	514	193	466	3.74e-20	93.6
Msa0487740	MtrunA17_Chr7g0233571	35.200	125	81	0	270	394	9	133	9.52e-20	88.2
Msa0487740	MtrunA17_Chr7g0233571	34.653	101	66	0	22	122	9	109	7.40e-17	79.7
Msa0487740	MtrunA17_Chr3g0103151	37.692	130	68	2	270	399	11	127	3.72e-19	84.7
Msa0487740	MtrunA17_Chr3g0103151	37.000	100	61	1	22	121	11	108	3.18e-15	73.6
Msa0487740	MtrunA17_Chr5g0421921	39.640	111	66	1	412	522	3	112	4.10e-19	83.2
Msa0487740	MtrunA17_Chr5g0421731	39.640	111	66	1	412	522	3	112	4.10e-19	83.2
Msa0487740	MtrunA17_Chr1g0163221	27.018	285	167	10	270	517	10	290	4.81e-19	89.0
Msa0487740	MtrunA17_Chr1g0163221	23.129	294	156	9	15	246	3	288	2.07e-11	65.5
Msa0487740	MtrunA17_Chr5g0421851	36.306	157	80	4	385	522	32	187	6.28e-19	84.7
Msa0487740	MtrunA17_Chr1g0154161	24.555	281	176	7	270	517	29	306	3.76e-18	85.5
Msa0487740	MtrunA17_Chr1g0162421	46.774	62	33	0	281	342	3	64	2.10e-17	76.6
Msa0487740	MtrunA17_Chr1g0163131	24.579	297	164	9	270	515	17	304	3.77e-16	79.3
Msa0487740	MtrunA17_Chr1g0163251	26.471	272	166	9	280	520	14	282	4.49e-16	80.1
Msa0487740	MtrunA17_Chr3g0103191	41.414	99	56	1	271	369	12	108	5.49e-16	77.8
Msa0487740	MtrunA17_Chr3g0103191	38.384	99	59	1	23	121	12	108	9.61e-15	74.3
Msa0487740	MtrunA17_Chr6g0467351	33.571	140	89	2	270	405	14	153	1.45e-15	76.3
Msa0487740	MtrunA17_Chr3g0103201	27.982	218	127	6	329	517	4	220	1.55e-14	73.2
Msa0487740	MtrunA17_Chr1g0163061	36.538	104	65	1	270	372	14	117	1.52e-13	71.2
Msa0487740	MtrunA17_Chr1g0163101	29.921	127	86	2	265	391	11	134	3.74e-13	68.2
Msa0487740	MtrunA17_Chr1g0154041	31.959	97	65	1	270	366	15	110	3.77e-12	68.9
Msa0487740	MtrunA17_Chr1g0154101	24.645	211	115	6	197	364	66	275	2.45e-11	66.6
Msa0487740	MtrunA17_Chr1g0171611	24.254	268	180	7	269	519	7	268	3.12e-11	64.3
Msa0487740	MtrunA17_Chr6g0476181	36.082	97	59	2	287	383	2	95	6.89e-11	60.8
Msa0487740	MtrunA17_Chr1g0154211	33.696	92	60	1	270	361	22	112	8.88e-11	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0487740	AT3G18990.1	28.060	335	158	7	271	522	6	340	6.55e-31	123
Msa0487740	AT3G18990.1	38.384	99	61	0	23	121	6	104	1.10e-18	87.8
Msa0487740	AT3G18990.2	28.144	334	157	7	271	521	6	339	2.15e-30	122
Msa0487740	AT3G18990.2	38.384	99	61	0	23	121	6	104	1.74e-18	87.8
Msa0487740	AT3G18960.2	37.879	132	79	1	240	371	2	130	2.55e-20	89.4
Msa0487740	AT3G18960.2	35.185	108	70	0	16	123	23	130	1.86e-16	78.2
Msa0487740	AT3G18960.1	37.037	135	82	1	240	374	2	133	3.84e-20	89.4
Msa0487740	AT3G18960.1	35.185	108	70	0	16	123	23	130	4.76e-16	77.4
Msa0487740	AT4G01580.1	35.556	135	84	1	240	374	2	133	4.19e-20	88.6
Msa0487740	AT4G01580.1	29.412	153	95	2	3	155	15	154	1.08e-17	81.6
Msa0487740	AT1G49475.1	42.342	111	63	1	269	379	32	141	1.20e-19	87.4
Msa0487740	AT1G49475.1	33.813	139	81	2	4	132	5	142	1.36e-16	78.6
Msa0487740	AT1G26680.5	21.858	549	345	20	22	516	14	532	6.84e-18	87.8
Msa0487740	AT1G26680.6	21.858	549	345	20	22	516	14	532	7.03e-18	87.8
Msa0487740	AT2G24645.1	22.309	511	347	19	20	513	3	480	1.03e-15	80.1
Msa0487740	AT2G24645.3	21.556	450	312	13	78	513	66	488	2.57e-15	79.0
Msa0487740	AT2G24645.4	21.930	456	303	15	78	513	44	466	3.97e-15	78.2
Msa0487740	AT3G18960.3	39.560	91	55	0	284	374	6	96	4.96e-15	73.6
Msa0487740	AT3G18960.3	35.227	88	57	0	36	123	6	93	2.33e-12	65.9
Msa0487740	AT1G26680.4	21.072	541	348	19	22	511	14	526	5.40e-15	79.0
Msa0487740	AT1G26680.1	21.072	541	348	19	22	511	14	526	6.84e-15	78.6
Msa0487740	AT1G26680.3	20.833	552	358	22	22	516	14	543	9.79e-14	74.7
Msa0487740	AT1G26680.2	21.138	492	319	19	78	516	55	530	1.49e-12	70.9
Msa0487740	AT1G49480.3	36.607	112	62	3	142	248	113	220	3.42e-11	63.5
Msa0487740	AT1G49480.3	35.714	112	62	4	417	522	118	225	4.44e-11	63.5
Msa0487740	AT1G49480.1	36.607	112	62	3	142	248	113	220	3.42e-11	63.5
Msa0487740	AT1G49480.1	35.714	112	62	4	417	522	118	225	4.44e-11	63.5
Msa0487740	AT1G49480.2	36.607	112	62	3	142	248	113	220	3.42e-11	63.5
Msa0487740	AT1G49480.2	35.714	112	62	4	417	522	118	225	4.44e-11	63.5
Msa0487740	AT4G31640.1	23.904	251	154	9	267	506	10	234	5.24e-11	64.7

Find 85 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATGCTTTCCTTGAGAATTT+TGG	0.134641	3_4:+6877067	None:intergenic
GGCAGCACAATTCACTCTTT+TGG	0.221967	3_4:+6878594	None:intergenic
ACTGCTTTCCTTGAGAGTTT+TGG	0.223060	3_4:+6878358	None:intergenic
GATGAGTTTATAACAAGATT+TGG	0.242784	3_4:-6877662	Msa0487740:CDS
TTGTTGTCCTTTACAAATTT+CGG	0.251174	3_4:+6876982	None:intergenic
GATGAGTTTATAAATAGATT+TGG	0.270080	3_4:-6878895	Msa0487740:CDS
AAATACTATTCGTTAGGATA+TGG	0.294914	3_4:-6877524	Msa0487740:CDS
TACTATCTCTTTGTCTTGAA+TGG	0.298245	3_4:+6877955	None:intergenic
TATGGCTTTCATAAAATGTT+TGG	0.299040	3_4:+6879715	None:intergenic
TTCAAAACTCCAAGTACTAA+TGG	0.347246	3_4:-6878649	Msa0487740:CDS
CTTTGATCTCCATTAGTACT+TGG	0.349576	3_4:+6878640	None:intergenic
ATTTGCATTGAGAATGATTT+GGG	0.350230	3_4:+6877018	None:intergenic
ATGAGTTTATAAATAGATTT+GGG	0.360502	3_4:-6878894	Msa0487740:CDS
ATGAGTTTATAACAAGATTT+GGG	0.367534	3_4:-6877661	Msa0487740:CDS
TGGAGTGCGATTGGAACATT+TGG	0.367737	3_4:+6877087	None:intergenic
TTGAATGGGCGAGGGAAGTA+TGG	0.375377	3_4:+6877970	None:intergenic
CTACTCCTATGAAAAGTTCC+AGG	0.375640	3_4:-6877373	Msa0487740:CDS
TATTTGCATTGAGAATGATT+TGG	0.397480	3_4:+6877017	None:intergenic
AATCTATTTATAAACTCATC+TGG	0.412994	3_4:+6878898	None:intergenic
AATCTTGTTATAAACTCATC+TGG	0.413404	3_4:+6877665	None:intergenic
ATGATCTGGAGGAGGAAGTA+TGG	0.415345	3_4:+6879697	None:intergenic
GCGACGGAACACATCTTTGC+CGG	0.419956	3_4:+6879762	None:intergenic
ATTCTGTAGTACGTTCCTTC+TGG	0.420347	3_4:-6878423	Msa0487740:intron
TTTGCAAAATACTATTCGTT+AGG	0.426106	3_4:-6877530	Msa0487740:CDS
ACTATCTCTTTGTCTTGAAT+GGG	0.432252	3_4:+6877956	None:intergenic
CTCTTTGTCTTGAATGGGCG+AGG	0.444494	3_4:+6877961	None:intergenic
AAGGGAAAACAATCTATTAG+AGG	0.448831	3_4:-6878262	Msa0487740:CDS
TGATGGTCGTGAATGGGAAA+TGG	0.450553	3_4:-6878836	Msa0487740:CDS
AATGGAGATCAAAGCATAAA+GGG	0.451246	3_4:-6878631	Msa0487740:CDS
TTCTCAATGCAAATAACAAT+GGG	0.452154	3_4:-6877009	Msa0487740:CDS
TAATGGAGATCAAAGCATAA+AGG	0.452714	3_4:-6878632	Msa0487740:CDS
TTGGAATCTTTCTCCGGTGC+CGG	0.453652	3_4:+6879734	None:intergenic
CTGTTCCTGATGGTCGTGAT+TGG	0.457555	3_4:-6877610	Msa0487740:CDS
AAATGTTTGGAATCTTTCTC+CGG	0.458549	3_4:+6879728	None:intergenic
TATTGTATTTCGAATACAAA+AGG	0.459107	3_4:-6878327	Msa0487740:CDS
ATGTTTCGTGCGGTTGACTA+CGG	0.465735	3_4:-6876892	Msa0487740:CDS
CAATGACAGAAAATGAAGTA+AGG	0.469914	3_4:-6878015	Msa0487740:CDS
TCTTTCTCCGGTGCCGGTGA+CGG	0.473264	3_4:+6879740	None:intergenic
GGGATTTCCGAAATTTGTAA+AGG	0.476832	3_4:-6876989	Msa0487740:CDS
ATTTCCCATTCACGACCATC+AGG	0.482051	3_4:+6878838	None:intergenic
CTGTGTGTTTGTTTCTCCAT+TGG	0.483276	3_4:+6877400	None:intergenic
AAAATTCTCAAGGAAAGCAT+TGG	0.485732	3_4:-6877065	Msa0487740:CDS
TCCGTCGCCGTCACCGGCAC+CGG	0.490647	3_4:-6879747	Msa0487740:CDS
GCAACTTGTAGCACAACAAC+AGG	0.493988	3_4:+6878204	None:intergenic
ACTGTTGCCAATTGTTGCTA+AGG	0.496870	3_4:+6878785	None:intergenic
GAATACTATTCCATCAGTTA+CGG	0.500398	3_4:-6878757	Msa0487740:CDS
TTGTTCCTGATGGTCGTGAA+TGG	0.506528	3_4:-6878843	Msa0487740:CDS
ATGTGTTCCGTCGCCGTCAC+CGG	0.509296	3_4:-6879753	Msa0487740:CDS
GCTATCATTATTGTTCCTGA+TGG	0.512138	3_4:-6878853	Msa0487740:CDS
ATTCTCAATGCAAATAACAA+TGG	0.514820	3_4:-6877010	Msa0487740:CDS
CTCAAAACTCTAAGTACCAA+TGG	0.522769	3_4:-6877416	Msa0487740:CDS
ACTGCCACTTGTTTCAACCC+TGG	0.525622	3_4:+6877355	None:intergenic
TCCGGTGCCGGTGACGGCGA+CGG	0.526161	3_4:+6879746	None:intergenic
TGAGTTGATCAAGGAGAAGC+CGG	0.526203	3_4:-6876932	Msa0487740:CDS
TTGTGTGTTTGAGTTGATCA+AGG	0.529271	3_4:-6876941	Msa0487740:CDS
GATGGTCGTGAATGGGAAAT+GGG	0.538439	3_4:-6878835	Msa0487740:CDS
GTGGATTCAGTAAATTTGCA+AGG	0.539955	3_4:-6878281	Msa0487740:CDS
TATTATATTTGATGTAACTT+CGG	0.545296	3_4:-6877456	Msa0487740:CDS
TGTTCCTGATGGTCGTGAAT+GGG	0.546552	3_4:-6878842	Msa0487740:CDS
TTTCATTCAAAATCCGTCAA+GGG	0.556507	3_4:-6878544	Msa0487740:CDS
AATGACAGAAAATGAAGTAA+GGG	0.563753	3_4:-6878014	Msa0487740:CDS
TACATATCTTTCAAATACGA+AGG	0.575333	3_4:-6877497	Msa0487740:CDS
TTCATGCTCCAAAACTCTCA+AGG	0.581396	3_4:-6878366	Msa0487740:CDS
AGGGAAAACAATCTATTAGA+GGG	0.584707	3_4:-6878261	Msa0487740:CDS
TGGATTCAGTAAATTTGCAA+GGG	0.590777	3_4:-6878280	Msa0487740:CDS
AAAACTCTCAAGGAAAGCAG+TGG	0.591204	3_4:-6878356	Msa0487740:CDS
CAATGCAGCCTCCATGCGGA+AGG	0.592466	3_4:-6878048	Msa0487740:intron
AATTGCTAAGCGAAATCTTG+TGG	0.593067	3_4:-6877234	Msa0487740:intron
GACTGGGCACACCTTCCGCA+TGG	0.593609	3_4:+6878037	None:intergenic
ATGTGTTTGAGCTGATCAAG+AGG	0.597303	3_4:-6878230	Msa0487740:CDS
TCTTTGTCTTGAATGGGCGA+GGG	0.598003	3_4:+6877962	None:intergenic
ATCGCACTCCAAAATTCTCA+AGG	0.598710	3_4:-6877075	Msa0487740:CDS
ACAAGTTGCAGCAATTTGCA+CGG	0.599452	3_4:-6878190	Msa0487740:intron
TACTCCTATGAAAAGTTCCA+GGG	0.613948	3_4:-6877372	Msa0487740:CDS
AAGAAACAATGAAGACTCAC+CGG	0.615286	3_4:-6879781	None:intergenic
GCTACAGTTACTGTTCCTGA+TGG	0.628443	3_4:-6877620	Msa0487740:CDS
AGTTCCAGGGTTGAAACAAG+TGG	0.632824	3_4:-6877359	Msa0487740:CDS
TCATCAATGCGAATAACGAG+TGG	0.633101	3_4:-6878300	Msa0487740:CDS
AAACTCTCAAGGAAAGCAGT+GGG	0.637619	3_4:-6878355	Msa0487740:CDS
CATTCATCATCACAGTAGAG+AGG	0.649717	3_4:+6876864	None:intergenic
AAAAGTCACAATGTTTCGTG+CGG	0.653466	3_4:-6876902	Msa0487740:CDS
AAGGACAACAATCTGACACA+TGG	0.654644	3_4:-6876970	Msa0487740:CDS
TGGGCACACCTTCCGCATGG+AGG	0.664596	3_4:+6878040	None:intergenic
GAAATGGGACTGACGAAATG+TGG	0.673053	3_4:-6878820	Msa0487740:CDS
ATTGCAATGCAGCCTCCATG+CGG	0.701402	3_4:-6878052	Msa0487740:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTTTTATTCTTATCAT+CGG	+	chr3_4:6878784-6878803	None:intergenic	10.0%
!!	ATTAATTATTAGTGTATGTT+TGG	-	chr3_4:6877178-6877197	Msa0487740:intron	15.0%
!!	CACAAATTATTTACAAATTT+GGG	+	chr3_4:6877554-6877573	None:intergenic	15.0%
!!	ACACAAATTATTTACAAATT+TGG	+	chr3_4:6877555-6877574	None:intergenic	15.0%
!!	ATGAGTTTATAAATAGATTT+GGG	-	chr3_4:6877752-6877771	Msa0487740:intron	15.0%
!!!	TTTTTTTTATTCTTATCATC+GGG	+	chr3_4:6878783-6878802	None:intergenic	15.0%
!!	TATTATATTTGATGTAACTT+CGG	-	chr3_4:6879190-6879209	Msa0487740:intron	15.0%
!!!	CAATTTTTGAACAAAAATAA+GGG	+	chr3_4:6879397-6879416	None:intergenic	15.0%
!!!	CATTTTATAAACCTACAAAT+TGG	-	chr3_4:6877310-6877329	Msa0487740:CDS	20.0%
!!!	ATGTTTGAACTAATTTTTGT+GGG	+	chr3_4:6877596-6877615	None:intergenic	20.0%
!!	AATCTATTTATAAACTCATC+TGG	+	chr3_4:6877751-6877770	None:intergenic	20.0%
!!	GATGAGTTTATAAATAGATT+TGG	-	chr3_4:6877751-6877770	Msa0487740:intron	20.0%
!!!	TTTTTAGATTTCAAGTATGA+AGG	-	chr3_4:6877916-6877935	Msa0487740:intron	20.0%
!!!	TTTTAGATTTCAAGTATGAA+GGG	-	chr3_4:6877917-6877936	Msa0487740:intron	20.0%
!!!	AATGAAAATAAGGGTTTTTT+GGG	+	chr3_4:6878089-6878108	None:intergenic	20.0%
!!!	ATGTTTGAGTTATATACTTA+CGG	-	chr3_4:6878175-6878194	Msa0487740:intron	20.0%
!!!	TAAAAAGTATTTGATGCTAA+TGG	-	chr3_4:6878252-6878271	Msa0487740:CDS	20.0%
!!	TATTGTATTTCGAATACAAA+AGG	-	chr3_4:6878319-6878338	Msa0487740:CDS	20.0%
!!!	TTTTTTTATTCTTATCATCG+GGG	+	chr3_4:6878782-6878801	None:intergenic	20.0%
!!	ATGAGTTTATAACAAGATTT+GGG	-	chr3_4:6878985-6879004	Msa0487740:intron	20.0%
!!!	GCAATTTTTGAACAAAAATA+AGG	+	chr3_4:6879398-6879417	None:intergenic	20.0%
!!!	GAATTTTACTTTGTAGTTTT+TGG	-	chr3_4:6879438-6879457	Msa0487740:intron	20.0%
!	TATGGCTTTCATAAAATGTT+TGG	+	chr3_4:6876934-6876953	None:intergenic	25.0%
!!!	ACTATTTCTTTTGTATGATC+TGG	+	chr3_4:6876966-6876985	None:intergenic	25.0%
!!	AATGCTCATACTACTTATTT+TGG	-	chr3_4:6877063-6877082	Msa0487740:CDS	25.0%
!!	CATGTTTGAACTAATTTTTG+TGG	+	chr3_4:6877597-6877616	None:intergenic	25.0%
!	ATCAATCAAACTTCAAAAGA+GGG	+	chr3_4:6877684-6877703	None:intergenic	25.0%
!!	TTCATCAGTTTTACTACTAT+AGG	+	chr3_4:6877707-6877726	None:intergenic	25.0%
!!!	GAATGAAAATAAGGGTTTTT+TGG	+	chr3_4:6878090-6878109	None:intergenic	25.0%
!!	CGGATTTTGAATGAAAATAA+GGG	+	chr3_4:6878098-6878117	None:intergenic	25.0%
!!	ACGGATTTTGAATGAAAATA+AGG	+	chr3_4:6878099-6878118	None:intergenic	25.0%
!!!	GATTTCACTTTCTAGTTTTT+TGG	-	chr3_4:6878140-6878159	Msa0487740:intron	25.0%
!	AATGACAGAAAATGAAGTAA+GGG	-	chr3_4:6878632-6878651	Msa0487740:CDS	25.0%
!	ACTACTTCAAAACATCAAAT+TGG	-	chr3_4:6878878-6878897	Msa0487740:CDS	25.0%
!	CTACTTCAAAACATCAAATT+GGG	-	chr3_4:6878879-6878898	Msa0487740:CDS	25.0%
!	TACTTCAAAACATCAAATTG+GGG	-	chr3_4:6878880-6878899	Msa0487740:CDS	25.0%
!	CTATAATACCAAACTTCAAA+AGG	+	chr3_4:6878927-6878946	None:intergenic	25.0%
!	GGTATTATAGTATAACCAAT+AGG	-	chr3_4:6878937-6878956	Msa0487740:intron	25.0%
!!	AATCTTGTTATAAACTCATC+TGG	+	chr3_4:6878984-6879003	None:intergenic	25.0%
!	GATGAGTTTATAACAAGATT+TGG	-	chr3_4:6878984-6879003	Msa0487740:intron	25.0%
!!	AATGACATTTTCTTTTGCAA+CGG	-	chr3_4:6879083-6879102	Msa0487740:intron	25.0%
!	TTTGCAAAATACTATTCGTT+AGG	-	chr3_4:6879116-6879135	Msa0487740:intron	25.0%
!	AAATACTATTCGTTAGGATA+TGG	-	chr3_4:6879122-6879141	Msa0487740:intron	25.0%
!	TACATATCTTTCAAATACGA+AGG	-	chr3_4:6879149-6879168	Msa0487740:intron	25.0%
!	AAAAAGCTCAAAATCAAGTT+TGG	-	chr3_4:6879320-6879339	Msa0487740:intron	25.0%
!!!	GTTTTTTGGATTGAATTCAT+TGG	+	chr3_4:6879375-6879394	None:intergenic	25.0%
!!!	GAACAAAAATAAGGGTTTTT+TGG	+	chr3_4:6879389-6879408	None:intergenic	25.0%
!	ATTTGCATTGAGAATGATTT+GGG	+	chr3_4:6879631-6879650	None:intergenic	25.0%
!	TATTTGCATTGAGAATGATT+TGG	+	chr3_4:6879632-6879651	None:intergenic	25.0%
!	ATTCTCAATGCAAATAACAA+TGG	-	chr3_4:6879636-6879655	Msa0487740:intron	25.0%
!	TTCTCAATGCAAATAACAAT+GGG	-	chr3_4:6879637-6879656	Msa0487740:intron	25.0%
!	TTGTTGTCCTTTACAAATTT+CGG	+	chr3_4:6879667-6879686	None:intergenic	25.0%
!	AAATGTTTGGAATCTTTCTC+CGG	+	chr3_4:6876921-6876940	None:intergenic	30.0%
!	ATTTCTTTTGTATGATCTGG+AGG	+	chr3_4:6876963-6876982	None:intergenic	30.0%
!!	TGTCATGTGTTTTGGATTAA+TGG	-	chr3_4:6877249-6877268	Msa0487740:CDS	30.0%
	TTAGGATATATTCTTCGAGT+CGG	-	chr3_4:6877485-6877504	Msa0487740:CDS	30.0%
!	ACAGGTTTAGGATATATTCT+AGG	-	chr3_4:6877512-6877531	Msa0487740:CDS	30.0%
!	CAGGTTTAGGATATATTCTA+GGG	-	chr3_4:6877513-6877532	Msa0487740:CDS	30.0%
!	TTTGAACTAATTTTTGTGGG+AGG	+	chr3_4:6877593-6877612	None:intergenic	30.0%
	TCAATCAAACTTCAAAAGAG+GGG	+	chr3_4:6877683-6877702	None:intergenic	30.0%
	GATCAATCAAACTTCAAAAG+AGG	+	chr3_4:6877685-6877704	None:intergenic	30.0%
	GAATACTATTCCATCAGTTA+CGG	-	chr3_4:6877889-6877908	Msa0487740:intron	30.0%
	TAAAAAACAACCGTAACTGA+TGG	+	chr3_4:6877902-6877921	None:intergenic	30.0%
!!!	TTAGTACTTGGAGTTTTGAA+TGG	+	chr3_4:6877997-6878016	None:intergenic	30.0%
	TTCAAAACTCCAAGTACTAA+TGG	-	chr3_4:6877997-6878016	Msa0487740:CDS	30.0%
	TAATGGAGATCAAAGCATAA+AGG	-	chr3_4:6878014-6878033	Msa0487740:CDS	30.0%
	AATGGAGATCAAAGCATAAA+GGG	-	chr3_4:6878015-6878034	Msa0487740:CDS	30.0%
!	TTTTCATTCAAAATCCGTCA+AGG	-	chr3_4:6878101-6878120	Msa0487740:intron	30.0%
	TTTCATTCAAAATCCGTCAA+GGG	-	chr3_4:6878102-6878121	Msa0487740:intron	30.0%
!!	TACTTTTTAGCAAAACCAGA+AGG	+	chr3_4:6878241-6878260	None:intergenic	30.0%
	TGGATTCAGTAAATTTGCAA+GGG	-	chr3_4:6878366-6878385	Msa0487740:CDS	30.0%
	AAGGGAAAACAATCTATTAG+AGG	-	chr3_4:6878384-6878403	Msa0487740:CDS	30.0%
	AGGGAAAACAATCTATTAGA+GGG	-	chr3_4:6878385-6878404	Msa0487740:CDS	30.0%
!	TCTTTTAATGTCTGAACTGT+TGG	-	chr3_4:6878535-6878554	Msa0487740:CDS	30.0%
!!	TTCATTTTCTGTCATTGACT+GGG	+	chr3_4:6878628-6878647	None:intergenic	30.0%
	CAATGACAGAAAATGAAGTA+AGG	-	chr3_4:6878631-6878650	Msa0487740:CDS	30.0%
!!	GGAATCGAAACATTTTAAGA+AGG	-	chr3_4:6878653-6878672	Msa0487740:CDS	30.0%
	ACTATCTCTTTGTCTTGAAT+GGG	+	chr3_4:6878693-6878712	None:intergenic	30.0%
	TACTATCTCTTTGTCTTGAA+TGG	+	chr3_4:6878694-6878713	None:intergenic	30.0%
	ACAGTAACTCAAAACAGAAA+GGG	+	chr3_4:6878722-6878741	None:intergenic	30.0%
	AACAGTAACTCAAAACAGAA+AGG	+	chr3_4:6878723-6878742	None:intergenic	30.0%
	CTAGACACCTAAATTTGATT+TGG	+	chr3_4:6878836-6878855	None:intergenic	30.0%
	AATACCAAACTTCAAAAGGA+GGG	+	chr3_4:6878923-6878942	None:intergenic	30.0%
	TAATACCAAACTTCAAAAGG+AGG	+	chr3_4:6878924-6878943	None:intergenic	30.0%
!	AATGCTTTCCTTGAGAATTT+TGG	+	chr3_4:6879582-6879601	None:intergenic	30.0%
!	AAAATTCTCAAGGAAAGCAT+TGG	-	chr3_4:6879581-6879600	Msa0487740:intron	30.0%
!!	ACTCTAACTCTGAAACTTTG+AGG	-	chr3_4:6877033-6877052	Msa0487740:CDS	35.0%
!	TGAGTATGTGTCATGTGTTT+TGG	-	chr3_4:6877241-6877260	Msa0487740:CDS	35.0%
	ATGCAAAAAACTTCGAGTCA+GGG	-	chr3_4:6877455-6877474	Msa0487740:CDS	35.0%
	TAGGATATATTCTTCGAGTC+GGG	-	chr3_4:6877486-6877505	Msa0487740:CDS	35.0%
	GCTATCATTATTGTTCCTGA+TGG	-	chr3_4:6877793-6877812	Msa0487740:intron	35.0%
!	ACGTTTTCCTTAGCAACAAT+TGG	-	chr3_4:6877854-6877873	Msa0487740:intron	35.0%
	CTTTGATCTCCATTAGTACT+TGG	+	chr3_4:6878009-6878028	None:intergenic	35.0%
!!!	GTTTTTTGGGTTGAATTCAC+TGG	+	chr3_4:6878076-6878095	None:intergenic	35.0%
	GTGGATTCAGTAAATTTGCA+AGG	-	chr3_4:6878365-6878384	Msa0487740:CDS	35.0%
!	TGAACTGTTGGTGAACTTAA+TGG	-	chr3_4:6878547-6878566	Msa0487740:CDS	35.0%
!	CTTCATTTTCTGTCATTGAC+TGG	+	chr3_4:6878629-6878648	None:intergenic	35.0%
	GACGTGTCCAAATCAAATTT+AGG	-	chr3_4:6878826-6878845	Msa0487740:CDS	35.0%
!	ACATTTTCTTTTGCAACGGA+TGG	-	chr3_4:6879087-6879106	Msa0487740:intron	35.0%
!!!	TTGGTACTTAGAGTTTTGAG+TGG	+	chr3_4:6879230-6879249	None:intergenic	35.0%
	CTCAAAACTCTAAGTACCAA+TGG	-	chr3_4:6879230-6879249	Msa0487740:intron	35.0%
	TACTCCTATGAAAAGTTCCA+GGG	-	chr3_4:6879274-6879293	Msa0487740:intron	35.0%
!!	ACATGCTTTTAAAAGTGCAG+AGG	-	chr3_4:6879343-6879362	Msa0487740:intron	35.0%
	AATTGCTAAGCGAAATCTTG+TGG	-	chr3_4:6879412-6879431	Msa0487740:intron	35.0%
	GGGATTTCCGAAATTTGTAA+AGG	-	chr3_4:6879657-6879676	Msa0487740:intron	35.0%
!!	TTGTGTGTTTGAGTTGATCA+AGG	-	chr3_4:6879705-6879724	Msa0487740:CDS	35.0%
!	ATTGTGACTTTTAGCACAAC+CGG	+	chr3_4:6879736-6879755	None:intergenic	35.0%
	AAAAGTCACAATGTTTCGTG+CGG	-	chr3_4:6879744-6879763	Msa0487740:CDS	35.0%
!	TCTTTTGTATGATCTGGAGG+AGG	+	chr3_4:6876960-6876979	None:intergenic	40.0%
	TTGAGCCTACAGATCATGTT+TGG	-	chr3_4:6877432-6877451	Msa0487740:CDS	40.0%
	TGCATCCAAACATGATCTGT+AGG	+	chr3_4:6877440-6877459	None:intergenic	40.0%
	GATGCAAAAAACTTCGAGTC+AGG	-	chr3_4:6877454-6877473	Msa0487740:CDS	40.0%
	AGGATATATTCTTCGAGTCG+GGG	-	chr3_4:6877487-6877506	Msa0487740:CDS	40.0%
	ACTGTTGCCAATTGTTGCTA+AGG	+	chr3_4:6877864-6877883	None:intergenic	40.0%
!!!	ACTCTTTTGGGATCAGAGTT+AGG	+	chr3_4:6878042-6878061	None:intergenic	40.0%
!	GCAGCACAATTCACTCTTTT+GGG	+	chr3_4:6878054-6878073	None:intergenic	40.0%
	AGGAACGTACTACAGAATGA+AGG	+	chr3_4:6878221-6878240	None:intergenic	40.0%
	ATTCTGTAGTACGTTCCTTC+TGG	-	chr3_4:6878223-6878242	Msa0487740:CDS	40.0%
!!!	TGAGAGTTTTGGAGCATGAA+CGG	+	chr3_4:6878280-6878299	None:intergenic	40.0%
	TTCATGCTCCAAAACTCTCA+AGG	-	chr3_4:6878280-6878299	Msa0487740:CDS	40.0%
!	ACTGCTTTCCTTGAGAGTTT+TGG	+	chr3_4:6878291-6878310	None:intergenic	40.0%
	AAAACTCTCAAGGAAAGCAG+TGG	-	chr3_4:6878290-6878309	Msa0487740:CDS	40.0%
	AAACTCTCAAGGAAAGCAGT+GGG	-	chr3_4:6878291-6878310	Msa0487740:CDS	40.0%
	TCATCAATGCGAATAACGAG+TGG	-	chr3_4:6878346-6878365	Msa0487740:CDS	40.0%
	ATGTGTTTGAGCTGATCAAG+AGG	-	chr3_4:6878416-6878435	Msa0487740:CDS	40.0%
	ACAAGTTGCAGCAATTTGCA+CGG	-	chr3_4:6878456-6878475	Msa0487740:intron	40.0%
!!!	GTTACCCTCCTTTTGAAGTT+TGG	-	chr3_4:6878916-6878935	Msa0487740:intron	40.0%
!	ATTTTCCAATCACGACCATC+AGG	+	chr3_4:6879044-6879063	None:intergenic	40.0%
!	CTGTGTGTTTGTTTCTCCAT+TGG	+	chr3_4:6879249-6879268	None:intergenic	40.0%
!	CTGGAACTTTTCATAGGAGT+AGG	+	chr3_4:6879275-6879294	None:intergenic	40.0%
	CTACTCCTATGAAAAGTTCC+AGG	-	chr3_4:6879273-6879292	Msa0487740:intron	40.0%
!	TCAACCCTGGAACTTTTCAT+AGG	+	chr3_4:6879281-6879300	None:intergenic	40.0%
!!!	TGAGAATTTTGGAGTGCGAT+TGG	+	chr3_4:6879571-6879590	None:intergenic	40.0%
	ATCGCACTCCAAAATTCTCA+AGG	-	chr3_4:6879571-6879590	Msa0487740:intron	40.0%
	AAGGACAACAATCTGACACA+TGG	-	chr3_4:6879676-6879695	Msa0487740:intron	40.0%
	ATGATCTGGAGGAGGAAGTA+TGG	+	chr3_4:6876952-6876971	None:intergenic	45.0%
!!!	GTGGGAGGCAACATTGATTT+TGG	+	chr3_4:6877578-6877597	None:intergenic	45.0%
	TTGTTCCTGATGGTCGTGAA+TGG	-	chr3_4:6877803-6877822	Msa0487740:intron	45.0%
	TGTTCCTGATGGTCGTGAAT+GGG	-	chr3_4:6877804-6877823	Msa0487740:intron	45.0%
	ATTTCCCATTCACGACCATC+AGG	+	chr3_4:6877811-6877830	None:intergenic	45.0%
	TGATGGTCGTGAATGGGAAA+TGG	-	chr3_4:6877810-6877829	Msa0487740:intron	45.0%
	GATGGTCGTGAATGGGAAAT+GGG	-	chr3_4:6877811-6877830	Msa0487740:intron	45.0%
	GAAATGGGACTGACGAAATG+TGG	-	chr3_4:6877826-6877845	Msa0487740:intron	45.0%
!	GGCAGCACAATTCACTCTTT+TGG	+	chr3_4:6878055-6878074	None:intergenic	45.0%
!!!	ATCCGTCAAGGGCATTTTTG+CGG	-	chr3_4:6878113-6878132	Msa0487740:intron	45.0%
	CGTACTACAGAATGAAGGAG+AGG	+	chr3_4:6878216-6878235	None:intergenic	45.0%
	GCAACTTGTAGCACAACAAC+AGG	+	chr3_4:6878445-6878464	None:intergenic	45.0%
	TCTTTGTCTTGAATGGGCGA+GGG	+	chr3_4:6878687-6878706	None:intergenic	45.0%
	CTGCAGTGATAACAGCCTAT+TGG	+	chr3_4:6878955-6878974	None:intergenic	45.0%
	GCTACAGTTACTGTTCCTGA+TGG	-	chr3_4:6879026-6879045	Msa0487740:intron	45.0%
	AGTTCCAGGGTTGAAACAAG+TGG	-	chr3_4:6879287-6879306	Msa0487740:intron	45.0%
	TGGAGTGCGATTGGAACATT+TGG	+	chr3_4:6879562-6879581	None:intergenic	45.0%
!!	TGAGTTGATCAAGGAGAAGC+CGG	-	chr3_4:6879714-6879733	Msa0487740:CDS	45.0%
	ATGTTTCGTGCGGTTGACTA+CGG	-	chr3_4:6879754-6879773	Msa0487740:CDS	45.0%
!!	AAAAATAAATATAAAACAAT+AGG	+	chr3_4:6877110-6877129	None:intergenic	5.0%
	TTGGAATCTTTCTCCGGTGC+CGG	+	chr3_4:6876915-6876934	None:intergenic	50.0%
	TACAAATTGGAGCCTCTCCG+CGG	-	chr3_4:6877323-6877342	Msa0487740:CDS	50.0%
!	ATGTTGTGATGACGAGTCCG+CGG	+	chr3_4:6877343-6877362	None:intergenic	50.0%
	TCGAGTCAGGGCTACAAGTT+AGG	-	chr3_4:6877467-6877486	Msa0487740:CDS	50.0%
	CACCGCAAAAATGCCCTTGA+CGG	+	chr3_4:6878118-6878137	None:intergenic	50.0%
!!!	TCAAGGGCATTTTTGCGGTG+AGG	-	chr3_4:6878118-6878137	Msa0487740:intron	50.0%
	ATTGCAATGCAGCCTCCATG+CGG	-	chr3_4:6878594-6878613	Msa0487740:CDS	50.0%
	TTGAATGGGCGAGGGAAGTA+TGG	+	chr3_4:6878679-6878698	None:intergenic	50.0%
	CTCTTTGTCTTGAATGGGCG+AGG	+	chr3_4:6878688-6878707	None:intergenic	50.0%
	CTGTTCCTGATGGTCGTGAT+TGG	-	chr3_4:6879036-6879055	Msa0487740:intron	50.0%
!	ACTGCCACTTGTTTCAACCC+TGG	+	chr3_4:6879294-6879313	None:intergenic	50.0%
	GCGACGGAACACATCTTTGC+CGG	+	chr3_4:6876887-6876906	None:intergenic	55.0%
	GCGGAGAGGCTCCAATTTGT+AGG	+	chr3_4:6877324-6877343	None:intergenic	55.0%
	ATTCTTCGAGTCGGGGCAAC+AGG	-	chr3_4:6877494-6877513	Msa0487740:CDS	55.0%
	ATGTGTTCCGTCGCCGTCAC+CGG	-	chr3_4:6876893-6876912	Msa0487740:CDS	60.0%
!!	TCTTTCTCCGGTGCCGGTGA+CGG	+	chr3_4:6876909-6876928	None:intergenic	60.0%
	CGAGTCGGGGCAACAGGTTT+AGG	-	chr3_4:6877500-6877519	Msa0487740:CDS	60.0%
	CAATGCAGCCTCCATGCGGA+AGG	-	chr3_4:6878598-6878617	Msa0487740:CDS	60.0%
!	GTGATGACGAGTCCGCGGAG+AGG	+	chr3_4:6877338-6877357	None:intergenic	65.0%
	TGGGCACACCTTCCGCATGG+AGG	+	chr3_4:6878609-6878628	None:intergenic	65.0%
	GACTGGGCACACCTTCCGCA+TGG	+	chr3_4:6878612-6878631	None:intergenic	65.0%
	TCCGTCGCCGTCACCGGCAC+CGG	-	chr3_4:6876899-6876918	Msa0487740:CDS	75.0%
!!	TCCGGTGCCGGTGACGGCGA+CGG	+	chr3_4:6876903-6876922	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_4	gene	6876873	6879795	6876873	ID=Msa0487740;Name=Msa0487740
chr3_4	mRNA	6876873	6879795	6876873	ID=Msa0487740-mRNA-1;Parent=Msa0487740;Name=Msa0487740-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0\|0.4\|0.16\|1\|1\|1\|6\|0\|528
chr3_4	exon	6879685	6879795	6879685	ID=Msa0487740-mRNA-1:exon:2380;Parent=Msa0487740-mRNA-1
chr3_4	exon	6878534	6878926	6878534	ID=Msa0487740-mRNA-1:exon:2379;Parent=Msa0487740-mRNA-1
chr3_4	exon	6878191	6878436	6878191	ID=Msa0487740-mRNA-1:exon:2378;Parent=Msa0487740-mRNA-1
chr3_4	exon	6877958	6878062	6877958	ID=Msa0487740-mRNA-1:exon:2377;Parent=Msa0487740-mRNA-1
chr3_4	exon	6877235	6877693	6877235	ID=Msa0487740-mRNA-1:exon:2376;Parent=Msa0487740-mRNA-1
chr3_4	exon	6876873	6877145	6876873	ID=Msa0487740-mRNA-1:exon:2375;Parent=Msa0487740-mRNA-1
chr3_4	CDS	6879685	6879795	6879685	ID=Msa0487740-mRNA-1:cds;Parent=Msa0487740-mRNA-1
chr3_4	CDS	6878534	6878926	6878534	ID=Msa0487740-mRNA-1:cds;Parent=Msa0487740-mRNA-1
chr3_4	CDS	6878191	6878436	6878191	ID=Msa0487740-mRNA-1:cds;Parent=Msa0487740-mRNA-1
chr3_4	CDS	6877958	6878062	6877958	ID=Msa0487740-mRNA-1:cds;Parent=Msa0487740-mRNA-1
chr3_4	CDS	6877235	6877693	6877235	ID=Msa0487740-mRNA-1:cds;Parent=Msa0487740-mRNA-1
chr3_4	CDS	6876873	6877145	6876873	ID=Msa0487740-mRNA-1:cds;Parent=Msa0487740-mRNA-1

Gene Sequence

>Msa0487740

ATGAAGACTCACCGGCAAAGATGTGTTCCGTCGCCGTCACCGGCACCGGAGAAAGATTCCAAACATTTTATGAAAGCCATACTTCCTCCTCCAGATCATACAAAAGAAATACAAATTCCAGATGAGTTTATAAATAGATTTGGGAATGAACTCAAGAATGTTGCTATCATTATTGTTCCTGATGGTCGTGAATGGGAAATGGGACTGACGAAATGTGGTGAGCACGTTTTCCTTAGCAACAATTGGCAACAGTTTGCAGAATACTATTCCATCAGTTACGGTTGTTTTTTAGATTTCAAGTATGAAGGGAATTCAAAGTTTGATGTTGTTATATATGATACAACTTCTGTTGAGATTTCTTATCCATTCAAAACTCCAAGTACTAATGGAGATCAAAGCATAAAGGGTCCTAACTCTGATCCCAAAAGAGTGAATTGTGCTGCCAGTGAATTCAACCCAAAAAACCCTTATTTTCATTCAAAATCCGTCAAGGGCATTTTTGCGTACGTTCCTTCTGGTTTTGCTAAAAAGTATTTGATGCTAATGGTTCCGTTCATGCTCCAAAACTCTCAAGGAAAGCAGTGGGAAGTTTATTGTATTTCGAATACAAAAGGAAACTCATCAATGCGAATAACGAGTGGATTCAGTAAATTTGCAAGGGAAAACAATCTATTAGAGGGAGTTACATATGTGTTTGAGCTGATCAAGAGGAAGCCTGTTGTTGTGCTACAAGTTGCAGCAATTTGCACGCCTCCATGCGGAAGGTGTGCCCAGTCAATGACAGAAAATGAAGTAAGGGAATCGAAACATTTTAAGAAGGCCATACTTCCCTCGCCCATTCAAGACAAAGAGATAAAAATTCCAGATGAGTTTATAACAAGATTTGGGAACGAACTAAAGAATGTTGCTACAGTTACTGTTCCTGATGGTCGTGATTGGAAAATGAGATTGAAGAAACGCGACAATGACATTTTCTTTTGCAACGGATGGCAAGAGTTTGCAAAATACTATTCGTTAGGATATGGTTGCTACATATCTTTCAAATACGAAGGAAATTCAAAGTTTAGTGTTATTATATTTGATGTAACTTCGGTTGAGATTTGCTATCCACTCAAAACTCTAAGTACCAATGGAGAAACAAACACACAGTGTCCTACTCCTATGAAAAGTTCCAGGGTTGAAACAAGTGGCAGTCAAGTGAAAAAGCTCAAAATCAAGTTTGGACATGCTTTTAAAAGTGCAGAGGTTGCTGCCAATGAATTCAATCCAAAAAACCCTTATTTTTGTTCAAAAATTGCTAAGCGAAATCTTGTGAATGTTACTGCTAAATTTGCTCAAAAGTATCTAATGCCAAATGTTCCAATCGCACTCCAAAATTCTCAAGGAAAGCATTGGAAAGTTCATTGTATATTGTATAATCCCAAATCATTCTCAATGCAAATAACAATGGGATTTCCGAAATTTGTAAAGGACAACAATCTGACACATGGAGATTATTGTGTGTTTGAGTTGATCAAGGAGAAGCCGGTTGTGCTAAAAGTCACAATGTTTCGTGCGGTTGACTACGGCAAATCCTCTCTACTGTGA

Protein sequence

>Msa0487740

MKTHRQRCVPSPSPAPEKDSKHFMKAILPPPDHTKEIQIPDEFINRFGNELKNVAIIIVPDGREWEMGLTKCGEHVFLSNNWQQFAEYYSISYGCFLDFKYEGNSKFDVVIYDTTSVEISYPFKTPSTNGDQSIKGPNSDPKRVNCAASEFNPKNPYFHSKSVKGIFAYVPSGFAKKYLMLMVPFMLQNSQGKQWEVYCISNTKGNSSMRITSGFSKFARENNLLEGVTYVFELIKRKPVVVLQVAAICTPPCGRCAQSMTENEVRESKHFKKAILPSPIQDKEIKIPDEFITRFGNELKNVATVTVPDGRDWKMRLKKRDNDIFFCNGWQEFAKYYSLGYGCYISFKYEGNSKFSVIIFDVTSVEICYPLKTLSTNGETNTQCPTPMKSSRVETSGSQVKKLKIKFGHAFKSAEVAANEFNPKNPYFCSKIAKRNLVNVTAKFAQKYLMPNVPIALQNSQGKHWKVHCILYNPKSFSMQITMGFPKFVKDNNLTHGDYCVFELIKEKPVVLKVTMFRAVDYGKSSLL*