Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0487750 | XP_003598025.2 | 76.448 | 518 | 109 | 5 | 1 | 507 | 20 | 535 | 0.0 | 789 |
Msa0487750 | XP_003598025.2 | 77.122 | 542 | 104 | 6 | 508 | 1029 | 1 | 542 | 0.0 | 816 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0487750 | sp|Q8L3W1|VRN1_ARATH | 25.758 | 330 | 157 | 6 | 266 | 507 | 6 | 335 | 7.65e-25 | 110 |
Msa0487750 | sp|Q8L3W1|VRN1_ARATH | 44.828 | 87 | 48 | 0 | 786 | 872 | 6 | 92 | 1.23e-17 | 89.0 |
Msa0487750 | sp|Q8L3W1|VRN1_ARATH | 37.374 | 99 | 58 | 1 | 543 | 637 | 6 | 104 | 3.97e-15 | 81.6 |
Msa0487750 | sp|Q8L3W1|VRN1_ARATH | 37.374 | 99 | 58 | 1 | 23 | 117 | 6 | 104 | 6.28e-15 | 80.9 |
Msa0487750 | sp|Q8L3W1|VRN1_ARATH | 34.266 | 143 | 82 | 5 | 892 | 1028 | 205 | 341 | 1.86e-11 | 70.5 |
Msa0487750 | sp|Q8L3W1|VRN1_ARATH | 43.119 | 109 | 54 | 3 | 139 | 242 | 229 | 334 | 2.71e-11 | 69.7 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0487750 | G7IYE4 | 76.448 | 518 | 109 | 5 | 1 | 507 | 20 | 535 | 0.0 | 789 |
Msa0487750 | G7IYE4 | 77.122 | 542 | 104 | 6 | 508 | 1029 | 1 | 542 | 0.0 | 816 |
Gene ID | Type | Classification |
---|---|---|
Msa0487750 | TF | B3 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0487750 | MtrunA17_Chr3g0077361 | 74.436 | 532 | 101 | 6 | 508 | 1029 | 1 | 507 | 0.0 | 764 |
Msa0487750 | MtrunA17_Chr3g0077361 | 72.125 | 513 | 105 | 5 | 1 | 507 | 20 | 500 | 0.0 | 724 |
Msa0487750 | MtrunA17_Chr3g0077411 | 68.293 | 533 | 131 | 6 | 525 | 1029 | 1 | 523 | 0.0 | 697 |
Msa0487750 | MtrunA17_Chr3g0077411 | 63.498 | 526 | 163 | 7 | 1 | 507 | 1 | 516 | 0.0 | 630 |
Msa0487750 | MtrunA17_Chr3g0077411 | 46.607 | 560 | 213 | 13 | 246 | 765 | 5 | 518 | 7.87e-145 | 443 |
Msa0487750 | MtrunA17_Chr3g0077411 | 48.855 | 262 | 100 | 4 | 18 | 245 | 257 | 518 | 1.24e-66 | 233 |
Msa0487750 | MtrunA17_Chr4g0009491 | 74.150 | 441 | 86 | 3 | 37 | 468 | 11 | 432 | 0.0 | 654 |
Msa0487750 | MtrunA17_Chr4g0009491 | 63.594 | 434 | 123 | 4 | 557 | 975 | 11 | 424 | 8.25e-177 | 522 |
Msa0487750 | MtrunA17_Chr4g0009491 | 44.609 | 473 | 176 | 8 | 280 | 720 | 11 | 429 | 5.03e-111 | 351 |
Msa0487750 | MtrunA17_Chr4g0009491 | 52.582 | 213 | 69 | 3 | 800 | 1002 | 11 | 201 | 8.84e-58 | 205 |
Msa0487750 | MtrunA17_Chr4g0009491 | 51.691 | 207 | 74 | 2 | 18 | 198 | 220 | 426 | 2.80e-57 | 204 |
Msa0487750 | MtrunA17_Chr3g0077381 | 72.912 | 443 | 80 | 5 | 37 | 468 | 34 | 447 | 0.0 | 629 |
Msa0487750 | MtrunA17_Chr3g0077381 | 63.678 | 435 | 113 | 6 | 557 | 975 | 34 | 439 | 3.40e-173 | 513 |
Msa0487750 | MtrunA17_Chr3g0077381 | 44.280 | 472 | 171 | 7 | 280 | 720 | 34 | 444 | 2.94e-110 | 349 |
Msa0487750 | MtrunA17_Chr3g0077381 | 50.725 | 207 | 69 | 3 | 18 | 198 | 242 | 441 | 1.15e-53 | 194 |
Msa0487750 | MtrunA17_Chr3g0077381 | 48.498 | 233 | 64 | 5 | 800 | 1020 | 34 | 222 | 8.51e-52 | 189 |
Msa0487750 | MtrunA17_Chr3g0077461 | 63.750 | 480 | 124 | 9 | 558 | 1021 | 22 | 467 | 0.0 | 574 |
Msa0487750 | MtrunA17_Chr3g0077461 | 57.083 | 480 | 161 | 11 | 38 | 506 | 22 | 467 | 9.11e-166 | 495 |
Msa0487750 | MtrunA17_Chr3g0077461 | 44.821 | 502 | 197 | 11 | 281 | 760 | 22 | 465 | 1.26e-121 | 380 |
Msa0487750 | MtrunA17_Chr3g0077461 | 49.167 | 240 | 105 | 7 | 18 | 243 | 232 | 468 | 7.90e-54 | 195 |
Msa0487750 | MtrunA17_Chr5g0429931 | 66.946 | 239 | 69 | 1 | 801 | 1029 | 10 | 248 | 1.80e-103 | 323 |
Msa0487750 | MtrunA17_Chr5g0429931 | 64.655 | 232 | 77 | 1 | 281 | 507 | 10 | 241 | 9.11e-93 | 295 |
Msa0487750 | MtrunA17_Chr5g0429931 | 56.957 | 230 | 73 | 2 | 38 | 241 | 10 | 239 | 1.67e-72 | 240 |
Msa0487750 | MtrunA17_Chr5g0429931 | 55.411 | 231 | 75 | 4 | 558 | 761 | 10 | 239 | 2.70e-67 | 226 |
Msa0487750 | MtrunA17_Chr3g0077451 | 65.560 | 241 | 62 | 3 | 800 | 1029 | 10 | 240 | 6.94e-101 | 317 |
Msa0487750 | MtrunA17_Chr3g0077451 | 62.393 | 234 | 72 | 3 | 280 | 507 | 10 | 233 | 1.84e-89 | 286 |
Msa0487750 | MtrunA17_Chr3g0077451 | 59.459 | 222 | 73 | 3 | 37 | 241 | 10 | 231 | 5.83e-74 | 244 |
Msa0487750 | MtrunA17_Chr3g0077451 | 56.054 | 223 | 79 | 5 | 557 | 761 | 10 | 231 | 5.11e-66 | 222 |
Msa0487750 | MtrunA17_Chr3g0077431 | 63.033 | 211 | 57 | 3 | 830 | 1029 | 1 | 201 | 6.57e-82 | 264 |
Msa0487750 | MtrunA17_Chr3g0077431 | 58.824 | 204 | 68 | 3 | 310 | 507 | 1 | 194 | 2.46e-70 | 232 |
Msa0487750 | MtrunA17_Chr3g0077431 | 54.000 | 200 | 75 | 3 | 67 | 249 | 1 | 200 | 1.19e-55 | 191 |
Msa0487750 | MtrunA17_Chr3g0077431 | 52.332 | 193 | 73 | 5 | 587 | 761 | 1 | 192 | 8.34e-49 | 172 |
Msa0487750 | MtrunA17_Chr3g0077421 | 62.381 | 210 | 57 | 3 | 830 | 1027 | 1 | 200 | 1.72e-78 | 255 |
Msa0487750 | MtrunA17_Chr3g0077421 | 58.537 | 205 | 68 | 3 | 310 | 507 | 1 | 195 | 1.09e-67 | 225 |
Msa0487750 | MtrunA17_Chr3g0077421 | 54.922 | 193 | 69 | 3 | 67 | 241 | 1 | 193 | 1.13e-53 | 186 |
Msa0487750 | MtrunA17_Chr3g0077421 | 49.485 | 194 | 78 | 5 | 587 | 761 | 1 | 193 | 5.23e-44 | 158 |
Msa0487750 | MtrunA17_Chr3g0077441 | 62.381 | 210 | 57 | 3 | 830 | 1027 | 1 | 200 | 1.72e-78 | 255 |
Msa0487750 | MtrunA17_Chr3g0077441 | 58.537 | 205 | 68 | 3 | 310 | 507 | 1 | 195 | 1.09e-67 | 225 |
Msa0487750 | MtrunA17_Chr3g0077441 | 54.922 | 193 | 69 | 3 | 67 | 241 | 1 | 193 | 1.13e-53 | 186 |
Msa0487750 | MtrunA17_Chr3g0077441 | 49.485 | 194 | 78 | 5 | 587 | 761 | 1 | 193 | 5.23e-44 | 158 |
Msa0487750 | MtrunA17_Chr1g0162441 | 43.636 | 110 | 62 | 0 | 266 | 375 | 7 | 116 | 7.49e-25 | 108 |
Msa0487750 | MtrunA17_Chr1g0162441 | 43.860 | 114 | 58 | 3 | 786 | 899 | 7 | 114 | 6.27e-22 | 100 |
Msa0487750 | MtrunA17_Chr1g0162441 | 41.414 | 99 | 54 | 1 | 23 | 117 | 7 | 105 | 6.77e-20 | 94.0 |
Msa0487750 | MtrunA17_Chr1g0162441 | 40.367 | 109 | 60 | 2 | 543 | 646 | 7 | 115 | 8.88e-20 | 93.6 |
Msa0487750 | MtrunA17_Chr1g0162441 | 35.385 | 130 | 73 | 4 | 902 | 1024 | 268 | 393 | 4.27e-14 | 75.9 |
Msa0487750 | MtrunA17_Chr1g0162441 | 43.119 | 109 | 53 | 4 | 139 | 241 | 284 | 389 | 1.13e-11 | 68.2 |
Msa0487750 | MtrunA17_Chr3g0131891 | 28.621 | 290 | 161 | 7 | 265 | 510 | 18 | 305 | 5.11e-24 | 104 |
Msa0487750 | MtrunA17_Chr3g0131891 | 25.260 | 289 | 169 | 5 | 785 | 1026 | 18 | 306 | 5.73e-19 | 89.4 |
Msa0487750 | MtrunA17_Chr3g0131891 | 25.887 | 282 | 139 | 9 | 536 | 750 | 12 | 290 | 7.15e-16 | 80.1 |
Msa0487750 | MtrunA17_Chr3g0131891 | 23.929 | 280 | 148 | 6 | 16 | 231 | 12 | 290 | 2.68e-15 | 78.6 |
Msa0487750 | MtrunA17_Chr7g0233561 | 27.451 | 306 | 168 | 10 | 259 | 510 | 9 | 314 | 2.19e-23 | 102 |
Msa0487750 | MtrunA17_Chr7g0233561 | 26.537 | 309 | 164 | 11 | 779 | 1026 | 9 | 315 | 2.92e-20 | 93.2 |
Msa0487750 | MtrunA17_Chr7g0233561 | 24.232 | 293 | 147 | 8 | 22 | 240 | 17 | 308 | 4.36e-16 | 80.9 |
Msa0487750 | MtrunA17_Chr7g0233561 | 30.172 | 116 | 73 | 2 | 542 | 649 | 17 | 132 | 7.87e-12 | 67.8 |
Msa0487750 | MtrunA17_Chr8g0390841 | 26.403 | 303 | 148 | 8 | 786 | 1023 | 39 | 331 | 1.33e-21 | 100 |
Msa0487750 | MtrunA17_Chr8g0390841 | 27.365 | 296 | 157 | 11 | 266 | 507 | 39 | 330 | 7.23e-20 | 94.7 |
Msa0487750 | MtrunA17_Chr8g0390841 | 22.776 | 281 | 146 | 6 | 23 | 232 | 39 | 319 | 1.76e-12 | 71.2 |
Msa0487750 | MtrunA17_Chr4g0033961 | 26.790 | 377 | 221 | 13 | 263 | 605 | 3 | 358 | 1.36e-21 | 99.0 |
Msa0487750 | MtrunA17_Chr4g0033961 | 36.522 | 115 | 66 | 2 | 783 | 896 | 3 | 111 | 6.51e-18 | 87.8 |
Msa0487750 | MtrunA17_Chr4g0033961 | 37.255 | 102 | 60 | 1 | 20 | 117 | 3 | 104 | 1.52e-15 | 80.5 |
Msa0487750 | MtrunA17_Chr4g0033961 | 33.333 | 117 | 69 | 2 | 533 | 645 | 1 | 112 | 7.41e-15 | 78.2 |
Msa0487750 | MtrunA17_Chr4g0033961 | 35.606 | 132 | 74 | 4 | 902 | 1026 | 264 | 391 | 3.38e-14 | 76.3 |
Msa0487750 | MtrunA17_Chr4g0033961 | 43.103 | 116 | 55 | 5 | 135 | 242 | 274 | 386 | 2.35e-12 | 70.5 |
Msa0487750 | MtrunA17_Chr1g0162411 | 45.556 | 90 | 49 | 0 | 266 | 355 | 7 | 96 | 2.09e-20 | 95.5 |
Msa0487750 | MtrunA17_Chr1g0162411 | 42.708 | 96 | 54 | 1 | 786 | 881 | 7 | 101 | 6.15e-19 | 91.3 |
Msa0487750 | MtrunA17_Chr1g0162411 | 36.893 | 103 | 61 | 1 | 23 | 121 | 7 | 109 | 2.12e-15 | 80.1 |
Msa0487750 | MtrunA17_Chr1g0162411 | 35.577 | 104 | 63 | 1 | 543 | 642 | 7 | 110 | 1.84e-14 | 77.0 |
Msa0487750 | MtrunA17_Chr3g0103181 | 27.437 | 277 | 159 | 7 | 265 | 507 | 11 | 279 | 3.26e-20 | 92.0 |
Msa0487750 | MtrunA17_Chr3g0103181 | 26.259 | 278 | 156 | 7 | 785 | 1022 | 11 | 279 | 1.78e-18 | 87.0 |
Msa0487750 | MtrunA17_Chr3g0103181 | 27.106 | 273 | 138 | 10 | 22 | 240 | 11 | 276 | 8.91e-13 | 70.1 |
Msa0487750 | MtrunA17_Chr3g0103181 | 33.094 | 139 | 85 | 3 | 542 | 676 | 11 | 145 | 3.22e-12 | 68.6 |
Msa0487750 | MtrunA17_Chr3g0103171 | 26.054 | 261 | 154 | 4 | 801 | 1022 | 5 | 265 | 1.84e-19 | 89.7 |
Msa0487750 | MtrunA17_Chr3g0103171 | 26.217 | 267 | 151 | 7 | 281 | 507 | 5 | 265 | 4.38e-19 | 88.6 |
Msa0487750 | MtrunA17_Chr3g0103171 | 25.097 | 259 | 137 | 5 | 38 | 240 | 5 | 262 | 9.29e-13 | 69.7 |
Msa0487750 | MtrunA17_Chr3g0103171 | 40.476 | 84 | 46 | 1 | 558 | 637 | 5 | 88 | 1.36e-12 | 69.3 |
Msa0487750 | MtrunA17_Chr7g0233521 | 27.407 | 270 | 149 | 6 | 282 | 510 | 2 | 265 | 9.74e-19 | 87.8 |
Msa0487750 | MtrunA17_Chr7g0233521 | 26.740 | 273 | 144 | 7 | 802 | 1026 | 2 | 266 | 1.81e-18 | 87.0 |
Msa0487750 | MtrunA17_Chr7g0233521 | 33.333 | 87 | 54 | 1 | 558 | 640 | 1 | 87 | 5.99e-12 | 67.8 |
Msa0487750 | MtrunA17_Chr7g0233521 | 25.097 | 259 | 136 | 9 | 39 | 240 | 2 | 259 | 6.10e-12 | 67.4 |
Msa0487750 | MtrunA17_Chr5g0421851 | 36.025 | 161 | 88 | 4 | 875 | 1027 | 34 | 187 | 1.96e-18 | 84.3 |
Msa0487750 | MtrunA17_Chr5g0421851 | 39.623 | 106 | 63 | 1 | 402 | 507 | 78 | 182 | 3.17e-17 | 80.9 |
Msa0487750 | MtrunA17_Chr5g0421851 | 35.135 | 111 | 71 | 1 | 130 | 240 | 70 | 179 | 7.27e-12 | 65.5 |
Msa0487750 | MtrunA17_Chr5g0421921 | 41.284 | 109 | 63 | 1 | 919 | 1027 | 5 | 112 | 3.62e-18 | 81.3 |
Msa0487750 | MtrunA17_Chr5g0421921 | 39.623 | 106 | 63 | 1 | 402 | 507 | 3 | 107 | 6.87e-18 | 80.5 |
Msa0487750 | MtrunA17_Chr5g0421921 | 35.577 | 104 | 66 | 1 | 137 | 240 | 2 | 104 | 6.65e-11 | 60.5 |
Msa0487750 | MtrunA17_Chr5g0421731 | 41.284 | 109 | 63 | 1 | 919 | 1027 | 5 | 112 | 3.62e-18 | 81.3 |
Msa0487750 | MtrunA17_Chr5g0421731 | 39.623 | 106 | 63 | 1 | 402 | 507 | 3 | 107 | 6.87e-18 | 80.5 |
Msa0487750 | MtrunA17_Chr5g0421731 | 35.577 | 104 | 66 | 1 | 137 | 240 | 2 | 104 | 6.65e-11 | 60.5 |
Msa0487750 | MtrunA17_Chr7g0233531 | 28.413 | 271 | 145 | 9 | 282 | 510 | 2 | 265 | 5.43e-18 | 85.5 |
Msa0487750 | MtrunA17_Chr7g0233531 | 25.182 | 274 | 147 | 8 | 802 | 1026 | 2 | 266 | 4.57e-14 | 73.9 |
Msa0487750 | MtrunA17_Chr7g0233531 | 24.419 | 258 | 139 | 9 | 39 | 240 | 2 | 259 | 1.09e-12 | 69.7 |
Msa0487750 | MtrunA17_Chr5g0419201 | 36.735 | 98 | 62 | 0 | 259 | 356 | 9 | 106 | 6.32e-18 | 83.2 |
Msa0487750 | MtrunA17_Chr5g0419201 | 31.579 | 95 | 65 | 0 | 779 | 873 | 9 | 103 | 2.02e-13 | 70.1 |
Msa0487750 | MtrunA17_Chr5g0419201 | 31.538 | 130 | 83 | 3 | 543 | 667 | 16 | 144 | 1.48e-12 | 67.4 |
Msa0487750 | MtrunA17_Chr5g0419201 | 33.333 | 99 | 62 | 1 | 23 | 117 | 16 | 114 | 2.53e-12 | 67.0 |
Msa0487750 | MtrunA17_Chr1g0154161 | 26.502 | 283 | 167 | 9 | 265 | 509 | 29 | 308 | 3.74e-17 | 84.0 |
Msa0487750 | MtrunA17_Chr1g0163071 | 27.211 | 294 | 137 | 9 | 282 | 507 | 2 | 286 | 3.85e-17 | 83.6 |
Msa0487750 | MtrunA17_Chr4g0067431 | 28.000 | 300 | 157 | 10 | 265 | 507 | 14 | 311 | 1.14e-16 | 82.4 |
Msa0487750 | MtrunA17_Chr1g0162421 | 50.000 | 58 | 29 | 0 | 280 | 337 | 7 | 64 | 2.74e-16 | 74.3 |
Msa0487750 | MtrunA17_Chr1g0162421 | 48.276 | 58 | 30 | 0 | 800 | 857 | 7 | 64 | 2.23e-15 | 71.6 |
Msa0487750 | MtrunA17_Chr1g0162421 | 43.636 | 55 | 31 | 0 | 37 | 91 | 7 | 61 | 1.14e-12 | 63.9 |
Msa0487750 | MtrunA17_Chr1g0162421 | 40.000 | 55 | 33 | 0 | 557 | 611 | 7 | 61 | 4.58e-11 | 59.3 |
Msa0487750 | MtrunA17_Chr7g0233541 | 25.952 | 289 | 146 | 9 | 282 | 510 | 2 | 282 | 1.80e-15 | 78.6 |
Msa0487750 | MtrunA17_Chr7g0233541 | 26.027 | 292 | 139 | 10 | 802 | 1026 | 2 | 283 | 4.20e-13 | 71.2 |
Msa0487750 | MtrunA17_Chr7g0233541 | 31.250 | 112 | 66 | 3 | 39 | 140 | 2 | 112 | 2.05e-11 | 66.2 |
Msa0487750 | MtrunA17_Chr7g0233541 | 30.693 | 101 | 60 | 2 | 559 | 649 | 2 | 102 | 7.85e-11 | 64.3 |
Msa0487750 | MtrunA17_Chr7g0233571 | 39.130 | 92 | 56 | 0 | 265 | 356 | 9 | 100 | 1.85e-15 | 76.6 |
Msa0487750 | MtrunA17_Chr7g0233571 | 33.981 | 103 | 64 | 1 | 542 | 640 | 9 | 111 | 5.31e-14 | 72.4 |
Msa0487750 | MtrunA17_Chr7g0233571 | 33.663 | 101 | 63 | 1 | 22 | 118 | 9 | 109 | 1.32e-13 | 71.2 |
Msa0487750 | MtrunA17_Chr7g0233571 | 33.945 | 109 | 72 | 0 | 785 | 893 | 9 | 117 | 4.46e-13 | 69.7 |
Msa0487750 | MtrunA17_Chr1g0208771 | 24.825 | 286 | 148 | 10 | 281 | 507 | 12 | 289 | 1.91e-15 | 80.5 |
Msa0487750 | MtrunA17_Chr3g0103151 | 34.400 | 125 | 74 | 2 | 265 | 389 | 11 | 127 | 6.62e-15 | 73.6 |
Msa0487750 | MtrunA17_Chr3g0103151 | 33.333 | 147 | 90 | 3 | 542 | 684 | 11 | 153 | 1.78e-13 | 69.3 |
Msa0487750 | MtrunA17_Chr3g0103151 | 33.898 | 118 | 75 | 2 | 785 | 902 | 11 | 125 | 2.14e-13 | 69.3 |
Msa0487750 | MtrunA17_Chr3g0103151 | 31.646 | 158 | 84 | 6 | 22 | 163 | 11 | 160 | 4.71e-13 | 68.2 |
Msa0487750 | MtrunA17_Chr1g0163221 | 27.018 | 285 | 162 | 9 | 265 | 507 | 10 | 290 | 7.56e-15 | 77.4 |
Msa0487750 | MtrunA17_Chr3g0103191 | 26.423 | 246 | 133 | 7 | 786 | 989 | 12 | 251 | 3.11e-13 | 70.9 |
Msa0487750 | MtrunA17_Chr3g0103191 | 41.111 | 90 | 51 | 1 | 266 | 355 | 12 | 99 | 4.92e-13 | 70.5 |
Msa0487750 | MtrunA17_Chr3g0103191 | 38.384 | 99 | 55 | 2 | 543 | 637 | 12 | 108 | 1.72e-11 | 65.9 |
Msa0487750 | MtrunA17_Chr3g0103191 | 37.374 | 99 | 56 | 2 | 23 | 117 | 12 | 108 | 7.14e-11 | 63.9 |
Msa0487750 | MtrunA17_Chr6g0467351 | 33.094 | 139 | 85 | 3 | 250 | 382 | 1 | 137 | 8.93e-13 | 69.3 |
Msa0487750 | MtrunA17_Chr1g0163131 | 24.272 | 309 | 170 | 11 | 248 | 505 | 9 | 304 | 9.16e-13 | 70.5 |
Msa0487750 | MtrunA17_Chr1g0154041 | 35.165 | 91 | 58 | 1 | 265 | 355 | 15 | 104 | 1.61e-12 | 71.6 |
Msa0487750 | MtrunA17_Chr1g0171611 | 24.815 | 270 | 166 | 9 | 784 | 1024 | 7 | 268 | 2.56e-12 | 68.9 |
Msa0487750 | MtrunA17_Chr1g0171611 | 24.151 | 265 | 173 | 6 | 264 | 506 | 7 | 265 | 3.22e-12 | 68.6 |
Msa0487750 | MtrunA17_Chr1g0154101 | 33.065 | 124 | 75 | 3 | 240 | 356 | 150 | 272 | 1.49e-11 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0487750 | AT3G18990.1 | 25.758 | 330 | 157 | 6 | 266 | 507 | 6 | 335 | 7.77e-26 | 110 |
Msa0487750 | AT3G18990.1 | 44.828 | 87 | 48 | 0 | 786 | 872 | 6 | 92 | 1.25e-18 | 89.0 |
Msa0487750 | AT3G18990.1 | 37.374 | 99 | 58 | 1 | 543 | 637 | 6 | 104 | 4.04e-16 | 81.6 |
Msa0487750 | AT3G18990.1 | 37.374 | 99 | 58 | 1 | 23 | 117 | 6 | 104 | 6.38e-16 | 80.9 |
Msa0487750 | AT3G18990.1 | 34.266 | 143 | 82 | 5 | 892 | 1028 | 205 | 341 | 1.89e-12 | 70.5 |
Msa0487750 | AT3G18990.1 | 43.119 | 109 | 54 | 3 | 139 | 242 | 229 | 334 | 2.76e-12 | 69.7 |
Msa0487750 | AT3G18990.2 | 25.758 | 330 | 157 | 6 | 266 | 507 | 6 | 335 | 1.34e-25 | 110 |
Msa0487750 | AT3G18990.2 | 44.828 | 87 | 48 | 0 | 786 | 872 | 6 | 92 | 2.23e-18 | 89.0 |
Msa0487750 | AT3G18990.2 | 37.374 | 99 | 58 | 1 | 543 | 637 | 6 | 104 | 5.36e-16 | 81.6 |
Msa0487750 | AT3G18990.2 | 37.374 | 99 | 58 | 1 | 23 | 117 | 6 | 104 | 8.90e-16 | 80.9 |
Msa0487750 | AT3G18990.2 | 34.722 | 144 | 82 | 5 | 892 | 1029 | 205 | 342 | 8.56e-13 | 71.6 |
Msa0487750 | AT3G18990.2 | 43.119 | 109 | 54 | 3 | 139 | 242 | 229 | 334 | 3.03e-12 | 70.1 |
Msa0487750 | AT3G18960.2 | 36.154 | 130 | 76 | 2 | 239 | 361 | 1 | 130 | 1.10e-16 | 80.1 |
Msa0487750 | AT3G18960.2 | 33.333 | 114 | 72 | 1 | 530 | 639 | 17 | 130 | 5.87e-15 | 75.1 |
Msa0487750 | AT3G18960.2 | 35.294 | 119 | 74 | 1 | 755 | 873 | 2 | 117 | 6.77e-14 | 72.0 |
Msa0487750 | AT3G18960.2 | 32.407 | 108 | 69 | 1 | 16 | 119 | 23 | 130 | 2.32e-13 | 70.5 |
Msa0487750 | AT3G18960.1 | 36.154 | 130 | 76 | 2 | 239 | 361 | 1 | 130 | 1.98e-16 | 79.7 |
Msa0487750 | AT3G18960.1 | 33.333 | 114 | 72 | 1 | 530 | 639 | 17 | 130 | 1.24e-14 | 74.3 |
Msa0487750 | AT3G18960.1 | 35.294 | 119 | 74 | 1 | 755 | 873 | 2 | 117 | 8.19e-14 | 72.0 |
Msa0487750 | AT3G18960.1 | 32.407 | 108 | 69 | 1 | 16 | 119 | 23 | 130 | 5.52e-13 | 69.7 |
Msa0487750 | AT4G01580.1 | 39.806 | 103 | 57 | 1 | 264 | 361 | 28 | 130 | 4.30e-16 | 78.2 |
Msa0487750 | AT4G01580.1 | 36.134 | 119 | 73 | 1 | 755 | 873 | 2 | 117 | 2.23e-15 | 76.3 |
Msa0487750 | AT4G01580.1 | 31.897 | 116 | 75 | 1 | 530 | 641 | 17 | 132 | 2.09e-14 | 73.2 |
Msa0487750 | AT4G01580.1 | 33.333 | 108 | 68 | 1 | 16 | 119 | 23 | 130 | 9.12e-14 | 71.6 |
Msa0487750 | AT1G26680.6 | 22.994 | 648 | 391 | 31 | 22 | 607 | 14 | 615 | 4.50e-16 | 83.6 |
Msa0487750 | AT1G26680.5 | 22.994 | 648 | 391 | 31 | 22 | 607 | 14 | 615 | 5.43e-16 | 83.6 |
Msa0487750 | AT1G49475.1 | 38.739 | 111 | 62 | 2 | 264 | 369 | 32 | 141 | 2.53e-15 | 75.9 |
Msa0487750 | AT1G49475.1 | 33.594 | 128 | 80 | 2 | 524 | 647 | 15 | 141 | 4.24e-15 | 75.5 |
Msa0487750 | AT1G49475.1 | 32.143 | 140 | 82 | 3 | 1 | 128 | 4 | 142 | 5.82e-14 | 72.0 |
Msa0487750 | AT1G49475.1 | 38.202 | 89 | 54 | 1 | 784 | 872 | 32 | 119 | 4.65e-11 | 63.5 |
Msa0487750 | AT1G49480.3 | 35.338 | 133 | 76 | 4 | 902 | 1028 | 98 | 226 | 4.69e-14 | 73.2 |
Msa0487750 | AT1G49480.3 | 45.045 | 111 | 51 | 5 | 139 | 243 | 114 | 220 | 3.48e-13 | 70.5 |
Msa0487750 | AT1G49480.1 | 35.338 | 133 | 76 | 4 | 902 | 1028 | 98 | 226 | 4.69e-14 | 73.2 |
Msa0487750 | AT1G49480.1 | 45.045 | 111 | 51 | 5 | 139 | 243 | 114 | 220 | 3.48e-13 | 70.5 |
Msa0487750 | AT1G49480.2 | 35.338 | 133 | 76 | 4 | 902 | 1028 | 98 | 226 | 4.69e-14 | 73.2 |
Msa0487750 | AT1G49480.2 | 45.045 | 111 | 51 | 5 | 139 | 243 | 114 | 220 | 3.48e-13 | 70.5 |
Msa0487750 | AT1G26680.3 | 21.527 | 655 | 403 | 28 | 22 | 607 | 14 | 626 | 3.31e-12 | 71.2 |
Msa0487750 | AT1G26680.4 | 21.933 | 538 | 337 | 23 | 22 | 501 | 14 | 526 | 1.20e-11 | 69.7 |
Msa0487750 | AT1G26680.2 | 21.473 | 638 | 392 | 27 | 39 | 607 | 16 | 613 | 1.39e-11 | 69.3 |
Msa0487750 | AT1G26680.1 | 22.202 | 545 | 327 | 24 | 22 | 501 | 14 | 526 | 1.46e-11 | 69.3 |
Msa0487750 | AT3G18960.3 | 37.500 | 88 | 50 | 1 | 279 | 361 | 6 | 93 | 1.89e-11 | 64.3 |
Msa0487750 | AT2G24645.1 | 21.305 | 521 | 330 | 24 | 20 | 503 | 3 | 480 | 6.30e-11 | 66.6 |
Find 181 sgRNAs with CRISPR-Local
Find 558 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTGCTTTCCTTGTGAATTT+TGG | 0.083618 | 3_4:-6883906 | None:intergenic |
ACTGCTTTCCTTGATAATTT+TGG | 0.125823 | 3_4:-6889921 | None:intergenic |
AATGCTTTCCTTGAGAATTT+TGG | 0.134641 | 3_4:-6885429 | None:intergenic |
GAATACTATTCTATTTATTA+TGG | 0.217855 | 3_4:+6883517 | Msa0487750:CDS |
GAATACTATTCTATTTATTA+TGG | 0.217855 | 3_4:+6889527 | Msa0487750:CDS |
TTGTTGTCCGTTATAAAATT+AGG | 0.232666 | 3_4:-6891448 | None:intergenic |
GATGAGTTTATAACAAGATT+TGG | 0.242784 | 3_4:+6890767 | Msa0487750:CDS |
GATGAGTTCATAACAAGATT+TGG | 0.255970 | 3_4:+6884834 | Msa0487750:CDS |
TTCAAAACTTCAAGTGTTAC+TGG | 0.260689 | 3_4:+6891013 | Msa0487750:CDS |
AATTACTATTCGTTAGGATA+TGG | 0.265897 | 3_4:+6884972 | Msa0487750:CDS |
GGAAAGCAGTGGGAAGTTTC+TGG | 0.267335 | 3_4:+6889934 | Msa0487750:CDS |
TATTGTGTATTGCATGAAAA+AGG | 0.278258 | 3_4:+6883937 | Msa0487750:CDS |
TACTATCTCTTTGTCATGAA+TGG | 0.282879 | 3_4:-6890318 | None:intergenic |
AAATACTATTCGTTAGGATA+TGG | 0.294914 | 3_4:+6890905 | Msa0487750:CDS |
GAGCTTGAACGGAACCTTTA+GGG | 0.299957 | 3_4:-6883884 | None:intergenic |
CTCCATTAGTCCTCCGAGTT+TGG | 0.310150 | 3_4:-6889637 | None:intergenic |
TACTATCTCTTTGTCATGAA+TGG | 0.314672 | 3_4:-6884306 | None:intergenic |
AAGGGAAAACAATCTATTAA+AGG | 0.316256 | 3_4:+6884002 | Msa0487750:CDS |
GGCAGCATCCTTTGATCTTT+CGG | 0.316735 | 3_4:-6889690 | None:intergenic |
ATGCGAATAACGGGTGGATT+TGG | 0.321640 | 3_4:+6883970 | Msa0487750:CDS |
AAGTGAGTGTCATGGGAAAA+AGG | 0.323227 | 3_4:+6891087 | Msa0487750:CDS |
TATGGCCTTCTTGAAATGTT+TGG | 0.331141 | 3_4:-6890285 | None:intergenic |
ACGAGTGGATTCTATAGATT+TGG | 0.332725 | 3_4:+6889994 | Msa0487750:CDS |
CAATGACAGAAAAGGAAGTT+AGG | 0.334106 | 3_4:+6890258 | Msa0487750:CDS |
GGAGCTTGAACGGAACCTTT+AGG | 0.336035 | 3_4:-6883885 | None:intergenic |
TGGAGCTTTGTAGGAACATT+TGG | 0.337830 | 3_4:-6891343 | None:intergenic |
GCTCTTCTGGAAGCAGAGTT+AGG | 0.343489 | 3_4:-6883667 | None:intergenic |
CTACTTCTATGAAAAGTTCC+AGG | 0.344709 | 3_4:+6885123 | Msa0487750:CDS |
TCCCTTTGTATTTGAAAGAT+AGG | 0.356495 | 3_4:-6890934 | None:intergenic |
TCCATTGTGTAGTATGTTCC+TGG | 0.362474 | 3_4:+6889853 | Msa0487750:intron |
GGACTAGCACACTTTGTGTT+TGG | 0.364884 | 3_4:-6891040 | None:intergenic |
ATGAGTTTATAACAAGATTT+GGG | 0.367534 | 3_4:+6890768 | Msa0487750:CDS |
TGGAGTGCGATTGGAACATT+TGG | 0.367737 | 3_4:-6885409 | None:intergenic |
TGCATAGCAGCCAAAGGCTT+TGG | 0.374814 | 3_4:-6889747 | None:intergenic |
CGATGGTCGTGAATGGGAAA+TGG | 0.374916 | 3_4:+6883438 | Msa0487750:CDS |
ATGAATGGGCGAGGGAAGTA+TGG | 0.376143 | 3_4:-6884291 | None:intergenic |
ATGAATGGGCGAGGGAAGTA+TGG | 0.376143 | 3_4:-6890303 | None:intergenic |
ATGAGTTCATAACAAGATTT+GGG | 0.379410 | 3_4:+6884835 | Msa0487750:CDS |
TGGAGCATGAACGGAACATT+TGG | 0.383147 | 3_4:-6889901 | None:intergenic |
AGCATGTTTAGACACGCTTT+TGG | 0.391587 | 3_4:-6891110 | None:intergenic |
TGATGGTCGTGAATGGGAAT+TGG | 0.392554 | 3_4:+6889448 | Msa0487750:CDS |
TTCAAAACTTCAAGTACTAA+TGG | 0.395849 | 3_4:+6883625 | Msa0487750:CDS |
GAGCTCAGACAGTTTATGTT+TGG | 0.396072 | 3_4:-6889662 | None:intergenic |
GTGGGAAGTTTCTGGTGTAT+TGG | 0.397299 | 3_4:+6889942 | Msa0487750:CDS |
AATCTTGTTATAAACTCATC+TGG | 0.413404 | 3_4:-6890764 | None:intergenic |
ATTTGCATTGAGAATGAATT+GGG | 0.414962 | 3_4:-6885478 | None:intergenic |
TTCCAAACTCGGAGGACTAA+TGG | 0.416125 | 3_4:+6889635 | Msa0487750:CDS |
AATCTTGTTATGAACTCATC+TGG | 0.420225 | 3_4:-6884831 | None:intergenic |
TTTCTGTCTTTCAAATATGA+AGG | 0.422326 | 3_4:+6884999 | Msa0487750:CDS |
TTTGCAAATTACTATTCGTT+AGG | 0.423437 | 3_4:+6884966 | Msa0487750:CDS |
ACTATCTCTTTGTCATGAAT+GGG | 0.425221 | 3_4:-6890317 | None:intergenic |
TTTGCAAAATACTATTCGTT+AGG | 0.426106 | 3_4:+6890899 | Msa0487750:CDS |
TTTGAATCTTTCTCCGGTGC+TGG | 0.429033 | 3_4:-6882578 | None:intergenic |
CAGTTCCCGATGGTCGTGAT+TGG | 0.434376 | 3_4:+6884886 | Msa0487750:CDS |
CAGTTCCTGATGGTCGTGAT+TGG | 0.434376 | 3_4:+6890819 | Msa0487750:CDS |
AGGGAAAACAATCTATTAAA+GGG | 0.437546 | 3_4:+6884003 | Msa0487750:CDS |
TATTGCAATGCAGCCTCCAC+AGG | 0.439091 | 3_4:+6890220 | Msa0487750:intron |
TATTTAGATTTCAAGTATGA+AGG | 0.439885 | 3_4:+6883544 | Msa0487750:intron |
CAATGACAGAAAAGGAAGTA+AGG | 0.446214 | 3_4:+6884246 | Msa0487750:CDS |
TATTGCAATGCAGCCTCCAC+GGG | 0.446625 | 3_4:+6884208 | Msa0487750:intron |
ACTATCTCTTTGTCATGAAT+GGG | 0.448674 | 3_4:-6884305 | None:intergenic |
TATTTAGATTTCAAATATGA+AGG | 0.449992 | 3_4:+6889554 | Msa0487750:intron |
ATTGTGACTTCTAGCACAAC+CGG | 0.451587 | 3_4:-6891517 | None:intergenic |
TTTGAATCCTTCTCCGGCGA+CGG | 0.453621 | 3_4:-6888586 | None:intergenic |
TATTTGCATTGAGAATGAAT+TGG | 0.458395 | 3_4:-6885479 | None:intergenic |
ACACTCACTTGTTTCAACCT+TGG | 0.458460 | 3_4:-6891074 | None:intergenic |
CTGTTCCCGATGGTCGTGAA+TGG | 0.460301 | 3_4:+6883431 | Msa0487750:CDS |
AGATCACACATGCGAATAAC+GGG | 0.463203 | 3_4:+6883961 | Msa0487750:CDS |
ACCTATCTTTCAAATACAAA+GGG | 0.468933 | 3_4:+6890933 | Msa0487750:CDS |
TTGTGTATTTGAGTTGATCA+AGG | 0.476643 | 3_4:+6885555 | Msa0487750:CDS |
ATGTGTTCCGTCGCCGGAGA+AGG | 0.478623 | 3_4:+6888579 | Msa0487750:CDS |
TTTCTTATCCATTCCAAACT+CGG | 0.478870 | 3_4:+6889624 | Msa0487750:CDS |
AAAATTCTCAAGGAAAGCAT+TGG | 0.485732 | 3_4:+6885431 | Msa0487750:CDS |
AATGACAGAAAAGGAAGTTA+GGG | 0.489586 | 3_4:+6890259 | Msa0487750:CDS |
TTCTGTCTTTCAAATATGAA+GGG | 0.490414 | 3_4:+6885000 | Msa0487750:CDS |
TCCGGTGCTGGTGACGGTGT+CGG | 0.491612 | 3_4:-6882566 | None:intergenic |
CTCTTTGTCATGAATGGGCG+AGG | 0.492559 | 3_4:-6884300 | None:intergenic |
CTCTTTGTCATGAATGGGCG+AGG | 0.492559 | 3_4:-6890312 | None:intergenic |
GATGGTCGTGAATGGGAATT+GGG | 0.494055 | 3_4:+6889449 | Msa0487750:CDS |
CATTTCCCATTCACGACCAT+CGG | 0.495250 | 3_4:-6883437 | None:intergenic |
CATTCTCAATGCAAATAACA+AGG | 0.496017 | 3_4:+6885485 | Msa0487750:CDS |
AATTCCCATTCACGACCATC+AGG | 0.496167 | 3_4:-6889446 | None:intergenic |
GTAACTTGTAACACCACAAC+AGG | 0.496207 | 3_4:-6890075 | None:intergenic |
GATGGTCGTGAATGGGAAAT+GGG | 0.497506 | 3_4:+6883439 | Msa0487750:CDS |
ACACAAAGTGTGCTAGTCCT+AGG | 0.498715 | 3_4:+6891044 | Msa0487750:CDS |
TCTTTCTCCGGTGCTGGTGA+CGG | 0.501721 | 3_4:-6882572 | None:intergenic |
ATTTCCCATTCACGACCATC+GGG | 0.501758 | 3_4:-6883436 | None:intergenic |
TACCTATCTTTCAAATACAA+AGG | 0.508968 | 3_4:+6890932 | Msa0487750:CDS |
GTGGATTTGGTAAATTTGCA+AGG | 0.510118 | 3_4:+6883983 | Msa0487750:CDS |
GCTGTAACAAGTAGTACAAC+AGG | 0.510742 | 3_4:-6884060 | None:intergenic |
GAGAAGATGTGTTCCGTCGC+CGG | 0.510842 | 3_4:+6888573 | Msa0487750:CDS |
CTGTTCCTGATGGTCGTGAA+TGG | 0.512643 | 3_4:+6889441 | Msa0487750:CDS |
TTGAAACAAGTGAGTGTCAT+GGG | 0.514216 | 3_4:+6891080 | Msa0487750:CDS |
TGTTCCCGATGGTCGTGAAT+GGG | 0.514313 | 3_4:+6883432 | Msa0487750:CDS |
ACTGTTGCCAATTGTTGCTA+AGG | 0.515477 | 3_4:-6883489 | None:intergenic |
ACTGTTGCCAATTGTTGCTA+AGG | 0.515477 | 3_4:-6889499 | None:intergenic |
AAGATCACACATGCGAATAA+CGG | 0.515693 | 3_4:+6883960 | Msa0487750:CDS |
TTCATGCTCCAAAATTATCA+AGG | 0.518713 | 3_4:+6889913 | Msa0487750:CDS |
ACAAAGCTCCAAAATTCTGA+TGG | 0.522166 | 3_4:+6891355 | Msa0487750:CDS |
TGCCCAGTCAATGACAGAAA+AGG | 0.524540 | 3_4:+6884238 | Msa0487750:CDS |
TGCCCAGTCAATGACAGAAA+AGG | 0.524540 | 3_4:+6890250 | Msa0487750:CDS |
TCCGACACCGTCACCAGCAC+CGG | 0.525115 | 3_4:+6882565 | Msa0487750:CDS |
ACTGCCACTTGTTTCAACCC+TGG | 0.525622 | 3_4:-6885141 | None:intergenic |
CTCTGCTTCCGAAAGATCAA+AGG | 0.527426 | 3_4:+6889682 | Msa0487750:CDS |
TGAGTTGATCAAGGAGAAGC+CGG | 0.530941 | 3_4:+6885564 | Msa0487750:CDS |
GTGTCGGAACACATCTTCTC+CGG | 0.535373 | 3_4:-6882550 | None:intergenic |
ATTTAGATTTCAAGTATGAA+GGG | 0.536271 | 3_4:+6883545 | Msa0487750:intron |
GCGACGGAACACATCTTCTC+CGG | 0.538230 | 3_4:-6888570 | None:intergenic |
TGGGCACACCTTCCCTGTGG+AGG | 0.538744 | 3_4:-6890233 | None:intergenic |
GTGGATTCTATAGATTTGGA+AGG | 0.539846 | 3_4:+6889998 | Msa0487750:CDS |
ATTTAGATTTCAAATATGAA+GGG | 0.541446 | 3_4:+6889555 | Msa0487750:intron |
GTTGAAACAAGTGGCAGTCA+AGG | 0.541942 | 3_4:+6885146 | Msa0487750:CDS |
CCTCACCGCATATTTCGTCT+TGG | 0.545297 | 3_4:-6891200 | None:intergenic |
ACAAGTTACTGCTTCTTGCA+CGG | 0.545719 | 3_4:+6890089 | Msa0487750:CDS |
TTAGTCCTCCGAGTTTGGAA+TGG | 0.546192 | 3_4:-6889632 | None:intergenic |
AGATCAAAGGATGCTGCCAA+TGG | 0.547942 | 3_4:+6889695 | Msa0487750:CDS |
ATCGTCTATGCGAATAGTGA+AGG | 0.551631 | 3_4:+6891420 | Msa0487750:CDS |
TTATTGCAATGCAGCCTCCA+CGG | 0.552353 | 3_4:+6884207 | Msa0487750:intron |
GGAATCCAAACATTTCAAGA+AGG | 0.552761 | 3_4:+6890280 | Msa0487750:CDS |
AGTGTGCTAGTCCTAGGAAA+AGG | 0.553447 | 3_4:+6891050 | Msa0487750:CDS |
TGTTCCTGATGGTCGTGAAT+GGG | 0.557831 | 3_4:+6889442 | Msa0487750:CDS |
TGAAAAGTATCTGACCCTAA+AGG | 0.565833 | 3_4:+6883870 | Msa0487750:CDS |
AATTTCTAAGCGAAATCTTG+TGG | 0.569288 | 3_4:+6885262 | Msa0487750:CDS |
AAAATTATCAAGGAAAGCAG+TGG | 0.569536 | 3_4:+6889923 | Msa0487750:CDS |
AATGACAGAAAAGGAAGTAA+GGG | 0.571733 | 3_4:+6884247 | Msa0487750:CDS |
TGTTCCTGGTGAATTTGCTA+AGG | 0.578362 | 3_4:+6889867 | Msa0487750:CDS |
ATTCTCAATGCAAATAACAA+GGG | 0.579626 | 3_4:+6885486 | Msa0487750:CDS |
TTCTCAATGCAAATAACAAG+GGG | 0.581315 | 3_4:+6885487 | Msa0487750:CDS |
TACTTCTATGAAAAGTTCCA+GGG | 0.583386 | 3_4:+6885124 | Msa0487750:CDS |
TGGATTTGGTAAATTTGCAA+GGG | 0.592515 | 3_4:+6883984 | Msa0487750:CDS |
ATGTGTTTGAGCTGATCAAG+AGG | 0.597303 | 3_4:+6884034 | Msa0487750:CDS |
ATCGCACTCCAAAATTCTCA+AGG | 0.598710 | 3_4:+6885421 | Msa0487750:CDS |
AAAATTCACAAGGAAAGCAG+TGG | 0.601932 | 3_4:+6883908 | Msa0487750:CDS |
CAATGCAGCCTCCACAGGGA+AGG | 0.602685 | 3_4:+6890225 | Msa0487750:intron |
GCTAAGATTACTGTTCCCGA+TGG | 0.603036 | 3_4:+6883421 | Msa0487750:CDS |
ACAACTTTGAGCTGATCAAG+AGG | 0.603297 | 3_4:+6890049 | Msa0487750:CDS |
AAATTATCAAGGAAAGCAGT+GGG | 0.608378 | 3_4:+6889924 | Msa0487750:CDS |
AATAATCTCCATGTGTCAGA+TGG | 0.608955 | 3_4:-6885534 | None:intergenic |
GCTACAGTTACAGTTCCTGA+TGG | 0.609577 | 3_4:+6890809 | Msa0487750:CDS |
GTTGAAACAAGTGAGTGTCA+TGG | 0.609710 | 3_4:+6891079 | Msa0487750:CDS |
ACAAAACAATGAAGACTCGC+CGG | 0.610644 | 3_4:+6882531 | None:intergenic |
AAATTCTGATGGAAAACAGT+GGG | 0.613196 | 3_4:+6891366 | Msa0487750:CDS |
TTGAAACAAGTGGCAGTCAA+GGG | 0.614317 | 3_4:+6885147 | Msa0487750:CDS |
TACTGCATAAAAGCCCCTGA+CGG | 0.614950 | 3_4:-6883743 | None:intergenic |
AAGAAACAATGAAGACTCAC+CGG | 0.615286 | 3_4:+6888551 | Msa0487750:CDS |
TCGTCTATGCGAATAGTGAA+GGG | 0.615382 | 3_4:+6891421 | Msa0487750:CDS |
ACTTGTTACAGCGATTTGCA+CGG | 0.615517 | 3_4:+6884071 | Msa0487750:CDS |
AAGGGAAAACAACCTATCAA+AGG | 0.616647 | 3_4:+6890017 | Msa0487750:CDS |
TGAGCTCATCAAGAAGAAGC+CGG | 0.617788 | 3_4:+6891498 | Msa0487750:CDS |
TGGATTCTATAGATTTGGAA+GGG | 0.619936 | 3_4:+6889999 | Msa0487750:CDS |
GACTGGGCACACCTTCCCTG+TGG | 0.620586 | 3_4:-6890236 | None:intergenic |
AAAATTCTGATGGAAAACAG+TGG | 0.620787 | 3_4:+6891365 | Msa0487750:CDS |
GCTAAGATTACTGTTCCTGA+TGG | 0.622666 | 3_4:+6889431 | Msa0487750:CDS |
TGCTCCTTAGCAAATTCACC+AGG | 0.628603 | 3_4:-6889871 | None:intergenic |
AGTTCCAGGGTTGAAACAAG+TGG | 0.632824 | 3_4:+6885137 | Msa0487750:CDS |
TGGGCAGACATTCCCCGTGG+AGG | 0.633574 | 3_4:-6884221 | None:intergenic |
CCTCACTGCATAGCAGCCAA+AGG | 0.634621 | 3_4:-6889753 | None:intergenic |
AAATTCACAAGGAAAGCAGT+GGG | 0.637805 | 3_4:+6883909 | Msa0487750:CDS |
TCAGCAATGCGAATTACGAG+TGG | 0.638532 | 3_4:+6889979 | Msa0487750:CDS |
ACATGCCTTTAAAAGTGCAG+AGG | 0.638536 | 3_4:+6885193 | Msa0487750:CDS |
TTTCGATCAAAATCCGTCAG+GGG | 0.644334 | 3_4:+6883730 | Msa0487750:CDS |
AAGGACAACCATCTGACACA+TGG | 0.646280 | 3_4:+6885526 | Msa0487750:CDS |
TCTTTGTCATGAATGGGCGA+GGG | 0.647829 | 3_4:-6884299 | None:intergenic |
TCTTTGTCATGAATGGGCGA+GGG | 0.647829 | 3_4:-6890311 | None:intergenic |
CTTATCCATTCCAAACTCGG+AGG | 0.649382 | 3_4:+6889627 | Msa0487750:CDS |
GCTACAATTACAGTTCCCGA+TGG | 0.653468 | 3_4:+6884876 | Msa0487750:CDS |
TAGTCCTAGGAAAAGGTCCA+AGG | 0.655098 | 3_4:+6891057 | Msa0487750:CDS |
GATCAAGAGGAAGCCTGTTG+TGG | 0.656312 | 3_4:+6890062 | Msa0487750:CDS |
TTCAAGCTCCAAAATTCACA+AGG | 0.659089 | 3_4:+6883898 | Msa0487750:CDS |
TCGCATAGACGATGATCTGA+CGG | 0.661216 | 3_4:-6891410 | None:intergenic |
ACATGCTTCTACAAGAGCAG+AGG | 0.662151 | 3_4:+6891126 | Msa0487750:CDS |
ACGGACAACAATCTGTCACA+TGG | 0.662347 | 3_4:+6891460 | Msa0487750:CDS |
ATTGCAATGCAGCCTCCACA+GGG | 0.663913 | 3_4:+6890221 | Msa0487750:intron |
TCACACATGCGAATAACGGG+TGG | 0.671816 | 3_4:+6883964 | Msa0487750:CDS |
TACTTCACAGCAAAATCACA+AGG | 0.676887 | 3_4:-6891313 | None:intergenic |
AAAATGAGATTGAAGAAACG+CGG | 0.691481 | 3_4:+6890842 | Msa0487750:CDS |
GAATTGGGACTGAAGAAATG+TGG | 0.709005 | 3_4:+6889464 | Msa0487750:CDS |
GAAATGGGACTGAAGAAATG+TGG | 0.715375 | 3_4:+6883454 | Msa0487750:CDS |
GACTGGGCAGACATTCCCCG+TGG | 0.720587 | 3_4:-6884224 | None:intergenic |
ATTGCAATGCAGCCTCCACG+GGG | 0.736037 | 3_4:+6884209 | Msa0487750:intron |
AATCGCCAAGACGAAATATG+CGG | 0.738605 | 3_4:+6891195 | Msa0487750:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTAATTCTTCTTATTA+TGG | - | chr3_4:6884476-6884495 | None:intergenic | 10.0% |
!! | TCTTACTTATTATTTATTTA+AGG | + | chr3_4:6886073-6886092 | Msa0487750:intron | 10.0% |
!!! | ATTTCTTTTTTCTTTTTTAT+AGG | - | chr3_4:6886366-6886385 | None:intergenic | 10.0% |
!!! | TTTTTTTATTTATTTTGAAG+AGG | + | chr3_4:6886604-6886623 | Msa0487750:intron | 10.0% |
!!! | TTTTTTATTTATTTTGAAGA+GGG | + | chr3_4:6886605-6886624 | Msa0487750:intron | 10.0% |
!!! | AAATAAATATATATTTTAGG+CGG | - | chr3_4:6887460-6887479 | None:intergenic | 10.0% |
!!! | TTAACTGAATAATTTTTATA+TGG | - | chr3_4:6887800-6887819 | None:intergenic | 10.0% |
!!! | TTTTTTTGTTAAATAATAGA+TGG | - | chr3_4:6887892-6887911 | None:intergenic | 10.0% |
!! | TACTTCTTAATTATTATATA+TGG | + | chr3_4:6888749-6888768 | Msa0487750:intron | 10.0% |
!! | AAGCATAAAATTATAAAACA+AGG | - | chr3_4:6882793-6882812 | None:intergenic | 15.0% |
!! | GAATACTATTCTATTTATTA+TGG | + | chr3_4:6883517-6883536 | Msa0487750:CDS | 15.0% |
!!! | AAATTTTTGAAGAAAAGTAA+GGG | - | chr3_4:6885247-6885266 | None:intergenic | 15.0% |
!!! | ATGTTTAAAATAAACCATAT+AGG | - | chr3_4:6886002-6886021 | None:intergenic | 15.0% |
!!! | TTTTTTCATCAACAAAAATA+TGG | + | chr3_4:6886287-6886306 | Msa0487750:intron | 15.0% |
!!! | ATATCTATCTCTTTTATAAT+GGG | - | chr3_4:6886414-6886433 | None:intergenic | 15.0% |
!!! | TATATCTATCTCTTTTATAA+TGG | - | chr3_4:6886415-6886434 | None:intergenic | 15.0% |
!!! | TTTTTATTTATTTTGAAGAG+GGG | + | chr3_4:6886606-6886625 | Msa0487750:intron | 15.0% |
!!! | GAAGTTTTTGTTTTTTTTTT+TGG | - | chr3_4:6886736-6886755 | None:intergenic | 15.0% |
!! | TATTAGAAACTGTATATATT+TGG | + | chr3_4:6886906-6886925 | Msa0487750:intron | 15.0% |
!! | GATAATCATTATTATATACA+GGG | + | chr3_4:6886982-6887001 | Msa0487750:intron | 15.0% |
!! | ATAATCATTATTATATACAG+GGG | + | chr3_4:6886983-6887002 | Msa0487750:intron | 15.0% |
!! | AAATGTTGAATTAATAATAG+AGG | - | chr3_4:6887533-6887552 | None:intergenic | 15.0% |
!!! | TAATTTTTATATGGAGTTTT+AGG | - | chr3_4:6887791-6887810 | None:intergenic | 15.0% |
!! | TCATCATTATATATTATGTT+TGG | + | chr3_4:6887932-6887951 | Msa0487750:intron | 15.0% |
!! | CATCATTATATATTATGTTT+GGG | + | chr3_4:6887933-6887952 | Msa0487750:intron | 15.0% |
!!! | ACTTTTTAACTATTTTTCAA+GGG | - | chr3_4:6888149-6888168 | None:intergenic | 15.0% |
!! | ATTAATTATTAGTGTATGTT+TGG | + | chr3_4:6888891-6888910 | Msa0487750:intron | 15.0% |
!!! | AAAATTTGATTTTGAAACTT+TGG | + | chr3_4:6888926-6888945 | Msa0487750:intron | 15.0% |
!! | ATCTAATCAAATATAAGATA+CGG | - | chr3_4:6889091-6889110 | None:intergenic | 15.0% |
!!! | AATCTTTTTATAAACTCATT+TGG | - | chr3_4:6889389-6889408 | None:intergenic | 15.0% |
!! | AATGAGTTTATAAAAAGATT+TGG | + | chr3_4:6889389-6889408 | Msa0487750:CDS | 15.0% |
!! | GAATACTATTCTATTTATTA+TGG | + | chr3_4:6883517-6883536 | Msa0487750:CDS | 15.0% |
!! | TATTTAGATTTCAAATATGA+AGG | + | chr3_4:6889554-6889573 | Msa0487750:intron | 15.0% |
!! | ATTTAGATTTCAAATATGAA+GGG | + | chr3_4:6889555-6889574 | Msa0487750:intron | 15.0% |
!!! | TTTTTTTATTCTTATCATCA+GGG | - | chr3_4:6890407-6890426 | None:intergenic | 15.0% |
!!! | ATTTTTTTATTCTTATCATC+AGG | - | chr3_4:6890408-6890427 | None:intergenic | 15.0% |
!! | TTATAGATAAAGCTAGAAAT+TGG | + | chr3_4:6882961-6882980 | Msa0487750:intron | 20.0% |
!! | ACGAGTTTATAAAAAGATAT+GGG | + | chr3_4:6883380-6883399 | Msa0487750:CDS | 20.0% |
!!! | TATTTAGATTTCAAGTATGA+AGG | + | chr3_4:6883544-6883563 | Msa0487750:intron | 20.0% |
!!! | ATTTAGATTTCAAGTATGAA+GGG | + | chr3_4:6883545-6883564 | Msa0487750:intron | 20.0% |
!! | TACGGTATGATTTATATTTA+TGG | + | chr3_4:6883793-6883812 | Msa0487750:intron | 20.0% |
!! | TACCTTTAAACATCAAATTA+GGG | + | chr3_4:6884730-6884749 | Msa0487750:intron | 20.0% |
!! | TCATCTGTTATACTATAATA+CGG | - | chr3_4:6884789-6884808 | None:intergenic | 20.0% |
!! | TATTGTATTTGATGTAACTT+CGG | + | chr3_4:6885040-6885059 | Msa0487750:intron | 20.0% |
!!! | GAAATTTTTGAAGAAAAGTA+AGG | - | chr3_4:6885248-6885267 | None:intergenic | 20.0% |
!!! | GAATTTTACTTTGTAGTTTT+TGG | + | chr3_4:6885288-6885307 | Msa0487750:intron | 20.0% |
!!! | TTGATATTTGATAATTTACC+TGG | + | chr3_4:6885698-6885717 | Msa0487750:intron | 20.0% |
!! | AACAATTATTAAGACTTGAT+AGG | + | chr3_4:6885955-6885974 | Msa0487750:intron | 20.0% |
!! | ACAATTATTAAGACTTGATA+GGG | + | chr3_4:6885956-6885975 | Msa0487750:intron | 20.0% |
!! | ATGAGAAGATTAAATATCAA+TGG | + | chr3_4:6886115-6886134 | Msa0487750:intron | 20.0% |
!!! | AAATTGAACTCACATTTTTA+TGG | - | chr3_4:6886176-6886195 | None:intergenic | 20.0% |
!!! | TTTAAGTGAATTATGTTTTG+GGG | - | chr3_4:6886261-6886280 | None:intergenic | 20.0% |
!!! | GTTTAAGTGAATTATGTTTT+GGG | - | chr3_4:6886262-6886281 | None:intergenic | 20.0% |
!!! | AGTTTAAGTGAATTATGTTT+TGG | - | chr3_4:6886263-6886282 | None:intergenic | 20.0% |
!!! | TATCTATCTCTTTTATAATG+GGG | - | chr3_4:6886413-6886432 | None:intergenic | 20.0% |
!! | GTTAAGATCTAATATATACA+TGG | - | chr3_4:6886527-6886546 | None:intergenic | 20.0% |
!!! | TTTCAAATTAGTCTCATTAA+TGG | + | chr3_4:6886559-6886578 | Msa0487750:intron | 20.0% |
!!! | GTTTTTGTTTTTTTTTTTGG+TGG | - | chr3_4:6886733-6886752 | None:intergenic | 20.0% |
!! | GTTTCTAATAAATTTGTGTA+TGG | - | chr3_4:6886896-6886915 | None:intergenic | 20.0% |
!! | GGATAATCATTATTATATAC+AGG | + | chr3_4:6886981-6887000 | Msa0487750:intron | 20.0% |
!! | TACTTGACAAAAAAAAAGTA+GGG | - | chr3_4:6887029-6887048 | None:intergenic | 20.0% |
!!! | ATATTACATTTTATATGCAG+AGG | - | chr3_4:6887118-6887137 | None:intergenic | 20.0% |
!!! | CTTTTTAAAGTGAATAAGTA+AGG | - | chr3_4:6887177-6887196 | None:intergenic | 20.0% |
!!! | TTTTTTTTTGTCTATTAACC+TGG | - | chr3_4:6887213-6887232 | None:intergenic | 20.0% |
!! | TGATGAATAAATGTGAAATT+TGG | - | chr3_4:6887861-6887880 | None:intergenic | 20.0% |
!! | ATTGAAAGTAAAAAAAGTAG+AGG | - | chr3_4:6888078-6888097 | None:intergenic | 20.0% |
!!! | CACTTTTTAACTATTTTTCA+AGG | - | chr3_4:6888150-6888169 | None:intergenic | 20.0% |
!! | TGAAAAATAGTTAAAAAGTG+TGG | + | chr3_4:6888150-6888169 | Msa0487750:intron | 20.0% |
!! | GAAATATTGTATATAAACGA+GGG | - | chr3_4:6888271-6888290 | None:intergenic | 20.0% |
!! | AAAATGTGATGATTTGATAT+AGG | - | chr3_4:6888329-6888348 | None:intergenic | 20.0% |
!! | TAGATTTAGAAAACAAGTTA+GGG | - | chr3_4:6888851-6888870 | None:intergenic | 20.0% |
!! | TTAGATTTAGAAAACAAGTT+AGG | - | chr3_4:6888852-6888871 | None:intergenic | 20.0% |
!! | GATATTATAAACCTACAAAT+TGG | + | chr3_4:6889016-6889035 | Msa0487750:intron | 20.0% |
!! | TAGACTTAACTTCATTATTA+AGG | - | chr3_4:6889116-6889135 | None:intergenic | 20.0% |
!!! | GGATTTTACTTTATAGTATT+TGG | + | chr3_4:6889774-6889793 | Msa0487750:intron | 20.0% |
!! | TGATTTACATTTATATGTTG+CGG | + | chr3_4:6889813-6889832 | Msa0487750:intron | 20.0% |
!! | GCAATAACTATTATCAATAA+AGG | - | chr3_4:6890199-6890218 | None:intergenic | 20.0% |
!! | ATGAGTTTATAACAAGATTT+GGG | + | chr3_4:6890768-6890787 | Msa0487750:CDS | 20.0% |
!!! | AACAAAAATAAGGGTTTTTT+GGG | - | chr3_4:6891171-6891190 | None:intergenic | 20.0% |
!!! | CGATTTTTGAACAAAAATAA+GGG | - | chr3_4:6891180-6891199 | None:intergenic | 20.0% |
!!! | GGATTTTACTTTATATCTTT+TGG | + | chr3_4:6891221-6891240 | Msa0487750:intron | 20.0% |
!!! | AAATGTTTTGAATCTTTCTC+CGG | - | chr3_4:6882587-6882606 | None:intergenic | 25.0% |
!!! | GTATAACTCTTTTAACTTTG+AGG | + | chr3_4:6882716-6882735 | Msa0487750:intron | 25.0% |
!!! | CTGTTATTTCTTATTATCGT+TGG | + | chr3_4:6882837-6882856 | Msa0487750:intron | 25.0% |
! | AGCATAAAAATCATGTTTGA+TGG | + | chr3_4:6883094-6883113 | Msa0487750:intron | 25.0% |
! | ATAAAAATCATGTTTGATGG+CGG | + | chr3_4:6883097-6883116 | Msa0487750:intron | 25.0% |
!! | TATCTTTTTATAAACTCGTC+TGG | - | chr3_4:6883379-6883398 | None:intergenic | 25.0% |
! | GACGAGTTTATAAAAAGATA+TGG | + | chr3_4:6883379-6883398 | Msa0487750:CDS | 25.0% |
!!! | TTAGTACTTGAAGTTTTGAA+TGG | - | chr3_4:6883625-6883644 | None:intergenic | 25.0% |
! | TTCAAAACTTCAAGTACTAA+TGG | + | chr3_4:6883625-6883644 | Msa0487750:CDS | 25.0% |
! | TAATGGTGAGAAAAACATAA+AGG | + | chr3_4:6883642-6883661 | Msa0487750:CDS | 25.0% |
! | AATGGTGAGAAAAACATAAA+GGG | + | chr3_4:6883643-6883662 | Msa0487750:CDS | 25.0% |
!!! | ATCGAAAATAAGGGTTTTTT+GGG | - | chr3_4:6883717-6883736 | None:intergenic | 25.0% |
!!! | CTTTCTGGTTTTTAAAGTTA+CGG | + | chr3_4:6883775-6883794 | Msa0487750:intron | 25.0% |
! | TATTGTGTATTGCATGAAAA+AGG | + | chr3_4:6883937-6883956 | Msa0487750:CDS | 25.0% |
! | AAGGGAAAACAATCTATTAA+AGG | + | chr3_4:6884002-6884021 | Msa0487750:CDS | 25.0% |
! | AGGGAAAACAATCTATTAAA+GGG | + | chr3_4:6884003-6884022 | Msa0487750:CDS | 25.0% |
!! | GTAAAAAAGCATATGTGATT+TGG | + | chr3_4:6884380-6884399 | Msa0487750:intron | 25.0% |
! | CTAAATTGAAAGGTAGTATT+TGG | - | chr3_4:6884615-6884634 | None:intergenic | 25.0% |
!!! | AGATTCAGTTCTAAATTGAA+AGG | - | chr3_4:6884625-6884644 | None:intergenic | 25.0% |
!! | TTCAATTTAGAACTGAATCT+AGG | + | chr3_4:6884625-6884644 | Msa0487750:intron | 25.0% |
!!! | GTTTAAAGGTAGTTTTTCAA+GGG | - | chr3_4:6884721-6884740 | None:intergenic | 25.0% |
!! | TGTTTAAAGGTAGTTTTTCA+AGG | - | chr3_4:6884722-6884741 | None:intergenic | 25.0% |
! | CTACCTTTAAACATCAAATT+AGG | + | chr3_4:6884729-6884748 | Msa0487750:intron | 25.0% |
! | TTCCCTAATTTGATGTTTAA+AGG | - | chr3_4:6884735-6884754 | None:intergenic | 25.0% |
! | ATGAGTTCATAACAAGATTT+GGG | + | chr3_4:6884835-6884854 | Msa0487750:CDS | 25.0% |
!! | ACATTTTCTTTTACAACGAA+TGG | + | chr3_4:6884937-6884956 | Msa0487750:CDS | 25.0% |
! | TTTGCAAATTACTATTCGTT+AGG | + | chr3_4:6884966-6884985 | Msa0487750:CDS | 25.0% |
! | AATTACTATTCGTTAGGATA+TGG | + | chr3_4:6884972-6884991 | Msa0487750:CDS | 25.0% |
! | TTTCTGTCTTTCAAATATGA+AGG | + | chr3_4:6884999-6885018 | Msa0487750:CDS | 25.0% |
! | TTCTGTCTTTCAAATATGAA+GGG | + | chr3_4:6885000-6885019 | Msa0487750:CDS | 25.0% |
!!! | TTAGTACTTAGATTTTTGAG+TGG | - | chr3_4:6885080-6885099 | None:intergenic | 25.0% |
! | CTCAAAAATCTAAGTACTAA+TGG | + | chr3_4:6885080-6885099 | Msa0487750:CDS | 25.0% |
!!! | GTTTTTTGGATTGAATTCAT+TGG | - | chr3_4:6885225-6885244 | None:intergenic | 25.0% |
! | ATTTGCATTGAGAATGAATT+GGG | - | chr3_4:6885481-6885500 | None:intergenic | 25.0% |
! | TATTTGCATTGAGAATGAAT+TGG | - | chr3_4:6885482-6885501 | None:intergenic | 25.0% |
! | ATTCTCAATGCAAATAACAA+GGG | + | chr3_4:6885486-6885505 | Msa0487750:CDS | 25.0% |
! | TTTCCTTTGTATTGCTTTAA+TGG | + | chr3_4:6885753-6885772 | Msa0487750:intron | 25.0% |
! | TTCCTTTGTATTGCTTTAAT+GGG | + | chr3_4:6885754-6885773 | Msa0487750:intron | 25.0% |
! | CAATTATTAAGACTTGATAG+GGG | + | chr3_4:6885957-6885976 | Msa0487750:intron | 25.0% |
! | CAATAGTAAACATACCTATA+TGG | + | chr3_4:6885985-6886004 | Msa0487750:intron | 25.0% |
! | AAGGTGATTGAAAATTAAGA+AGG | + | chr3_4:6886092-6886111 | Msa0487750:intron | 25.0% |
! | ATTTGTAACACTAAATTCAG+TGG | + | chr3_4:6886471-6886490 | Msa0487750:intron | 25.0% |
! | AGATCTAATATATACATGGT+AGG | - | chr3_4:6886523-6886542 | None:intergenic | 25.0% |
!!! | TTGTTTTTTTTTTTGGTGGT+CGG | - | chr3_4:6886729-6886748 | None:intergenic | 25.0% |
! | ATACACGCTAATAAATTAGA+AGG | - | chr3_4:6886873-6886892 | None:intergenic | 25.0% |
! | GAAACTGTATATATTTGGAT+TGG | + | chr3_4:6886911-6886930 | Msa0487750:intron | 25.0% |
!! | TGGATTGGATTAATATTCTA+TGG | + | chr3_4:6886926-6886945 | Msa0487750:intron | 25.0% |
! | CTACTTGACAAAAAAAAAGT+AGG | - | chr3_4:6887030-6887049 | None:intergenic | 25.0% |
!!! | AATTTTGATGTGAGTATTGT+TGG | + | chr3_4:6887368-6887387 | Msa0487750:intron | 25.0% |
!!! | ATTTTGATGTGAGTATTGTT+GGG | + | chr3_4:6887369-6887388 | Msa0487750:intron | 25.0% |
!! | ACCTAATGTCTTTATGTTTT+AGG | - | chr3_4:6887500-6887519 | None:intergenic | 25.0% |
! | TTACTCATTCATATATGATG+TGG | + | chr3_4:6887552-6887571 | Msa0487750:intron | 25.0% |
! | TACTCATTCATATATGATGT+GGG | + | chr3_4:6887553-6887572 | Msa0487750:intron | 25.0% |
!!! | TTTTTATATGGAGTTTTAGG+TGG | - | chr3_4:6887788-6887807 | None:intergenic | 25.0% |
!!! | GAAATTTGGAGTTTGAATTT+TGG | - | chr3_4:6887847-6887866 | None:intergenic | 25.0% |
! | AAACGAAACTGAGTATAAAA+AGG | - | chr3_4:6888025-6888044 | None:intergenic | 25.0% |
! | GGAAATATTGTATATAAACG+AGG | - | chr3_4:6888272-6888291 | None:intergenic | 25.0% |
! | AAACAAATGAAGCATAAGAA+TGG | - | chr3_4:6888293-6888312 | None:intergenic | 25.0% |
! | TAATAGAGATGTAAAAGTGA+GGG | - | chr3_4:6888453-6888472 | None:intergenic | 25.0% |
! | TTAATAGAGATGTAAAAGTG+AGG | - | chr3_4:6888454-6888473 | None:intergenic | 25.0% |
!!! | ACTATTTCTTTTGTATGATC+TGG | - | chr3_4:6888640-6888659 | None:intergenic | 25.0% |
!! | AGTCTAAAAATCATGTTTTG+AGG | + | chr3_4:6889130-6889149 | Msa0487750:intron | 25.0% |
! | ATCAATCAAACTTCAAAAGA+GGG | - | chr3_4:6889322-6889341 | None:intergenic | 25.0% |
! | CTAATCAGTTATACTACTAT+AGG | - | chr3_4:6889345-6889364 | None:intergenic | 25.0% |
!!! | AACGAAAAGAAGTGTTTTTT+GGG | - | chr3_4:6889727-6889746 | None:intergenic | 25.0% |
! | TGTAAAAAACTTCCTTTGAT+AGG | - | chr3_4:6890032-6890051 | None:intergenic | 25.0% |
!! | TCTTTTAATATCTGAACTGT+TGG | + | chr3_4:6890162-6890181 | Msa0487750:intron | 25.0% |
! | GCATTAAAAATATTCAGCTT+TGG | + | chr3_4:6890446-6890465 | Msa0487750:intron | 25.0% |
! | ACTACTTCAAAACATCAAAT+TGG | + | chr3_4:6890661-6890680 | Msa0487750:intron | 25.0% |
! | CTACTTCAAAACATCAAATT+GGG | + | chr3_4:6890662-6890681 | Msa0487750:intron | 25.0% |
! | TACTTCAAAACATCAAATTG+GGG | + | chr3_4:6890663-6890682 | Msa0487750:intron | 25.0% |
! | CTATAATACCAAACTTCAAA+AGG | - | chr3_4:6890710-6890729 | None:intergenic | 25.0% |
!! | AATCTTGTTATAAACTCATC+TGG | - | chr3_4:6890767-6890786 | None:intergenic | 25.0% |
! | GATGAGTTTATAACAAGATT+TGG | + | chr3_4:6890767-6890786 | Msa0487750:CDS | 25.0% |
! | TTTGCAAAATACTATTCGTT+AGG | + | chr3_4:6890899-6890918 | Msa0487750:CDS | 25.0% |
! | AAATACTATTCGTTAGGATA+TGG | + | chr3_4:6890905-6890924 | Msa0487750:CDS | 25.0% |
! | TACCTATCTTTCAAATACAA+AGG | + | chr3_4:6890932-6890951 | Msa0487750:CDS | 25.0% |
! | ACCTATCTTTCAAATACAAA+GGG | + | chr3_4:6890933-6890952 | Msa0487750:CDS | 25.0% |
!!! | GAACAAAAATAAGGGTTTTT+TGG | - | chr3_4:6891172-6891191 | None:intergenic | 25.0% |
!! | GCGATTTTTGAACAAAAATA+AGG | - | chr3_4:6891181-6891200 | None:intergenic | 25.0% |
!! | GGGATTTCCTAATTTTATAA+CGG | + | chr3_4:6891441-6891460 | Msa0487750:CDS | 25.0% |
! | TTGTTGTCCGTTATAAAATT+AGG | - | chr3_4:6891451-6891470 | None:intergenic | 25.0% |
!! | ACTATTTCTTTTGTGTGATC+TGG | - | chr3_4:6882632-6882651 | None:intergenic | 30.0% |
!!! | TCGTTGGTTGTTTTTATGTT+TGG | + | chr3_4:6882853-6882872 | Msa0487750:intron | 30.0% |
! | ATGTTTGGAATCATTGTTGT+GGG | - | chr3_4:6883224-6883243 | None:intergenic | 30.0% |
ATCAATCAAACTTCAAAGGA+GGG | - | chr3_4:6883312-6883331 | None:intergenic | 30.0% | |
TAGGATCAATCAAACTTCAA+AGG | - | chr3_4:6883316-6883335 | None:intergenic | 30.0% | |
CTCATCAGTTATACTACTAT+AGG | - | chr3_4:6883335-6883354 | None:intergenic | 30.0% | |
! | ATGTTTTCCTTAGCAACAAT+TGG | + | chr3_4:6883482-6883501 | Msa0487750:CDS | 30.0% |
!!! | GATCGAAAATAAGGGTTTTT+TGG | - | chr3_4:6883718-6883737 | None:intergenic | 30.0% |
!! | CGGATTTTGATCGAAAATAA+GGG | - | chr3_4:6883726-6883745 | None:intergenic | 30.0% |
!! | ACGGATTTTGATCGAAAATA+AGG | - | chr3_4:6883727-6883746 | None:intergenic | 30.0% |
! | TACTTTTCAGCAAAACTAGA+AGG | - | chr3_4:6883859-6883878 | None:intergenic | 30.0% |
! | TGGATTTGGTAAATTTGCAA+GGG | + | chr3_4:6883984-6884003 | Msa0487750:CDS | 30.0% |
TTATGCATTAAGTTCACCAA+CGG | - | chr3_4:6884169-6884188 | None:intergenic | 30.0% | |
AATGACAGAAAAGGAAGTAA+GGG | + | chr3_4:6884247-6884266 | Msa0487750:CDS | 30.0% | |
!! | GGAATCGAAACATTTTAAGA+AGG | + | chr3_4:6884268-6884287 | Msa0487750:CDS | 30.0% |
ACTATCTCTTTGTCATGAAT+GGG | - | chr3_4:6884308-6884327 | None:intergenic | 30.0% | |
TACTATCTCTTTGTCATGAA+TGG | - | chr3_4:6884309-6884328 | None:intergenic | 30.0% | |
!!! | CATATGTGATTTGGTTTTGA+AGG | + | chr3_4:6884389-6884408 | Msa0487750:intron | 30.0% |
AGCATGAAAATATTCAGCTT+TGG | + | chr3_4:6884514-6884533 | Msa0487750:intron | 30.0% | |
ATTTGTCTATGTCTCTGATT+TGG | + | chr3_4:6884537-6884556 | Msa0487750:intron | 30.0% | |
CTAGACACATACATTTGATT+TGG | - | chr3_4:6884686-6884705 | None:intergenic | 30.0% | |
CTATAATACGGAACTTCAAA+AGG | - | chr3_4:6884777-6884796 | None:intergenic | 30.0% | |
! | AATCTTGTTATGAACTCATC+TGG | - | chr3_4:6884834-6884853 | None:intergenic | 30.0% |
GATGAGTTCATAACAAGATT+TGG | + | chr3_4:6884834-6884853 | Msa0487750:CDS | 30.0% | |
TACTTCTATGAAAAGTTCCA+GGG | + | chr3_4:6885124-6885143 | Msa0487750:CDS | 30.0% | |
!!! | GAAGAAAAGTAAGGGTTTTT+TGG | - | chr3_4:6885239-6885258 | None:intergenic | 30.0% |
AATTTCTAAGCGAAATCTTG+TGG | + | chr3_4:6885262-6885281 | Msa0487750:CDS | 30.0% | |
! | AATGCTTTCCTTGAGAATTT+TGG | - | chr3_4:6885432-6885451 | None:intergenic | 30.0% |
! | AAAATTCTCAAGGAAAGCAT+TGG | + | chr3_4:6885431-6885450 | Msa0487750:CDS | 30.0% |
CATTCTCAATGCAAATAACA+AGG | + | chr3_4:6885485-6885504 | Msa0487750:CDS | 30.0% | |
TTCTCAATGCAAATAACAAG+GGG | + | chr3_4:6885487-6885506 | Msa0487750:CDS | 30.0% | |
! | GGGATTTTCGAAATTTCTAA+AGG | + | chr3_4:6885507-6885526 | Msa0487750:CDS | 30.0% |
!! | TTGTGTATTTGAGTTGATCA+AGG | + | chr3_4:6885555-6885574 | Msa0487750:CDS | 30.0% |
AATACATAAGAGCCTATTAC+TGG | - | chr3_4:6885734-6885753 | None:intergenic | 30.0% | |
ATCCCATTAAAGCAATACAA+AGG | - | chr3_4:6885759-6885778 | None:intergenic | 30.0% | |
! | TTGCTTTAATGGGATGTTTT+TGG | + | chr3_4:6885764-6885783 | Msa0487750:intron | 30.0% |
! | GGAGATTGATTCAATTGTTA+AGG | + | chr3_4:6886136-6886155 | Msa0487750:intron | 30.0% |
! | AGTTCAATTTTCATTGTCGA+TGG | + | chr3_4:6886186-6886205 | Msa0487750:intron | 30.0% |
! | GTTCAATTTTCATTGTCGAT+GGG | + | chr3_4:6886187-6886206 | Msa0487750:intron | 30.0% |
!!! | GCTTTTTTTTGTTGACACAA+TGG | - | chr3_4:6886332-6886351 | None:intergenic | 30.0% |
! | ATAGTGAAGTTTTTGCTTGT+TGG | - | chr3_4:6886639-6886658 | None:intergenic | 30.0% |
GACAATGCATAATATATGCA+AGG | + | chr3_4:6886688-6886707 | Msa0487750:intron | 30.0% | |
!!! | TGTTTTTTTTTTTGGTGGTC+GGG | - | chr3_4:6886728-6886747 | None:intergenic | 30.0% |
!! | AAAAAAAAAGTAGGGTGTTG+GGG | - | chr3_4:6887021-6887040 | None:intergenic | 30.0% |
! | CAAAAAAAAAGTAGGGTGTT+GGG | - | chr3_4:6887022-6887041 | None:intergenic | 30.0% |
ACAAAAAAAAAGTAGGGTGT+TGG | - | chr3_4:6887023-6887042 | None:intergenic | 30.0% | |
ACAATTTAATTGTGGAGAAG+TGG | + | chr3_4:6887069-6887088 | Msa0487750:intron | 30.0% | |
! | AAGTGAATAAGTAAGGTGTT+GGG | - | chr3_4:6887170-6887189 | None:intergenic | 30.0% |
AAAGTGAATAAGTAAGGTGT+TGG | - | chr3_4:6887171-6887190 | None:intergenic | 30.0% | |
!!! | TTTTTTGTCTATTAACCTGG+TGG | - | chr3_4:6887210-6887229 | None:intergenic | 30.0% |
!! | TTTTGATGTGAGTATTGTTG+GGG | + | chr3_4:6887370-6887389 | Msa0487750:intron | 30.0% |
GCCTAAAACATAAAGACATT+AGG | + | chr3_4:6887496-6887515 | Msa0487750:intron | 30.0% | |
GAAACTGAGTATAAAAAGGA+GGG | - | chr3_4:6888021-6888040 | None:intergenic | 30.0% | |
TTCTTTCTCTAACTTCTGAT+TGG | + | chr3_4:6888117-6888136 | Msa0487750:intron | 30.0% | |
!!! | TAACTATTTTTCAAGGGATC+AGG | - | chr3_4:6888143-6888162 | None:intergenic | 30.0% |
ACTAACACAAACACAAACAT+AGG | - | chr3_4:6888360-6888379 | None:intergenic | 30.0% | |
TTAACAATACTCTCAACTCA+AGG | + | chr3_4:6888470-6888489 | Msa0487750:intron | 30.0% | |
! | ATTTCTTTTGTATGATCTGG+AGG | - | chr3_4:6888637-6888656 | None:intergenic | 30.0% |
! | ATGTTTGGACTAATTTTTGC+AGG | - | chr3_4:6889234-6889253 | None:intergenic | 30.0% |
TCAATCAAACTTCAAAAGAG+GGG | - | chr3_4:6889321-6889340 | None:intergenic | 30.0% | |
GATCAATCAAACTTCAAAAG+AGG | - | chr3_4:6889323-6889342 | None:intergenic | 30.0% | |
! | ATGTTTTCCTTAGCAACAAT+TGG | + | chr3_4:6883482-6883501 | Msa0487750:CDS | 30.0% |
TTTCTTATCCATTCCAAACT+CGG | + | chr3_4:6889624-6889643 | Msa0487750:CDS | 30.0% | |
!!! | GAACGAAAAGAAGTGTTTTT+TGG | - | chr3_4:6889728-6889747 | None:intergenic | 30.0% |
!!! | TGATAATTTTGGAGCATGAA+CGG | - | chr3_4:6889913-6889932 | None:intergenic | 30.0% |
TTCATGCTCCAAAATTATCA+AGG | + | chr3_4:6889913-6889932 | Msa0487750:CDS | 30.0% | |
!! | ACTGCTTTCCTTGATAATTT+TGG | - | chr3_4:6889924-6889943 | None:intergenic | 30.0% |
AAAATTATCAAGGAAAGCAG+TGG | + | chr3_4:6889923-6889942 | Msa0487750:CDS | 30.0% | |
AAATTATCAAGGAAAGCAGT+GGG | + | chr3_4:6889924-6889943 | Msa0487750:CDS | 30.0% | |
TGGATTCTATAGATTTGGAA+GGG | + | chr3_4:6889999-6890018 | Msa0487750:CDS | 30.0% | |
AATGACAGAAAAGGAAGTTA+GGG | + | chr3_4:6890259-6890278 | Msa0487750:CDS | 30.0% | |
ACTATCTCTTTGTCATGAAT+GGG | - | chr3_4:6884308-6884327 | None:intergenic | 30.0% | |
TACTATCTCTTTGTCATGAA+TGG | - | chr3_4:6884309-6884328 | None:intergenic | 30.0% | |
CTAGACACCAATATTTGATT+TGG | - | chr3_4:6890619-6890638 | None:intergenic | 30.0% | |
AATACCAAACTTCAAAAGGA+GGG | - | chr3_4:6890706-6890725 | None:intergenic | 30.0% | |
TAATACCAAACTTCAAAAGG+AGG | - | chr3_4:6890707-6890726 | None:intergenic | 30.0% | |
AAAATGAGATTGAAGAAACG+CGG | + | chr3_4:6884909-6884928 | Msa0487750:CDS | 30.0% | |
! | ACATTTTCTTTTGCAACGAA+TGG | + | chr3_4:6890870-6890889 | Msa0487750:CDS | 30.0% |
TCCCTTTGTATTTGAAAGAT+AGG | - | chr3_4:6890937-6890956 | None:intergenic | 30.0% | |
!!! | GTAACACTTGAAGTTTTGAA+TGG | - | chr3_4:6891013-6891032 | None:intergenic | 30.0% |
TTCAAAACTTCAAGTGTTAC+TGG | + | chr3_4:6891013-6891032 | Msa0487750:CDS | 30.0% | |
!!! | GTTTTTTGGGTTGAATTCAT+TGG | - | chr3_4:6891158-6891177 | None:intergenic | 30.0% |
AATGGATGAGATCAATTTAG+TGG | - | chr3_4:6891281-6891300 | None:intergenic | 30.0% | |
! | ACTGTTTTCCATCAGAATTT+TGG | - | chr3_4:6891366-6891385 | None:intergenic | 30.0% |
AAAATTCTGATGGAAAACAG+TGG | + | chr3_4:6891365-6891384 | Msa0487750:CDS | 30.0% | |
AAATTCTGATGGAAAACAGT+GGG | + | chr3_4:6891366-6891385 | Msa0487750:CDS | 30.0% | |
! | TTTCTTTTGTGTGATCTGGA+GGG | - | chr3_4:6882628-6882647 | None:intergenic | 35.0% |
! | ATTTCTTTTGTGTGATCTGG+AGG | - | chr3_4:6882629-6882648 | None:intergenic | 35.0% |
! | CTACACACAGTTTAGTTTAC+AGG | - | chr3_4:6882768-6882787 | None:intergenic | 35.0% |
CGAAATTGATTGACACGTTT+AGG | - | chr3_4:6883180-6883199 | None:intergenic | 35.0% | |
! | CATGTTTGGAATCATTGTTG+TGG | - | chr3_4:6883225-6883244 | None:intergenic | 35.0% |
GTCTCAGTTAAGTACATGTT+TGG | - | chr3_4:6883239-6883258 | None:intergenic | 35.0% | |
TTAACTGAGACTCTGAATGA+GGG | + | chr3_4:6883248-6883267 | Msa0487750:intron | 35.0% | |
TCAATCAAACTTCAAAGGAG+GGG | - | chr3_4:6883311-6883330 | None:intergenic | 35.0% | |
GATCAATCAAACTTCAAAGG+AGG | - | chr3_4:6883313-6883332 | None:intergenic | 35.0% | |
!!! | GTTTTTTGGGTTGAATTCAC+TGG | - | chr3_4:6883704-6883723 | None:intergenic | 35.0% |
! | ATTTTCGATCAAAATCCGTC+AGG | + | chr3_4:6883728-6883747 | Msa0487750:CDS | 35.0% |
! | TTTTCGATCAAAATCCGTCA+GGG | + | chr3_4:6883729-6883748 | Msa0487750:CDS | 35.0% |
! | GCAGTAAGGATTTTACTTTC+TGG | + | chr3_4:6883760-6883779 | Msa0487750:intron | 35.0% |
!! | TGAAAAGTATCTGACCCTAA+AGG | + | chr3_4:6883870-6883889 | Msa0487750:CDS | 35.0% |
!!! | TGTGAATTTTGGAGCTTGAA+CGG | - | chr3_4:6883898-6883917 | None:intergenic | 35.0% |
TTCAAGCTCCAAAATTCACA+AGG | + | chr3_4:6883898-6883917 | Msa0487750:CDS | 35.0% | |
! | ACTGCTTTCCTTGTGAATTT+TGG | - | chr3_4:6883909-6883928 | None:intergenic | 35.0% |
AAAATTCACAAGGAAAGCAG+TGG | + | chr3_4:6883908-6883927 | Msa0487750:CDS | 35.0% | |
AAATTCACAAGGAAAGCAGT+GGG | + | chr3_4:6883909-6883928 | Msa0487750:CDS | 35.0% | |
AAGATCACACATGCGAATAA+CGG | + | chr3_4:6883960-6883979 | Msa0487750:CDS | 35.0% | |
! | GTGGATTTGGTAAATTTGCA+AGG | + | chr3_4:6883983-6884002 | Msa0487750:CDS | 35.0% |
! | TCTTTTAATGTCTGAACCGT+TGG | + | chr3_4:6884150-6884169 | Msa0487750:intron | 35.0% |
!! | TTCCTTTTCTGTCATTGACT+GGG | - | chr3_4:6884243-6884262 | None:intergenic | 35.0% |
CAATGACAGAAAAGGAAGTA+AGG | + | chr3_4:6884246-6884265 | Msa0487750:CDS | 35.0% | |
ACAGTAACTCACAACAGAAA+GGG | - | chr3_4:6884337-6884356 | None:intergenic | 35.0% | |
AATACGGAACTTCAAAAGGA+GGG | - | chr3_4:6884773-6884792 | None:intergenic | 35.0% | |
TAATACGGAACTTCAAAAGG+AGG | - | chr3_4:6884774-6884793 | None:intergenic | 35.0% | |
! | CTGGAACTTTTCATAGAAGT+AGG | - | chr3_4:6885125-6885144 | None:intergenic | 35.0% |
CTACTTCTATGAAAAGTTCC+AGG | + | chr3_4:6885123-6885142 | Msa0487750:CDS | 35.0% | |
AATAATCTCCATGTGTCAGA+TGG | - | chr3_4:6885537-6885556 | None:intergenic | 35.0% | |
! | ATTGTGACTTTTAGCACAAC+CGG | - | chr3_4:6885586-6885605 | None:intergenic | 35.0% |
AAAAGTCACAATGTTTCGTG+CGG | + | chr3_4:6885594-6885613 | Msa0487750:intron | 35.0% | |
!!! | AATGGGATGTTTTTGGCTTT+TGG | + | chr3_4:6885771-6885790 | Msa0487750:intron | 35.0% |
TCTTTAGATATGTCCTAGAG+AGG | + | chr3_4:6886235-6886254 | Msa0487750:intron | 35.0% | |
! | TTTTGTTGACACAATGGTAG+TGG | - | chr3_4:6886326-6886345 | None:intergenic | 35.0% |
!!! | TTTATTTTGAAGAGGGGCAA+AGG | + | chr3_4:6886612-6886631 | Msa0487750:intron | 35.0% |
TGCATAATATATGCAAGGTC+AGG | + | chr3_4:6886693-6886712 | Msa0487750:intron | 35.0% | |
!!! | GTTTTTTTTTTTGGTGGTCG+GGG | - | chr3_4:6886727-6886746 | None:intergenic | 35.0% |
!! | TTTGCTGCAGGATGTTTTAA+GGG | - | chr3_4:6886787-6886806 | None:intergenic | 35.0% |
! | TTTTGCTGCAGGATGTTTTA+AGG | - | chr3_4:6886788-6886807 | None:intergenic | 35.0% |
ATAGAGGAACATGCTAAACT+TGG | + | chr3_4:6886822-6886841 | Msa0487750:intron | 35.0% | |
!!! | TTTTTTGTCAAGTAGCCTAG+TGG | + | chr3_4:6887035-6887054 | Msa0487750:intron | 35.0% |
GAGCTCACACAATTTAATTG+TGG | + | chr3_4:6887061-6887080 | Msa0487750:intron | 35.0% | |
!! | AGTGAATAAGTAAGGTGTTG+GGG | - | chr3_4:6887169-6887188 | None:intergenic | 35.0% |
!! | ATATATTTTAGGCGGAGATG+TGG | - | chr3_4:6887452-6887471 | None:intergenic | 35.0% |
!! | GAGCATGAATGGATTGTTAT+GGG | - | chr3_4:6887639-6887658 | None:intergenic | 35.0% |
!! | AGAGCATGAATGGATTGTTA+TGG | - | chr3_4:6887640-6887659 | None:intergenic | 35.0% |
! | GGCTTTGATACCATTTGTTA+GGG | + | chr3_4:6887678-6887697 | Msa0487750:intron | 35.0% |
CGAAACTGAGTATAAAAAGG+AGG | - | chr3_4:6888022-6888041 | None:intergenic | 35.0% | |
ATTCTCTTTCTACGAGTACT+AGG | - | chr3_4:6888176-6888195 | None:intergenic | 35.0% | |
AGGGAAGAAGAAAAAAGGTA+GGG | - | chr3_4:6888252-6888271 | None:intergenic | 35.0% | |
AAACGAGGGAAGAAGAAAAA+AGG | - | chr3_4:6888257-6888276 | None:intergenic | 35.0% | |
AAGAAACAATGAAGACTCAC+CGG | + | chr3_4:6888551-6888570 | Msa0487750:CDS | 35.0% | |
!! | AAGTGTTTTGAATCCTTCTC+CGG | - | chr3_4:6888595-6888614 | None:intergenic | 35.0% |
ACTCTAACTGTCAAACTTTG+AGG | + | chr3_4:6888707-6888726 | Msa0487750:intron | 35.0% | |
GCTTAAGCTAAGTACATGTT+TGG | - | chr3_4:6889249-6889268 | None:intergenic | 35.0% | |
!!! | GTTTTTTGGGTTGATTCCAT+TGG | - | chr3_4:6889714-6889733 | None:intergenic | 35.0% |
!!! | ATTCGCATTGCTGATTTTCT+TGG | - | chr3_4:6889973-6889992 | None:intergenic | 35.0% |
! | ACGAGTGGATTCTATAGATT+TGG | + | chr3_4:6889994-6890013 | Msa0487750:CDS | 35.0% |
GTGGATTCTATAGATTTGGA+AGG | + | chr3_4:6889998-6890017 | Msa0487750:CDS | 35.0% | |
AAGGGAAAACAACCTATCAA+AGG | + | chr3_4:6890017-6890036 | Msa0487750:CDS | 35.0% | |
!! | TTCCTTTTCTGTCATTGACT+GGG | - | chr3_4:6884243-6884262 | None:intergenic | 35.0% |
CAATGACAGAAAAGGAAGTT+AGG | + | chr3_4:6890258-6890277 | Msa0487750:CDS | 35.0% | |
GGAATCCAAACATTTCAAGA+AGG | + | chr3_4:6890280-6890299 | Msa0487750:CDS | 35.0% | |
TATGGCCTTCTTGAAATGTT+TGG | - | chr3_4:6890288-6890307 | None:intergenic | 35.0% | |
TTGTCAATGTCTCTGTGATT+TGG | + | chr3_4:6890471-6890490 | Msa0487750:intron | 35.0% | |
! | AAACTGTGTCATTGGATTGT+TGG | + | chr3_4:6890512-6890531 | Msa0487750:intron | 35.0% |
TCTAACTTGGAGGTTGTATT+TGG | - | chr3_4:6890549-6890568 | None:intergenic | 35.0% | |
! | TAGTTTCAGTTCTAACTTGG+AGG | - | chr3_4:6890559-6890578 | None:intergenic | 35.0% |
TCCAAGTTAGAACTGAAACT+AGG | + | chr3_4:6890558-6890577 | Msa0487750:intron | 35.0% | |
GACGTGTCCAAATCAAATAT+TGG | + | chr3_4:6890609-6890628 | Msa0487750:intron | 35.0% | |
TTGAAACAAGTGAGTGTCAT+GGG | + | chr3_4:6891080-6891099 | Msa0487750:CDS | 35.0% | |
TACTTCACAGCAAAATCACA+AGG | - | chr3_4:6891316-6891335 | None:intergenic | 35.0% | |
!!! | TCAGAATTTTGGAGCTTTGT+AGG | - | chr3_4:6891355-6891374 | None:intergenic | 35.0% |
ACAAAGCTCCAAAATTCTGA+TGG | + | chr3_4:6891355-6891374 | Msa0487750:CDS | 35.0% | |
! | TTCTTTTGTGTGATCTGGAG+GGG | - | chr3_4:6882627-6882646 | None:intergenic | 40.0% |
! | CACAGTTTAGTTTACAGGAG+AGG | - | chr3_4:6882763-6882782 | None:intergenic | 40.0% |
! | TTTGGAATCATTGTTGTGGG+AGG | - | chr3_4:6883221-6883240 | None:intergenic | 40.0% |
CTTAACTGAGACTCTGAATG+AGG | + | chr3_4:6883247-6883266 | Msa0487750:intron | 40.0% | |
GAAATGGGACTGAAGAAATG+TGG | + | chr3_4:6883454-6883473 | Msa0487750:CDS | 40.0% | |
ACTGTTGCCAATTGTTGCTA+AGG | - | chr3_4:6883492-6883511 | None:intergenic | 40.0% | |
TTTCGATCAAAATCCGTCAG+GGG | + | chr3_4:6883730-6883749 | Msa0487750:CDS | 40.0% | |
AGAAGGAACATACTGCACAA+TGG | - | chr3_4:6883842-6883861 | None:intergenic | 40.0% | |
AGATCACACATGCGAATAAC+GGG | + | chr3_4:6883961-6883980 | Msa0487750:CDS | 40.0% | |
ATGTGTTTGAGCTGATCAAG+AGG | + | chr3_4:6884034-6884053 | Msa0487750:CDS | 40.0% | |
GCTGTAACAAGTAGTACAAC+AGG | - | chr3_4:6884063-6884082 | None:intergenic | 40.0% | |
! | ACTTGTTACAGCGATTTGCA+CGG | + | chr3_4:6884071-6884090 | Msa0487750:CDS | 40.0% |
! | CTTCCTTTTCTGTCATTGAC+TGG | - | chr3_4:6884244-6884263 | None:intergenic | 40.0% |
GACAGTAACTCACAACAGAA+AGG | - | chr3_4:6884338-6884357 | None:intergenic | 40.0% | |
ATAACTCGAAACTGTGACGT+TGG | + | chr3_4:6884414-6884433 | Msa0487750:intron | 40.0% | |
AAAGGAGGGTAACATGTTTG+AGG | - | chr3_4:6884759-6884778 | None:intergenic | 40.0% | |
! | ATTTTCCAATCACGACCATC+GGG | - | chr3_4:6884894-6884913 | None:intergenic | 40.0% |
! | CATTTTCCAATCACGACCAT+CGG | - | chr3_4:6884895-6884914 | None:intergenic | 40.0% |
TTGAAACAAGTGGCAGTCAA+GGG | + | chr3_4:6885147-6885166 | Msa0487750:CDS | 40.0% | |
! | ACATGCCTTTAAAAGTGCAG+AGG | + | chr3_4:6885193-6885212 | Msa0487750:CDS | 40.0% |
! | AGCATCCTCTGCACTTTTAA+AGG | - | chr3_4:6885201-6885220 | None:intergenic | 40.0% |
!!! | TGAGAATTTTGGAGTGCGAT+TGG | - | chr3_4:6885421-6885440 | None:intergenic | 40.0% |
ATCGCACTCCAAAATTCTCA+AGG | + | chr3_4:6885421-6885440 | Msa0487750:CDS | 40.0% | |
! | ATTACTGGTTGATGCAATCC+AGG | - | chr3_4:6885719-6885738 | None:intergenic | 40.0% |
GGATTGCATCAACCAGTAAT+AGG | + | chr3_4:6885719-6885738 | Msa0487750:intron | 40.0% | |
AATTCATCAAGCTGCTGGTA+AGG | - | chr3_4:6885824-6885843 | None:intergenic | 40.0% | |
ACTAGACCTTCTACATGGTT+GGG | + | chr3_4:6885849-6885868 | Msa0487750:intron | 40.0% | |
!! | GGAAGTGTCTCTGAGTTAAT+AGG | + | chr3_4:6885893-6885912 | Msa0487750:intron | 40.0% |
TTGCCAATGTGTGTCAATTG+TGG | + | chr3_4:6885919-6885938 | Msa0487750:intron | 40.0% | |
TGCCAATGTGTGTCAATTGT+GGG | + | chr3_4:6885920-6885939 | Msa0487750:intron | 40.0% | |
! | TAAGCTTAGCTCAGTTGGTA+AGG | + | chr3_4:6886666-6886685 | Msa0487750:intron | 40.0% |
!!! | TGCAGGATGTTTTAAGGGTT+TGG | - | chr3_4:6886782-6886801 | None:intergenic | 40.0% |
AAGCACAGGAAACAAGATAG+AGG | + | chr3_4:6886806-6886825 | Msa0487750:intron | 40.0% | |
ATTATTATATACAGGGGCCG+AGG | + | chr3_4:6886989-6887008 | Msa0487750:intron | 40.0% | |
! | CATTTTATATGCAGAGGCCA+TGG | - | chr3_4:6887112-6887131 | None:intergenic | 40.0% |
! | AAAAGTGACTTTTAGCCACC+AGG | + | chr3_4:6887192-6887211 | Msa0487750:intron | 40.0% |
! | GGATTTTGCAAGACAACATG+AGG | + | chr3_4:6887247-6887266 | Msa0487750:intron | 40.0% |
TATAGTGAGCTTAGCTCAGT+TGG | + | chr3_4:6887270-6887289 | Msa0487750:intron | 40.0% | |
ATGCAACGTCATGATCACTT+TGG | + | chr3_4:6887312-6887331 | Msa0487750:intron | 40.0% | |
ACGTCATGATCACTTTGGTT+TGG | + | chr3_4:6887317-6887336 | Msa0487750:intron | 40.0% | |
! | TGAGTATTGTTGGGGAAGTT+CGG | + | chr3_4:6887378-6887397 | Msa0487750:intron | 40.0% |
! | CTCTCTTGTGGCTTTTGAAT+CGG | - | chr3_4:6887422-6887441 | None:intergenic | 40.0% |
GATTCAAAAGCCACAAGAGA+GGG | + | chr3_4:6887421-6887440 | Msa0487750:intron | 40.0% | |
!! | TGTTGGATTTCGAGTTTGAG+TGG | - | chr3_4:6887585-6887604 | None:intergenic | 40.0% |
CTTATGGAGGAGATTGTTGT+TGG | - | chr3_4:6887602-6887621 | None:intergenic | 40.0% | |
!! | CATGAATGGATTGTTATGGG+AGG | - | chr3_4:6887636-6887655 | None:intergenic | 40.0% |
ATGGTATCAAAGCCCTGATT+CGG | - | chr3_4:6887672-6887691 | None:intergenic | 40.0% | |
! | GGGCTTTGATACCATTTGTT+AGG | + | chr3_4:6887677-6887696 | Msa0487750:intron | 40.0% |
CTGAGTATAAAAAGGAGGGA+AGG | - | chr3_4:6888017-6888036 | None:intergenic | 40.0% | |
! | TAGGGTGTCAGATATTGGAA+TGG | - | chr3_4:6888234-6888253 | None:intergenic | 40.0% |
! | AAAGGTAGGGTGTCAGATAT+TGG | - | chr3_4:6888239-6888258 | None:intergenic | 40.0% |
GAGGGAAGAAGAAAAAAGGT+AGG | - | chr3_4:6888253-6888272 | None:intergenic | 40.0% | |
AGATGTAAAAGTGAGGGTGA+CGG | - | chr3_4:6888447-6888466 | None:intergenic | 40.0% | |
! | TCTTTTGTATGATCTGGAGG+AGG | - | chr3_4:6888634-6888653 | None:intergenic | 40.0% |
TGTCCATGAATCCAAAACAC+AGG | - | chr3_4:6888961-6888980 | None:intergenic | 40.0% | |
AGGCAGAAAACTTCAAGTCA+AGG | + | chr3_4:6889150-6889169 | Msa0487750:intron | 40.0% | |
!!! | GCAGGAGACAACATTGATTT+TGG | - | chr3_4:6889216-6889235 | None:intergenic | 40.0% |
GCTAAGATTACTGTTCCTGA+TGG | + | chr3_4:6889431-6889450 | Msa0487750:CDS | 40.0% | |
GAATTGGGACTGAAGAAATG+TGG | + | chr3_4:6889464-6889483 | Msa0487750:CDS | 40.0% | |
ACTGTTGCCAATTGTTGCTA+AGG | - | chr3_4:6883492-6883511 | None:intergenic | 40.0% | |
GAGCTCAGACAGTTTATGTT+TGG | - | chr3_4:6889665-6889684 | None:intergenic | 40.0% | |
! | TCTTTTCGTTCCAAAGCCTT+TGG | + | chr3_4:6889737-6889756 | Msa0487750:CDS | 40.0% |
AGGAACATACTACACAATGG+AGG | - | chr3_4:6889854-6889873 | None:intergenic | 40.0% | |
TCCATTGTGTAGTATGTTCC+TGG | + | chr3_4:6889853-6889872 | Msa0487750:intron | 40.0% | |
ACCAGGAACATACTACACAA+TGG | - | chr3_4:6889857-6889876 | None:intergenic | 40.0% | |
!! | TGTTCCTGGTGAATTTGCTA+AGG | + | chr3_4:6889867-6889886 | Msa0487750:CDS | 40.0% |
ACAACTTTGAGCTGATCAAG+AGG | + | chr3_4:6890049-6890068 | Msa0487750:CDS | 40.0% | |
! | GTAACTTGTAACACCACAAC+AGG | - | chr3_4:6890078-6890097 | None:intergenic | 40.0% |
ACAAGTTACTGCTTCTTGCA+CGG | + | chr3_4:6890089-6890108 | Msa0487750:CDS | 40.0% | |
! | CTTCCTTTTCTGTCATTGAC+TGG | - | chr3_4:6884244-6884263 | None:intergenic | 40.0% |
GACAGCAACTCAAAACAGAA+AGG | - | chr3_4:6890350-6890369 | None:intergenic | 40.0% | |
ATGACTCGAAACTGTGTCAT+TGG | + | chr3_4:6890504-6890523 | Msa0487750:intron | 40.0% | |
ATTGGATTGTTGGAGACGAA+AGG | + | chr3_4:6890522-6890541 | Msa0487750:intron | 40.0% | |
! | GCCTAGTTTCAGTTCTAACT+TGG | - | chr3_4:6890562-6890581 | None:intergenic | 40.0% |
!!! | GTTACCCTCCTTTTGAAGTT+TGG | + | chr3_4:6884766-6884785 | Msa0487750:intron | 40.0% |
! | ATTTTCCAATCACGACCATC+AGG | - | chr3_4:6884894-6884913 | None:intergenic | 40.0% |
ACACTCACTTGTTTCAACCT+TGG | - | chr3_4:6891077-6891096 | None:intergenic | 40.0% | |
GTTGAAACAAGTGAGTGTCA+TGG | + | chr3_4:6891079-6891098 | Msa0487750:CDS | 40.0% | |
AAGTGAGTGTCATGGGAAAA+AGG | + | chr3_4:6891087-6891106 | Msa0487750:CDS | 40.0% | |
! | AGCATGTTTAGACACGCTTT+TGG | - | chr3_4:6891113-6891132 | None:intergenic | 40.0% |
AATCGCCAAGACGAAATATG+CGG | + | chr3_4:6891195-6891214 | Msa0487750:CDS | 40.0% | |
ACAAGGAACATACTGCACAA+TGG | - | chr3_4:6891299-6891318 | None:intergenic | 40.0% | |
! | TGGAGCTTTGTAGGAACATT+TGG | - | chr3_4:6891346-6891365 | None:intergenic | 40.0% |
ATCGTCTATGCGAATAGTGA+AGG | + | chr3_4:6891420-6891439 | Msa0487750:CDS | 40.0% | |
TCGTCTATGCGAATAGTGAA+GGG | + | chr3_4:6891421-6891440 | Msa0487750:CDS | 40.0% | |
ATTGTGACTTCTAGCACAAC+CGG | - | chr3_4:6891520-6891539 | None:intergenic | 40.0% | |
TTTGAATCTTTCTCCGGTGC+TGG | - | chr3_4:6882581-6882600 | None:intergenic | 45.0% | |
! | TCTTTTGTGTGATCTGGAGG+GGG | - | chr3_4:6882626-6882645 | None:intergenic | 45.0% |
TGGCGGAAAACTTTGAGTCA+CGG | + | chr3_4:6883114-6883133 | Msa0487750:intron | 45.0% | |
GCTAAGATTACTGTTCCCGA+TGG | + | chr3_4:6883421-6883440 | Msa0487750:CDS | 45.0% | |
ATTTCCCATTCACGACCATC+GGG | - | chr3_4:6883439-6883458 | None:intergenic | 45.0% | |
CATTTCCCATTCACGACCAT+CGG | - | chr3_4:6883440-6883459 | None:intergenic | 45.0% | |
GATGGTCGTGAATGGGAAAT+GGG | + | chr3_4:6883439-6883458 | Msa0487750:CDS | 45.0% | |
TACTGCATAAAAGCCCCTGA+CGG | - | chr3_4:6883746-6883765 | None:intergenic | 45.0% | |
! | TCAGGGGCTTTTATGCAGTA+AGG | + | chr3_4:6883746-6883765 | Msa0487750:intron | 45.0% |
GGAGGAGAGGTCAATTCAAA+TGG | - | chr3_4:6883821-6883840 | None:intergenic | 45.0% | |
AGGAACATACTGCACAATGG+AGG | - | chr3_4:6883839-6883858 | None:intergenic | 45.0% | |
GAGCTTGAACGGAACCTTTA+GGG | - | chr3_4:6883887-6883906 | None:intergenic | 45.0% | |
!! | ATGCGAATAACGGGTGGATT+TGG | + | chr3_4:6883970-6883989 | Msa0487750:CDS | 45.0% |
TTATTGCAATGCAGCCTCCA+CGG | + | chr3_4:6884207-6884226 | Msa0487750:intron | 45.0% | |
TGCCCAGTCAATGACAGAAA+AGG | + | chr3_4:6884238-6884257 | Msa0487750:CDS | 45.0% | |
TCTTTGTCATGAATGGGCGA+GGG | - | chr3_4:6884302-6884321 | None:intergenic | 45.0% | |
GCTACAATTACAGTTCCCGA+TGG | + | chr3_4:6884876-6884895 | Msa0487750:CDS | 45.0% | |
AGTTCCAGGGTTGAAACAAG+TGG | + | chr3_4:6885137-6885156 | Msa0487750:CDS | 45.0% | |
GTTGAAACAAGTGGCAGTCA+AGG | + | chr3_4:6885146-6885165 | Msa0487750:CDS | 45.0% | |
TGGAGTGCGATTGGAACATT+TGG | - | chr3_4:6885412-6885431 | None:intergenic | 45.0% | |
AAGGACAACCATCTGACACA+TGG | + | chr3_4:6885526-6885545 | Msa0487750:CDS | 45.0% | |
!! | TGAGTTGATCAAGGAGAAGC+CGG | + | chr3_4:6885564-6885583 | Msa0487750:CDS | 45.0% |
CCAACAATTCATCAAGCTGC+TGG | - | chr3_4:6885829-6885848 | None:intergenic | 45.0% | |
CCAGCAGCTTGATGAATTGT+TGG | + | chr3_4:6885826-6885845 | Msa0487750:intron | 45.0% | |
! | GTTGGACTAGACCTTCTACA+TGG | + | chr3_4:6885844-6885863 | Msa0487750:intron | 45.0% |
GACTAGACCTTCTACATGGT+TGG | + | chr3_4:6885848-6885867 | Msa0487750:intron | 45.0% | |
CTAGACCTTCTACATGGTTG+GGG | + | chr3_4:6885850-6885869 | Msa0487750:intron | 45.0% | |
TACATGGTTGGGGATGAGAT+TGG | + | chr3_4:6885860-6885879 | Msa0487750:intron | 45.0% | |
CAATGTGTGTCAATTGTGGG+CGG | + | chr3_4:6885923-6885942 | Msa0487750:intron | 45.0% | |
!!! | TTATGTTTTGGGGCCTCTCT+AGG | - | chr3_4:6886251-6886270 | None:intergenic | 45.0% |
ACTCGTGAGCATAACTCAAC+TGG | + | chr3_4:6886955-6886974 | Msa0487750:intron | 45.0% | |
TGAGCATAACTCAACTGGCA+GGG | + | chr3_4:6886960-6886979 | Msa0487750:intron | 45.0% | |
! | TGAGCTTAGCTCAGTTGGTA+GGG | - | chr3_4:6887275-6887294 | None:intergenic | 45.0% |
TACCAACTGAGCTAAGCTCA+CGG | + | chr3_4:6887141-6887160 | Msa0487750:intron | 45.0% | |
! | TGAGCTTAGCTCAGTTGGTA+AGG | + | chr3_4:6887275-6887294 | Msa0487750:intron | 45.0% |
! | GAGTATTGTTGGGGAAGTTC+GGG | + | chr3_4:6887379-6887398 | Msa0487750:intron | 45.0% |
AGTATTGTTGGGGAAGTTCG+GGG | + | chr3_4:6887380-6887399 | Msa0487750:intron | 45.0% | |
CGATTCAAAAGCCACAAGAG+AGG | + | chr3_4:6887420-6887439 | Msa0487750:intron | 45.0% | |
GGATGAACTCACACTTATGG+AGG | - | chr3_4:6887615-6887634 | None:intergenic | 45.0% | |
GGAGGATGAACTCACACTTA+TGG | - | chr3_4:6887618-6887637 | None:intergenic | 45.0% | |
! | ACCATTTGTTAGGGAGTCTC+TGG | + | chr3_4:6887687-6887706 | Msa0487750:intron | 45.0% |
TCCAGAGACTCCCTAACAAA+TGG | - | chr3_4:6887691-6887710 | None:intergenic | 45.0% | |
TGGAACGACAGGAGAAACAA+CGG | + | chr3_4:6887707-6887726 | Msa0487750:intron | 45.0% | |
TTCAGAAGACAGACACGCAA+AGG | - | chr3_4:6888397-6888416 | None:intergenic | 45.0% | |
GATGTAAAAGTGAGGGTGAC+GGG | - | chr3_4:6888446-6888465 | None:intergenic | 45.0% | |
! | GGTTGATTGAGCCTGTGTTT+TGG | + | chr3_4:6888947-6888966 | Msa0487750:intron | 45.0% |
!! | GAGCCTGTGTTTTGGATTCA+TGG | + | chr3_4:6888955-6888974 | Msa0487750:intron | 45.0% |
ACGTAGAGGCTCCAATTTGT+AGG | - | chr3_4:6889030-6889049 | None:intergenic | 45.0% | |
TACAAATTGGAGCCTCTACG+TGG | + | chr3_4:6889029-6889048 | Msa0487750:intron | 45.0% | |
TGTTCCTGATGGTCGTGAAT+GGG | + | chr3_4:6889442-6889461 | Msa0487750:CDS | 45.0% | |
AATTCCCATTCACGACCATC+AGG | - | chr3_4:6889449-6889468 | None:intergenic | 45.0% | |
TGATGGTCGTGAATGGGAAT+TGG | + | chr3_4:6889448-6889467 | Msa0487750:CDS | 45.0% | |
GATGGTCGTGAATGGGAATT+GGG | + | chr3_4:6889449-6889468 | Msa0487750:CDS | 45.0% | |
CTTATCCATTCCAAACTCGG+AGG | + | chr3_4:6889627-6889646 | Msa0487750:CDS | 45.0% | |
TTAGTCCTCCGAGTTTGGAA+TGG | - | chr3_4:6889635-6889654 | None:intergenic | 45.0% | |
TTCCAAACTCGGAGGACTAA+TGG | + | chr3_4:6889635-6889654 | Msa0487750:CDS | 45.0% | |
CTCTGCTTCCGAAAGATCAA+AGG | + | chr3_4:6889682-6889701 | Msa0487750:CDS | 45.0% | |
GGCAGCATCCTTTGATCTTT+CGG | - | chr3_4:6889693-6889712 | None:intergenic | 45.0% | |
AGATCAAAGGATGCTGCCAA+TGG | + | chr3_4:6889695-6889714 | Msa0487750:CDS | 45.0% | |
TGCTCCTTAGCAAATTCACC+AGG | - | chr3_4:6889874-6889893 | None:intergenic | 45.0% | |
TGGAGCATGAACGGAACATT+TGG | - | chr3_4:6889904-6889923 | None:intergenic | 45.0% | |
!! | GTGGGAAGTTTCTGGTGTAT+TGG | + | chr3_4:6889942-6889961 | Msa0487750:CDS | 45.0% |
TCAGCAATGCGAATTACGAG+TGG | + | chr3_4:6889979-6889998 | Msa0487750:CDS | 45.0% | |
TGCCCAGTCAATGACAGAAA+AGG | + | chr3_4:6884238-6884257 | Msa0487750:CDS | 45.0% | |
TCTTTGTCATGAATGGGCGA+GGG | - | chr3_4:6884302-6884321 | None:intergenic | 45.0% | |
CTGCAGTGATAACAGCTCAT+TGG | - | chr3_4:6884805-6884824 | None:intergenic | 45.0% | |
GCTACAGTTACAGTTCCTGA+TGG | + | chr3_4:6890809-6890828 | Msa0487750:CDS | 45.0% | |
! | GGACTAGCACACTTTGTGTT+TGG | - | chr3_4:6891043-6891062 | None:intergenic | 45.0% |
ACACAAAGTGTGCTAGTCCT+AGG | + | chr3_4:6891044-6891063 | Msa0487750:CDS | 45.0% | |
AGTGTGCTAGTCCTAGGAAA+AGG | + | chr3_4:6891050-6891069 | Msa0487750:CDS | 45.0% | |
TAGTCCTAGGAAAAGGTCCA+AGG | + | chr3_4:6891057-6891076 | Msa0487750:CDS | 45.0% | |
! | TCAACCTTGGACCTTTTCCT+AGG | - | chr3_4:6891064-6891083 | None:intergenic | 45.0% |
ACATGCTTCTACAAGAGCAG+AGG | + | chr3_4:6891126-6891145 | Msa0487750:CDS | 45.0% | |
!!! | AGTGGGAAGTGTTTTGCATG+CGG | + | chr3_4:6891383-6891402 | Msa0487750:CDS | 45.0% |
TCGCATAGACGATGATCTGA+CGG | - | chr3_4:6891413-6891432 | None:intergenic | 45.0% | |
ACGGACAACAATCTGTCACA+TGG | + | chr3_4:6891460-6891479 | Msa0487750:CDS | 45.0% | |
TGAGCTCATCAAGAAGAAGC+CGG | + | chr3_4:6891498-6891517 | Msa0487750:CDS | 45.0% | |
!!! | AAGAAATAAATATATATTTT+AGG | - | chr3_4:6887463-6887482 | None:intergenic | 5.0% |
!! | TAAAATATTCTTAATTTAAT+GGG | - | chr3_4:6887976-6887995 | None:intergenic | 5.0% |
!! | ATAAAATATTCTTAATTTAA+TGG | - | chr3_4:6887977-6887996 | None:intergenic | 5.0% |
GTGTCGGAACACATCTTCTC+CGG | - | chr3_4:6882553-6882572 | None:intergenic | 50.0% | |
TGTTCCCGATGGTCGTGAAT+GGG | + | chr3_4:6883432-6883451 | Msa0487750:CDS | 50.0% | |
CGATGGTCGTGAATGGGAAA+TGG | + | chr3_4:6883438-6883457 | Msa0487750:CDS | 50.0% | |
! | GCTCTTCTGGAAGCAGAGTT+AGG | - | chr3_4:6883670-6883689 | None:intergenic | 50.0% |
! | GGCAGCACATTTTGCTCTTC+TGG | - | chr3_4:6883683-6883702 | None:intergenic | 50.0% |
CATACTGCACAATGGAGGAG+AGG | - | chr3_4:6883834-6883853 | None:intergenic | 50.0% | |
GGAGCTTGAACGGAACCTTT+AGG | - | chr3_4:6883888-6883907 | None:intergenic | 50.0% | |
! | TCACACATGCGAATAACGGG+TGG | + | chr3_4:6883964-6883983 | Msa0487750:CDS | 50.0% |
TATTGCAATGCAGCCTCCAC+GGG | + | chr3_4:6884208-6884227 | Msa0487750:intron | 50.0% | |
ATGAATGGGCGAGGGAAGTA+TGG | - | chr3_4:6884294-6884313 | None:intergenic | 50.0% | |
CTCTTTGTCATGAATGGGCG+AGG | - | chr3_4:6884303-6884322 | None:intergenic | 50.0% | |
! | ACTGCCACTTGTTTCAACCC+TGG | - | chr3_4:6885144-6885163 | None:intergenic | 50.0% |
CTCATCCCCAACCATGTAGA+AGG | - | chr3_4:6885858-6885877 | None:intergenic | 50.0% | |
! | GATGAGATTGGCTGTGGTGA+TGG | + | chr3_4:6885872-6885891 | Msa0487750:intron | 50.0% |
CGCCCACAATTGACACACAT+TGG | - | chr3_4:6885925-6885944 | None:intergenic | 50.0% | |
CCAACTGAGCTAAGCTTACG+AGG | - | chr3_4:6886664-6886683 | None:intergenic | 50.0% | |
CCTCGTAAGCTTAGCTCAGT+TGG | + | chr3_4:6886661-6886680 | Msa0487750:intron | 50.0% | |
! | ACATCCTGCAGCAAAAGCAC+AGG | + | chr3_4:6886792-6886811 | Msa0487750:intron | 50.0% |
! | GTTTCCTGTGCTTTTGCTGC+AGG | - | chr3_4:6886799-6886818 | None:intergenic | 50.0% |
GTGAGCATAACTCAACTGGC+AGG | + | chr3_4:6886959-6886978 | Msa0487750:intron | 50.0% | |
! | TTGTGTGAGCTCTAGCCACT+AGG | - | chr3_4:6887053-6887072 | None:intergenic | 50.0% |
GTGAGCTTAGCTCAGTTGGT+AGG | - | chr3_4:6887274-6887293 | None:intergenic | 50.0% | |
TTCCGTGAGCTTAGCTCAGT+TGG | - | chr3_4:6887146-6887165 | None:intergenic | 50.0% | |
GTATTGTTGGGGAAGTTCGG+GGG | + | chr3_4:6887381-6887400 | Msa0487750:intron | 50.0% | |
! | GCTTGGTCAGAGAGCATGAA+TGG | - | chr3_4:6887650-6887669 | None:intergenic | 50.0% |
TCTCTGACCAAGCCGAATCA+GGG | + | chr3_4:6887657-6887676 | Msa0487750:intron | 50.0% | |
!! | ATCAAAGCCCTGATTCGGCT+TGG | - | chr3_4:6887667-6887686 | None:intergenic | 50.0% |
! | CGGGAGATAGAGAGAGTGTA+TGG | - | chr3_4:6888427-6888446 | None:intergenic | 50.0% |
TTTGAATCCTTCTCCGGCGA+CGG | - | chr3_4:6888589-6888608 | None:intergenic | 50.0% | |
CTGTTCCTGATGGTCGTGAA+TGG | + | chr3_4:6889441-6889460 | Msa0487750:CDS | 50.0% | |
CTCCATTAGTCCTCCGAGTT+TGG | - | chr3_4:6889640-6889659 | None:intergenic | 50.0% | |
TGCATAGCAGCCAAAGGCTT+TGG | - | chr3_4:6889750-6889769 | None:intergenic | 50.0% | |
GGAAAGCAGTGGGAAGTTTC+TGG | + | chr3_4:6889934-6889953 | Msa0487750:CDS | 50.0% | |
GATCAAGAGGAAGCCTGTTG+TGG | + | chr3_4:6884047-6884066 | Msa0487750:CDS | 50.0% | |
TATTGCAATGCAGCCTCCAC+AGG | + | chr3_4:6884208-6884227 | Msa0487750:intron | 50.0% | |
ATTGCAATGCAGCCTCCACA+GGG | + | chr3_4:6890221-6890240 | Msa0487750:intron | 50.0% | |
ATGAATGGGCGAGGGAAGTA+TGG | - | chr3_4:6884294-6884313 | None:intergenic | 50.0% | |
CTCTTTGTCATGAATGGGCG+AGG | - | chr3_4:6884303-6884322 | None:intergenic | 50.0% | |
CAGTTCCTGATGGTCGTGAT+TGG | + | chr3_4:6890819-6890838 | Msa0487750:CDS | 50.0% | |
CCTCACCGCATATTTCGTCT+TGG | - | chr3_4:6891203-6891222 | None:intergenic | 50.0% | |
CCAAGACGAAATATGCGGTG+AGG | + | chr3_4:6891200-6891219 | Msa0487750:intron | 50.0% | |
!! | TCTTTCTCCGGTGCTGGTGA+CGG | - | chr3_4:6882575-6882594 | None:intergenic | 55.0% |
CTGTTCCCGATGGTCGTGAA+TGG | + | chr3_4:6883431-6883450 | Msa0487750:CDS | 55.0% | |
ATTGCAATGCAGCCTCCACG+GGG | + | chr3_4:6884209-6884228 | Msa0487750:intron | 55.0% | |
CAGTTCCCGATGGTCGTGAT+TGG | + | chr3_4:6884886-6884905 | Msa0487750:CDS | 55.0% | |
! | GTTGGGGATGAGATTGGCTG+TGG | + | chr3_4:6885866-6885885 | Msa0487750:intron | 55.0% |
TGTCAATTGTGGGCGGTACG+TGG | + | chr3_4:6885930-6885949 | Msa0487750:intron | 55.0% | |
!! | GGGTGTTGGGGTTCAAACCT+CGG | - | chr3_4:6887009-6887028 | None:intergenic | 55.0% |
! | TGTGGAGAAGTGGAGTGTCC+AGG | + | chr3_4:6887079-6887098 | Msa0487750:intron | 55.0% |
! | GTGGAGAAGTGGAGTGTCCA+GGG | + | chr3_4:6887080-6887099 | Msa0487750:intron | 55.0% |
AGTGTCCAGGGTTCGAACCA+TGG | + | chr3_4:6887092-6887111 | Msa0487750:intron | 55.0% | |
CTCTCTGACCAAGCCGAATC+AGG | + | chr3_4:6887656-6887675 | Msa0487750:intron | 55.0% | |
!! | TAGGGAGTCTCTGGAACGAC+AGG | + | chr3_4:6887696-6887715 | Msa0487750:intron | 55.0% |
GCGACGGAACACATCTTCTC+CGG | - | chr3_4:6888573-6888592 | None:intergenic | 55.0% | |
GAGAAGATGTGTTCCGTCGC+CGG | + | chr3_4:6888573-6888592 | Msa0487750:CDS | 55.0% | |
GTGACTGTGAGTCCACGTAG+AGG | - | chr3_4:6889044-6889063 | None:intergenic | 55.0% | |
CCTCACTGCATAGCAGCCAA+AGG | - | chr3_4:6889756-6889775 | None:intergenic | 55.0% | |
CCTTTGGCTGCTATGCAGTG+AGG | + | chr3_4:6889753-6889772 | Msa0487750:intron | 55.0% | |
AGAGGCCATGGTTCGAACCC+TGG | - | chr3_4:6887100-6887119 | None:intergenic | 60.0% | |
TGTGGCGTCTCCCTCTCTTG+TGG | - | chr3_4:6887434-6887453 | None:intergenic | 60.0% | |
ATGTGTTCCGTCGCCGGAGA+AGG | + | chr3_4:6888579-6888598 | Msa0487750:CDS | 60.0% | |
CAATGCAGCCTCCACAGGGA+AGG | + | chr3_4:6890225-6890244 | Msa0487750:intron | 60.0% | |
TCCGACACCGTCACCAGCAC+CGG | + | chr3_4:6882565-6882584 | Msa0487750:CDS | 65.0% | |
!! | TCCGGTGCTGGTGACGGTGT+CGG | - | chr3_4:6882569-6882588 | None:intergenic | 65.0% |
TGGGCAGACATTCCCCGTGG+AGG | - | chr3_4:6884224-6884243 | None:intergenic | 65.0% | |
GACTGGGCAGACATTCCCCG+TGG | - | chr3_4:6884227-6884246 | None:intergenic | 65.0% | |
TGGGCACACCTTCCCTGTGG+AGG | - | chr3_4:6890236-6890255 | None:intergenic | 65.0% | |
GACTGGGCACACCTTCCCTG+TGG | - | chr3_4:6890239-6890258 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 6882539 | 6891567 | 6882539 | ID=Msa0487750;Name=Msa0487750 |
chr3_4 | mRNA | 6882539 | 6891567 | 6882539 | ID=Msa0487750-mRNA-1;Parent=Msa0487750;Name=Msa0487750-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.26|0.12|1|0.66|0.37|16|0|1029 |
chr3_4 | exon | 6882539 | 6882649 | 6882539 | ID=Msa0487750-mRNA-1:exon:2405;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6883370 | 6883538 | 6883370 | ID=Msa0487750-mRNA-1:exon:2406;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6883551 | 6883762 | 6883551 | ID=Msa0487750-mRNA-1:exon:2407;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6883850 | 6884092 | 6883850 | ID=Msa0487750-mRNA-1:exon:2408;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6884221 | 6884325 | 6884221 | ID=Msa0487750-mRNA-1:exon:2409;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6884825 | 6885052 | 6884825 | ID=Msa0487750-mRNA-1:exon:2410;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6885068 | 6885283 | 6885068 | ID=Msa0487750-mRNA-1:exon:2411;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6885373 | 6885610 | 6885373 | ID=Msa0487750-mRNA-1:exon:2412;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6888509 | 6888657 | 6888509 | ID=Msa0487750-mRNA-1:exon:2413;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6889380 | 6889548 | 6889380 | ID=Msa0487750-mRNA-1:exon:2414;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6889561 | 6889769 | 6889561 | ID=Msa0487750-mRNA-1:exon:2415;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6889865 | 6890110 | 6889865 | ID=Msa0487750-mRNA-1:exon:2416;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6890233 | 6890337 | 6890233 | ID=Msa0487750-mRNA-1:exon:2417;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6890758 | 6890970 | 6890758 | ID=Msa0487750-mRNA-1:exon:2418;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6891001 | 6891216 | 6891001 | ID=Msa0487750-mRNA-1:exon:2419;Parent=Msa0487750-mRNA-1 |
chr3_4 | exon | 6891307 | 6891567 | 6891307 | ID=Msa0487750-mRNA-1:exon:2420;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6882539 | 6882649 | 6882539 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6883370 | 6883538 | 6883370 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6883551 | 6883762 | 6883551 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6883850 | 6884092 | 6883850 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6884221 | 6884325 | 6884221 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6884825 | 6885052 | 6884825 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6885068 | 6885283 | 6885068 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6885373 | 6885610 | 6885373 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6888509 | 6888657 | 6888509 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6889380 | 6889548 | 6889380 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6889561 | 6889769 | 6889561 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6889865 | 6890110 | 6889865 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6890233 | 6890337 | 6890233 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6890758 | 6890970 | 6890758 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6891001 | 6891216 | 6891001 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
chr3_4 | CDS | 6891307 | 6891567 | 6891307 | ID=Msa0487750-mRNA-1:cds;Parent=Msa0487750-mRNA-1 |
Gene Sequence |
Protein sequence |