AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0488160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0488160 MtrunA17_Chr3g0077801 86.932 352 46 0 178 529 1 352 0.0 640
Msa0488160 MtrunA17_Chr4g0075971 60.714 532 187 7 2 526 83 599 0.0 587
Msa0488160 MtrunA17_Chr4g0075971 40.523 153 81 3 25 177 25 167 3.05e-23 103
Msa0488160 MtrunA17_Chr3g0077901 72.650 351 96 0 174 524 17 367 0.0 537
Msa0488160 MtrunA17_Chr3g0077851 76.737 331 77 0 194 524 1 331 0.0 528
Msa0488160 MtrunA17_Chr6g0488101 51.885 451 189 9 101 529 11 455 8.68e-153 444
Msa0488160 MtrunA17_Chr6g0488271 51.905 420 182 7 125 529 1 415 1.29e-143 419
Msa0488160 MtrunA17_Chr3g0112311 58.611 360 132 4 178 526 1 354 2.12e-136 399
Msa0488160 MtrunA17_Chr7g0252101 52.874 435 181 10 101 529 16 432 3.14e-135 399
Msa0488160 MtrunA17_Chr7g0243331 58.092 346 141 4 185 529 8 350 4.48e-127 375
Msa0488160 MtrunA17_Chr3g0093911 55.899 356 147 5 178 529 1 350 7.45e-126 372
Msa0488160 MtrunA17_Chr1g0207351 55.618 356 145 5 182 529 16 366 1.17e-121 362
Msa0488160 MtrunA17_Chr3g0077941 97.143 175 5 0 1 175 1 175 2.70e-119 348
Msa0488160 MtrunA17_Chr6g0452641 57.742 310 119 3 229 529 34 340 1.85e-106 322
Msa0488160 MtrunA17_Chr3g0077881 89.205 176 18 1 1 175 1 176 4.88e-105 312
Msa0488160 MtrunA17_Chr1g0209051 58.889 270 103 3 263 528 5 270 1.18e-98 299
Msa0488160 MtrunA17_Chr3g0077891 89.205 176 18 1 1 175 1 176 1.51e-97 293
Msa0488160 MtrunA17_Chr3g0122991 48.287 321 106 4 183 493 5 275 8.32e-95 289
Msa0488160 MtrunA17_Chr4g0075861 55.184 299 124 5 2 298 83 373 7.58e-87 273
Msa0488160 MtrunA17_Chr4g0075861 41.830 153 79 3 25 177 25 167 2.70e-25 107
Msa0488160 MtrunA17_Chr3g0123471 55.894 263 110 4 260 521 2 259 3.03e-85 264
Msa0488160 MtrunA17_Chr3g0077861 62.286 175 58 2 1 175 1 167 1.32e-60 197
Msa0488160 MtrunA17_Chr7g0243391 51.869 214 101 1 174 387 14 225 5.69e-59 195
Msa0488160 MtrunA17_Chr3g0077911 63.415 164 52 2 1 164 1 156 6.46e-59 192
Msa0488160 MtrunA17_Chr3g0077911 46.250 80 39 1 98 177 8 83 5.35e-12 64.3
Msa0488160 MtrunA17_Chr1g0202841 54.023 174 76 2 359 529 7 179 5.03e-55 183
Msa0488160 MtrunA17_Chr6g0486591 50.943 159 69 2 380 529 1 159 1.22e-44 154
Msa0488160 MtrunA17_Chr1g0196231 42.241 232 105 7 97 320 156 366 7.68e-43 156
Msa0488160 MtrunA17_Chr1g0187941 52.593 135 61 1 353 484 1 135 3.24e-36 131
Msa0488160 MtrunA17_Chr3g0077811 76.042 96 23 0 1 96 6 101 8.78e-36 129
Msa0488160 MtrunA17_Chr3g0077811 40.179 112 37 1 94 175 9 120 7.37e-14 68.2
Msa0488160 MtrunA17_Chr1g0206951 57.522 113 47 1 181 292 2 114 2.47e-35 128
Msa0488160 MtrunA17_Chr1g0205821 45.679 162 83 4 6 167 11 167 1.29e-31 120
Msa0488160 MtrunA17_Chr1g0209191 56.122 98 39 1 435 528 1 98 3.81e-29 110
Msa0488160 MtrunA17_Chr1g0206771 42.767 159 79 2 9 167 17 163 2.12e-28 111
Msa0488160 MtrunA17_Chr1g0206771 49.275 69 34 1 8 76 95 162 5.22e-11 62.0
Msa0488160 MtrunA17_Chr6g0459061 27.575 301 210 6 186 484 18 312 1.32e-27 114
Msa0488160 MtrunA17_Chr8g0364231 43.750 160 85 3 2 161 36 190 6.08e-26 112
Msa0488160 MtrunA17_Chr8g0364231 38.235 136 65 2 91 226 35 151 8.79e-19 90.5
Msa0488160 MtrunA17_Chr7g0238781 42.105 133 75 2 210 342 27 157 2.95e-25 102
Msa0488160 MtrunA17_Chr1g0196241 68.056 72 22 1 426 496 3 74 5.31e-25 99.0
Msa0488160 MtrunA17_Chr1g0205831 38.462 169 81 5 23 191 16 161 5.21e-24 99.0
Msa0488160 MtrunA17_Chr6g0452021 39.752 161 88 4 2 161 37 189 6.82e-22 98.6
Msa0488160 MtrunA17_Chr6g0452021 34.586 133 66 3 94 226 39 150 4.17e-13 71.6
Msa0488160 MtrunA17_Chr7g0218891 35.542 166 100 3 8 171 99 259 2.00e-21 94.4
Msa0488160 MtrunA17_Chr7g0218891 35.870 184 107 4 2 179 7 185 3.79e-20 90.5
Msa0488160 MtrunA17_Chr7g0218891 42.857 77 43 1 8 83 185 261 4.14e-12 66.6
Msa0488160 MtrunA17_Chr5g0415031 39.130 161 93 3 2 162 37 192 2.35e-21 98.6
Msa0488160 MtrunA17_Chr5g0415031 54.054 74 33 1 94 167 39 111 4.28e-16 82.0
Msa0488160 MtrunA17_Chr6g0452001 39.752 161 90 4 2 161 57 211 6.18e-21 97.4
Msa0488160 MtrunA17_Chr6g0452001 48.649 74 37 1 94 167 59 131 9.86e-14 74.3
Msa0488160 MtrunA17_Chr1g0205811 47.664 107 43 2 5 98 9 115 9.75e-21 87.8
Msa0488160 MtrunA17_Chr1g0205811 43.750 80 44 1 98 177 14 92 1.08e-11 62.0
Msa0488160 MtrunA17_Chr1g0209061 42.975 121 45 5 98 217 10 107 1.39e-19 84.3
Msa0488160 MtrunA17_Chr1g0205801 50.538 93 41 2 6 98 10 97 6.00e-18 79.7
Msa0488160 MtrunA17_Chr1g0209201 37.762 143 74 3 7 149 15 142 7.78e-17 77.4
Msa0488160 MtrunA17_Chr1g0209201 41.250 80 45 1 98 177 16 93 3.03e-12 64.3
Msa0488160 MtrunA17_Chr1g0206781 39.850 133 49 3 2 134 5 106 1.52e-15 73.2
Msa0488160 MtrunA17_Chr1g0206781 49.398 83 41 1 94 176 7 88 1.86e-15 72.8
Msa0488160 MtrunA17_Chr8g0364021 51.948 77 36 1 2 78 38 113 1.06e-14 73.9
Msa0488160 MtrunA17_Chr8g0364021 42.857 98 53 2 91 188 37 131 3.12e-14 72.4
Msa0488160 MtrunA17_Chr1g0205861 36.752 117 73 1 84 200 2 117 2.19e-13 67.0
Msa0488160 MtrunA17_Chr2g0328701 40.426 94 47 1 25 118 42 126 1.22e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0488160 AT3G01320.2 41.875 160 87 3 2 161 51 204 1.07e-22 103
Msa0488160 AT3G01320.2 50.000 74 36 1 94 167 53 125 3.05e-14 76.6
Msa0488160 AT3G01320.1 41.875 160 87 3 2 161 51 204 1.18e-22 103
Msa0488160 AT3G01320.1 50.000 74 36 1 94 167 53 125 3.19e-14 76.6
Msa0488160 AT1G70030.1 38.889 162 88 4 2 161 5 157 6.95e-22 92.8
Msa0488160 AT1G70060.2 39.375 160 93 3 2 161 8 163 3.56e-21 98.6
Msa0488160 AT1G70060.2 49.351 77 38 1 91 167 7 82 2.44e-14 76.6
Msa0488160 AT1G70060.1 39.375 160 93 3 2 161 8 163 3.56e-21 98.6
Msa0488160 AT1G70060.1 49.351 77 38 1 91 167 7 82 2.44e-14 76.6
Msa0488160 AT5G15020.1 36.723 177 105 3 2 178 46 215 1.31e-20 96.7
Msa0488160 AT5G15020.2 36.723 177 105 3 2 178 46 215 1.45e-20 96.7
Msa0488160 AT1G24190.3 36.875 160 96 3 2 161 8 162 1.63e-20 96.3
Msa0488160 AT1G24190.3 43.182 88 42 2 91 171 7 93 8.45e-14 75.1
Msa0488160 AT1G24190.2 36.875 160 96 3 2 161 8 162 1.67e-20 96.3
Msa0488160 AT1G24190.2 43.182 88 42 2 91 171 7 93 8.57e-14 75.1
Msa0488160 AT1G24190.1 36.875 160 96 3 2 161 8 162 1.70e-20 96.3
Msa0488160 AT1G24190.1 43.182 88 42 2 91 171 7 93 8.07e-14 75.1
Msa0488160 AT1G24230.1 32.941 170 93 3 5 173 11 160 2.11e-19 88.2
Msa0488160 AT1G24230.1 29.333 150 98 2 8 157 86 227 8.31e-12 65.9
Msa0488160 AT1G10450.3 37.576 165 94 4 8 171 84 240 9.97e-19 90.9
Msa0488160 AT1G10450.3 44.444 90 42 2 96 178 82 170 1.01e-13 74.7
Msa0488160 AT1G10450.2 37.576 165 94 4 8 171 33 189 1.16e-18 90.5
Msa0488160 AT1G10450.2 44.444 90 42 2 96 178 31 119 9.77e-14 74.7
Msa0488160 AT1G10450.1 37.576 165 94 4 8 171 33 189 1.16e-18 90.5
Msa0488160 AT1G10450.1 44.444 90 42 2 96 178 31 119 9.77e-14 74.7
Msa0488160 AT1G24250.1 30.667 150 87 2 27 160 33 181 8.65e-18 83.6
Msa0488160 AT1G24200.1 35.220 159 95 3 3 161 9 159 2.34e-17 80.9
Msa0488160 AT1G24200.1 45.455 99 43 3 91 181 7 102 4.44e-14 71.6
Msa0488160 AT1G59890.2 37.013 154 90 3 8 161 45 191 5.04e-17 85.5
Msa0488160 AT1G59890.2 54.286 70 31 1 98 167 45 113 6.36e-15 78.6
Msa0488160 AT1G59890.1 37.013 154 90 3 8 161 45 191 5.16e-17 85.1
Msa0488160 AT1G59890.1 54.286 70 31 1 98 167 45 113 6.08e-15 78.6
Msa0488160 AT1G59890.3 37.013 154 90 3 8 161 45 191 5.78e-17 85.1
Msa0488160 AT1G59890.3 54.286 70 31 1 98 167 45 113 6.51e-15 78.6
Msa0488160 AT1G59890.4 37.013 154 90 3 8 161 45 191 5.92e-17 85.1
Msa0488160 AT1G59890.4 54.286 70 31 1 98 167 45 113 7.28e-15 78.6
Msa0488160 AT5G15025.1 55.405 74 32 1 94 167 43 115 1.33e-16 76.6
Msa0488160 AT5G15025.1 47.059 85 39 2 4 88 43 121 9.46e-12 62.8
Msa0488160 AT1G23810.1 29.814 161 107 2 5 160 11 170 4.99e-15 75.5
Msa0488160 AT1G70030.3 42.609 115 55 4 2 114 16 121 8.33e-15 71.6
Msa0488160 AT1G70030.2 35.802 162 61 5 2 161 16 136 9.48e-15 72.0
Msa0488160 AT1G27260.1 32.680 153 100 3 9 160 4 154 6.41e-14 71.6
Msa0488160 AT1G27220.1 43.750 80 44 1 98 177 14 92 4.53e-13 68.2
Msa0488160 AT4G12020.11 45.946 74 38 1 94 167 304 375 3.60e-11 66.6
Msa0488160 AT4G12020.4 45.570 79 39 2 91 167 299 375 3.80e-11 66.6
Msa0488160 AT4G12020.10 45.570 79 39 2 91 167 299 375 3.83e-11 66.6
Msa0488160 AT4G12020.2 45.570 79 39 2 91 167 299 375 3.84e-11 66.6
Msa0488160 AT4G12020.3 45.570 79 39 2 91 167 299 375 3.90e-11 66.6
Msa0488160 AT4G12020.6 45.570 79 39 2 91 167 299 375 4.03e-11 66.6
Msa0488160 AT4G12020.8 45.570 79 39 2 91 167 299 375 4.03e-11 66.6
Msa0488160 AT1G27250.1 47.692 65 33 1 98 162 21 84 4.03e-11 61.2
Msa0488160 AT4G12020.7 45.570 79 39 2 91 167 299 375 4.18e-11 66.6
Msa0488160 AT4G12020.1 45.570 79 39 2 91 167 299 375 4.22e-11 66.6
Msa0488160 AT4G12020.9 45.570 79 39 2 91 167 299 375 4.22e-11 66.6
Msa0488160 AT4G12020.5 47.222 72 36 1 96 167 239 308 4.23e-11 66.6

Find 101 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGCATACGGATTTAATTT+TGG 0.145300 3_4:-7426148 Msa0488160:CDS
ACCTTCTTTCTTCTTGTAAA+TGG 0.145840 3_4:+7424562 None:intergenic
TGTCTATCAGTCTGGAAATT+TGG 0.158326 3_4:-7424416 Msa0488160:CDS
TTCTGGCACGTTGCTTATTC+TGG 0.158749 3_4:-7424643 Msa0488160:CDS
GGGAATTTCATAAAACTTAT+TGG 0.162427 3_4:-7424786 Msa0488160:CDS
ATAAGAAGAATTGACTTTAA+AGG 0.192960 3_4:+7424525 None:intergenic
CTATCATGCTTAATGTATTT+TGG 0.196702 3_4:+7423953 None:intergenic
TTTGAATAAGTAATGGTTCT+TGG 0.234598 3_4:+7424746 None:intergenic
TACCATGTCTTGCTTGCTTT+TGG 0.255664 3_4:-7424496 Msa0488160:CDS
AAGATGGTTGTAAAATTTCT+TGG 0.292218 3_4:-7424885 Msa0488160:CDS
TTCCATCTTGACAAAATTCA+TGG 0.296900 3_4:+7424129 None:intergenic
ATTTCGAAATTAAATCTTCA+TGG 0.307910 3_4:+7426415 None:intergenic
ACAACATGTAAAGTGTGTTT+AGG 0.310726 3_4:-7423992 Msa0488160:CDS
GTCTATCAGTCTGGAAATTT+GGG 0.319305 3_4:-7424415 Msa0488160:CDS
CTTTCAAAACCCCACCTTCT+CGG 0.331626 3_4:+7424046 None:intergenic
GGAAAAGGATTTCTTATCAT+TGG 0.332744 3_4:+7424717 None:intergenic
CAACATGTAAAGTGTGTTTA+GGG 0.332853 3_4:-7423991 Msa0488160:CDS
GTCGCTTCATGTAAAAGTTC+TGG 0.337852 3_4:-7424448 Msa0488160:CDS
GGTGTGATTCGATATTTCTT+TGG 0.344227 3_4:+7426108 None:intergenic
AAAGGAAAACGCCTACTTGC+TGG 0.351938 3_4:-7423915 Msa0488160:CDS
ATCAGTCTGGAAATTTGGGC+TGG 0.359141 3_4:-7424411 Msa0488160:CDS
CCAAGGCGATCAATCAATTC+TGG 0.360139 3_4:-7424660 Msa0488160:CDS
ACAAATTATGAAGGATTTCA+AGG 0.367445 3_4:-7426493 Msa0488160:CDS
GTAGGTTTGGATTTGAGAAA+AGG 0.371809 3_4:-7426536 Msa0488160:CDS
ATTAAGAGTGTACGAGTTGT+TGG 0.382597 3_4:-7426442 Msa0488160:CDS
TAACCGGTGTCAAGCTGAAC+TGG 0.385684 3_4:+7426084 None:intergenic
TACACCTATGTTGGCCTTGT+CGG 0.389440 3_4:+7424312 None:intergenic
AGATGGTTGTAAAATTTCTT+GGG 0.404155 3_4:-7424884 Msa0488160:CDS
GCAGCAGTTAAACGTAGGTT+TGG 0.408891 3_4:-7426549 Msa0488160:CDS
TTTCAAAACCCCACCTTCTC+GGG 0.416348 3_4:+7424047 None:intergenic
CAATAACCAGATTACTCAAC+TGG 0.422972 3_4:+7423851 None:intergenic
GATGACCTCTTTCAATTCGC+TGG 0.428564 3_4:-7424826 Msa0488160:CDS
AAAGTAAAAGATGTGTTTCA+TGG 0.431621 3_4:-7426276 Msa0488160:CDS
TAGGTTTGGATTTGAGAAAA+GGG 0.438311 3_4:-7426535 Msa0488160:CDS
TAAACACACTTTACATGTTG+TGG 0.439177 3_4:+7423994 None:intergenic
AGCGGATATTTGATCATGAC+AGG 0.440460 3_4:-7424613 Msa0488160:CDS
ATTGTTAAGGATTTCAAGGC+TGG 0.451018 3_4:-7426219 Msa0488160:CDS
GTCATCGAAATCTAGATCTC+TGG 0.451722 3_4:+7424843 None:intergenic
TCGATATTTCTTTGGCAAGA+AGG 0.460534 3_4:+7426116 None:intergenic
TCGCTGGTGTGTGCAAGAAT+TGG 0.467150 3_4:-7424810 Msa0488160:CDS
TTTGTCAAGATGGAAACTTT+GGG 0.468280 3_4:-7424121 Msa0488160:CDS
AGTTTGTATGTCTATCAGTC+TGG 0.474620 3_4:-7424424 Msa0488160:CDS
AAAACGCCTACTTGCTGGAT+TGG 0.477038 3_4:-7423910 Msa0488160:CDS
CTCAGGATGGTTAGTTGTGA+TGG 0.492017 3_4:-7424217 Msa0488160:CDS
ATATGAAATCAAACTTCCAT+TGG 0.495726 3_4:-7426370 Msa0488160:CDS
TCCATTTACAAGAAGAAAGA+AGG 0.500617 3_4:-7424563 Msa0488160:CDS
TCGGTCAGCTATGCTGATGA+AGG 0.509137 3_4:+7424696 None:intergenic
TCATCGTCGTCACGATCCAA+TGG 0.515446 3_4:+7426354 None:intergenic
AGAGGGAATGATCTGCTTCA+AGG 0.517258 3_4:-7426168 Msa0488160:CDS
TCAGTCTGGAAATTTGGGCT+GGG 0.521625 3_4:-7424410 Msa0488160:CDS
CCAGAATTGATTGATCGCCT+TGG 0.527310 3_4:+7424660 None:intergenic
GTAAACATTCAATATTTCCT+CGG 0.528220 3_4:+7424168 None:intergenic
AGCTATGCTGATGAAGGAAA+AGG 0.531287 3_4:+7424702 None:intergenic
GGCTGAAAGAATTGATGCTA+GGG 0.533185 3_4:-7426472 Msa0488160:CDS
ACAAAGTCAACAACCTTCCA+TGG 0.536142 3_4:+7424364 None:intergenic
TAACATCTACCTCACTCCTC+AGG 0.540088 3_4:-7424234 Msa0488160:CDS
AGGCTGAAAGAATTGATGCT+AGG 0.540112 3_4:-7426473 Msa0488160:CDS
GAGGGAATGATCTGCTTCAA+GGG 0.542159 3_4:-7426167 Msa0488160:CDS
TGTTGTGGATGAAAGATTGA+TGG 0.544678 3_4:+7424009 None:intergenic
AGTTTGATTTCATATTCAGT+TGG 0.545841 3_4:+7426378 None:intergenic
AGTGATTCATATTGCTTCCG+AGG 0.546777 3_4:-7424185 Msa0488160:CDS
CAAGTCAAGTACACCTATGT+TGG 0.548742 3_4:+7424303 None:intergenic
ATTCAACAATGGAAAGTCCA+TGG 0.553899 3_4:-7424381 Msa0488160:CDS
TGATCTGCTTCAAGGGCATA+CGG 0.554583 3_4:-7426160 Msa0488160:CDS
ATAAGTGTTGCTGCGGCAAG+AGG 0.559399 3_4:-7426186 Msa0488160:CDS
GCTTATTCTGGCTGTTCTAG+CGG 0.565805 3_4:-7424631 Msa0488160:CDS
CATTGAGCAACCCGAGAAGG+TGG 0.569290 3_4:-7424057 Msa0488160:CDS
TGTGTTTCATGGTAAGAATG+AGG 0.572647 3_4:-7426265 Msa0488160:CDS
AACAATGGAAAGTCCATGGA+AGG 0.572932 3_4:-7424377 Msa0488160:CDS
AAGATGAAGAAGCTCTCAGT+TGG 0.573928 3_4:-7426591 Msa0488160:CDS
ACACACCAGCGAATTGAAAG+AGG 0.578254 3_4:+7424821 None:intergenic
AGTGAGGTAGATGTTACATC+GGG 0.579813 3_4:+7424241 None:intergenic
ATGCATTGAGCAACCCGAGA+AGG 0.585187 3_4:-7424060 Msa0488160:CDS
GACGATGATGACGAACTACA+AGG 0.589561 3_4:-7426339 Msa0488160:CDS
GCAATGAATAACATACAAGA+TGG 0.590425 3_4:-7424901 Msa0488160:CDS
CTTTAGACATCTACACTATG+AGG 0.594856 3_4:-7423885 Msa0488160:CDS
CTGGTGTGTGCAAGAATTGG+AGG 0.595567 3_4:-7424807 Msa0488160:CDS
TAAGTGTTGCTGCGGCAAGA+GGG 0.604842 3_4:-7426185 Msa0488160:CDS
TGCCAAAAGCAAGCAAGACA+TGG 0.610086 3_4:+7424494 None:intergenic
GAGTGAGGTAGATGTTACAT+CGG 0.616275 3_4:+7424240 None:intergenic
ATTGAGCAACCCGAGAAGGT+GGG 0.616952 3_4:-7424056 Msa0488160:CDS
CCGAAAAGTTTATCACTCCA+AGG 0.620313 3_4:-7424677 Msa0488160:CDS
AAAGCACCAATCCAGCAAGT+AGG 0.620337 3_4:+7423904 None:intergenic
TTGAGCAACCCGAGAAGGTG+GGG 0.622323 3_4:-7424055 Msa0488160:CDS
CTGGGTTACATATTCAACAA+TGG 0.624667 3_4:-7424392 Msa0488160:CDS
AGAGTGTACGAGTTGTTGGA+CGG 0.625456 3_4:-7426438 Msa0488160:CDS
CCTCCAGTTCAGCTTGACAC+CGG 0.627356 3_4:-7426087 Msa0488160:intron
GTCACCGACAAGGCCAACAT+AGG 0.627828 3_4:-7424316 Msa0488160:CDS
ATCTACCTCACTCCTCAGGA+TGG 0.644112 3_4:-7424230 Msa0488160:CDS
AATTGATATAAGTGTTGCTG+CGG 0.644511 3_4:-7426193 Msa0488160:CDS
TAGAACTCGAGTTCCTCCAA+AGG 0.651017 3_4:-7423933 Msa0488160:CDS
TAGACATCTACACTATGAGG+TGG 0.658182 3_4:-7423882 Msa0488160:CDS
TATATACGTTGTCACCGACA+AGG 0.661708 3_4:-7424326 Msa0488160:CDS
CCGGTGTCAAGCTGAACTGG+AGG 0.668666 3_4:+7426087 None:intergenic
TACTCGCAGCAGTTAAACGT+AGG 0.669963 3_4:-7426554 Msa0488160:CDS
ACTAACCATCCTGAGGAGTG+AGG 0.672997 3_4:+7424225 None:intergenic
GCGGATATTTGATCATGACA+GGG 0.678093 3_4:-7424612 Msa0488160:CDS
TGGTGTGTGCAAGAATTGGA+GGG 0.700448 3_4:-7424806 Msa0488160:CDS
AACATGTAAAGTGTGTTTAG+GGG 0.701783 3_4:-7423990 Msa0488160:CDS
CGGATATTTGATCATGACAG+GGG 0.702309 3_4:-7424611 Msa0488160:CDS
CATCACAACTAACCATCCTG+AGG 0.720834 3_4:+7424218 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAATATATAAATAA+TGG + chr3_4:7424400-7424419 None:intergenic 0.0%
!! ATAAATATATAAATAATGGT+AGG + chr3_4:7424396-7424415 None:intergenic 10.0%
!! AAAAAAAAAAACATATCTTT+CGG - chr3_4:7425461-7425480 Msa0488160:intron 10.0%
!!! TGAGTTTTTAAAAATTGTTA+AGG - chr3_4:7424218-7424237 Msa0488160:CDS 15.0%
!!! TTCTAAAAATTTTATATCTG+TGG + chr3_4:7426177-7426196 None:intergenic 15.0%
!!! ATCTTTTCTACAAATTATGA+AGG - chr3_4:7423948-7423967 Msa0488160:CDS 20.0%
!! ATTTCGAAATTAAATCTTCA+TGG + chr3_4:7424038-7424057 None:intergenic 20.0%
!! AAAAATTGTTAAGGATTTCA+AGG - chr3_4:7424227-7424246 Msa0488160:CDS 20.0%
!! GCTATAAAGATTCAATAAAT+TGG - chr3_4:7424436-7424455 Msa0488160:CDS 20.0%
!!! ATAAGAAGAATTGACTTTAA+AGG + chr3_4:7425928-7425947 None:intergenic 20.0%
! TTTGAGAAAAGGGAAAAATA+TGG - chr3_4:7423925-7423944 Msa0488160:CDS 25.0%
! ACAAATTATGAAGGATTTCA+AGG - chr3_4:7423957-7423976 Msa0488160:CDS 25.0%
!! AGTTTGATTTCATATTCAGT+TGG + chr3_4:7424075-7424094 None:intergenic 25.0%
! ATATGAAATCAAACTTCCAT+TGG - chr3_4:7424080-7424099 Msa0488160:CDS 25.0%
! AAAGTAAAAGATGTGTTTCA+TGG - chr3_4:7424174-7424193 Msa0488160:CDS 25.0%
! GATTAAGTTTAACGATAAGT+TGG - chr3_4:7424501-7424520 Msa0488160:CDS 25.0%
!! ATCTTTGGAGAATTAAAAGT+AGG - chr3_4:7424617-7424636 Msa0488160:CDS 25.0%
!! TCTTTGGAGAATTAAAAGTA+GGG - chr3_4:7424618-7424637 Msa0488160:CDS 25.0%
!! TTCATGCATTTTATGTCTAT+AGG - chr3_4:7424649-7424668 Msa0488160:CDS 25.0%
!! AGTTTTTACAAGTGAACATT+AGG + chr3_4:7424677-7424696 None:intergenic 25.0%
!! TATTTCTTTTCTTCTGAACA+TGG - chr3_4:7424934-7424953 Msa0488160:intron 25.0%
!! TTCATGTATTTTATGTCCAT+GGG - chr3_4:7425011-7425030 Msa0488160:intron 25.0%
!!! TTTTAATTCCAAAGTTTCAC+AGG + chr3_4:7425075-7425094 None:intergenic 25.0%
! ATCACAACAATGACAATATT+AGG + chr3_4:7425518-7425537 None:intergenic 25.0%
! AAGATGGTTGTAAAATTTCT+TGG - chr3_4:7425565-7425584 Msa0488160:intron 25.0%
! AGATGGTTGTAAAATTTCTT+GGG - chr3_4:7425566-7425585 Msa0488160:intron 25.0%
! GGGAATTTCATAAAACTTAT+TGG - chr3_4:7425664-7425683 Msa0488160:intron 25.0%
! AACTTATTGGAAAAAGTTCT+TGG - chr3_4:7425677-7425696 Msa0488160:intron 25.0%
! TTTGAATAAGTAATGGTTCT+TGG + chr3_4:7425707-7425726 None:intergenic 25.0%
!! GAAGACTTTTGAATAAGTAA+TGG + chr3_4:7425714-7425733 None:intergenic 25.0%
! GTAAACATTCAATATTTCCT+CGG + chr3_4:7426285-7426304 None:intergenic 25.0%
!!! CATTGCATTATTTTATGCTT+CGG - chr3_4:7426355-7426374 Msa0488160:CDS 25.0%
!!! ATTGCATTATTTTATGCTTC+GGG - chr3_4:7426356-7426375 Msa0488160:CDS 25.0%
!! CTATCATGCTTAATGTATTT+TGG + chr3_4:7426500-7426519 None:intergenic 25.0%
TAGGTTTGGATTTGAGAAAA+GGG - chr3_4:7423915-7423934 Msa0488160:CDS 30.0%
! AATTGATATAAGTGTTGCTG+CGG - chr3_4:7424257-7424276 Msa0488160:CDS 30.0%
TTCTCTCAATACAATAACGA+TGG + chr3_4:7424463-7424482 None:intergenic 30.0%
AGAAGTGAGTGTAAGATTAA+GGG - chr3_4:7424479-7424498 Msa0488160:CDS 30.0%
!! AAGTTTAACGATAAGTTGGT+AGG - chr3_4:7424505-7424524 Msa0488160:CDS 30.0%
!! AGTTTAACGATAAGTTGGTA+GGG - chr3_4:7424506-7424525 Msa0488160:CDS 30.0%
TTCATGTATCAAACAGATGA+AGG - chr3_4:7424590-7424609 Msa0488160:CDS 30.0%
! CTTTGGAGAATTAAAAGTAG+GGG - chr3_4:7424619-7424638 Msa0488160:CDS 30.0%
CAGGTTTACAAAATATTGTC+TGG + chr3_4:7424739-7424758 None:intergenic 30.0%
ATGATAATTTCTTCGATTGC+AGG + chr3_4:7424758-7424777 None:intergenic 30.0%
ATATGACATGTATCAACCTT+AGG - chr3_4:7424776-7424795 Msa0488160:CDS 30.0%
!! TTTTATTCTAGAGACAGCAA+GGG + chr3_4:7424832-7424851 None:intergenic 30.0%
!! TTTTTATTCTAGAGACAGCA+AGG + chr3_4:7424833-7424852 None:intergenic 30.0%
AAACTAAAAAACACACAGAG+TGG + chr3_4:7424905-7424924 None:intergenic 30.0%
GAGCTAAATTTACGATAGAA+TGG - chr3_4:7424982-7425001 Msa0488160:intron 30.0%
! GTTCATGTATTTTATGTCCA+TGG - chr3_4:7425010-7425029 Msa0488160:intron 30.0%
GAGTTGGAAACAATAAAAGA+GGG + chr3_4:7425134-7425153 None:intergenic 30.0%
! TGAGTTGGAAACAATAAAAG+AGG + chr3_4:7425135-7425154 None:intergenic 30.0%
CTCGTATAAATATGAGTTGT+TGG - chr3_4:7425204-7425223 Msa0488160:intron 30.0%
AACGCTTTCAATAGCAATAT+TGG + chr3_4:7425241-7425260 None:intergenic 30.0%
!!! TTTTTTTCGACCTATTCTGA+AGG - chr3_4:7425306-7425325 Msa0488160:intron 30.0%
!!! TTTTTTCGACCTATTCTGAA+GGG - chr3_4:7425307-7425326 Msa0488160:intron 30.0%
AGAATGTTAATTTCCATGTG+AGG - chr3_4:7425381-7425400 Msa0488160:intron 30.0%
GAATGTTAATTTCCATGTGA+GGG - chr3_4:7425382-7425401 Msa0488160:intron 30.0%
ACAACAATGACAATATTAGG+TGG + chr3_4:7425515-7425534 None:intergenic 30.0%
GCAATGAATAACATACAAGA+TGG - chr3_4:7425549-7425568 Msa0488160:intron 30.0%
GGAAAAGGATTTCTTATCAT+TGG + chr3_4:7425736-7425755 None:intergenic 30.0%
TCCATTTACAAGAAGAAAGA+AGG - chr3_4:7425887-7425906 Msa0488160:intron 30.0%
ACCTTCTTTCTTCTTGTAAA+TGG + chr3_4:7425891-7425910 None:intergenic 30.0%
! AACCATGAATTTTGTCAAGA+TGG - chr3_4:7426319-7426338 Msa0488160:CDS 30.0%
TTCCATCTTGACAAAATTCA+TGG + chr3_4:7426324-7426343 None:intergenic 30.0%
! TTTTGTCAAGATGGAAACTT+TGG - chr3_4:7426328-7426347 Msa0488160:CDS 30.0%
TTTGTCAAGATGGAAACTTT+GGG - chr3_4:7426329-7426348 Msa0488160:CDS 30.0%
!! TTGCATTATTTTATGCTTCG+GGG - chr3_4:7426357-7426376 Msa0488160:CDS 30.0%
TAAACACACTTTACATGTTG+TGG + chr3_4:7426459-7426478 None:intergenic 30.0%
ACAACATGTAAAGTGTGTTT+AGG - chr3_4:7426458-7426477 Msa0488160:CDS 30.0%
CAACATGTAAAGTGTGTTTA+GGG - chr3_4:7426459-7426478 Msa0488160:CDS 30.0%
AACATGTAAAGTGTGTTTAG+GGG - chr3_4:7426460-7426479 Msa0488160:CDS 30.0%
GTAGGTTTGGATTTGAGAAA+AGG - chr3_4:7423914-7423933 Msa0488160:CDS 35.0%
! ATTAAGAGTGTACGAGTTGT+TGG - chr3_4:7424008-7424027 Msa0488160:CDS 35.0%
TGTGTTTCATGGTAAGAATG+AGG - chr3_4:7424185-7424204 Msa0488160:CDS 35.0%
ATTGTTAAGGATTTCAAGGC+TGG - chr3_4:7424231-7424250 Msa0488160:CDS 35.0%
!! AGGGCATACGGATTTAATTT+TGG - chr3_4:7424302-7424321 Msa0488160:CDS 35.0%
!! GGGCATACGGATTTAATTTT+GGG - chr3_4:7424303-7424322 Msa0488160:CDS 35.0%
TCGATATTTCTTTGGCAAGA+AGG + chr3_4:7424337-7424356 None:intergenic 35.0%
GGTGTGATTCGATATTTCTT+TGG + chr3_4:7424345-7424364 None:intergenic 35.0%
AATAATGGTAGGCTACTAAC+CGG + chr3_4:7424385-7424404 None:intergenic 35.0%
GAGAAGTGAGTGTAAGATTA+AGG - chr3_4:7424478-7424497 Msa0488160:CDS 35.0%
ATATTTCCCCTAAACCTTGA+AGG + chr3_4:7424533-7424552 None:intergenic 35.0%
ACAGATGAAGGCTATATCTT+TGG - chr3_4:7424602-7424621 Msa0488160:CDS 35.0%
CAAAATATTGTCTGGATGCA+AGG + chr3_4:7424731-7424750 None:intergenic 35.0%
TGAGTGTCAAATGAATCCTA+AGG + chr3_4:7424795-7424814 None:intergenic 35.0%
CTATCAAGACAGTTCTTATC+AGG + chr3_4:7425049-7425068 None:intergenic 35.0%
GATAGTTTCCTGTGAAACTT+TGG - chr3_4:7425064-7425083 Msa0488160:intron 35.0%
! TCATAGTTAGTCTCATCCTT+AGG - chr3_4:7425105-7425124 Msa0488160:intron 35.0%
CAATAAAAGAGGGAATCCTA+AGG + chr3_4:7425124-7425143 None:intergenic 35.0%
ATACGAGAAAGAGACAACAA+GGG + chr3_4:7425191-7425210 None:intergenic 35.0%
TATACGAGAAAGAGACAACA+AGG + chr3_4:7425192-7425211 None:intergenic 35.0%
GCTTTCAATAGCAATATTGG+TGG + chr3_4:7425238-7425257 None:intergenic 35.0%
TTGTCATTGTTGTGATACAC+AGG - chr3_4:7425522-7425541 Msa0488160:intron 35.0%
TGTCATTGTTGTGATACACA+GGG - chr3_4:7425523-7425542 Msa0488160:intron 35.0%
! CCTTGGAGTGATAAACTTTT+CGG + chr3_4:7425776-7425795 None:intergenic 35.0%
AGTTTGTATGTCTATCAGTC+TGG - chr3_4:7426026-7426045 Msa0488160:intron 35.0%
TGTCTATCAGTCTGGAAATT+TGG - chr3_4:7426034-7426053 Msa0488160:intron 35.0%
GTCTATCAGTCTGGAAATTT+GGG - chr3_4:7426035-7426054 Msa0488160:intron 35.0%
CTGGGTTACATATTCAACAA+TGG - chr3_4:7426058-7426077 Msa0488160:intron 35.0%
ATTCAACAATGGAAAGTCCA+TGG - chr3_4:7426069-7426088 Msa0488160:intron 35.0%
!! TGCATTATTTTATGCTTCGG+GGG - chr3_4:7426358-7426377 Msa0488160:CDS 35.0%
TGTTGTGGATGAAAGATTGA+TGG + chr3_4:7426444-7426463 None:intergenic 35.0%
CTTTAGACATCTACACTATG+AGG - chr3_4:7426565-7426584 Msa0488160:CDS 35.0%
AGGCTGAAAGAATTGATGCT+AGG - chr3_4:7423977-7423996 Msa0488160:CDS 40.0%
GGCTGAAAGAATTGATGCTA+GGG - chr3_4:7423978-7423997 Msa0488160:CDS 40.0%
! CAGGATACATTAGTTTCCCA+TGG + chr3_4:7425030-7425049 None:intergenic 40.0%
! TAGCAATATTGGTGGATGCT+AGG + chr3_4:7425230-7425249 None:intergenic 40.0%
GCGTTATGAACACTCACATT+AGG - chr3_4:7425256-7425275 Msa0488160:intron 40.0%
TTTCCATGTGAGGGTGAAAA+TGG - chr3_4:7425391-7425410 Msa0488160:intron 40.0%
GTCATTGTTGTGATACACAG+GGG - chr3_4:7425524-7425543 Msa0488160:intron 40.0%
GTCATCGAAATCTAGATCTC+TGG + chr3_4:7425610-7425629 None:intergenic 40.0%
AGCTATGCTGATGAAGGAAA+AGG + chr3_4:7425751-7425770 None:intergenic 40.0%
CCGAAAAGTTTATCACTCCA+AGG - chr3_4:7425773-7425792 Msa0488160:intron 40.0%
AGCGGATATTTGATCATGAC+AGG - chr3_4:7425837-7425856 Msa0488160:intron 40.0%
GCGGATATTTGATCATGACA+GGG - chr3_4:7425838-7425857 Msa0488160:intron 40.0%
CGGATATTTGATCATGACAG+GGG - chr3_4:7425839-7425858 Msa0488160:intron 40.0%
! TACCATGTCTTGCTTGCTTT+TGG - chr3_4:7425954-7425973 Msa0488160:intron 40.0%
GTCGCTTCATGTAAAAGTTC+TGG - chr3_4:7426002-7426021 Msa0488160:intron 40.0%
AACAATGGAAAGTCCATGGA+AGG - chr3_4:7426073-7426092 Msa0488160:intron 40.0%
ACAAAGTCAACAACCTTCCA+TGG + chr3_4:7426089-7426108 None:intergenic 40.0%
TATATACGTTGTCACCGACA+AGG - chr3_4:7426124-7426143 Msa0488160:CDS 40.0%
CAAGTCAAGTACACCTATGT+TGG + chr3_4:7426150-7426169 None:intergenic 40.0%
AGTGAGGTAGATGTTACATC+GGG + chr3_4:7426212-7426231 None:intergenic 40.0%
GAGTGAGGTAGATGTTACAT+CGG + chr3_4:7426213-7426232 None:intergenic 40.0%
AGTGATTCATATTGCTTCCG+AGG - chr3_4:7426265-7426284 Msa0488160:CDS 40.0%
TAGACATCTACACTATGAGG+TGG - chr3_4:7426568-7426587 Msa0488160:CDS 40.0%
TACTCGCAGCAGTTAAACGT+AGG - chr3_4:7423896-7423915 Msa0488160:CDS 45.0%
GCAGCAGTTAAACGTAGGTT+TGG - chr3_4:7423901-7423920 Msa0488160:CDS 45.0%
AGAGTGTACGAGTTGTTGGA+CGG - chr3_4:7424012-7424031 Msa0488160:CDS 45.0%
! GACGATGATGACGAACTACA+AGG - chr3_4:7424111-7424130 Msa0488160:CDS 45.0%
AGAGGGAATGATCTGCTTCA+AGG - chr3_4:7424282-7424301 Msa0488160:CDS 45.0%
GAGGGAATGATCTGCTTCAA+GGG - chr3_4:7424283-7424302 Msa0488160:CDS 45.0%
! TGATCTGCTTCAAGGGCATA+CGG - chr3_4:7424290-7424309 Msa0488160:CDS 45.0%
!! TAAGTTGGTAGGGTCCTTCA+AGG - chr3_4:7424516-7424535 Msa0488160:CDS 45.0%
GTAGGGTCCTTCAAGGTTTA+GGG - chr3_4:7424523-7424542 Msa0488160:CDS 45.0%
TAGGGTCCTTCAAGGTTTAG+GGG - chr3_4:7424524-7424543 Msa0488160:CDS 45.0%
AGAGACAGCAAGGGAGAAAT+TGG + chr3_4:7424823-7424842 None:intergenic 45.0%
! GGATGAGAAGTATGCTGAGT+TGG + chr3_4:7425150-7425169 None:intergenic 45.0%
GGGACATAGTGAGTATGAGT+TGG + chr3_4:7425171-7425190 None:intergenic 45.0%
ACTCGTCTTCCCTTCAGAAT+AGG + chr3_4:7425319-7425338 None:intergenic 45.0%
!! TAGCCATTTTCACCCTCACA+TGG + chr3_4:7425397-7425416 None:intergenic 45.0%
GATGACCTCTTTCAATTCGC+TGG - chr3_4:7425624-7425643 Msa0488160:intron 45.0%
ACACACCAGCGAATTGAAAG+AGG + chr3_4:7425632-7425651 None:intergenic 45.0%
TGGTGTGTGCAAGAATTGGA+GGG - chr3_4:7425644-7425663 Msa0488160:intron 45.0%
CCAGAATTGATTGATCGCCT+TGG + chr3_4:7425793-7425812 None:intergenic 45.0%
CCAAGGCGATCAATCAATTC+TGG - chr3_4:7425790-7425809 Msa0488160:intron 45.0%
TTCTGGCACGTTGCTTATTC+TGG - chr3_4:7425807-7425826 Msa0488160:intron 45.0%
! GCTTATTCTGGCTGTTCTAG+CGG - chr3_4:7425819-7425838 Msa0488160:intron 45.0%
TGCCAAAAGCAAGCAAGACA+TGG + chr3_4:7425959-7425978 None:intergenic 45.0%
!! GTCTTGCTTGCTTTTGGCAA+AGG - chr3_4:7425960-7425979 Msa0488160:intron 45.0%
ATCAGTCTGGAAATTTGGGC+TGG - chr3_4:7426039-7426058 Msa0488160:intron 45.0%
TCAGTCTGGAAATTTGGGCT+GGG - chr3_4:7426040-7426059 Msa0488160:intron 45.0%
!! TACACCTATGTTGGCCTTGT+CGG + chr3_4:7426141-7426160 None:intergenic 45.0%
TAACATCTACCTCACTCCTC+AGG - chr3_4:7426216-7426235 Msa0488160:CDS 45.0%
CATCACAACTAACCATCCTG+AGG + chr3_4:7426235-7426254 None:intergenic 45.0%
! CTCAGGATGGTTAGTTGTGA+TGG - chr3_4:7426233-7426252 Msa0488160:CDS 45.0%
TTTCAAAACCCCACCTTCTC+GGG + chr3_4:7426406-7426425 None:intergenic 45.0%
CTTTCAAAACCCCACCTTCT+CGG + chr3_4:7426407-7426426 None:intergenic 45.0%
TAGAACTCGAGTTCCTCCAA+AGG - chr3_4:7426517-7426536 Msa0488160:CDS 45.0%
! AAGTAGGCGTTTTCCTTTGG+AGG + chr3_4:7426533-7426552 None:intergenic 45.0%
! AGCAAGTAGGCGTTTTCCTT+TGG + chr3_4:7426536-7426555 None:intergenic 45.0%
AAAGGAAAACGCCTACTTGC+TGG - chr3_4:7426535-7426554 Msa0488160:CDS 45.0%
! AAAACGCCTACTTGCTGGAT+TGG - chr3_4:7426540-7426559 Msa0488160:CDS 45.0%
! AAAGCACCAATCCAGCAAGT+AGG + chr3_4:7426549-7426568 None:intergenic 45.0%
TCATCGTCGTCACGATCCAA+TGG + chr3_4:7424099-7424118 None:intergenic 50.0%
! ATAAGTGTTGCTGCGGCAAG+AGG - chr3_4:7424264-7424283 Msa0488160:CDS 50.0%
! TAAGTGTTGCTGCGGCAAGA+GGG - chr3_4:7424265-7424284 Msa0488160:CDS 50.0%
! TAACCGGTGTCAAGCTGAAC+TGG + chr3_4:7424369-7424388 None:intergenic 50.0%
GGTAGGGTCCTTCAAGGTTT+AGG - chr3_4:7424522-7424541 Msa0488160:CDS 50.0%
TCGCTGGTGTGTGCAAGAAT+TGG - chr3_4:7425640-7425659 Msa0488160:intron 50.0%
CTGGTGTGTGCAAGAATTGG+AGG - chr3_4:7425643-7425662 Msa0488160:intron 50.0%
TCGGTCAGCTATGCTGATGA+AGG + chr3_4:7425757-7425776 None:intergenic 50.0%
! TGCTTTTGGCAAAGGCTCAG+AGG - chr3_4:7425968-7425987 Msa0488160:intron 50.0%
ATCTACCTCACTCCTCAGGA+TGG - chr3_4:7426220-7426239 Msa0488160:CDS 50.0%
ACTAACCATCCTGAGGAGTG+AGG + chr3_4:7426228-7426247 None:intergenic 50.0%
ATGCATTGAGCAACCCGAGA+AGG - chr3_4:7426390-7426409 Msa0488160:CDS 50.0%
ATTGAGCAACCCGAGAAGGT+GGG - chr3_4:7426394-7426413 Msa0488160:CDS 50.0%
CCTCCAGTTCAGCTTGACAC+CGG - chr3_4:7424363-7424382 Msa0488160:CDS 55.0%
GTCACCGACAAGGCCAACAT+AGG - chr3_4:7426134-7426153 Msa0488160:CDS 55.0%
CATTGAGCAACCCGAGAAGG+TGG - chr3_4:7426393-7426412 Msa0488160:CDS 55.0%
TTGAGCAACCCGAGAAGGTG+GGG - chr3_4:7426395-7426414 Msa0488160:CDS 55.0%
! CCGGTGTCAAGCTGAACTGG+AGG + chr3_4:7424366-7424385 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 7423862 7426610 7423862 ID=Msa0488160;Name=Msa0488160
chr3_4 mRNA 7423862 7426610 7423862 ID=Msa0488160-mRNA-1;Parent=Msa0488160;Name=Msa0488160-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|1|1|2|0|529
chr3_4 exon 7426088 7426610 7426088 ID=Msa0488160-mRNA-1:exon:2621;Parent=Msa0488160-mRNA-1
chr3_4 exon 7423862 7424928 7423862 ID=Msa0488160-mRNA-1:exon:2620;Parent=Msa0488160-mRNA-1
chr3_4 CDS 7426088 7426610 7426088 ID=Msa0488160-mRNA-1:cds;Parent=Msa0488160-mRNA-1
chr3_4 CDS 7423862 7424928 7423862 ID=Msa0488160-mRNA-1:cds;Parent=Msa0488160-mRNA-1
Gene Sequence

>Msa0488160

ATGAAGAAGCTCTCAGTTGGTGATGCATTATCGTTACTCGCAGCAGTTAAACGTAGGTTTGGATTTGAGAAAAGGGAAAAATATGGATCTTTTCTACAAATTATGAAGGATTTCAAGGCTGAAAGAATTGATGCTAGGGATGTCAAATTAAGAGTGTACGAGTTGTTGGACGGCCATGAAGATTTAATTTCGAAATTCAACATCTTCTTGCCAACTGAATATGAAATCAAACTTCCATTGGATCGTGACGACGATGATGACGAACTACAAGGTCATATGTTAGAGACAAAAGATGCATTTGCATTTCTCGAGAAAGTAAAAGATGTGTTTCATGGTAAGAATGAGGAAAAGTATAATGAGTTTTTAAAAATTGTTAAGGATTTCAAGGCTGGAAGAATTGATATAAGTGTTGCTGCGGCAAGAGGGAATGATCTGCTTCAAGGGCATACGGATTTAATTTTGGGATTCAACGCCTTCTTGCCAAAGAAATATCGAATCACACCTCCAGTTCAGCTTGACACCGGGGAAGCAATGAATAACATACAAGATGGTTGTAAAATTTCTTGGGATATGCTTGATCTCATTTCCAGAGATCTAGATTTCGATGACCTCTTTCAATTCGCTGGTGTGTGCAAGAATTGGAGGGAATTTCATAAAACTTATTGGAAAAAGTTCTTGGCATTCCAAGAACCATTACTTATTCAAAAGTCTTCCAATGATAAGAAATCCTTTTCCTTCATCAGCATAGCTGACCGAAAAGTTTATCACTCCAAGGCGATCAATCAATTCTGGCACGTTGCTTATTCTGGCTGTTCTAGCGGATATTTGATCATGACAGGGGACAATAATTCTTTTCTTCTATTGAATCCATTTACAAGAAGAAAGAAGGTAATCAATACATCAACCTTTAAAGTCAATTCTTCTTATTTTGCTTACCATGTCTTGCTTGCTTTTGGCAAAGGCTCAGAGGAATTTGTCTTAGTCGCTTCATGTAAAAGTTCTGGTAGTTTGTATGTCTATCAGTCTGGAAATTTGGGCTGGGTTACATATTCAACAATGGAAAGTCCATGGAAGGTTGTTGACTTTGTTGTTTTGCATCATACTATATACGTTGTCACCGACAAGGCCAACATAGGTGTACTTGACTTGAATTCCACAGATATAAAATTTTTAGAACTGAAGAGTACACCCGATGTAACATCTACCTCACTCCTCAGGATGGTTAGTTGTGATGGACAACTTTTAGTGATTCATATTGCTTCCGAGGAAATATTGAATGTTTACAAGATAGACTTCTCAACCATGAATTTTGTCAAGATGGAAACTTTGGGTGACATTGCATTATTTTATGCTTCGGGGGAATACTTCTATGCATTGAGCAACCCGAGAAGGTGGGGTTTTGAAAGCAACTCTTTGTATGCCATCAATCTTTCATCCACAACATGTAAAGTGTGTTTAGGGGATGATAACGAACTGCCAAAATACATTAAGCATGATAGAACTCGAGTTCCTCCAAAGGAAAACGCCTACTTGCTGGATTGGTGCTTTAGACATCTACACTATGAGGTGGATCTTTCTCCAGTTGAGTAA
Protein sequence

>Msa0488160

MKKLSVGDALSLLAAVKRRFGFEKREKYGSFLQIMKDFKAERIDARDVKLRVYELLDGHEDLISKFNIFLPTEYEIKLPLDRDDDDDELQGHMLETKDAFAFLEKVKDVFHGKNEEKYNEFLKIVKDFKAGRIDISVAAARGNDLLQGHTDLILGFNAFLPKKYRITPPVQLDTGEAMNNIQDGCKISWDMLDLISRDLDFDDLFQFAGVCKNWREFHKTYWKKFLAFQEPLLIQKSSNDKKSFSFISIADRKVYHSKAINQFWHVAYSGCSSGYLIMTGDNNSFLLLNPFTRRKKVINTSTFKVNSSYFAYHVLLAFGKGSEEFVLVASCKSSGSLYVYQSGNLGWVTYSTMESPWKVVDFVVLHHTIYVVTDKANIGVLDLNSTDIKFLELKSTPDVTSTSLLRMVSCDGQLLVIHIASEEILNVYKIDFSTMNFVKMETLGDIALFYASGEYFYALSNPRRWGFESNSLYAINLSSTTCKVCLGDDNELPKYIKHDRTRVPPKENAYLLDWCFRHLHYEVDLSPVE*