AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0489550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0489550 MtrunA17_Chr3g0079691 98.011 704 12 1 1 702 1 704 0.0 1427
Msa0489550 MtrunA17_Chr3g0101131 43.943 487 197 14 109 573 60 492 7.92e-103 327
Msa0489550 MtrunA17_Chr7g0249311 44.937 474 200 13 138 564 2 461 5.23e-101 324
Msa0489550 MtrunA17_Chr7g0249311 51.389 72 34 1 280 350 392 463 5.59e-14 75.5
Msa0489550 MtrunA17_Chr5g0432161 42.827 467 182 13 112 559 85 485 1.82e-89 291
Msa0489550 MtrunA17_Chr5g0445311 40.638 470 182 12 109 561 41 430 4.69e-89 289
Msa0489550 MtrunA17_Chr5g0445311 48.148 81 39 2 495 575 200 277 1.26e-13 74.3
Msa0489550 MtrunA17_Chr7g0218081 51.877 293 100 8 278 566 226 481 7.35e-85 277
Msa0489550 MtrunA17_Chr7g0249301 49.231 325 100 8 273 557 55 354 7.21e-84 270
Msa0489550 MtrunA17_Chr7g0249301 46.078 102 43 5 494 586 61 159 1.34e-14 76.3
Msa0489550 MtrunA17_Chr5g0418191 49.662 296 98 6 278 571 149 395 9.85e-82 266
Msa0489550 MtrunA17_Chr5g0418191 46.535 101 43 5 495 587 151 248 3.45e-16 81.6
Msa0489550 MtrunA17_Chr7g0243891 40.132 456 204 10 112 565 56 444 2.25e-81 268
Msa0489550 MtrunA17_Chr7g0243891 48.276 87 38 3 495 577 216 299 7.97e-16 81.3
Msa0489550 MtrunA17_Chr7g0263531 39.241 395 172 10 176 554 78 420 3.82e-70 235
Msa0489550 MtrunA17_Chr4g0004911 67.717 127 34 3 436 557 274 398 3.07e-47 174
Msa0489550 MtrunA17_Chr4g0004911 34.263 251 116 7 102 343 38 248 3.77e-26 112
Msa0489550 MtrunA17_Chr4g0004911 47.778 90 38 2 467 556 165 245 6.36e-17 84.3
Msa0489550 MtrunA17_Chr4g0004911 55.000 60 26 1 280 338 336 395 4.67e-13 72.0
Msa0489550 MtrunA17_Chr3g0106491 60.870 138 51 1 425 559 292 429 1.70e-45 170
Msa0489550 MtrunA17_Chr3g0106491 40.171 234 108 6 110 343 60 261 1.32e-35 141
Msa0489550 MtrunA17_Chr3g0106491 54.545 77 26 3 486 556 185 258 4.41e-15 78.6
Msa0489550 MtrunA17_Chr3g0106491 55.556 72 30 2 280 350 365 435 2.71e-14 76.3
Msa0489550 MtrunA17_Chr4g0042831 56.429 140 51 2 433 571 224 354 1.29e-41 156
Msa0489550 MtrunA17_Chr4g0042831 70.312 64 18 1 280 342 145 208 2.13e-23 103
Msa0489550 MtrunA17_Chr4g0042831 60.000 60 23 1 280 338 278 337 2.68e-14 75.5
Msa0489550 MtrunA17_Chr4g0042831 53.425 73 32 1 495 567 145 215 4.31e-14 74.7
Msa0489550 MtrunA17_Chr1g0188941 63.095 84 31 0 471 554 27 110 2.42e-34 126
Msa0489550 MtrunA17_Chr1g0188941 51.613 62 29 1 280 340 51 112 3.18e-15 72.4
Msa0489550 MtrunA17_Chr8g0335811 65.789 76 26 0 476 551 135 210 3.95e-30 119
Msa0489550 MtrunA17_Chr8g0335811 61.404 57 21 1 280 335 154 210 1.13e-16 79.7
Msa0489550 MtrunA17_Chr5g0447701 57.000 100 42 1 459 557 215 314 2.68e-29 120
Msa0489550 MtrunA17_Chr5g0447701 61.667 60 23 0 279 338 91 150 6.77e-20 92.4
Msa0489550 MtrunA17_Chr5g0447701 43.636 110 47 5 246 349 220 320 3.02e-14 75.1
Msa0489550 MtrunA17_Chr5g0447701 50.000 64 31 1 493 556 90 152 1.75e-11 66.6
Msa0489550 MtrunA17_Chr7g0270191 60.465 86 34 0 479 564 129 214 3.04e-28 115
Msa0489550 MtrunA17_Chr7g0270191 57.353 68 28 1 280 346 145 212 1.75e-17 83.6
Msa0489550 MtrunA17_Chr2g0294231 65.385 78 27 0 479 556 187 264 1.17e-27 115
Msa0489550 MtrunA17_Chr2g0294231 57.812 64 26 1 280 342 203 266 4.63e-17 84.0
Msa0489550 MtrunA17_Chr3g0129361 62.162 74 28 0 478 551 127 200 1.32e-27 111
Msa0489550 MtrunA17_Chr3g0129361 56.140 57 24 1 280 335 144 200 1.46e-14 73.6
Msa0489550 MtrunA17_Chr4g0051881 64.474 76 27 0 481 556 164 239 1.45e-27 114
Msa0489550 MtrunA17_Chr4g0051881 64.062 64 22 1 280 342 178 241 7.80e-19 88.6
Msa0489550 MtrunA17_Chr5g0418781 64.474 76 27 0 476 551 105 180 3.31e-27 112
Msa0489550 MtrunA17_Chr5g0418781 49.398 83 39 2 256 335 98 180 3.27e-17 82.4
Msa0489550 MtrunA17_Chr1g0194481 59.036 83 34 0 479 561 142 224 1.67e-26 110
Msa0489550 MtrunA17_Chr1g0194481 54.054 74 33 1 280 352 158 231 1.35e-18 87.4
Msa0489550 MtrunA17_Chr4g0074001 50.485 103 50 1 456 557 319 421 3.18e-26 113
Msa0489550 MtrunA17_Chr4g0074001 50.667 75 32 2 272 345 355 425 3.99e-16 82.0
Msa0489550 MtrunA17_Chr4g0074001 52.632 76 33 2 272 346 178 251 9.04e-16 80.9
Msa0489550 MtrunA17_Chr8g0383351 61.333 75 28 1 478 551 142 216 4.06e-26 107
Msa0489550 MtrunA17_Chr8g0383351 56.140 57 24 1 280 335 160 216 9.40e-15 74.3
Msa0489550 MtrunA17_Chr5g0443131 60.526 76 30 0 481 556 143 218 6.58e-26 108
Msa0489550 MtrunA17_Chr5g0443131 59.375 64 25 1 280 342 157 220 6.66e-17 82.4
Msa0489550 MtrunA17_Chr8g0383251 50.000 88 44 0 482 569 95 182 2.38e-25 103
Msa0489550 MtrunA17_Chr8g0383251 38.017 121 63 3 239 353 68 182 1.52e-12 66.6
Msa0489550 MtrunA17_Chr1g0150801 56.627 83 34 1 471 551 76 158 2.70e-25 102
Msa0489550 MtrunA17_Chr1g0150801 51.724 58 27 1 280 336 102 159 9.13e-14 69.7
Msa0489550 MtrunA17_Chr7g0224801 64.706 68 24 0 486 553 84 151 6.91e-25 102
Msa0489550 MtrunA17_Chr7g0224801 53.448 58 26 1 280 336 93 150 1.40e-15 75.1
Msa0489550 MtrunA17_Chr8g0386241 49.495 99 48 1 461 559 71 167 1.34e-24 101
Msa0489550 MtrunA17_Chr8g0386241 36.752 117 62 4 224 336 52 160 4.33e-15 73.9
Msa0489550 MtrunA17_Chr4g0075201 48.039 102 52 1 456 556 228 329 3.87e-24 106
Msa0489550 MtrunA17_Chr4g0075201 41.935 93 52 2 249 339 236 328 1.37e-14 77.0
Msa0489550 MtrunA17_Chr7g0248721 48.598 107 48 2 445 551 97 196 1.48e-23 99.8
Msa0489550 MtrunA17_Chr7g0248721 45.918 98 38 4 252 336 102 197 1.77e-16 79.0
Msa0489550 MtrunA17_Chr2g0288871 38.411 151 86 2 411 554 215 365 2.34e-23 104
Msa0489550 MtrunA17_Chr2g0288871 44.086 93 50 2 249 339 274 366 1.89e-16 83.2
Msa0489550 MtrunA17_Chr3g0129321 48.387 93 48 0 481 573 104 196 2.73e-23 98.6
Msa0489550 MtrunA17_Chr3g0129321 55.000 60 26 1 280 338 118 177 2.85e-14 72.4
Msa0489550 MtrunA17_Chr7g0270831 50.000 92 44 2 478 567 199 290 2.83e-23 103
Msa0489550 MtrunA17_Chr7g0270831 54.098 61 26 2 281 339 217 277 5.72e-14 74.7
Msa0489550 MtrunA17_Chr1g0189391 42.143 140 71 5 439 570 36 173 4.47e-23 101
Msa0489550 MtrunA17_Chr2g0322391 53.571 84 38 1 474 556 328 411 1.11e-22 102
Msa0489550 MtrunA17_Chr2g0322391 42.683 82 44 3 281 360 350 430 3.26e-12 69.7
Msa0489550 MtrunA17_Chr4g0068541 52.381 84 40 0 479 562 192 275 1.11e-22 101
Msa0489550 MtrunA17_Chr4g0068541 52.174 69 32 1 280 347 208 276 1.17e-15 79.7
Msa0489550 MtrunA17_Chr3g0099641 52.564 78 36 1 478 554 234 311 2.69e-22 100
Msa0489550 MtrunA17_Chr3g0099641 34.959 123 76 4 240 360 212 332 5.71e-14 75.1
Msa0489550 MtrunA17_Chr4g0051181 55.128 78 34 1 479 555 227 304 3.31e-22 100
Msa0489550 MtrunA17_Chr4g0051181 51.667 60 27 2 281 338 244 303 4.20e-12 68.9
Msa0489550 MtrunA17_Chr2g0302391 30.894 246 136 9 362 581 62 299 2.14e-21 97.4
Msa0489550 MtrunA17_Chr2g0302391 39.362 94 54 3 251 342 183 275 4.55e-13 72.0
Msa0489550 MtrunA17_Chr4g0060271 51.948 77 36 1 479 554 239 315 2.59e-21 98.6
Msa0489550 MtrunA17_Chr4g0060271 39.000 100 56 4 244 338 216 315 5.19e-12 69.3
Msa0489550 MtrunA17_Chr4g0025061 48.315 89 45 1 469 556 334 422 3.93e-21 98.2
Msa0489550 MtrunA17_Chr4g0025061 43.750 64 34 2 281 342 361 424 6.52e-11 65.5
Msa0489550 MtrunA17_Chr6g0485431 38.732 142 75 3 425 554 73 214 4.84e-21 95.5
Msa0489550 MtrunA17_Chr6g0485431 46.154 65 33 2 281 343 155 219 2.05e-11 66.2
Msa0489550 MtrunA17_Chr5g0432071 60.938 64 25 0 280 343 104 167 5.97e-21 92.0
Msa0489550 MtrunA17_Chr5g0432071 53.226 62 28 1 495 556 104 164 6.47e-14 71.2
Msa0489550 MtrunA17_Chr4g0053281 48.864 88 41 2 476 562 250 334 1.92e-20 93.2
Msa0489550 MtrunA17_Chr4g0053281 50.877 57 26 2 281 335 267 323 9.67e-12 67.0
Msa0489550 MtrunA17_Chr1g0147881 52.439 82 38 1 476 556 243 324 5.47e-20 92.0
Msa0489550 MtrunA17_Chr1g0147881 39.326 89 51 3 249 335 232 319 1.91e-12 69.3
Msa0489550 MtrunA17_Chr7g0216891 45.263 95 47 2 466 559 194 284 6.11e-20 94.4
Msa0489550 MtrunA17_Chr7g0216891 47.826 69 33 3 271 336 209 277 2.21e-11 67.0
Msa0489550 MtrunA17_Chr5g0447711 45.161 93 48 1 472 561 204 296 7.57e-20 90.9
Msa0489550 MtrunA17_Chr5g0447711 50.847 59 29 0 280 338 83 141 4.53e-14 73.9
Msa0489550 MtrunA17_Chr4g0025051 52.632 76 35 1 482 556 322 397 2.22e-19 92.4
Msa0489550 MtrunA17_Chr7g0238921 46.226 106 44 3 495 593 124 223 2.31e-19 89.7
Msa0489550 MtrunA17_Chr7g0238921 51.429 70 33 1 271 339 115 184 6.61e-14 73.6
Msa0489550 MtrunA17_Chr5g0401821 47.368 95 39 2 460 553 174 258 6.35e-19 87.4
Msa0489550 MtrunA17_Chr5g0401821 36.782 87 52 3 251 335 171 256 3.07e-11 64.7
Msa0489550 MtrunA17_Chr2g0333851 42.553 94 38 2 478 555 137 230 2.42e-18 86.7
Msa0489550 MtrunA17_Chr2g0333851 49.180 61 29 2 280 338 169 229 4.67e-12 67.8
Msa0489550 MtrunA17_Chr3g0136961 52.055 73 32 2 482 551 123 195 3.42e-18 85.9
Msa0489550 MtrunA17_Chr3g0136961 50.000 62 29 2 276 335 134 195 2.65e-12 68.2
Msa0489550 MtrunA17_Chr4g0071521 48.387 93 37 3 460 551 220 302 3.59e-18 86.3
Msa0489550 MtrunA17_Chr4g0071521 36.782 87 52 3 251 335 217 302 1.84e-12 68.9
Msa0489550 MtrunA17_Chr2g0284321 53.030 66 29 2 277 340 32 97 8.42e-17 80.1
Msa0489550 MtrunA17_Chr2g0284321 46.667 75 38 2 496 568 36 110 5.19e-14 72.0
Msa0489550 MtrunA17_Chr1g0150271 46.575 73 38 1 483 554 89 161 1.06e-16 80.5
Msa0489550 MtrunA17_Chr1g0150271 41.333 75 35 3 266 338 94 161 7.89e-11 63.2
Msa0489550 MtrunA17_Chr4g0001361 53.968 63 28 1 493 554 160 222 1.66e-16 81.3
Msa0489550 MtrunA17_Chr4g0001361 50.000 66 31 2 276 339 158 223 3.78e-14 73.9
Msa0489550 MtrunA17_Chr1g0184691 49.351 77 38 1 476 551 274 350 1.83e-16 81.6
Msa0489550 MtrunA17_Chr1g0184691 52.459 61 27 2 281 339 294 354 4.13e-12 68.6
Msa0489550 MtrunA17_Chr4g0024391 37.838 111 66 2 449 556 181 291 3.00e-16 82.0
Msa0489550 MtrunA17_Chr7g0270051 53.030 66 30 1 496 560 54 119 5.05e-16 79.0
Msa0489550 MtrunA17_Chr7g0270051 38.393 112 54 5 241 338 3 113 8.04e-14 72.4
Msa0489550 MtrunA17_Chr1g0150281 44.578 83 40 3 475 551 115 197 1.44e-15 77.8
Msa0489550 MtrunA17_Chr1g0150281 38.318 107 60 4 281 383 141 245 5.59e-12 67.0
Msa0489550 MtrunA17_Chr8g0379461 42.466 73 41 1 496 567 77 149 1.46e-15 77.0
Msa0489550 MtrunA17_Chr8g0379461 37.391 115 57 4 269 375 65 172 3.10e-15 75.9
Msa0489550 MtrunA17_Chr6g0468181 52.113 71 34 0 296 366 18 88 1.71e-15 73.2
Msa0489550 MtrunA17_Chr7g0228941 46.479 71 37 1 482 551 39 109 2.38e-15 73.2
Msa0489550 MtrunA17_Chr7g0228941 47.368 57 28 2 281 335 53 109 1.36e-12 65.1
Msa0489550 MtrunA17_Chr2g0289181 48.611 72 35 2 280 349 14 85 2.73e-15 75.9
Msa0489550 MtrunA17_Chr2g0289181 45.946 74 39 1 484 556 3 76 1.48e-14 73.9
Msa0489550 MtrunA17_Chr8g0387501 48.780 82 36 5 271 349 121 199 3.14e-15 76.6
Msa0489550 MtrunA17_Chr8g0387501 49.254 67 33 1 494 559 128 194 8.05e-15 75.5
Msa0489550 MtrunA17_Chr3g0139021 40.196 102 55 2 452 552 276 372 4.11e-15 78.2
Msa0489550 MtrunA17_Chr3g0139021 45.902 61 31 2 281 339 315 375 7.51e-11 64.7
Msa0489550 MtrunA17_Chr8g0387981 51.351 74 28 3 264 333 120 189 7.43e-15 77.0
Msa0489550 MtrunA17_Chr1g0202461 42.353 85 47 2 476 559 243 326 8.63e-15 77.0
Msa0489550 MtrunA17_Chr1g0202461 40.000 100 56 4 253 349 233 331 2.91e-13 72.0
Msa0489550 MtrunA17_Chr2g0319961 48.438 64 32 1 496 558 81 144 2.11e-14 73.9
Msa0489550 MtrunA17_Chr2g0319961 39.815 108 52 5 245 340 36 142 4.45e-12 67.0
Msa0489550 MtrunA17_Chr5g0419241 45.588 68 37 0 456 523 38 105 3.36e-14 69.3
Msa0489550 MtrunA17_Chr1g0188961 65.957 47 16 0 515 561 3 49 3.68e-14 67.8
Msa0489550 MtrunA17_Chr8g0348311 50.769 65 31 1 496 559 156 220 4.46e-14 74.3
Msa0489550 MtrunA17_Chr8g0348311 49.315 73 34 3 279 349 154 225 3.10e-11 65.5
Msa0489550 MtrunA17_Chr2g0293481 46.575 73 37 2 488 559 261 332 5.77e-14 75.1
Msa0489550 MtrunA17_Chr2g0293481 42.857 91 46 4 281 366 268 357 2.88e-12 69.7
Msa0489550 MtrunA17_Chr7g0248691 49.231 65 32 1 496 559 155 219 8.64e-14 73.2
Msa0489550 MtrunA17_Chr7g0248691 50.000 62 29 2 279 338 153 214 2.13e-11 65.9
Msa0489550 MtrunA17_Chr3g0126391 53.333 60 24 2 278 333 131 190 3.42e-13 71.6
Msa0489550 MtrunA17_Chr3g0126391 34.513 113 62 3 494 598 132 240 6.54e-12 67.8
Msa0489550 MtrunA17_Chr4g0009881 50.847 59 28 1 280 338 17 74 3.61e-13 66.6
Msa0489550 MtrunA17_Chr8g0347251 51.724 58 24 2 280 333 136 193 2.87e-12 68.9
Msa0489550 MtrunA17_Chr1g0188971 41.096 73 41 1 445 515 10 82 3.01e-12 62.8
Msa0489550 MtrunA17_Chr7g0275531 44.286 70 33 3 280 343 118 187 8.24e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0489550 AT5G56270.1 50.067 741 270 28 1 697 1 685 0.0 535
Msa0489550 AT4G26440.1 42.918 706 252 23 1 696 1 565 2.40e-145 436
Msa0489550 AT4G26640.7 43.488 453 191 11 113 560 14 406 9.64e-96 306
Msa0489550 AT4G26640.2 43.488 453 191 11 113 560 54 446 3.52e-95 305
Msa0489550 AT4G26640.5 52.414 290 88 6 275 560 27 270 1.27e-83 270
Msa0489550 AT4G26640.6 52.414 290 88 6 275 560 27 270 1.27e-83 270
Msa0489550 AT4G26640.4 52.414 290 88 6 275 560 27 270 1.27e-83 270
Msa0489550 AT4G26640.3 52.414 290 88 6 275 560 27 270 1.27e-83 270
Msa0489550 AT4G26640.1 42.459 431 183 11 135 560 4 374 1.42e-83 273
Msa0489550 AT2G03340.1 46.713 289 94 5 278 561 248 481 3.19e-75 251
Msa0489550 AT2G03340.1 51.316 76 36 1 495 570 250 324 1.99e-16 83.2
Msa0489550 AT1G13960.2 47.857 280 105 6 278 554 74 315 6.84e-72 238
Msa0489550 AT1G13960.1 47.857 280 105 6 278 554 227 468 1.03e-71 242
Msa0489550 AT2G37260.3 47.038 287 103 10 274 551 79 325 4.04e-59 203
Msa0489550 AT2G37260.3 52.055 73 30 2 496 564 86 157 2.48e-14 75.5
Msa0489550 AT2G37260.2 47.038 287 103 10 274 551 77 323 4.89e-59 203
Msa0489550 AT2G37260.2 52.055 73 30 2 496 564 84 155 2.57e-14 75.5
Msa0489550 AT2G37260.1 47.038 287 103 10 274 551 159 405 1.58e-58 204
Msa0489550 AT2G37260.1 52.055 73 30 2 496 564 166 237 3.54e-14 75.9
Msa0489550 AT5G07100.2 68.519 108 25 1 450 557 105 203 1.71e-42 153
Msa0489550 AT5G07100.2 64.000 75 26 1 279 352 23 97 1.59e-24 102
Msa0489550 AT5G07100.2 47.059 85 43 1 495 577 24 108 5.98e-16 77.8
Msa0489550 AT5G07100.2 54.688 64 28 1 280 342 141 204 4.14e-14 72.4
Msa0489550 AT5G07100.4 68.519 108 25 1 450 557 105 203 1.71e-42 153
Msa0489550 AT5G07100.4 64.000 75 26 1 279 352 23 97 1.59e-24 102
Msa0489550 AT5G07100.4 47.059 85 43 1 495 577 24 108 5.98e-16 77.8
Msa0489550 AT5G07100.4 54.688 64 28 1 280 342 141 204 4.14e-14 72.4
Msa0489550 AT5G07100.5 68.519 108 25 1 450 557 105 203 1.71e-42 153
Msa0489550 AT5G07100.5 64.000 75 26 1 279 352 23 97 1.59e-24 102
Msa0489550 AT5G07100.5 47.059 85 43 1 495 577 24 108 5.98e-16 77.8
Msa0489550 AT5G07100.5 54.688 64 28 1 280 342 141 204 4.14e-14 72.4
Msa0489550 AT5G07100.3 68.519 108 25 1 450 557 105 203 1.71e-42 153
Msa0489550 AT5G07100.3 64.000 75 26 1 279 352 23 97 1.59e-24 102
Msa0489550 AT5G07100.3 47.059 85 43 1 495 577 24 108 5.98e-16 77.8
Msa0489550 AT5G07100.3 54.688 64 28 1 280 342 141 204 4.14e-14 72.4
Msa0489550 AT4G30935.1 36.678 289 127 9 271 557 159 393 4.79e-42 159
Msa0489550 AT4G30935.1 52.000 75 31 2 272 345 327 397 7.00e-17 84.3
Msa0489550 AT5G07100.1 68.519 108 25 1 450 557 198 296 5.45e-42 155
Msa0489550 AT5G07100.1 64.000 75 26 1 279 352 116 190 4.88e-24 103
Msa0489550 AT5G07100.1 35.570 149 77 3 442 577 59 201 7.82e-17 82.4
Msa0489550 AT5G07100.1 54.688 64 28 1 280 342 234 297 5.68e-14 73.9
Msa0489550 AT4G12020.10 39.662 237 97 7 281 515 469 661 9.21e-40 158
Msa0489550 AT4G12020.10 41.304 92 43 2 494 575 467 557 4.21e-12 70.5
Msa0489550 AT4G12020.3 39.662 237 97 7 281 515 469 661 9.23e-40 158
Msa0489550 AT4G12020.3 41.304 92 43 2 494 575 467 557 4.43e-12 70.5
Msa0489550 AT4G12020.1 39.662 237 97 7 281 515 469 661 9.30e-40 158
Msa0489550 AT4G12020.1 41.304 92 43 2 494 575 467 557 4.67e-12 70.5
Msa0489550 AT4G12020.9 39.662 237 97 7 281 515 469 661 9.30e-40 158
Msa0489550 AT4G12020.9 41.304 92 43 2 494 575 467 557 4.67e-12 70.5
Msa0489550 AT4G12020.6 39.662 237 97 7 281 515 469 661 9.83e-40 158
Msa0489550 AT4G12020.6 41.304 92 43 2 494 575 467 557 4.73e-12 70.5
Msa0489550 AT4G12020.8 39.662 237 97 7 281 515 469 661 9.83e-40 158
Msa0489550 AT4G12020.8 41.304 92 43 2 494 575 467 557 4.73e-12 70.5
Msa0489550 AT4G12020.2 39.662 237 97 7 281 515 469 661 1.01e-39 158
Msa0489550 AT4G12020.2 41.304 92 43 2 494 575 467 557 4.67e-12 70.5
Msa0489550 AT4G12020.7 39.662 237 97 7 281 515 469 661 1.04e-39 158
Msa0489550 AT4G12020.7 41.304 92 43 2 494 575 467 557 4.51e-12 70.5
Msa0489550 AT4G12020.4 39.662 237 97 7 281 515 469 661 1.13e-39 158
Msa0489550 AT4G12020.4 41.304 92 43 2 494 575 467 557 4.44e-12 70.5
Msa0489550 AT4G12020.5 39.662 237 97 7 281 515 402 594 1.46e-39 157
Msa0489550 AT4G12020.5 41.304 92 43 2 494 575 400 490 4.84e-12 70.5
Msa0489550 AT4G12020.11 39.662 237 97 7 281 515 469 661 2.00e-39 157
Msa0489550 AT4G12020.11 41.304 92 43 2 494 575 467 557 7.62e-12 69.7
Msa0489550 AT3G01080.1 71.579 95 24 1 460 554 274 365 8.72e-39 149
Msa0489550 AT3G01080.1 72.857 70 18 1 278 347 165 233 4.32e-27 115
Msa0489550 AT3G01080.1 55.556 63 27 1 495 557 167 228 2.45e-14 76.3
Msa0489550 AT3G01080.1 58.333 60 24 1 280 338 306 365 3.82e-14 75.5
Msa0489550 AT3G01080.2 71.579 95 24 1 460 554 312 403 1.02e-38 150
Msa0489550 AT3G01080.2 72.857 70 18 1 278 347 203 271 4.19e-27 115
Msa0489550 AT3G01080.2 55.556 63 27 1 495 557 205 266 2.01e-14 76.6
Msa0489550 AT3G01080.2 58.333 60 24 1 280 338 344 403 2.68e-14 76.3
Msa0489550 AT2G30250.1 66.265 83 28 0 474 556 307 389 2.27e-34 135
Msa0489550 AT2G30250.1 67.692 65 21 0 279 343 165 229 5.58e-22 99.4
Msa0489550 AT2G30250.1 56.923 65 27 1 281 344 329 393 5.38e-14 75.1
Msa0489550 AT2G30250.1 47.561 82 37 2 473 554 149 224 1.68e-12 70.5
Msa0489550 AT2G04880.2 52.991 117 55 0 460 576 248 364 1.87e-33 134
Msa0489550 AT2G04880.2 64.407 59 21 0 280 338 111 169 2.63e-20 95.1
Msa0489550 AT2G04880.2 51.220 82 35 2 281 361 284 361 2.91e-17 85.5
Msa0489550 AT2G04880.2 36.036 111 64 3 493 598 109 217 4.80e-14 75.5
Msa0489550 AT2G04880.1 52.991 117 55 0 460 576 272 388 2.64e-33 134
Msa0489550 AT2G04880.1 64.407 59 21 0 280 338 111 169 2.87e-20 95.1
Msa0489550 AT2G04880.1 51.220 82 35 2 281 361 308 385 3.06e-17 85.9
Msa0489550 AT2G04880.1 50.000 64 31 1 493 556 109 171 5.27e-13 72.4
Msa0489550 AT2G44745.1 62.353 85 31 1 476 560 126 209 6.82e-31 121
Msa0489550 AT2G44745.1 61.404 57 21 1 280 335 145 201 9.82e-17 80.1
Msa0489550 AT1G55600.1 61.628 86 33 0 471 556 283 368 2.13e-29 122
Msa0489550 AT1G55600.1 58.333 60 24 1 281 339 308 367 2.54e-15 79.7
Msa0489550 AT4G18170.1 50.435 115 46 1 452 555 118 232 1.29e-28 117
Msa0489550 AT4G18170.1 63.333 60 21 1 280 338 172 231 6.25e-17 82.8
Msa0489550 AT4G39410.1 48.462 130 50 3 444 568 184 301 1.76e-28 116
Msa0489550 AT4G39410.1 52.632 57 26 1 280 335 223 279 8.71e-13 70.1
Msa0489550 AT1G69310.4 62.195 82 31 0 470 551 122 203 2.31e-28 115
Msa0489550 AT1G69310.4 61.404 57 21 1 280 335 147 203 6.16e-16 79.3
Msa0489550 AT1G69310.2 62.195 82 31 0 470 551 122 203 2.31e-28 115
Msa0489550 AT1G69310.2 61.404 57 21 1 280 335 147 203 6.16e-16 79.3
Msa0489550 AT1G69310.1 62.195 82 31 0 470 551 122 203 2.31e-28 115
Msa0489550 AT1G69310.1 61.404 57 21 1 280 335 147 203 6.16e-16 79.3
Msa0489550 AT3G01080.3 72.857 70 18 1 278 347 203 271 2.99e-28 116
Msa0489550 AT3G01080.3 55.556 63 27 1 495 557 205 266 4.82e-15 77.4
Msa0489550 AT1G29860.1 46.324 136 69 2 479 614 120 251 7.10e-28 114
Msa0489550 AT1G29860.1 60.938 64 24 1 280 342 136 199 2.69e-17 83.2
Msa0489550 AT2G47260.1 63.158 76 28 0 479 554 158 233 2.80e-26 110
Msa0489550 AT2G47260.1 57.812 64 26 1 280 342 174 237 8.00e-16 79.7
Msa0489550 AT5G13080.1 50.000 100 50 0 454 553 26 125 3.24e-26 105
Msa0489550 AT5G13080.1 51.724 58 27 1 280 336 67 124 1.21e-14 72.0
Msa0489550 AT5G46350.1 58.750 80 33 0 481 560 169 248 7.54e-26 109
Msa0489550 AT5G46350.1 57.143 70 28 2 280 348 183 251 4.44e-17 83.6
Msa0489550 AT3G01970.1 65.278 72 25 0 482 553 52 123 1.71e-25 103
Msa0489550 AT3G01970.1 53.125 64 27 2 280 341 65 127 5.84e-14 70.1
Msa0489550 AT5G49520.1 61.842 76 29 0 479 554 205 280 2.15e-25 109
Msa0489550 AT5G49520.1 60.000 60 23 1 280 338 221 280 9.32e-16 80.5
Msa0489550 AT5G26170.1 61.429 70 27 0 482 551 100 169 8.06e-25 102
Msa0489550 AT5G26170.1 52.632 57 26 1 280 335 113 169 1.52e-14 72.8
Msa0489550 AT4G04450.2 54.545 88 39 1 470 556 173 260 1.55e-24 107
Msa0489550 AT4G04450.2 44.565 92 49 2 250 339 168 259 2.37e-15 79.3
Msa0489550 AT5G41570.1 57.895 76 32 0 476 551 79 154 1.70e-24 101
Msa0489550 AT5G41570.1 32.692 156 95 4 186 336 5 155 2.36e-15 75.1
Msa0489550 AT5G64810.1 57.746 71 30 0 482 552 97 167 2.17e-24 101
Msa0489550 AT5G64810.1 49.123 57 28 1 280 335 110 166 5.31e-11 62.8
Msa0489550 AT2G46130.1 55.000 80 36 0 472 551 7 86 6.26e-24 97.4
Msa0489550 AT2G46130.1 63.793 58 20 1 280 336 30 87 1.36e-18 82.4
Msa0489550 AT4G04450.1 54.545 88 39 1 470 556 267 354 6.52e-24 106
Msa0489550 AT4G04450.1 44.565 92 49 2 250 339 262 353 5.39e-15 79.0
Msa0489550 AT1G64000.1 56.579 76 33 0 476 551 95 170 9.27e-24 99.8
Msa0489550 AT1G64000.1 53.448 58 26 1 280 336 114 171 1.72e-15 75.9
Msa0489550 AT1G69310.3 58.537 82 30 1 470 551 122 199 1.21e-23 102
Msa0489550 AT1G69310.3 56.140 57 20 2 280 335 147 199 2.19e-11 65.9
Msa0489550 AT4G22070.4 53.488 86 39 1 470 554 272 357 3.01e-23 104
Msa0489550 AT4G22070.4 54.098 61 26 2 281 339 298 358 3.53e-14 76.3
Msa0489550 AT4G22070.3 53.488 86 39 1 470 554 272 357 3.01e-23 104
Msa0489550 AT4G22070.3 54.098 61 26 2 281 339 298 358 3.53e-14 76.3
Msa0489550 AT4G22070.2 53.488 86 39 1 470 554 272 357 3.01e-23 104
Msa0489550 AT4G22070.2 54.098 61 26 2 281 339 298 358 3.53e-14 76.3
Msa0489550 AT4G22070.1 53.488 86 39 1 470 554 272 357 3.01e-23 104
Msa0489550 AT4G22070.1 54.098 61 26 2 281 339 298 358 3.53e-14 76.3
Msa0489550 AT3G62340.1 50.943 106 48 1 471 572 94 199 6.40e-23 99.8
Msa0489550 AT3G62340.1 45.679 81 43 1 259 338 97 177 2.77e-15 77.4
Msa0489550 AT1G62300.1 54.878 82 36 1 474 554 291 372 1.38e-22 102
Msa0489550 AT1G62300.1 54.098 61 26 2 281 339 313 373 2.67e-14 76.6
Msa0489550 AT1G68150.1 50.000 90 44 1 479 567 219 308 2.71e-22 100
Msa0489550 AT1G68150.1 53.333 60 26 2 281 338 236 295 1.28e-12 70.5
Msa0489550 AT5G15130.2 48.193 83 42 1 478 559 168 250 4.70e-22 100
Msa0489550 AT5G15130.1 46.067 89 47 1 472 559 204 292 4.71e-22 101
Msa0489550 AT1G18860.1 52.564 78 36 1 478 554 222 299 1.29e-21 99.8
Msa0489550 AT1G18860.1 53.333 60 26 2 281 338 240 299 2.97e-12 70.1
Msa0489550 AT4G01720.1 54.545 77 34 1 479 554 223 299 1.08e-20 96.7
Msa0489550 AT4G01720.1 43.299 97 51 3 247 339 204 300 8.56e-14 75.1
Msa0489550 AT2G21900.1 41.509 106 47 3 455 556 76 170 6.42e-20 89.0
Msa0489550 AT2G21900.1 50.000 60 29 1 280 338 109 168 4.89e-13 68.9
Msa0489550 AT2G23320.1 47.368 95 39 3 460 553 215 299 1.30e-19 90.9
Msa0489550 AT2G23320.1 37.931 87 51 3 251 335 212 297 8.02e-12 67.4
Msa0489550 AT4G24240.1 49.474 95 37 3 460 553 256 340 1.96e-19 90.9
Msa0489550 AT4G24240.1 35.849 106 62 4 232 335 237 338 1.42e-12 70.1
Msa0489550 AT2G46130.2 51.250 80 35 1 472 551 7 82 2.48e-19 84.3
Msa0489550 AT2G46130.2 58.621 58 19 2 280 336 30 83 4.31e-14 69.3
Msa0489550 AT5G28650.1 39.231 130 68 3 433 561 210 329 3.13e-19 90.1
Msa0489550 AT5G28650.1 36.782 87 52 3 251 335 234 319 3.36e-11 65.9
Msa0489550 AT3G04670.1 44.660 103 46 3 460 561 237 329 1.50e-18 87.8
Msa0489550 AT3G04670.1 50.847 59 27 2 281 337 263 321 5.28e-11 65.1
Msa0489550 AT4G31550.1 47.059 102 50 2 466 563 217 318 1.65e-18 87.8
Msa0489550 AT4G31550.1 39.080 87 50 3 251 335 218 303 4.81e-12 68.2
Msa0489550 AT2G24570.1 49.425 87 43 1 466 551 214 300 3.17e-18 87.0
Msa0489550 AT2G24570.1 39.080 87 50 3 251 335 215 300 6.16e-12 67.8
Msa0489550 AT4G31550.2 51.087 92 41 2 476 563 226 317 3.49e-18 86.7
Msa0489550 AT4G31550.2 43.421 76 40 3 262 335 228 302 1.68e-11 66.6
Msa0489550 AT1G80840.1 51.562 64 30 1 493 555 144 207 4.42e-18 85.9
Msa0489550 AT1G80840.1 50.820 61 28 2 280 338 146 206 2.19e-12 68.9
Msa0489550 AT2G30590.1 34.965 143 79 4 410 551 241 370 5.42e-18 87.0
Msa0489550 AT2G30590.1 40.659 91 51 3 251 339 285 374 5.84e-14 74.7
Msa0489550 AT5G43290.1 59.322 59 24 0 493 551 112 170 5.57e-18 85.1
Msa0489550 AT5G43290.1 58.621 58 23 1 279 335 113 170 8.60e-13 69.7
Msa0489550 AT4G23550.1 46.753 77 40 1 484 559 129 205 9.36e-18 85.1
Msa0489550 AT4G23550.1 49.296 71 33 3 281 349 141 210 3.48e-11 65.5
Msa0489550 AT1G69810.2 43.158 95 50 3 478 570 128 220 3.40e-17 84.0
Msa0489550 AT1G69810.2 43.056 72 38 2 281 349 146 217 1.07e-11 67.4
Msa0489550 AT1G69810.1 43.158 95 50 3 478 570 186 278 5.47e-17 84.0
Msa0489550 AT1G69810.1 43.056 72 38 2 281 349 204 275 9.57e-12 67.8
Msa0489550 AT2G25000.2 45.205 73 39 1 494 565 102 174 6.40e-17 80.9
Msa0489550 AT2G25000.2 49.180 61 29 2 280 338 103 163 2.81e-11 64.3
Msa0489550 AT2G25000.4 45.205 73 39 1 494 565 102 174 6.40e-17 80.9
Msa0489550 AT2G25000.4 49.180 61 29 2 280 338 103 163 2.81e-11 64.3
Msa0489550 AT2G25000.3 45.205 73 39 1 494 565 124 196 1.16e-16 80.9
Msa0489550 AT2G25000.3 49.180 61 29 2 280 338 125 185 4.81e-11 64.3
Msa0489550 AT2G25000.1 45.205 73 39 1 494 565 145 217 1.90e-16 80.5
Msa0489550 AT2G25000.1 49.180 61 29 2 280 338 146 206 7.16e-11 63.9
Msa0489550 AT4G31800.2 50.000 64 31 1 494 556 110 173 3.89e-16 79.0
Msa0489550 AT4G31800.2 47.541 61 30 2 280 338 111 171 6.16e-12 66.6
Msa0489550 AT4G31800.1 50.000 64 31 1 494 556 175 238 7.53e-16 79.7
Msa0489550 AT4G31800.1 47.541 61 30 2 280 338 176 236 9.19e-12 67.4
Msa0489550 AT4G01250.1 41.748 103 44 2 458 559 106 193 1.22e-15 78.6
Msa0489550 AT4G01250.1 47.887 71 34 3 281 349 129 198 1.41e-11 66.6
Msa0489550 AT5G52830.1 43.529 85 46 2 476 559 147 230 4.82e-15 77.8
Msa0489550 AT5G52830.1 50.685 73 33 3 279 349 164 235 3.92e-13 72.0
Msa0489550 AT2G40740.1 39.604 101 56 3 256 351 149 249 5.06e-15 76.6
Msa0489550 AT2G40740.3 39.604 101 56 3 256 351 158 258 6.48e-15 76.6
Msa0489550 AT1G29280.1 51.562 64 29 2 277 338 71 134 1.78e-14 74.7
Msa0489550 AT1G29280.1 47.692 65 33 1 496 559 75 139 3.53e-14 73.6
Msa0489550 AT2G34830.1 38.000 100 56 2 461 559 186 280 5.93e-14 75.1
Msa0489550 AT2G34830.1 51.667 60 27 2 281 338 216 275 6.48e-12 68.6
Msa0489550 AT1G30650.1 38.000 100 56 2 461 559 188 282 6.29e-14 75.1
Msa0489550 AT1G30650.1 50.000 60 28 2 281 338 218 277 1.89e-11 67.4
Msa0489550 AT2G34830.2 38.000 100 56 2 461 559 195 289 6.42e-14 75.1
Msa0489550 AT2G34830.2 51.667 60 27 2 281 338 225 284 6.47e-12 68.9
Msa0489550 AT2G38470.1 58.065 62 21 2 495 554 184 242 1.47e-13 74.3
Msa0489550 AT3G58710.2 47.826 69 33 2 496 561 71 139 2.64e-13 71.2
Msa0489550 AT3G58710.2 52.381 63 28 2 278 338 68 130 9.78e-13 69.7
Msa0489550 AT3G58710.1 47.826 69 33 2 496 561 72 140 2.65e-13 71.2
Msa0489550 AT3G58710.1 52.381 63 28 2 278 338 69 131 9.72e-13 69.7
Msa0489550 AT5G45050.4 47.692 65 33 1 496 559 1042 1106 1.53e-12 71.6
Msa0489550 AT5G45050.4 48.750 80 33 4 262 338 1027 1101 4.06e-12 70.5
Msa0489550 AT5G45050.1 47.692 65 33 1 496 559 1181 1245 1.87e-12 71.6
Msa0489550 AT5G45050.1 48.750 80 33 4 262 338 1166 1240 4.14e-12 70.5
Msa0489550 AT5G45050.2 47.692 65 33 1 496 559 1153 1217 2.01e-12 71.6
Msa0489550 AT5G45050.2 48.750 80 33 4 262 338 1138 1212 4.30e-12 70.5
Msa0489550 AT4G23810.1 45.902 61 29 2 278 334 156 216 2.67e-12 68.9
Msa0489550 AT5G24110.1 39.175 97 48 5 272 363 106 196 6.47e-12 67.8
Msa0489550 AT5G45260.1 33.645 107 62 4 250 349 1175 1279 2.23e-11 68.2
Msa0489550 AT2G46400.1 27.922 154 91 5 448 597 65 202 2.36e-11 65.9
Msa0489550 AT4G11070.2 43.056 72 35 3 278 343 107 178 3.46e-11 65.1
Msa0489550 AT4G11070.1 43.056 72 35 3 278 343 139 210 4.36e-11 65.1

Find 221 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTATTCTTCACATGTTAA+AGG 0.167499 3_4:+10119660 Msa0489550:three_prime_UTR
TCTCTTACATATTCTTTAAA+AGG 0.187225 3_4:+10119541 Msa0489550:three_prime_UTR
TTTACAATTCTTCACTTCTT+AGG 0.213546 3_4:+10115371 Msa0489550:five_prime_UTR
GGCGACTTGGAGGAGGTTTC+GGG 0.221606 3_4:-10118206 None:intergenic
GAGAGACCCAGATACAATTT+TGG 0.228581 3_4:+10115251 Msa0489550:five_prime_UTR
CGGCGACTTGGAGGAGGTTT+CGG 0.234020 3_4:-10118207 None:intergenic
GCAGTGGCGGTGACCTAGGC+TGG 0.244486 3_4:+10118304 Msa0489550:CDS
TATAGATTATCTCCGTTATA+TGG 0.256932 3_4:-10118167 None:intergenic
CTTGGTTCGTTCAACCTTCC+CGG 0.258909 3_4:+10119215 Msa0489550:CDS
ACCCGACCCAAAATTGTATC+TGG 0.267656 3_4:-10115258 None:intergenic
AACAATTTGCAAACTCAAAA+TGG 0.274108 3_4:+10118426 Msa0489550:CDS
ATATAGCTGGAGCTGGTAAT+TGG 0.284730 3_4:+10118346 Msa0489550:CDS
GGTTATCGGTGGCGGAAATA+TGG 0.285913 3_4:+10118787 Msa0489550:CDS
CTTTCTCAGCAATCCCTTCA+TGG 0.309397 3_4:+10117811 Msa0489550:CDS
CACTACCCTTAACTTGCTTT+TGG 0.312076 3_4:-10118068 None:intergenic
TCCTCGCAAGCAAAGCTTCC+TGG 0.313451 3_4:+10119320 Msa0489550:CDS
GGATATAATTGGAGAAAATA+TGG 0.316349 3_4:+10118045 Msa0489550:CDS
TGGGTCGGGTTCGGGTTTCT+CGG 0.325293 3_4:+10115271 Msa0489550:five_prime_UTR
AAAAGACAATTCTACACATT+TGG 0.325774 3_4:+10117939 Msa0489550:CDS
TGCTCTCTGTATTCAACCTT+GGG 0.329383 3_4:-10116253 None:intergenic
TATAACGGAGATAATCTATA+AGG 0.331910 3_4:+10118170 Msa0489550:CDS
CATCGGAGGATGGATATAAT+TGG 0.333091 3_4:+10118034 Msa0489550:CDS
GATAACTTGTATCGCTCAAT+TGG 0.335113 3_4:-10116160 None:intergenic
GATGAAAATCTTGCACTAAA+TGG 0.339970 3_4:+10115999 Msa0489550:CDS
ATGTAGTGATCACAGATTTA+AGG 0.340679 3_4:-10119034 None:intergenic
GTTGGATTGGTTACCGTATC+CGG 0.341255 3_4:-10118406 None:intergenic
CCCTGTGGTTCACCATGTTC+AGG 0.344262 3_4:-10118279 None:intergenic
CCGCGAACTCGACTTGTTCT+CGG 0.346353 3_4:-10116186 None:intergenic
AATGGAAACTTTCCTGTTGT+TGG 0.346418 3_4:-10116936 None:intergenic
TTTCAAGCCTACAGCAGATT+CGG 0.353116 3_4:+10117058 Msa0489550:CDS
TCCACATTTGGTTCTCCCTT+TGG 0.354303 3_4:-10119413 None:intergenic
TTCTTACCTTTGTGTATGAA+TGG 0.359984 3_4:-10115185 None:intergenic
TCTTGCACTAAATGGTGATT+GGG 0.360621 3_4:+10116007 Msa0489550:CDS
AACTTATTCTCTCAGGAAAC+TGG 0.362818 3_4:+10118672 Msa0489550:intron
CCAGGTGGTATAGTCAAGTA+TGG 0.373638 3_4:-10116317 None:intergenic
GGTACTACTCACATTGATTC+AGG 0.374030 3_4:+10118447 Msa0489550:CDS
CATGAATCCCATTTCATTTG+CGG 0.377014 3_4:-10119387 None:intergenic
TTCAAGCCTACAGCAGATTC+GGG 0.377029 3_4:+10117059 Msa0489550:CDS
CGTGTTCCTTGCAAATTCAT+TGG 0.378555 3_4:+10116370 Msa0489550:CDS
AACTTTCCTGTTGTTGGAGA+TGG 0.388150 3_4:-10116930 None:intergenic
ATGTTAAGGCCGCCGCGTTC+AGG 0.388731 3_4:-10119443 None:intergenic
GCAACGCGCCGCAAATGAAA+TGG 0.390178 3_4:+10119379 Msa0489550:CDS
GATAGAATTGCTGCTAGAAC+TGG 0.395317 3_4:+10116221 Msa0489550:CDS
GGCGGCCTTAACATGCAAAA+TGG 0.396093 3_4:+10119452 Msa0489550:CDS
GAACCTTGCAATGTCGGGAT+TGG 0.397116 3_4:+10119292 Msa0489550:CDS
TGTTGTTGCTGCATCATGAA+TGG 0.397926 3_4:-10119356 None:intergenic
AACCTTGCAATGTCGGGATT+GGG 0.398700 3_4:+10119293 Msa0489550:CDS
TTGTGAACTTGAGATGGTTC+AGG 0.405320 3_4:-10119176 None:intergenic
ATCTTGCACTAAATGGTGAT+TGG 0.405599 3_4:+10116006 Msa0489550:CDS
TCAGGATTAGCGTCCACATT+TGG 0.408554 3_4:-10119425 None:intergenic
GGTCATCCACATGGCTTCTT+CGG 0.412134 3_4:+10119251 Msa0489550:CDS
TACTACAAGTGCACCAATGC+AGG 0.412359 3_4:+10118972 Msa0489550:CDS
ATGCCTGACCGGCGACTTGG+AGG 0.413497 3_4:-10118216 None:intergenic
GCAGCTCAAGGACAAGGTTC+TGG 0.414978 3_4:+10119128 Msa0489550:CDS
CCAAGTCGCCGGTCAGGCAT+AGG 0.416054 3_4:+10118219 Msa0489550:CDS
TTGGATTGGTTACCGTATCC+GGG 0.416255 3_4:-10118405 None:intergenic
CAAAAGTAGCCTCCATCTTA+AGG 0.416713 3_4:+10117891 Msa0489550:CDS
TACAGTGAGGTTTGAATGGC+GGG 0.422498 3_4:+10115972 Msa0489550:exon
ATAACGGAGATAATCTATAA+GGG 0.422795 3_4:+10118171 Msa0489550:CDS
CCTCCTCCAAGTCGCCGGTC+AGG 0.425165 3_4:+10118213 Msa0489550:CDS
ATATGGCCAAAAGCAAGTTA+AGG 0.425865 3_4:+10118062 Msa0489550:CDS
GACTCGTTGGTTGCTGGTGT+TGG 0.426208 3_4:+10118003 Msa0489550:CDS
AACGGAGACTCGTTGGTTGC+TGG 0.427288 3_4:+10117997 Msa0489550:CDS
GGAAGCTTTGCTTGCGAGGA+AGG 0.428637 3_4:-10119317 None:intergenic
AATGGGTTCATAGGCATTCC+AGG 0.429862 3_4:-10119338 None:intergenic
CCTTACAGTGCACCCTGCAT+TGG 0.431542 3_4:-10118985 None:intergenic
GAGGGACAAGATGGTGATTC+CGG 0.435458 3_4:+10116134 Msa0489550:CDS
AAGAATGACTACCTTGGGTT+GGG 0.441222 3_4:-10118832 None:intergenic
CTTCCCGAATGTTCTGAATT+CGG 0.445571 3_4:-10116101 None:intergenic
TGACAGCTGATGTTGCTTCA+AGG 0.445597 3_4:-10118380 None:intergenic
ATGCTCTCTGTATTCAACCT+TGG 0.445623 3_4:-10116254 None:intergenic
ATGGTTCAGGTCTATGCATA+TGG 0.448997 3_4:-10119163 None:intergenic
ACGACCGAATTCAGAACATT+CGG 0.453189 3_4:+10116097 Msa0489550:CDS
AAGTTTCCATTTGTTTCAAA+CGG 0.456278 3_4:+10116948 Msa0489550:CDS
CCTATGCCTGACCGGCGACT+TGG 0.458013 3_4:-10118219 None:intergenic
GTTGTTGCTGCATCATGAAT+GGG 0.462753 3_4:-10119355 None:intergenic
TTGATACAGTGAGGTTTGAA+TGG 0.463316 3_4:+10115968 Msa0489550:exon
GGAGAATCTAAAAGTGTAGT+AGG 0.463976 3_4:-10116347 None:intergenic
ATGACCTAGCTGCTGTCTCC+CGG 0.464009 3_4:-10119234 None:intergenic
GTGTACTCATTCAAATTGTC+CGG 0.469086 3_4:+10118113 Msa0489550:CDS
ATTATGAATCACATGCCTCT+TGG 0.469433 3_4:+10119497 Msa0489550:CDS
CTGTCGAACCTTGCAATGTC+GGG 0.470366 3_4:+10119287 Msa0489550:CDS
TATGGCCAAAAGCAAGTTAA+GGG 0.471248 3_4:+10118063 Msa0489550:CDS
ACTCATGGTAGTGTATCATT+AGG 0.472631 3_4:+10118528 Msa0489550:CDS
ATATCCTCGATGATGGTTAT+CGG 0.475694 3_4:+10118773 Msa0489550:CDS
ATGTTGCCGTTTGAAACAAA+TGG 0.480485 3_4:-10116954 None:intergenic
CGGAAAACTCTGCCTTAAGA+TGG 0.485915 3_4:-10117903 None:intergenic
TGTTCAATCATTTCTAGTGG+TGG 0.486892 3_4:+10115306 Msa0489550:five_prime_UTR
CCAATGCAGGGTGCACTGTA+AGG 0.487294 3_4:+10118985 Msa0489550:CDS
CAACGCGCCGCAAATGAAAT+GGG 0.487752 3_4:+10119380 Msa0489550:CDS
GGTGGCAGTGGCGGTGACCT+AGG 0.491981 3_4:+10118300 Msa0489550:CDS
ATAACTTGTATCGCTCAATT+GGG 0.492378 3_4:-10116159 None:intergenic
GCACAGCCATCTCCAACAAC+AGG 0.493338 3_4:+10116924 Msa0489550:CDS
TTGGTTCGTTCAACCTTCCC+GGG 0.494017 3_4:+10119216 Msa0489550:CDS
GTACAGAAGGGAAATATAGC+TGG 0.494656 3_4:+10118333 Msa0489550:CDS
GAGTTTGCAAATTGTTGGAT+TGG 0.499841 3_4:-10118419 None:intergenic
CGACCGAATTCAGAACATTC+GGG 0.500267 3_4:+10116098 Msa0489550:CDS
TGACTGCTGGAACGAGCAGC+GGG 0.501885 3_4:-10119083 None:intergenic
TCCTGAACATGGTGAACCAC+AGG 0.504125 3_4:+10118278 Msa0489550:CDS
TGCATCATGAATGGGTTCAT+AGG 0.504266 3_4:-10119347 None:intergenic
AACGGCATGAGGCCTTCGCT+TGG 0.513928 3_4:+10119197 Msa0489550:CDS
CAAGTCGCCGGTCAGGCATA+GGG 0.514587 3_4:+10118220 Msa0489550:CDS
AATTCAGAACATTCGGGAAG+TGG 0.517987 3_4:+10116104 Msa0489550:CDS
GGTGAACCACAGGGTGGCAG+TGG 0.518041 3_4:+10118288 Msa0489550:CDS
CCTGTCGAACCTTGCAATGT+CGG 0.519344 3_4:+10119286 Msa0489550:CDS
ATCGAGGATATCTACTTCGC+TGG 0.520413 3_4:-10118761 None:intergenic
CAGTGGCGGTGACCTAGGCT+GGG 0.521688 3_4:+10118305 Msa0489550:CDS
ATTCGCATTGACGTGACTGC+TGG 0.522171 3_4:-10119096 None:intergenic
TCCAGGAAGCTTTGCTTGCG+AGG 0.522306 3_4:-10119321 None:intergenic
CCGACATTGCAAGGTTCGAC+AGG 0.522335 3_4:-10119286 None:intergenic
AAATGATTGAACATAAGAAT+CGG 0.522606 3_4:-10115296 None:intergenic
CCTGACCGGCGACTTGGAGG+AGG 0.523850 3_4:-10118213 None:intergenic
CCGAGAACAAGTCGAGTTCG+CGG 0.525857 3_4:+10116186 Msa0489550:CDS
CGAGAACAAGTCGAGTTCGC+GGG 0.525950 3_4:+10116187 Msa0489550:CDS
TTCTCATGAGGGCCATATAA+CGG 0.530629 3_4:+10118155 Msa0489550:CDS
TCAGCTGTCAACCCCGGATA+CGG 0.534204 3_4:+10118393 Msa0489550:CDS
TGGTGTTGGCGGTACTCCAT+CGG 0.535867 3_4:+10118017 Msa0489550:CDS
TAAGAATGACTACCTTGGGT+TGG 0.541313 3_4:-10118833 None:intergenic
CTAGCTGCTGTCTCCCGGGA+AGG 0.542522 3_4:-10119229 None:intergenic
GGAAGAGCAAGCAGATGAAG+AGG 0.543715 3_4:+10117960 Msa0489550:CDS
AGGCTGGGCTAATGTACAGA+AGG 0.548184 3_4:+10118320 Msa0489550:CDS
CTGAAGCTTCAACACCATGA+AGG 0.548464 3_4:-10117825 None:intergenic
GAAGCTTTGCTTGCGAGGAA+GGG 0.549966 3_4:-10119316 None:intergenic
TCCACTTGCATGTCAGCATG+AGG 0.551146 3_4:-10118252 None:intergenic
TGTAATGATCAGACATACAT+AGG 0.551546 3_4:+10119604 Msa0489550:three_prime_UTR
TCTAGTAGCTCCACTCATCT+CGG 0.552091 3_4:-10118704 None:intergenic
GGCCCAATCCCGACATTGCA+AGG 0.552372 3_4:-10119295 None:intergenic
AGGGACCTTGGACTTGGACT+AGG 0.552485 3_4:-10116035 None:intergenic
ATGGGATTCATGTTACCAAA+GGG 0.552557 3_4:+10119398 Msa0489550:CDS
GAACCACAGGGTGGCAGTGG+CGG 0.552598 3_4:+10118291 Msa0489550:CDS
TTATGTTCAATCATTTCTAG+TGG 0.552789 3_4:+10115303 Msa0489550:five_prime_UTR
TAGTTGACCCTATGCCTGAC+CGG 0.554027 3_4:-10118227 None:intergenic
AACTCACCAATGAATTTGCA+AGG 0.555999 3_4:-10116376 None:intergenic
TCGTTGGTTGCTGGTGTTGG+CGG 0.559827 3_4:+10118006 Msa0489550:CDS
CCCGACCCAAAATTGTATCT+GGG 0.559927 3_4:-10115257 None:intergenic
GAAGAAGAGGAAGACGATCA+AGG 0.561217 3_4:+10118504 Msa0489550:CDS
GAACTCGACTTGTTCTCGGT+TGG 0.563005 3_4:-10116182 None:intergenic
TGACCTAGCTGCTGTCTCCC+GGG 0.564057 3_4:-10119233 None:intergenic
CCCTCATGCTGACATGCAAG+TGG 0.564823 3_4:+10118251 Msa0489550:CDS
GTACACTTGTAGTAACTTCG+AGG 0.567336 3_4:-10118096 None:intergenic
TCTGTACATTAGCCCAGCCT+AGG 0.570398 3_4:-10118317 None:intergenic
GTAGTCTGAACAACAACTCT+AGG 0.571480 3_4:-10118739 None:intergenic
GTCTTCCTAGTCCAAGTCCA+AGG 0.572524 3_4:+10116030 Msa0489550:CDS
GAAGTAGATATCCTCGATGA+TGG 0.573669 3_4:+10118766 Msa0489550:CDS
AAGGGAAATATAGCTGGAGC+TGG 0.574752 3_4:+10118339 Msa0489550:CDS
CAATGAATTTGCAAGGAACA+CGG 0.575971 3_4:-10116369 None:intergenic
TGTATCGCTCAATTGGGTAC+CGG 0.577573 3_4:-10116153 None:intergenic
CGAAACCTCCTCCAAGTCGC+CGG 0.578429 3_4:+10118208 Msa0489550:CDS
CCGATGATATTTCTGAGTTG+CGG 0.578691 3_4:-10116977 None:intergenic
GGTAGAACTGAGGGACAAGA+TGG 0.580548 3_4:+10116125 Msa0489550:CDS
GGTGGTTGAACTTCCTTGTG+TGG 0.584188 3_4:+10115324 Msa0489550:five_prime_UTR
TGAAGCTTCAACACCATGAA+GGG 0.585732 3_4:-10117824 None:intergenic
CAATTATATCCATCCTCCGA+TGG 0.586613 3_4:-10118033 None:intergenic
TCGATGATGGTTATCGGTGG+CGG 0.587391 3_4:+10118779 Msa0489550:CDS
ATGAATCAGAGTCTAAAAGA+AGG 0.588175 3_4:+10118568 Msa0489550:CDS
GAATCATATGCCGAGATGAG+TGG 0.589323 3_4:+10118694 Msa0489550:CDS
GAAAGTAGAACGTTCTCATG+AGG 0.589600 3_4:+10118143 Msa0489550:CDS
AAGAGTCAACGGAGACTCGT+TGG 0.589962 3_4:+10117990 Msa0489550:CDS
GGCGGTACTCCATCGGAGGA+TGG 0.594165 3_4:+10118024 Msa0489550:CDS
ATGCCGTTGTGAACTTGAGA+TGG 0.595174 3_4:-10119182 None:intergenic
CTCAAGTTCACAACGGCATG+AGG 0.596029 3_4:+10119186 Msa0489550:CDS
CATTGATTCAGGAGATGCAG+TGG 0.597968 3_4:+10118458 Msa0489550:CDS
AACAACTCTAGGCTCGCGAA+TGG 0.599268 3_4:-10118728 None:intergenic
GACTTGGAGGAGGTTTCGGG+TGG 0.599626 3_4:-10118203 None:intergenic
AATGAATTTGCAAGGAACAC+GGG 0.604026 3_4:-10116368 None:intergenic
AAAGTAGAACGTTCTCATGA+GGG 0.604575 3_4:+10118144 Msa0489550:CDS
TCGGGAAGTGGTAGAACTGA+GGG 0.606371 3_4:+10116116 Msa0489550:CDS
GAAGACGATCAAGGCACTCA+TGG 0.606644 3_4:+10118513 Msa0489550:CDS
CCACTTGCATGTCAGCATGA+GGG 0.606802 3_4:-10118251 None:intergenic
GCAACATCAGCTGTCAACCC+CGG 0.607436 3_4:+10118387 Msa0489550:CDS
TACACTTGTAGTAACTTCGA+GGG 0.609634 3_4:-10118095 None:intergenic
TAACGGAGATAATCTATAAG+GGG 0.614320 3_4:+10118172 Msa0489550:CDS
TCTAACGCAGCTCAAGGACA+AGG 0.616375 3_4:+10119122 Msa0489550:CDS
TATGGACAGAAAGTTGTCAA+AGG 0.617805 3_4:+10118805 Msa0489550:CDS
ATACAGTGAGGTTTGAATGG+CGG 0.619285 3_4:+10115971 Msa0489550:exon
AATGCTTCTAACGCAGCTCA+AGG 0.620924 3_4:+10119116 Msa0489550:CDS
GAGGGGCCCGAATCTGCTGT+AGG 0.622516 3_4:-10117065 None:intergenic
GAAGAGCAAGCAGATGAAGA+GGG 0.623139 3_4:+10117961 Msa0489550:CDS
CCATACTTGACTATACCACC+TGG 0.626430 3_4:+10116317 Msa0489550:CDS
GTTCATCCATTCATACACAA+AGG 0.626676 3_4:+10115179 Msa0489550:five_prime_UTR
AAAACTCTGCCTTAAGATGG+AGG 0.626789 3_4:-10117900 None:intergenic
GTGACTGCTGGAACGAGCAG+CGG 0.626891 3_4:-10119084 None:intergenic
CTTGCACTAAATGGTGATTG+GGG 0.627891 3_4:+10116008 Msa0489550:CDS
GAACTGGATTTAATGCCCCA+AGG 0.631607 3_4:+10116237 Msa0489550:CDS
CCGCAACTCAGAAATATCAT+CGG 0.633293 3_4:+10116977 Msa0489550:CDS
ACTACAAGTGCACCAATGCA+GGG 0.634462 3_4:+10118973 Msa0489550:CDS
AATGGGATTCATGTTACCAA+AGG 0.635351 3_4:+10119397 Msa0489550:CDS
CTTCCCGGGAGACAGCAGCT+AGG 0.636920 3_4:+10119230 Msa0489550:CDS
CTTGAATGAAAGAAAATCAG+CGG 0.637570 3_4:-10119698 None:intergenic
TCTGTGATCACTACATACGA+GGG 0.638313 3_4:+10119041 Msa0489550:CDS
ATCTGTGATCACTACATACG+AGG 0.641100 3_4:+10119040 Msa0489550:CDS
TCATTAGGTTATGATGCGGA+AGG 0.642548 3_4:+10118543 Msa0489550:CDS
TCAAAGGAAATCCCAACCCA+AGG 0.645747 3_4:+10118821 Msa0489550:CDS
ACAGTGAGGTTTGAATGGCG+GGG 0.648259 3_4:+10115973 Msa0489550:exon
TGGATTGGTTACCGTATCCG+GGG 0.651936 3_4:-10118404 None:intergenic
GAGAACAAGTCGAGTTCGCG+GGG 0.652302 3_4:+10116188 Msa0489550:CDS
TCAATCTCAAAGAGTTGATG+CGG 0.655003 3_4:+10117849 Msa0489550:CDS
TCCTCGATGATGGTTATCGG+TGG 0.657777 3_4:+10118776 Msa0489550:CDS
GCTCTCTGTATTCAACCTTG+GGG 0.658042 3_4:-10116252 None:intergenic
CCTGAACATGGTGAACCACA+GGG 0.659823 3_4:+10118279 Msa0489550:CDS
GTGCACTGTAAGGAAGCATG+TGG 0.665453 3_4:+10118995 Msa0489550:CDS
CAAGTGGACAATCCTGAACA+TGG 0.665803 3_4:+10118267 Msa0489550:CDS
ACCAAAGGGAGAACCAAATG+TGG 0.665868 3_4:+10119412 Msa0489550:CDS
AACGGAGATAATCTATAAGG+GGG 0.668962 3_4:+10118173 Msa0489550:CDS
TGTTGGCGGTACTCCATCGG+AGG 0.670376 3_4:+10118020 Msa0489550:CDS
AGGTTGAACGAACCAAGCGA+AGG 0.670429 3_4:-10119209 None:intergenic
AACAAGTCGAGTTCGCGGGG+TGG 0.672658 3_4:+10116191 Msa0489550:CDS
TTCGGGAAGTGGTAGAACTG+AGG 0.674120 3_4:+10116115 Msa0489550:CDS
TCACCGCCACTGCCACCCTG+TGG 0.678158 3_4:-10118294 None:intergenic
GGCTGGGCTAATGTACAGAA+GGG 0.678675 3_4:+10118321 Msa0489550:CDS
TGTATCATTAGGTTATGATG+CGG 0.683277 3_4:+10118539 Msa0489550:CDS
CAGCAGCTAGGTCATCCACA+TGG 0.696825 3_4:+10119242 Msa0489550:CDS
AGTGTAGTAGGACTAAGACC+AGG 0.720135 3_4:-10116335 None:intergenic
TTCATGCCGAAGAAGCCATG+TGG 0.726348 3_4:-10119257 None:intergenic
GTAGTAGGACTAAGACCAGG+TGG 0.737529 3_4:-10116332 None:intergenic
GACTGCTGGAACGAGCAGCG+GGG 0.738619 3_4:-10119082 None:intergenic
GAACCATCTCAAGTTCACAA+CGG 0.751840 3_4:+10119179 Msa0489550:CDS
GACGCTAATCCTGAACGCGG+CGG 0.752010 3_4:+10119434 Msa0489550:CDS
GCCACCGATAACCATCATCG+AGG 0.756754 3_4:-10118777 None:intergenic
GTGGACGCTAATCCTGAACG+CGG 0.765043 3_4:+10119431 Msa0489550:CDS
GAACATGGTGAACCACAGGG+TGG 0.772249 3_4:+10118282 Msa0489550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAGTTTTTTGAAAATTTTA+AGG + chr3_4:10115753-10115772 Msa0489550:intron 10.0%
!! ATAGGATTTAAAAAAATAAA+CGG - chr3_4:10116715-10116734 None:intergenic 10.0%
!!! TTTTTTCGTTGATAAATTTA+AGG + chr3_4:10115503-10115522 Msa0489550:intron 15.0%
!!! TAAACAAATCATGTTTTTAT+AGG - chr3_4:10115734-10115753 None:intergenic 15.0%
!!! TTTTTTGAAAATTTTAAGGT+TGG + chr3_4:10115757-10115776 Msa0489550:intron 15.0%
!!! ACAAAATCATTTTTTTTTGT+TGG + chr3_4:10115839-10115858 Msa0489550:intron 15.0%
!!! TTATTTTTTTTGGATGAAAT+TGG + chr3_4:10115874-10115893 Msa0489550:intron 15.0%
!! CATAAAAATTTGATCTTTAT+AGG + chr3_4:10115935-10115954 Msa0489550:intron 15.0%
!!! TTAAGGTTTTATGATTATTA+CGG + chr3_4:10116572-10116591 Msa0489550:intron 15.0%
!!! ATATAAATCTAGTTCATATT+TGG - chr3_4:10117737-10117756 None:intergenic 15.0%
!!! AGATTTATATATTTTTCTTC+TGG + chr3_4:10117747-10117766 Msa0489550:intron 15.0%
!! AAATGATTGAACATAAGAAT+CGG - chr3_4:10115299-10115318 None:intergenic 20.0%
!!! TTGTTTGTTTGATGATTTTA+AGG + chr3_4:10115461-10115480 Msa0489550:intron 20.0%
!!! TTTGTTACATTTTGTGAAAT+GGG + chr3_4:10115543-10115562 Msa0489550:intron 20.0%
!!! TGTCTTTGTGTTATTTTTTT+TGG + chr3_4:10115864-10115883 Msa0489550:intron 20.0%
!! AAATTTGATCTTTATAGGTT+AGG + chr3_4:10115940-10115959 Msa0489550:intron 20.0%
!!! ATTTTTTTAAATCCTATGCA+TGG + chr3_4:10116718-10116737 Msa0489550:intron 20.0%
!! CAAGAAAAATCTAAACATAA+TGG + chr3_4:10117005-10117024 Msa0489550:CDS 20.0%
!!! TTTTCTTTTACAATTGTAGT+AGG + chr3_4:10117135-10117154 Msa0489550:intron 20.0%
!! TTAGAATGAATGATAGTTTA+AGG - chr3_4:10117197-10117216 None:intergenic 20.0%
!!! CTCTAAAGTATATGAAAAAT+TGG + chr3_4:10117283-10117302 Msa0489550:intron 20.0%
!!! TGTAGTTTTTGTTAAAATCA+CGG - chr3_4:10117656-10117675 None:intergenic 20.0%
!!! TTTTAACAAAAACTACACTT+TGG + chr3_4:10117659-10117678 Msa0489550:intron 20.0%
!!! AGAATAAAATTTTACATGTG+AGG - chr3_4:10119524-10119543 None:intergenic 20.0%
!! TCTCTTACATATTCTTTAAA+AGG + chr3_4:10119541-10119560 Msa0489550:three_prime_UTR 20.0%
!! TTATGTTCAATCATTTCTAG+TGG + chr3_4:10115303-10115322 Msa0489550:five_prime_UTR 25.0%
! TAAAAAGAAAAAACCACACA+AGG - chr3_4:10115340-10115359 None:intergenic 25.0%
! TTTACAATTCTTCACTTCTT+AGG + chr3_4:10115371-10115390 Msa0489550:five_prime_UTR 25.0%
!!! TTTGATGATTTTAAGGATTG+TGG + chr3_4:10115468-10115487 Msa0489550:intron 25.0%
!!! GTTTGTTACATTTTGTGAAA+TGG + chr3_4:10115542-10115561 Msa0489550:intron 25.0%
!!! GTTTTTTTTTGTTTGGTCTT+AGG + chr3_4:10115570-10115589 Msa0489550:intron 25.0%
! AATTGGAGTTCTGTAATATT+TGG + chr3_4:10115891-10115910 Msa0489550:intron 25.0%
! TTATGAATCTGTCAAATTTC+AGG + chr3_4:10116902-10116921 Msa0489550:intron 25.0%
! AAGTTTCCATTTGTTTCAAA+CGG + chr3_4:10116948-10116967 Msa0489550:CDS 25.0%
!! TTTTACAATTGTAGTAGGTT+TGG + chr3_4:10117140-10117159 Msa0489550:intron 25.0%
! TAGTTTAAGGACTAAATTGA+TGG - chr3_4:10117184-10117203 None:intergenic 25.0%
!! TACTTTAGAGACTAAATTGA+CGG - chr3_4:10117273-10117292 None:intergenic 25.0%
! ATTTACTTCTCAAATCAACA+TGG + chr3_4:10117452-10117471 Msa0489550:intron 25.0%
! ATGTAAACTTGAATTGTGTA+CGG - chr3_4:10117521-10117540 None:intergenic 25.0%
! TTGGAACTTCAATTAAAACA+CGG + chr3_4:10117678-10117697 Msa0489550:intron 25.0%
! AAAAGACAATTCTACACATT+TGG + chr3_4:10117939-10117958 Msa0489550:CDS 25.0%
! GGATATAATTGGAGAAAATA+TGG + chr3_4:10118045-10118064 Msa0489550:CDS 25.0%
! TATAGATTATCTCCGTTATA+TGG - chr3_4:10118170-10118189 None:intergenic 25.0%
!! TATAACGGAGATAATCTATA+AGG + chr3_4:10118170-10118189 Msa0489550:CDS 25.0%
!! ATAACGGAGATAATCTATAA+GGG + chr3_4:10118171-10118190 Msa0489550:CDS 25.0%
!!! ATTTTGAGTTTGCAAATTGT+TGG - chr3_4:10118427-10118446 None:intergenic 25.0%
! AACAATTTGCAAACTCAAAA+TGG + chr3_4:10118426-10118445 Msa0489550:CDS 25.0%
!! TACATTTTCAAATGAAGAAG+AGG + chr3_4:10118491-10118510 Msa0489550:CDS 25.0%
! TACTTCATACTATTCATTGT+TGG + chr3_4:10118591-10118610 Msa0489550:intron 25.0%
!! GTTGTTCATTTTGAATATCT+TGG - chr3_4:10118655-10118674 None:intergenic 25.0%
! CATTATTCTTCACATGTTAA+AGG + chr3_4:10119660-10119679 Msa0489550:three_prime_UTR 25.0%
TTCTTACCTTTGTGTATGAA+TGG - chr3_4:10115188-10115207 None:intergenic 30.0%
!!! TTTTTTGGTTCATTGCAACA+AGG - chr3_4:10115644-10115663 None:intergenic 30.0%
AAAACGCTAAAATGAATCAC+AGG - chr3_4:10115800-10115819 None:intergenic 30.0%
!! TTCATTTTAGCGTTTTGTTG+AGG + chr3_4:10115804-10115823 Msa0489550:intron 30.0%
GATGAAAATCTTGCACTAAA+TGG + chr3_4:10115999-10116018 Msa0489550:CDS 30.0%
TTCTAGCAGTCTAGAAAAAA+GGG - chr3_4:10116057-10116076 None:intergenic 30.0%
! ATAACTTGTATCGCTCAATT+GGG - chr3_4:10116162-10116181 None:intergenic 30.0%
!! TAATGGATTGTACTTCATCT+AGG - chr3_4:10116501-10116520 None:intergenic 30.0%
TTATGTGTCATGAGCAATAA+TGG - chr3_4:10116518-10116537 None:intergenic 30.0%
GACACATAACATTTCATCAT+AGG + chr3_4:10116529-10116548 Msa0489550:intron 30.0%
TGCTGATGCAATTTAAATCA+CGG + chr3_4:10116641-10116660 Msa0489550:intron 30.0%
TAATGTTGCAATTGTGAACA+AGG + chr3_4:10116769-10116788 Msa0489550:intron 30.0%
AATGTTGCAATTGTGAACAA+GGG + chr3_4:10116770-10116789 Msa0489550:intron 30.0%
!! TGACGGATTTCATATACTTT+GGG - chr3_4:10117256-10117275 None:intergenic 30.0%
!! TTGACGGATTTCATATACTT+TGG - chr3_4:10117257-10117276 None:intergenic 30.0%
!!! TGACGGATTTTATATACTTC+AGG + chr3_4:10117345-10117364 Msa0489550:intron 30.0%
ATGTAGTGACTAAATTGAAG+AGG + chr3_4:10117385-10117404 Msa0489550:intron 30.0%
TGTAGTGACTAAATTGAAGA+GGG + chr3_4:10117386-10117405 Msa0489550:intron 30.0%
!! ATTAATTGATAGCCTTGTCT+AGG + chr3_4:10117571-10117590 Msa0489550:intron 30.0%
! AGTTTTTGTTAAAATCACGG+TGG - chr3_4:10117653-10117672 None:intergenic 30.0%
TGTATTCATCTGCAAATTGA+AGG - chr3_4:10117785-10117804 None:intergenic 30.0%
! TGTGTAGAATTGTCTTTTTG+AGG - chr3_4:10117937-10117956 None:intergenic 30.0%
! CGTTCTACTTTCTTTTTAAC+CGG - chr3_4:10118135-10118154 None:intergenic 30.0%
TAACGGAGATAATCTATAAG+GGG + chr3_4:10118172-10118191 Msa0489550:CDS 30.0%
TGTATCATTAGGTTATGATG+CGG + chr3_4:10118539-10118558 Msa0489550:CDS 30.0%
ATGAATCAGAGTCTAAAAGA+AGG + chr3_4:10118568-10118587 Msa0489550:CDS 30.0%
AATGAACAACTTATTCTCTC+AGG + chr3_4:10118665-10118684 Msa0489550:intron 30.0%
!!! CAGCTATATTTTGACACAAT+GGG - chr3_4:10118925-10118944 None:intergenic 30.0%
!!! TCAGCTATATTTTGACACAA+TGG - chr3_4:10118926-10118945 None:intergenic 30.0%
!! ATAGCTGAATGTTTCTGTTT+TGG + chr3_4:10118938-10118957 Msa0489550:intron 30.0%
!! TAGCTGAATGTTTCTGTTTT+GGG + chr3_4:10118939-10118958 Msa0489550:intron 30.0%
ATGTAGTGATCACAGATTTA+AGG - chr3_4:10119037-10119056 None:intergenic 30.0%
TGTAATGATCAGACATACAT+AGG + chr3_4:10119604-10119623 Msa0489550:three_prime_UTR 30.0%
CTTGAATGAAAGAAAATCAG+CGG - chr3_4:10119701-10119720 None:intergenic 30.0%
GTTCATCCATTCATACACAA+AGG + chr3_4:10115179-10115198 Msa0489550:five_prime_UTR 35.0%
! AGAGACCCAGATACAATTTT+GGG + chr3_4:10115252-10115271 Msa0489550:five_prime_UTR 35.0%
!! TGTTCAATCATTTCTAGTGG+TGG + chr3_4:10115306-10115325 Msa0489550:five_prime_UTR 35.0%
!!! GGGTCGTGTTTTTTTTTGTT+TGG + chr3_4:10115563-10115582 Msa0489550:intron 35.0%
!! TAGGTGTTTTTGATACAGTG+AGG + chr3_4:10115959-10115978 Msa0489550:five_prime_UTR 35.0%
TTGATACAGTGAGGTTTGAA+TGG + chr3_4:10115968-10115987 Msa0489550:exon 35.0%
ATCTTGCACTAAATGGTGAT+TGG + chr3_4:10116006-10116025 Msa0489550:CDS 35.0%
TCTTGCACTAAATGGTGATT+GGG + chr3_4:10116007-10116026 Msa0489550:CDS 35.0%
CTTCTAGCAGTCTAGAAAAA+AGG - chr3_4:10116058-10116077 None:intergenic 35.0%
! GATAACTTGTATCGCTCAAT+TGG - chr3_4:10116163-10116182 None:intergenic 35.0%
! GGAGAATCTAAAAGTGTAGT+AGG - chr3_4:10116350-10116369 None:intergenic 35.0%
AATGAATTTGCAAGGAACAC+GGG - chr3_4:10116371-10116390 None:intergenic 35.0%
CAATGAATTTGCAAGGAACA+CGG - chr3_4:10116372-10116391 None:intergenic 35.0%
AACTCACCAATGAATTTGCA+AGG - chr3_4:10116379-10116398 None:intergenic 35.0%
TAGGATAGACAACAACATGT+AGG + chr3_4:10116548-10116567 Msa0489550:intron 35.0%
AGGATAGACAACAACATGTA+GGG + chr3_4:10116549-10116568 Msa0489550:intron 35.0%
TGCAATTTAAATCACGGTCT+CGG + chr3_4:10116647-10116666 Msa0489550:intron 35.0%
TTAAATACACAGCCATGCAT+AGG - chr3_4:10116733-10116752 None:intergenic 35.0%
TGACAGATTCATAACTCAGT+AGG - chr3_4:10116896-10116915 None:intergenic 35.0%
AATGGAAACTTTCCTGTTGT+TGG - chr3_4:10116939-10116958 None:intergenic 35.0%
! ATGTTGCCGTTTGAAACAAA+TGG - chr3_4:10116957-10116976 None:intergenic 35.0%
AGTCCTTTGCATCTTAATAG+TGG + chr3_4:10117313-10117332 Msa0489550:intron 35.0%
GTCCTTTGCATCTTAATAGT+GGG + chr3_4:10117314-10117333 Msa0489550:intron 35.0%
TCCTTTGCATCTTAATAGTG+GGG + chr3_4:10117315-10117334 Msa0489550:intron 35.0%
! AATAGTGGGGACTAAATTGA+CGG + chr3_4:10117328-10117347 Msa0489550:intron 35.0%
GTAGTGACTAAATTGAAGAG+GGG + chr3_4:10117387-10117406 Msa0489550:intron 35.0%
TAGTGACTAAATTGAAGAGG+GGG + chr3_4:10117388-10117407 Msa0489550:intron 35.0%
CATATATCATTGCCTAGACA+AGG - chr3_4:10117586-10117605 None:intergenic 35.0%
CTTGTCTAGGCAATGATATA+TGG + chr3_4:10117584-10117603 Msa0489550:intron 35.0%
TGGATGCATGTTTAGATTGA+AGG + chr3_4:10117604-10117623 Msa0489550:intron 35.0%
!! TCAATCTCAAAGAGTTGATG+CGG + chr3_4:10117849-10117868 Msa0489550:CDS 35.0%
!! GTAGAATTGTCTTTTTGAGG+TGG - chr3_4:10117934-10117953 None:intergenic 35.0%
ATATGGCCAAAAGCAAGTTA+AGG + chr3_4:10118062-10118081 Msa0489550:CDS 35.0%
TATGGCCAAAAGCAAGTTAA+GGG + chr3_4:10118063-10118082 Msa0489550:CDS 35.0%
TACACTTGTAGTAACTTCGA+GGG - chr3_4:10118098-10118117 None:intergenic 35.0%
GTGTACTCATTCAAATTGTC+CGG + chr3_4:10118113-10118132 Msa0489550:CDS 35.0%
AAAGTAGAACGTTCTCATGA+GGG + chr3_4:10118144-10118163 Msa0489550:CDS 35.0%
AACGGAGATAATCTATAAGG+GGG + chr3_4:10118173-10118192 Msa0489550:CDS 35.0%
GAGTTTGCAAATTGTTGGAT+TGG - chr3_4:10118422-10118441 None:intergenic 35.0%
! ACTCATGGTAGTGTATCATT+AGG + chr3_4:10118528-10118547 Msa0489550:CDS 35.0%
AACTTATTCTCTCAGGAAAC+TGG + chr3_4:10118672-10118691 Msa0489550:intron 35.0%
! ATATCCTCGATGATGGTTAT+CGG + chr3_4:10118773-10118792 Msa0489550:CDS 35.0%
TATGGACAGAAAGTTGTCAA+AGG + chr3_4:10118805-10118824 Msa0489550:CDS 35.0%
TCGATAAGAATGACTACCTT+GGG - chr3_4:10118840-10118859 None:intergenic 35.0%
ATCGATAAGAATGACTACCT+TGG - chr3_4:10118841-10118860 None:intergenic 35.0%
!! AGCTGAATGTTTCTGTTTTG+GGG + chr3_4:10118940-10118959 Msa0489550:intron 35.0%
CATGAATCCCATTTCATTTG+CGG - chr3_4:10119390-10119409 None:intergenic 35.0%
AATGGGATTCATGTTACCAA+AGG + chr3_4:10119397-10119416 Msa0489550:CDS 35.0%
ATGGGATTCATGTTACCAAA+GGG + chr3_4:10119398-10119417 Msa0489550:CDS 35.0%
!! ATGAGCCATTTTGCATGTTA+AGG - chr3_4:10119460-10119479 None:intergenic 35.0%
ATTATGAATCACATGCCTCT+TGG + chr3_4:10119497-10119516 Msa0489550:CDS 35.0%
!!! CGCTGATTTTCTTTCATTCA+AGG + chr3_4:10119699-10119718 Msa0489550:three_prime_UTR 35.0%
! GAGAGACCCAGATACAATTT+TGG + chr3_4:10115251-10115270 Msa0489550:five_prime_UTR 40.0%
!! ACCCAGATACAATTTTGGGT+CGG + chr3_4:10115256-10115275 Msa0489550:five_prime_UTR 40.0%
!! ATACAATTTTGGGTCGGGTT+CGG + chr3_4:10115262-10115281 Msa0489550:five_prime_UTR 40.0%
ATACAGTGAGGTTTGAATGG+CGG + chr3_4:10115971-10115990 Msa0489550:exon 40.0%
CTTGCACTAAATGGTGATTG+GGG + chr3_4:10116008-10116027 Msa0489550:CDS 40.0%
AGTCTAGAAAAAAGGGACCT+TGG - chr3_4:10116050-10116069 None:intergenic 40.0%
ACGACCGAATTCAGAACATT+CGG + chr3_4:10116097-10116116 Msa0489550:CDS 40.0%
! CTTCCCGAATGTTCTGAATT+CGG - chr3_4:10116104-10116123 None:intergenic 40.0%
AATTCAGAACATTCGGGAAG+TGG + chr3_4:10116104-10116123 Msa0489550:CDS 40.0%
GATAGAATTGCTGCTAGAAC+TGG + chr3_4:10116221-10116240 Msa0489550:CDS 40.0%
TGCTCTCTGTATTCAACCTT+GGG - chr3_4:10116256-10116275 None:intergenic 40.0%
ATGCTCTCTGTATTCAACCT+TGG - chr3_4:10116257-10116276 None:intergenic 40.0%
CGTGTTCCTTGCAAATTCAT+TGG + chr3_4:10116370-10116389 Msa0489550:CDS 40.0%
! GAGAAAGCACATTTGTGTTG+TGG + chr3_4:10116418-10116437 Msa0489550:intron 40.0%
GACAACAACATGTAGGGTTA+AGG + chr3_4:10116555-10116574 Msa0489550:intron 40.0%
ATCAGCAGTCAACAATAGCT+AGG - chr3_4:10116628-10116647 None:intergenic 40.0%
CAGATTCATAACTCAGTAGG+AGG - chr3_4:10116893-10116912 None:intergenic 40.0%
AACTTTCCTGTTGTTGGAGA+TGG - chr3_4:10116933-10116952 None:intergenic 40.0%
! CCGATGATATTTCTGAGTTG+CGG - chr3_4:10116980-10116999 None:intergenic 40.0%
CCGCAACTCAGAAATATCAT+CGG + chr3_4:10116977-10116996 Msa0489550:CDS 40.0%
TTTCAAGCCTACAGCAGATT+CGG + chr3_4:10117058-10117077 Msa0489550:CDS 40.0%
CAGCACCTTGATAAAAAGAG+GGG - chr3_4:10117085-10117104 None:intergenic 40.0%
CCAGCACCTTGATAAAAAGA+GGG - chr3_4:10117086-10117105 None:intergenic 40.0%
ACCAGCACCTTGATAAAAAG+AGG - chr3_4:10117087-10117106 None:intergenic 40.0%
TCCCCACTATTAAGATGCAA+AGG - chr3_4:10117319-10117338 None:intergenic 40.0%
CTTCTCAAATCAACATGGCA+AGG + chr3_4:10117457-10117476 Msa0489550:intron 40.0%
TGAAGCTTCAACACCATGAA+GGG - chr3_4:10117827-10117846 None:intergenic 40.0%
CAAAAGTAGCCTCCATCTTA+AGG + chr3_4:10117891-10117910 Msa0489550:CDS 40.0%
AAAACTCTGCCTTAAGATGG+AGG - chr3_4:10117903-10117922 None:intergenic 40.0%
GAGGGAGAAAAAAGAGTCAA+CGG + chr3_4:10117979-10117998 Msa0489550:CDS 40.0%
CAATTATATCCATCCTCCGA+TGG - chr3_4:10118036-10118055 None:intergenic 40.0%
CATCGGAGGATGGATATAAT+TGG + chr3_4:10118034-10118053 Msa0489550:CDS 40.0%
!!! CACTACCCTTAACTTGCTTT+TGG - chr3_4:10118071-10118090 None:intergenic 40.0%
GTACACTTGTAGTAACTTCG+AGG - chr3_4:10118099-10118118 None:intergenic 40.0%
GAAAGTAGAACGTTCTCATG+AGG + chr3_4:10118143-10118162 Msa0489550:CDS 40.0%
TTCTCATGAGGGCCATATAA+CGG + chr3_4:10118155-10118174 Msa0489550:CDS 40.0%
GTACAGAAGGGAAATATAGC+TGG + chr3_4:10118333-10118352 Msa0489550:CDS 40.0%
ATATAGCTGGAGCTGGTAAT+TGG + chr3_4:10118346-10118365 Msa0489550:CDS 40.0%
!! GGTACTACTCACATTGATTC+AGG + chr3_4:10118447-10118466 Msa0489550:CDS 40.0%
TCATTAGGTTATGATGCGGA+AGG + chr3_4:10118543-10118562 Msa0489550:CDS 40.0%
GTAGTCTGAACAACAACTCT+AGG - chr3_4:10118742-10118761 None:intergenic 40.0%
GAAGTAGATATCCTCGATGA+TGG + chr3_4:10118766-10118785 Msa0489550:CDS 40.0%
AAGAATGACTACCTTGGGTT+GGG - chr3_4:10118835-10118854 None:intergenic 40.0%
TAAGAATGACTACCTTGGGT+TGG - chr3_4:10118836-10118855 None:intergenic 40.0%
! GTCCAATCTGTCGAATTTTG+TGG + chr3_4:10118898-10118917 Msa0489550:intron 40.0%
GACCACAAAATTCGACAGAT+TGG - chr3_4:10118903-10118922 None:intergenic 40.0%
ATCTGTGATCACTACATACG+AGG + chr3_4:10119040-10119059 Msa0489550:CDS 40.0%
TCTGTGATCACTACATACGA+GGG + chr3_4:10119041-10119060 Msa0489550:CDS 40.0%
ATGGTTCAGGTCTATGCATA+TGG - chr3_4:10119166-10119185 None:intergenic 40.0%
TTGTGAACTTGAGATGGTTC+AGG - chr3_4:10119179-10119198 None:intergenic 40.0%
GAACCATCTCAAGTTCACAA+CGG + chr3_4:10119179-10119198 Msa0489550:CDS 40.0%
! TGCATCATGAATGGGTTCAT+AGG - chr3_4:10119350-10119369 None:intergenic 40.0%
GTTGTTGCTGCATCATGAAT+GGG - chr3_4:10119358-10119377 None:intergenic 40.0%
TGTTGTTGCTGCATCATGAA+TGG - chr3_4:10119359-10119378 None:intergenic 40.0%
! TTTTACATGTGAGGTCCAAG+AGG - chr3_4:10119515-10119534 None:intergenic 40.0%
CCCGACCCAAAATTGTATCT+GGG - chr3_4:10115260-10115279 None:intergenic 45.0%
!! CCCAGATACAATTTTGGGTC+GGG + chr3_4:10115257-10115276 Msa0489550:five_prime_UTR 45.0%
ACCCGACCCAAAATTGTATC+TGG - chr3_4:10115261-10115280 None:intergenic 45.0%
!! TACAATTTTGGGTCGGGTTC+GGG + chr3_4:10115263-10115282 Msa0489550:five_prime_UTR 45.0%
TACAGTGAGGTTTGAATGGC+GGG + chr3_4:10115972-10115991 Msa0489550:exon 45.0%
GAAAAAAGGGACCTTGGACT+TGG - chr3_4:10116044-10116063 None:intergenic 45.0%
CGACCGAATTCAGAACATTC+GGG + chr3_4:10116098-10116117 Msa0489550:CDS 45.0%
TGTATCGCTCAATTGGGTAC+CGG - chr3_4:10116156-10116175 None:intergenic 45.0%
GAACTGGATTTAATGCCCCA+AGG + chr3_4:10116237-10116256 Msa0489550:CDS 45.0%
GCTCTCTGTATTCAACCTTG+GGG - chr3_4:10116255-10116274 None:intergenic 45.0%
CCAGGTGGTATAGTCAAGTA+TGG - chr3_4:10116320-10116339 None:intergenic 45.0%
CCATACTTGACTATACCACC+TGG + chr3_4:10116317-10116336 Msa0489550:CDS 45.0%
AGTGTAGTAGGACTAAGACC+AGG - chr3_4:10116338-10116357 None:intergenic 45.0%
GATTATTACGGTCGCAGTGA+CGG + chr3_4:10116584-10116603 Msa0489550:intron 45.0%
TTCAAGCCTACAGCAGATTC+GGG + chr3_4:10117059-10117078 Msa0489550:CDS 45.0%
! CCCTCTTTTTATCAAGGTGC+TGG + chr3_4:10117083-10117102 Msa0489550:CDS 45.0%
AAGAGGGGGTGATAGTTTGA+TGG + chr3_4:10117402-10117421 Msa0489550:intron 45.0%
CTTTCTCAGCAATCCCTTCA+TGG + chr3_4:10117811-10117830 Msa0489550:CDS 45.0%
CTGAAGCTTCAACACCATGA+AGG - chr3_4:10117828-10117847 None:intergenic 45.0%
CGGAAAACTCTGCCTTAAGA+TGG - chr3_4:10117906-10117925 None:intergenic 45.0%
GAAGAGCAAGCAGATGAAGA+GGG + chr3_4:10117961-10117980 Msa0489550:CDS 45.0%
CAAGTGGACAATCCTGAACA+TGG + chr3_4:10118267-10118286 Msa0489550:CDS 45.0%
AAGGGAAATATAGCTGGAGC+TGG + chr3_4:10118339-10118358 Msa0489550:CDS 45.0%
! TGACAGCTGATGTTGCTTCA+AGG - chr3_4:10118383-10118402 None:intergenic 45.0%
!! TTGGATTGGTTACCGTATCC+GGG - chr3_4:10118408-10118427 None:intergenic 45.0%
!! GTTGGATTGGTTACCGTATC+CGG - chr3_4:10118409-10118428 None:intergenic 45.0%
!! CATTGATTCAGGAGATGCAG+TGG + chr3_4:10118458-10118477 Msa0489550:CDS 45.0%
GAAGAAGAGGAAGACGATCA+AGG + chr3_4:10118504-10118523 Msa0489550:CDS 45.0%
GAATCATATGCCGAGATGAG+TGG + chr3_4:10118694-10118713 Msa0489550:CDS 45.0%
TCTAGTAGCTCCACTCATCT+CGG - chr3_4:10118707-10118726 None:intergenic 45.0%
ATCGAGGATATCTACTTCGC+TGG - chr3_4:10118764-10118783 None:intergenic 45.0%
TCAAAGGAAATCCCAACCCA+AGG + chr3_4:10118821-10118840 Msa0489550:CDS 45.0%
!!! ATGTTTCTGTTTTGGGGTGC+AGG + chr3_4:10118946-10118965 Msa0489550:intron 45.0%
TACTACAAGTGCACCAATGC+AGG + chr3_4:10118972-10118991 Msa0489550:CDS 45.0%
ACTACAAGTGCACCAATGCA+GGG + chr3_4:10118973-10118992 Msa0489550:CDS 45.0%
AATGCTTCTAACGCAGCTCA+AGG + chr3_4:10119116-10119135 Msa0489550:CDS 45.0%
ATGCCGTTGTGAACTTGAGA+TGG - chr3_4:10119185-10119204 None:intergenic 45.0%
AACCTTGCAATGTCGGGATT+GGG + chr3_4:10119293-10119312 Msa0489550:CDS 45.0%
! AATGGGTTCATAGGCATTCC+AGG - chr3_4:10119341-10119360 None:intergenic 45.0%
ACCAAAGGGAGAACCAAATG+TGG + chr3_4:10119412-10119431 Msa0489550:CDS 45.0%
!! TCCACATTTGGTTCTCCCTT+TGG - chr3_4:10119416-10119435 None:intergenic 45.0%
! TCAGGATTAGCGTCCACATT+TGG - chr3_4:10119428-10119447 None:intergenic 45.0%
!!! AAAAAAAAATCATTTTTTTT+TGG - chr3_4:10115659-10115678 None:intergenic 5.0%
!! TATTATTTATATATAGTTTA+GGG - chr3_4:10117226-10117245 None:intergenic 5.0%
!! TTATTATTTATATATAGTTT+AGG - chr3_4:10117227-10117246 None:intergenic 5.0%
!!! TTTTTTTTCAAAAATAAAAA+AGG - chr3_4:10118621-10118640 None:intergenic 5.0%
GGTGGTTGAACTTCCTTGTG+TGG + chr3_4:10115324-10115343 Msa0489550:five_prime_UTR 50.0%
ACAGTGAGGTTTGAATGGCG+GGG + chr3_4:10115973-10115992 Msa0489550:exon 50.0%
GTCTTCCTAGTCCAAGTCCA+AGG + chr3_4:10116030-10116049 Msa0489550:CDS 50.0%
TTCGGGAAGTGGTAGAACTG+AGG + chr3_4:10116115-10116134 Msa0489550:CDS 50.0%
TCGGGAAGTGGTAGAACTGA+GGG + chr3_4:10116116-10116135 Msa0489550:CDS 50.0%
GGTAGAACTGAGGGACAAGA+TGG + chr3_4:10116125-10116144 Msa0489550:CDS 50.0%
GAGGGACAAGATGGTGATTC+CGG + chr3_4:10116134-10116153 Msa0489550:CDS 50.0%
! GAACTCGACTTGTTCTCGGT+TGG - chr3_4:10116185-10116204 None:intergenic 50.0%
GTAGTAGGACTAAGACCAGG+TGG - chr3_4:10116335-10116354 None:intergenic 50.0%
TAAACGGTAGACCACGACCT+GGG - chr3_4:10116699-10116718 None:intergenic 50.0%
ATAAACGGTAGACCACGACC+TGG - chr3_4:10116700-10116719 None:intergenic 50.0%
! TCGGGCCCCTCTTTTTATCA+AGG + chr3_4:10117077-10117096 Msa0489550:CDS 50.0%
!!! GTCTTTTTGAGGTGGCGAGT+CGG - chr3_4:10117926-10117945 None:intergenic 50.0%
GGAAGAGCAAGCAGATGAAG+AGG + chr3_4:10117960-10117979 Msa0489550:CDS 50.0%
AAGAGTCAACGGAGACTCGT+TGG + chr3_4:10117990-10118009 Msa0489550:CDS 50.0%
TAGTTGACCCTATGCCTGAC+CGG - chr3_4:10118230-10118249 None:intergenic 50.0%
CCACTTGCATGTCAGCATGA+GGG - chr3_4:10118254-10118273 None:intergenic 50.0%
TCCACTTGCATGTCAGCATG+AGG - chr3_4:10118255-10118274 None:intergenic 50.0%
TCCTGAACATGGTGAACCAC+AGG + chr3_4:10118278-10118297 Msa0489550:CDS 50.0%
CCTGAACATGGTGAACCACA+GGG + chr3_4:10118279-10118298 Msa0489550:CDS 50.0%
TCTGTACATTAGCCCAGCCT+AGG - chr3_4:10118320-10118339 None:intergenic 50.0%
AGGCTGGGCTAATGTACAGA+AGG + chr3_4:10118320-10118339 Msa0489550:CDS 50.0%
GGCTGGGCTAATGTACAGAA+GGG + chr3_4:10118321-10118340 Msa0489550:CDS 50.0%
!! TGGATTGGTTACCGTATCCG+GGG - chr3_4:10118407-10118426 None:intergenic 50.0%
! GAAGACGATCAAGGCACTCA+TGG + chr3_4:10118513-10118532 Msa0489550:CDS 50.0%
AACAACTCTAGGCTCGCGAA+TGG - chr3_4:10118731-10118750 None:intergenic 50.0%
! TCCTCGATGATGGTTATCGG+TGG + chr3_4:10118776-10118795 Msa0489550:CDS 50.0%
! TCGATGATGGTTATCGGTGG+CGG + chr3_4:10118779-10118798 Msa0489550:CDS 50.0%
!! GGTTATCGGTGGCGGAAATA+TGG + chr3_4:10118787-10118806 Msa0489550:CDS 50.0%
! GTGCACTGTAAGGAAGCATG+TGG + chr3_4:10118995-10119014 Msa0489550:CDS 50.0%
! ATTCGCATTGACGTGACTGC+TGG - chr3_4:10119099-10119118 None:intergenic 50.0%
TCTAACGCAGCTCAAGGACA+AGG + chr3_4:10119122-10119141 Msa0489550:CDS 50.0%
CTCAAGTTCACAACGGCATG+AGG + chr3_4:10119186-10119205 Msa0489550:CDS 50.0%
AGGTTGAACGAACCAAGCGA+AGG - chr3_4:10119212-10119231 None:intergenic 50.0%
! CTTGGTTCGTTCAACCTTCC+CGG + chr3_4:10119215-10119234 Msa0489550:CDS 50.0%
! TTGGTTCGTTCAACCTTCCC+GGG + chr3_4:10119216-10119235 Msa0489550:CDS 50.0%
GGTCATCCACATGGCTTCTT+CGG + chr3_4:10119251-10119270 Msa0489550:CDS 50.0%
TTCATGCCGAAGAAGCCATG+TGG - chr3_4:10119260-10119279 None:intergenic 50.0%
CCTGTCGAACCTTGCAATGT+CGG + chr3_4:10119286-10119305 Msa0489550:CDS 50.0%
CTGTCGAACCTTGCAATGTC+GGG + chr3_4:10119287-10119306 Msa0489550:CDS 50.0%
GAACCTTGCAATGTCGGGAT+TGG + chr3_4:10119292-10119311 Msa0489550:CDS 50.0%
GAAGCTTTGCTTGCGAGGAA+GGG - chr3_4:10119319-10119338 None:intergenic 50.0%
CAACGCGCCGCAAATGAAAT+GGG + chr3_4:10119380-10119399 Msa0489550:CDS 50.0%
GGCGGCCTTAACATGCAAAA+TGG + chr3_4:10119452-10119471 Msa0489550:CDS 50.0%
AGGGACCTTGGACTTGGACT+AGG - chr3_4:10116038-10116057 None:intergenic 55.0%
! CCGCGAACTCGACTTGTTCT+CGG - chr3_4:10116189-10116208 None:intergenic 55.0%
CCGAGAACAAGTCGAGTTCG+CGG + chr3_4:10116186-10116205 Msa0489550:CDS 55.0%
CGAGAACAAGTCGAGTTCGC+GGG + chr3_4:10116187-10116206 Msa0489550:CDS 55.0%
GAGAACAAGTCGAGTTCGCG+GGG + chr3_4:10116188-10116207 Msa0489550:CDS 55.0%
! GGGCTGCGACATCATGGTTT+TGG - chr3_4:10116679-10116698 None:intergenic 55.0%
AAACCATGATGTCGCAGCCC+AGG + chr3_4:10116679-10116698 Msa0489550:intron 55.0%
GCACAGCCATCTCCAACAAC+AGG + chr3_4:10116924-10116943 Msa0489550:CDS 55.0%
! AACGGAGACTCGTTGGTTGC+TGG + chr3_4:10117997-10118016 Msa0489550:CDS 55.0%
! GACTCGTTGGTTGCTGGTGT+TGG + chr3_4:10118003-10118022 Msa0489550:CDS 55.0%
! TCGTTGGTTGCTGGTGTTGG+CGG + chr3_4:10118006-10118025 Msa0489550:CDS 55.0%
!! TGGTGTTGGCGGTACTCCAT+CGG + chr3_4:10118017-10118036 Msa0489550:CDS 55.0%
CCCTCATGCTGACATGCAAG+TGG + chr3_4:10118251-10118270 Msa0489550:CDS 55.0%
CCCTGTGGTTCACCATGTTC+AGG - chr3_4:10118282-10118301 None:intergenic 55.0%
GAACATGGTGAACCACAGGG+TGG + chr3_4:10118282-10118301 Msa0489550:CDS 55.0%
GCAACATCAGCTGTCAACCC+CGG + chr3_4:10118387-10118406 Msa0489550:CDS 55.0%
TCAGCTGTCAACCCCGGATA+CGG + chr3_4:10118393-10118412 Msa0489550:CDS 55.0%
GCCACCGATAACCATCATCG+AGG - chr3_4:10118780-10118799 None:intergenic 55.0%
CCTTACAGTGCACCCTGCAT+TGG - chr3_4:10118988-10119007 None:intergenic 55.0%
CCAATGCAGGGTGCACTGTA+AGG + chr3_4:10118985-10119004 Msa0489550:CDS 55.0%
GCAGCTCAAGGACAAGGTTC+TGG + chr3_4:10119128-10119147 Msa0489550:CDS 55.0%
ATGACCTAGCTGCTGTCTCC+CGG - chr3_4:10119237-10119256 None:intergenic 55.0%
CAGCAGCTAGGTCATCCACA+TGG + chr3_4:10119242-10119261 Msa0489550:CDS 55.0%
CCGACATTGCAAGGTTCGAC+AGG - chr3_4:10119289-10119308 None:intergenic 55.0%
GGAAGCTTTGCTTGCGAGGA+AGG - chr3_4:10119320-10119339 None:intergenic 55.0%
TCCTCGCAAGCAAAGCTTCC+TGG + chr3_4:10119320-10119339 Msa0489550:CDS 55.0%
TCCAGGAAGCTTTGCTTGCG+AGG - chr3_4:10119324-10119343 None:intergenic 55.0%
GCAACGCGCCGCAAATGAAA+TGG + chr3_4:10119379-10119398 Msa0489550:CDS 55.0%
GTGGACGCTAATCCTGAACG+CGG + chr3_4:10119431-10119450 Msa0489550:CDS 55.0%
! TGGGTCGGGTTCGGGTTTCT+CGG + chr3_4:10115271-10115290 Msa0489550:five_prime_UTR 60.0%
AACAAGTCGAGTTCGCGGGG+TGG + chr3_4:10116191-10116210 Msa0489550:CDS 60.0%
TGTTGGCGGTACTCCATCGG+AGG + chr3_4:10118020-10118039 Msa0489550:CDS 60.0%
GACTTGGAGGAGGTTTCGGG+TGG - chr3_4:10118206-10118225 None:intergenic 60.0%
! GGCGACTTGGAGGAGGTTTC+GGG - chr3_4:10118209-10118228 None:intergenic 60.0%
! CGGCGACTTGGAGGAGGTTT+CGG - chr3_4:10118210-10118229 None:intergenic 60.0%
CGAAACCTCCTCCAAGTCGC+CGG + chr3_4:10118208-10118227 Msa0489550:CDS 60.0%
CAAGTCGCCGGTCAGGCATA+GGG + chr3_4:10118220-10118239 Msa0489550:CDS 60.0%
TGACTGCTGGAACGAGCAGC+GGG - chr3_4:10119086-10119105 None:intergenic 60.0%
GTGACTGCTGGAACGAGCAG+CGG - chr3_4:10119087-10119106 None:intergenic 60.0%
AACGGCATGAGGCCTTCGCT+TGG + chr3_4:10119197-10119216 Msa0489550:CDS 60.0%
TGACCTAGCTGCTGTCTCCC+GGG - chr3_4:10119236-10119255 None:intergenic 60.0%
GGCCCAATCCCGACATTGCA+AGG - chr3_4:10119298-10119317 None:intergenic 60.0%
GACGCTAATCCTGAACGCGG+CGG + chr3_4:10119434-10119453 Msa0489550:CDS 60.0%
ATGTTAAGGCCGCCGCGTTC+AGG - chr3_4:10119446-10119465 None:intergenic 60.0%
CGACCTGGGCTGCGACATCA+TGG - chr3_4:10116685-10116704 None:intergenic 65.0%
TGATGTCGCAGCCCAGGTCG+TGG + chr3_4:10116685-10116704 Msa0489550:intron 65.0%
GAGGGGCCCGAATCTGCTGT+AGG - chr3_4:10117068-10117087 None:intergenic 65.0%
GGCGGTACTCCATCGGAGGA+TGG + chr3_4:10118024-10118043 Msa0489550:CDS 65.0%
! ATGCCTGACCGGCGACTTGG+AGG - chr3_4:10118219-10118238 None:intergenic 65.0%
CCTATGCCTGACCGGCGACT+TGG - chr3_4:10118222-10118241 None:intergenic 65.0%
CCAAGTCGCCGGTCAGGCAT+AGG + chr3_4:10118219-10118238 Msa0489550:CDS 65.0%
GGTGAACCACAGGGTGGCAG+TGG + chr3_4:10118288-10118307 Msa0489550:CDS 65.0%
GAACCACAGGGTGGCAGTGG+CGG + chr3_4:10118291-10118310 Msa0489550:CDS 65.0%
CAGTGGCGGTGACCTAGGCT+GGG + chr3_4:10118305-10118324 Msa0489550:CDS 65.0%
GACTGCTGGAACGAGCAGCG+GGG - chr3_4:10119085-10119104 None:intergenic 65.0%
CTAGCTGCTGTCTCCCGGGA+AGG - chr3_4:10119232-10119251 None:intergenic 65.0%
CTTCCCGGGAGACAGCAGCT+AGG + chr3_4:10119230-10119249 Msa0489550:CDS 65.0%
! CCTGACCGGCGACTTGGAGG+AGG - chr3_4:10118216-10118235 None:intergenic 70.0%
CCTCCTCCAAGTCGCCGGTC+AGG + chr3_4:10118213-10118232 Msa0489550:CDS 70.0%
TCACCGCCACTGCCACCCTG+TGG - chr3_4:10118297-10118316 None:intergenic 70.0%
GGTGGCAGTGGCGGTGACCT+AGG + chr3_4:10118300-10118319 Msa0489550:CDS 70.0%
GCAGTGGCGGTGACCTAGGC+TGG + chr3_4:10118304-10118323 Msa0489550:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 10115153 10119731 10115153 ID=Msa0489550;Name=Msa0489550
chr3_4 mRNA 10115153 10119731 10115153 ID=Msa0489550-mRNA-1;Parent=Msa0489550;Name=Msa0489550-mRNA-1;_AED=0.06;_eAED=0.06;_QI=270|1|1|1|0.8|0.66|6|199|702
chr3_4 exon 10115153 10115392 10115153 ID=Msa0489550-mRNA-1:exon:3276;Parent=Msa0489550-mRNA-1
chr3_4 exon 10115957 10116391 10115957 ID=Msa0489550-mRNA-1:exon:3277;Parent=Msa0489550-mRNA-1
chr3_4 exon 10116924 10117112 10116924 ID=Msa0489550-mRNA-1:exon:3278;Parent=Msa0489550-mRNA-1
chr3_4 exon 10117796 10118589 10117796 ID=Msa0489550-mRNA-1:exon:3279;Parent=Msa0489550-mRNA-1
chr3_4 exon 10118687 10118842 10118687 ID=Msa0489550-mRNA-1:exon:3280;Parent=Msa0489550-mRNA-1
chr3_4 exon 10118968 10119731 10118968 ID=Msa0489550-mRNA-1:exon:3281;Parent=Msa0489550-mRNA-1
chr3_4 five_prime_UTR 10115153 10115392 10115153 ID=Msa0489550-mRNA-1:five_prime_utr;Parent=Msa0489550-mRNA-1
chr3_4 five_prime_UTR 10115957 10115986 10115957 ID=Msa0489550-mRNA-1:five_prime_utr;Parent=Msa0489550-mRNA-1
chr3_4 CDS 10115987 10116391 10115987 ID=Msa0489550-mRNA-1:cds;Parent=Msa0489550-mRNA-1
chr3_4 CDS 10116924 10117112 10116924 ID=Msa0489550-mRNA-1:cds;Parent=Msa0489550-mRNA-1
chr3_4 CDS 10117796 10118589 10117796 ID=Msa0489550-mRNA-1:cds;Parent=Msa0489550-mRNA-1
chr3_4 CDS 10118687 10118842 10118687 ID=Msa0489550-mRNA-1:cds;Parent=Msa0489550-mRNA-1
chr3_4 CDS 10118968 10119532 10118968 ID=Msa0489550-mRNA-1:cds;Parent=Msa0489550-mRNA-1
chr3_4 three_prime_UTR 10119533 10119731 10119533 ID=Msa0489550-mRNA-1:three_prime_utr;Parent=Msa0489550-mRNA-1
Gene Sequence

>Msa0489550

ATGGCGGGGATTGATGAAAATCTTGCACTAAATGGTGATTGGGGTCTTCCTAGTCCAAGTCCAAGGTCCCTTTTTTCTAGACTGCTAGAAGAAGATAATAATAATGTAATACGACCGAATTCAGAACATTCGGGAAGTGGTAGAACTGAGGGACAAGATGGTGATTCCGGTACCCAATTGAGCGATACAAGTTATCCAACCGAGAACAAGTCGAGTTCGCGGGGTGGTCTTGTTGATAGAATTGCTGCTAGAACTGGATTTAATGCCCCAAGGTTGAATACAGAGAGCATTAGATCTACTGAACTCTCACTCAATTCTGAGATTCAGTCTCCATACTTGACTATACCACCTGGTCTTAGTCCTACTACACTTTTAGATTCTCCCGTGTTCCTTGCAAATTCATTGGCACAGCCATCTCCAACAACAGGAAAGTTTCCATTTGTTTCAAACGGCAACATCCGCAACTCAGAAATATCATCGGATGTTCAAGAAAAATCTAAACATAATGGCTTTAATGATATTTATGCATCTTCTTTCGCTTTCAAGCCTACAGCAGATTCGGGCCCCTCTTTTTATCAAGGTGCTGGTAGAAATATGAATACAACTACACTTTCTCAGCAATCCCTTCATGGTGTTGAAGCTTCAGTTCAATCTCAAAGAGTTGATGCGGTCAATGTTCAAACTGAGAACAAAAGTAGCCTCCATCTTAAGGCAGAGTTTTCCGACTCGCCACCTCAAAAAGACAATTCTACACATTTGGAAGAGCAAGCAGATGAAGAGGGAGAAAAAAGAGTCAACGGAGACTCGTTGGTTGCTGGTGTTGGCGGTACTCCATCGGAGGATGGATATAATTGGAGAAAATATGGCCAAAAGCAAGTTAAGGGTAGTGAGTACCCTCGAAGTTACTACAAGTGTACTCATTCAAATTGTCCGGTTAAAAAGAAAGTAGAACGTTCTCATGAGGGCCATATAACGGAGATAATCTATAAGGGGGCACACAACCACCCGAAACCTCCTCCAAGTCGCCGGTCAGGCATAGGGTCAACTAACCCTCATGCTGACATGCAAGTGGACAATCCTGAACATGGTGAACCACAGGGTGGCAGTGGCGGTGACCTAGGCTGGGCTAATGTACAGAAGGGAAATATAGCTGGAGCTGGTAATTGGAAGCATGACAACCTTGAAGCAACATCAGCTGTCAACCCCGGATACGGTAACCAATCCAACAATTTGCAAACTCAAAATGGTACTACTCACATTGATTCAGGAGATGCAGTGGATCGCTCGTCTACATTTTCAAATGAAGAAGAGGAAGACGATCAAGGCACTCATGGTAGTGTATCATTAGGTTATGATGCGGAAGGAGATGAATCAGAGTCTAAAAGAAGGAAACTGGAATCATATGCCGAGATGAGTGGAGCTACTAGAGCCATTCGCGAGCCTAGAGTTGTTGTTCAGACTACCAGCGAAGTAGATATCCTCGATGATGGTTATCGGTGGCGGAAATATGGACAGAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACCAATGCAGGGTGCACTGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTTAAATCTGTGATCACTACATACGAGGGAAAGCACAATCACGATGTCCCCGCTGCTCGTTCCAGCAGTCACGTCAATGCGAATGCTTCTAACGCAGCTCAAGGACAAGGTTCTGGTCTTCTTCAAAACCATATGCATAGACCTGAACCATCTCAAGTTCACAACGGCATGAGGCCTTCGCTTGGTTCGTTCAACCTTCCCGGGAGACAGCAGCTAGGTCATCCACATGGCTTCTTCGGCATGAATCAACACCTGTCGAACCTTGCAATGTCGGGATTGGGCCCTTCCTCGCAAGCAAAGCTTCCTGGAATGCCTATGAACCCATTCATGATGCAGCAACAACAGCAACGCGCCGCAAATGAAATGGGATTCATGTTACCAAAGGGAGAACCAAATGTGGACGCTAATCCTGAACGCGGCGGCCTTAACATGCAAAATGGCTCATCATCAATGTATCAAGATATTATGAATCACATGCCTCTTGGACCTCACATGTAA
Protein sequence

>Msa0489550

MAGIDENLALNGDWGLPSPSPRSLFSRLLEEDNNNVIRPNSEHSGSGRTEGQDGDSGTQLSDTSYPTENKSSSRGGLVDRIAARTGFNAPRLNTESIRSTELSLNSEIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFPFVSNGNIRNSEISSDVQEKSKHNGFNDIYASSFAFKPTADSGPSFYQGAGRNMNTTTLSQQSLHGVEASVQSQRVDAVNVQTENKSSLHLKAEFSDSPPQKDNSTHLEEQADEEGEKRVNGDSLVAGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHSNCPVKKKVERSHEGHITEIIYKGAHNHPKPPPSRRSGIGSTNPHADMQVDNPEHGEPQGGSGGDLGWANVQKGNIAGAGNWKHDNLEATSAVNPGYGNQSNNLQTQNGTTHIDSGDAVDRSSTFSNEEEEDDQGTHGSVSLGYDAEGDESESKRRKLESYAEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHVNANASNAAQGQGSGLLQNHMHRPEPSQVHNGMRPSLGSFNLPGRQQLGHPHGFFGMNQHLSNLAMSGLGPSSQAKLPGMPMNPFMMQQQQQRAANEMGFMLPKGEPNVDANPERGGLNMQNGSSSMYQDIMNHMPLGPHM*