AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0490240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0490240 MtrunA17_Chr3g0080861 96.941 523 13 1 1 523 1 520 0.0 1050
Msa0490240 MtrunA17_Chr8g0354661 55.556 540 206 8 1 519 2 528 0.0 554
Msa0490240 MtrunA17_Chr3g0099131 78.261 115 25 0 37 151 41 155 2.49e-60 207
Msa0490240 MtrunA17_Chr2g0322521 70.866 127 37 0 31 157 23 149 1.60e-58 199
Msa0490240 MtrunA17_Chr1g0154031 54.491 167 69 2 37 203 76 235 3.61e-55 191
Msa0490240 MtrunA17_Chr1g0192411 59.664 119 48 0 35 153 10 128 6.45e-46 166
Msa0490240 MtrunA17_Chr5g0410961 61.321 106 41 0 35 140 10 115 4.28e-45 162
Msa0490240 MtrunA17_Chr1g0203411 64.220 109 39 0 37 145 12 120 7.21e-45 159
Msa0490240 MtrunA17_Chr2g0281071 62.500 104 39 0 37 140 13 116 2.58e-44 159
Msa0490240 MtrunA17_Chr5g0395281 62.500 104 39 0 37 140 12 115 6.57e-44 157
Msa0490240 MtrunA17_Chr4g0048511 61.538 104 40 0 37 140 13 116 1.27e-43 158
Msa0490240 MtrunA17_Chr2g0323411 60.000 110 43 1 37 145 12 121 8.57e-43 155
Msa0490240 MtrunA17_Chr4g0039971 61.538 104 40 0 37 140 13 116 9.59e-43 155
Msa0490240 MtrunA17_Chr1g0167691 61.538 104 40 0 37 140 12 115 1.18e-42 152
Msa0490240 MtrunA17_Chr1g0209661 57.547 106 45 0 37 142 27 132 1.90e-42 154
Msa0490240 MtrunA17_Chr1g0194301 60.185 108 43 0 35 142 31 138 2.50e-42 152
Msa0490240 MtrunA17_Chr8g0349261 61.905 105 39 1 37 140 13 117 8.71e-42 151
Msa0490240 MtrunA17_Chr7g0228231 58.252 103 43 0 37 139 14 116 9.71e-42 148
Msa0490240 MtrunA17_Chr3g0099141 75.904 83 20 0 37 119 40 122 1.62e-41 145
Msa0490240 MtrunA17_Chr3g0115821 59.615 104 42 0 37 140 12 115 1.69e-41 152
Msa0490240 MtrunA17_Chr1g0186061 57.983 119 49 1 25 142 7 125 1.84e-41 149
Msa0490240 MtrunA17_Chr1g0168661 55.462 119 49 1 28 142 8 126 2.41e-41 149
Msa0490240 MtrunA17_Chr8g0346561 60.377 106 42 0 35 140 10 115 2.46e-41 150
Msa0490240 MtrunA17_Chr1g0187761 60.577 104 41 0 37 140 12 115 3.22e-41 149
Msa0490240 MtrunA17_Chr4g0068061 58.491 106 44 0 35 140 10 115 4.65e-41 150
Msa0490240 MtrunA17_Chr7g0275911 61.386 101 39 0 35 135 10 110 4.89e-41 148
Msa0490240 MtrunA17_Chr7g0217221 59.434 106 43 0 37 142 12 117 5.74e-41 148
Msa0490240 MtrunA17_Chr5g0435101 57.692 104 44 0 37 140 11 114 6.33e-41 146
Msa0490240 MtrunA17_Chr7g0217741 59.434 106 43 0 35 140 10 115 8.27e-41 149
Msa0490240 MtrunA17_Chr1g0194291 59.434 106 43 0 37 142 21 126 8.80e-41 147
Msa0490240 MtrunA17_Chr6g0450101 57.282 103 44 0 37 139 14 116 9.95e-41 145
Msa0490240 MtrunA17_Chr1g0193371 59.434 106 43 0 37 142 12 117 1.10e-40 150
Msa0490240 MtrunA17_Chr4g0022931 58.654 104 43 0 37 140 13 116 1.39e-40 147
Msa0490240 MtrunA17_Chr1g0167661 59.615 104 42 0 37 140 12 115 1.43e-40 147
Msa0490240 MtrunA17_Chr4g0037141 60.784 102 40 0 39 140 14 115 1.72e-40 147
Msa0490240 MtrunA17_Chr7g0261281 59.615 104 42 0 37 140 12 115 1.90e-40 147
Msa0490240 MtrunA17_Chr4g0070641 61.616 99 38 0 37 135 12 110 2.41e-40 143
Msa0490240 MtrunA17_Chr3g0131121 61.765 102 39 0 39 140 14 115 2.52e-40 147
Msa0490240 MtrunA17_Chr4g0070611 61.616 99 38 0 37 135 12 110 4.79e-40 147
Msa0490240 MtrunA17_Chr4g0060721 59.615 104 42 0 37 140 13 116 5.22e-40 147
Msa0490240 MtrunA17_Chr6g0453211 62.626 99 37 0 37 135 12 110 5.57e-40 147
Msa0490240 MtrunA17_Chr4g0042671 59.434 106 43 0 35 140 10 115 7.28e-40 149
Msa0490240 MtrunA17_Chr2g0309911 56.731 104 45 0 37 140 11 114 7.67e-40 146
Msa0490240 MtrunA17_Chr4g0022901 57.692 104 44 0 37 140 13 116 7.70e-40 145
Msa0490240 MtrunA17_Chr3g0121241 57.547 106 45 0 35 140 40 145 7.73e-40 146
Msa0490240 MtrunA17_Chr4g0022911 56.731 104 45 0 37 140 13 116 8.53e-40 146
Msa0490240 MtrunA17_Chr6g0453471 59.434 106 43 0 35 140 10 115 8.79e-40 147
Msa0490240 MtrunA17_Chr7g0274581 53.846 104 48 0 37 140 12 115 1.32e-39 142
Msa0490240 MtrunA17_Chr7g0270891 57.547 106 45 0 37 142 12 117 1.98e-39 147
Msa0490240 MtrunA17_Chr8g0387421 58.491 106 44 0 37 142 12 117 2.00e-39 145
Msa0490240 MtrunA17_Chr2g0328771 55.660 106 47 0 37 142 20 125 2.60e-39 145
Msa0490240 MtrunA17_Chr1g0151941 51.639 122 52 2 37 157 12 127 2.79e-39 143
Msa0490240 MtrunA17_Chr3g0110351 55.556 108 48 0 35 142 10 117 2.92e-39 145
Msa0490240 MtrunA17_Chr7g0254411 58.491 106 44 0 35 140 10 115 3.44e-39 145
Msa0490240 MtrunA17_Chr1g0193801 57.547 106 45 0 37 142 12 117 3.61e-39 147
Msa0490240 MtrunA17_Chr8g0385321 57.843 102 43 0 39 140 14 115 4.62e-39 144
Msa0490240 MtrunA17_Chr7g0228891 46.707 167 78 5 35 197 10 169 6.24e-39 143
Msa0490240 MtrunA17_Chr5g0434571 55.556 108 48 0 35 142 46 153 7.05e-39 145
Msa0490240 MtrunA17_Chr2g0311221 58.586 99 41 0 37 135 14 112 1.41e-38 144
Msa0490240 MtrunA17_Chr4g0057031 56.731 104 45 0 37 140 12 115 2.06e-38 141
Msa0490240 MtrunA17_Chr3g0092401 55.660 106 47 0 37 142 13 118 2.75e-38 142
Msa0490240 MtrunA17_Chr1g0211161 56.731 104 45 0 37 140 13 116 4.41e-38 139
Msa0490240 MtrunA17_Chr2g0330041 55.769 104 46 0 37 140 12 115 4.66e-38 144
Msa0490240 MtrunA17_Chr3g0117091 57.692 104 44 0 37 140 12 115 4.71e-38 142
Msa0490240 MtrunA17_Chr8g0342541 55.769 104 46 0 37 140 12 115 7.71e-38 142
Msa0490240 MtrunA17_Chr2g0323351 57.282 103 44 0 37 139 12 114 9.04e-38 139
Msa0490240 MtrunA17_Chr4g0032401 55.660 106 47 0 37 142 17 122 1.38e-37 141
Msa0490240 MtrunA17_Chr4g0058631 56.731 104 45 0 37 140 12 115 1.51e-37 141
Msa0490240 MtrunA17_Chr8g0342521 56.731 104 45 0 37 140 12 115 1.93e-37 141
Msa0490240 MtrunA17_Chr5g0440781 38.922 167 95 3 38 203 13 173 2.10e-37 136
Msa0490240 MtrunA17_Chr6g0452271 57.692 104 44 0 37 140 12 115 2.67e-37 140
Msa0490240 MtrunA17_Chr3g0088461 56.731 104 45 0 37 140 22 125 2.70e-37 140
Msa0490240 MtrunA17_Chr4g0044421 55.882 102 45 0 39 140 14 115 2.86e-37 136
Msa0490240 MtrunA17_Chr7g0271241 60.204 98 39 0 37 134 12 109 3.24e-37 141
Msa0490240 MtrunA17_Chr4g0022891 55.882 102 45 0 37 138 12 113 3.59e-37 137
Msa0490240 MtrunA17_Chr5g0397231 58.586 99 41 0 37 135 12 110 4.31e-37 140
Msa0490240 MtrunA17_Chr5g0440761 38.922 167 95 3 38 203 13 173 4.35e-37 137
Msa0490240 MtrunA17_Chr1g0194951 56.604 106 46 0 35 140 10 115 5.37e-37 140
Msa0490240 MtrunA17_Chr4g0028311 54.630 108 48 1 37 143 12 119 5.91e-37 139
Msa0490240 MtrunA17_Chr1g0152011 57.143 105 44 1 37 140 12 116 6.72e-37 139
Msa0490240 MtrunA17_Chr5g0441141 38.922 167 95 3 38 203 13 173 6.74e-37 137
Msa0490240 MtrunA17_Chr7g0264641 48.000 125 61 2 37 157 12 136 1.06e-36 137
Msa0490240 MtrunA17_Chr5g0400821 56.190 105 45 1 37 140 12 116 1.68e-36 137
Msa0490240 MtrunA17_Chr3g0103281 55.769 104 46 0 37 140 12 115 3.77e-36 137
Msa0490240 MtrunA17_Chr2g0327351 57.000 100 42 1 37 135 12 111 7.19e-36 136
Msa0490240 MtrunA17_Chr1g0180391 50.000 124 60 1 37 158 19 142 7.30e-36 133
Msa0490240 MtrunA17_Chr5g0441131 47.934 121 62 1 35 154 7 127 7.77e-36 132
Msa0490240 MtrunA17_Chr5g0417821 54.808 104 47 0 37 140 7 110 7.84e-36 135
Msa0490240 MtrunA17_Chr8g0343831 55.882 102 45 0 39 140 10 111 1.30e-35 133
Msa0490240 MtrunA17_Chr4g0054391 58.586 99 40 1 37 134 12 110 2.36e-35 134
Msa0490240 MtrunA17_Chr3g0135311 54.286 105 47 1 37 140 12 116 3.44e-35 135
Msa0490240 MtrunA17_Chr6g0487491 49.573 117 50 2 37 144 12 128 5.15e-35 132
Msa0490240 MtrunA17_Chr8g0334881 49.533 107 53 1 37 142 10 116 6.93e-35 133
Msa0490240 MtrunA17_Chr4g0055981 55.556 99 44 0 37 135 55 153 6.97e-35 130
Msa0490240 MtrunA17_Chr2g0293911 56.311 103 45 0 37 139 24 126 7.70e-35 133
Msa0490240 MtrunA17_Chr7g0269831 57.547 106 45 0 35 140 10 115 8.62e-35 134
Msa0490240 MtrunA17_Chr4g0022881 51.961 102 49 0 38 139 13 114 9.29e-35 130
Msa0490240 MtrunA17_Chr8g0342481 53.333 105 48 1 37 140 12 116 1.26e-34 134
Msa0490240 MtrunA17_Chr2g0327821 54.808 104 47 0 37 140 6 109 1.45e-34 130
Msa0490240 MtrunA17_Chr4g0068921 55.340 103 46 0 37 139 24 126 1.61e-34 128
Msa0490240 MtrunA17_Chr4g0072751 58.000 100 41 1 37 135 12 111 1.68e-34 133
Msa0490240 MtrunA17_Chr1g0203441 55.340 103 46 0 38 140 14 116 1.87e-34 130
Msa0490240 MtrunA17_Chr4g0013361 49.533 107 53 1 37 142 10 116 3.77e-34 130
Msa0490240 MtrunA17_Chr7g0220341 45.238 126 67 1 17 140 5 130 2.24e-33 128
Msa0490240 MtrunA17_Chr5g0434831 51.923 104 50 0 37 140 7 110 2.46e-33 125
Msa0490240 MtrunA17_Chr5g0434931 45.736 129 68 1 12 140 12 138 2.74e-33 128
Msa0490240 MtrunA17_Chr4g0030881 51.327 113 48 1 36 141 6 118 5.21e-33 126
Msa0490240 MtrunA17_Chr8g0360111 55.340 103 44 1 33 135 23 123 5.25e-33 126
Msa0490240 MtrunA17_Chr5g0434911 49.038 104 53 0 37 140 21 124 1.08e-31 123
Msa0490240 MtrunA17_Chr6g0470971 51.456 103 50 0 38 140 15 117 2.05e-31 122
Msa0490240 MtrunA17_Chr7g0240821 47.748 111 53 1 33 143 2 107 3.09e-31 120
Msa0490240 MtrunA17_Chr5g0434841 50.000 104 52 0 37 140 20 123 6.28e-31 122
Msa0490240 MtrunA17_Chr7g0247131 65.333 75 26 0 69 143 10 84 1.86e-30 119
Msa0490240 MtrunA17_Chr7g0228991 49.038 104 53 0 37 140 29 132 2.63e-30 119
Msa0490240 MtrunA17_Chr5g0395221 56.098 82 36 0 32 113 7 88 1.32e-27 105
Msa0490240 MtrunA17_Chr5g0429661 48.598 107 51 3 36 141 119 222 1.78e-27 113
Msa0490240 MtrunA17_Chr4g0042611 55.696 79 35 0 35 113 10 88 2.61e-27 105
Msa0490240 MtrunA17_Chr3g0133601 47.170 106 55 1 39 144 37 141 4.93e-27 108
Msa0490240 MtrunA17_Chr2g0294811 54.430 79 36 0 35 113 10 88 6.02e-27 105
Msa0490240 MtrunA17_Chr4g0008551 48.148 108 53 2 39 145 38 143 7.84e-27 111
Msa0490240 MtrunA17_Chr5g0401731 49.020 102 51 1 39 140 15 115 5.75e-26 108
Msa0490240 MtrunA17_Chr3g0117511 40.157 127 73 2 31 155 175 300 9.31e-26 110
Msa0490240 MtrunA17_Chr4g0058991 46.789 109 50 3 36 141 206 309 3.20e-25 108
Msa0490240 MtrunA17_Chr2g0323321 52.564 78 37 0 37 114 11 88 3.71e-25 100
Msa0490240 MtrunA17_Chr6g0453751 51.485 101 38 3 27 118 12 110 4.46e-25 100
Msa0490240 MtrunA17_Chr6g0454921 47.059 102 53 1 39 140 15 115 8.06e-25 102
Msa0490240 MtrunA17_Chr3g0139671 46.154 104 55 1 37 140 83 185 8.74e-25 108
Msa0490240 MtrunA17_Chr8g0342531 52.564 78 37 0 37 114 12 89 1.35e-24 100
Msa0490240 MtrunA17_Chr7g0228531 42.520 127 66 4 17 143 202 321 1.51e-24 106
Msa0490240 MtrunA17_Chr4g0053431 44.118 102 56 1 39 140 5 105 2.36e-24 102
Msa0490240 MtrunA17_Chr7g0238631 48.077 104 53 1 37 140 111 213 6.30e-24 105
Msa0490240 MtrunA17_Chr5g0425591 48.889 90 45 1 30 118 2 91 8.16e-24 95.5
Msa0490240 MtrunA17_Chr5g0437321 43.750 128 69 2 23 150 5 129 8.85e-24 101
Msa0490240 MtrunA17_Chr1g0157731 43.269 104 58 1 37 140 89 191 9.49e-24 105
Msa0490240 MtrunA17_Chr6g0460661 42.056 107 61 1 39 145 16 121 9.54e-24 97.8
Msa0490240 MtrunA17_Chr8g0342511 53.947 76 35 0 37 112 12 87 2.42e-23 94.4
Msa0490240 MtrunA17_Chr6g0480581 42.727 110 62 1 39 148 4 112 7.37e-23 97.4
Msa0490240 MtrunA17_Chr5g0434901 58.824 68 28 0 71 138 7 74 1.37e-22 93.2
Msa0490240 MtrunA17_Chr7g0254261 43.636 110 61 1 39 148 89 197 1.84e-22 99.0
Msa0490240 MtrunA17_Chr5g0417621 44.762 105 55 2 39 142 134 236 5.44e-22 98.6
Msa0490240 MtrunA17_Chr4g0042501 42.593 108 59 2 36 142 102 207 7.28e-22 98.2
Msa0490240 MtrunA17_Chr7g0229101 54.286 70 32 0 69 138 4 73 1.26e-21 93.2
Msa0490240 MtrunA17_Chr8g0342461 49.367 79 39 1 37 114 12 90 2.61e-21 90.1
Msa0490240 MtrunA17_Chr8g0342471 49.367 79 39 1 37 114 12 90 3.60e-21 89.7
Msa0490240 MtrunA17_Chr5g0397841 45.918 98 52 1 37 134 108 204 4.27e-21 96.3
Msa0490240 MtrunA17_Chr7g0229131 52.113 71 34 0 69 139 4 74 5.98e-21 90.1
Msa0490240 MtrunA17_Chr7g0228401 48.936 94 46 2 50 143 290 381 1.90e-20 94.4
Msa0490240 MtrunA17_Chr7g0238651 38.835 103 61 1 42 142 10 112 4.46e-20 92.0
Msa0490240 MtrunA17_Chr7g0228481 38.583 127 71 4 17 143 202 321 6.06e-20 92.4
Msa0490240 MtrunA17_Chr3g0125801 43.810 105 56 2 39 142 16 118 1.70e-19 89.0
Msa0490240 MtrunA17_Chr3g0093811 50.000 72 36 0 69 140 14 85 4.33e-19 87.4
Msa0490240 MtrunA17_Chr6g0460671 40.367 109 60 2 39 145 99 204 6.99e-19 88.2
Msa0490240 MtrunA17_Chr1g0177901 44.828 87 47 1 49 135 4 89 7.95e-18 82.4
Msa0490240 MtrunA17_Chr1g0193901 50.575 87 41 2 37 121 11 97 2.76e-17 77.8
Msa0490240 MtrunA17_Chr1g0193891 50.575 87 41 2 37 121 11 97 2.76e-17 77.8
Msa0490240 MtrunA17_Chr1g0193871 50.575 87 41 2 37 121 11 97 2.76e-17 77.8
Msa0490240 MtrunA17_Chr1g0193881 50.575 87 41 2 37 121 11 97 2.76e-17 77.8
Msa0490240 MtrunA17_Chr7g0233061 31.618 136 83 4 7 139 148 276 6.45e-17 82.4
Msa0490240 MtrunA17_Chr8g0362231 38.384 99 60 1 42 140 25 122 7.46e-16 79.7
Msa0490240 MtrunA17_Chr5g0416341 36.634 101 63 1 42 142 29 128 1.69e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0490240 AT3G11440.3 40.854 492 246 13 36 500 40 513 3.54e-99 310
Msa0490240 AT3G11440.4 40.854 492 246 13 36 500 40 513 3.54e-99 310
Msa0490240 AT3G11440.1 40.854 492 246 13 36 500 40 513 3.54e-99 310
Msa0490240 AT5G06100.5 40.246 487 235 12 34 500 29 479 1.72e-93 295
Msa0490240 AT5G06100.2 40.246 487 235 12 34 500 29 479 1.72e-93 295
Msa0490240 AT5G06100.3 40.246 487 235 12 34 500 29 479 1.72e-93 295
Msa0490240 AT5G06100.4 40.246 487 235 12 34 500 29 479 1.72e-93 295
Msa0490240 AT3G11440.2 45.093 377 179 9 36 387 40 413 5.58e-91 286
Msa0490240 AT5G06100.1 44.162 394 194 10 34 407 29 416 2.79e-90 284
Msa0490240 AT5G55020.1 79.339 121 25 0 32 152 21 141 7.61e-66 222
Msa0490240 AT2G32460.1 75.385 130 32 0 24 153 5 134 5.13e-65 219
Msa0490240 AT2G26960.1 39.216 357 160 11 37 365 20 347 1.87e-64 216
Msa0490240 AT2G32460.2 80.000 120 24 0 34 153 3 122 2.49e-64 217
Msa0490240 AT4G26930.1 75.194 129 26 1 23 151 11 133 3.85e-64 214
Msa0490240 AT4G21440.1 46.591 176 81 4 37 199 12 187 1.70e-44 160
Msa0490240 AT4G28110.1 60.909 110 42 1 37 145 12 121 3.16e-44 158
Msa0490240 AT3G02940.2 62.500 104 39 0 37 140 12 115 6.13e-44 158
Msa0490240 AT3G61250.1 63.208 106 39 0 35 140 10 115 8.33e-44 157
Msa0490240 AT3G02940.1 62.500 104 39 0 37 140 12 115 9.12e-44 158
Msa0490240 AT3G02940.3 62.500 104 39 0 37 140 12 115 9.12e-44 158
Msa0490240 AT4G05100.1 63.462 104 38 0 37 140 13 116 1.22e-43 157
Msa0490240 AT1G22640.1 62.500 104 39 0 37 140 12 115 2.29e-43 155
Msa0490240 AT4G09460.1 63.725 102 37 0 39 140 14 115 1.52e-42 152
Msa0490240 AT3G01530.1 60.194 103 41 0 37 139 25 127 1.87e-42 150
Msa0490240 AT5G16770.4 60.577 104 41 0 37 140 12 115 2.70e-42 154
Msa0490240 AT5G16770.3 60.577 104 41 0 37 140 12 115 2.70e-42 154
Msa0490240 AT5G40330.1 48.980 147 65 2 38 174 13 159 3.38e-42 150
Msa0490240 AT5G16770.1 60.577 104 41 0 37 140 12 115 3.62e-42 154
Msa0490240 AT5G16770.2 60.577 104 41 0 37 140 12 115 3.62e-42 154
Msa0490240 AT1G35515.1 61.538 104 40 0 37 140 12 115 9.07e-42 149
Msa0490240 AT3G13540.1 58.654 104 43 0 37 140 23 126 1.44e-41 150
Msa0490240 AT5G10280.1 61.538 104 40 0 37 140 12 115 1.61e-41 152
Msa0490240 AT5G14750.1 59.223 103 42 0 38 140 17 119 2.41e-41 147
Msa0490240 AT2G16720.1 61.538 104 40 0 37 140 12 115 2.99e-41 149
Msa0490240 AT1G34670.1 60.577 104 41 0 37 140 12 115 3.09e-41 152
Msa0490240 AT5G65230.1 58.654 104 43 0 37 140 12 115 3.50e-41 150
Msa0490240 AT5G54230.1 59.615 104 42 0 37 140 12 115 7.25e-41 150
Msa0490240 AT3G01140.2 60.577 104 41 0 37 140 12 115 8.93e-41 150
Msa0490240 AT2G31180.1 57.798 109 46 0 37 145 12 120 9.15e-41 147
Msa0490240 AT3G47600.1 57.407 108 46 0 35 142 10 117 1.61e-40 149
Msa0490240 AT3G23250.1 56.637 113 49 0 37 149 12 124 1.77e-40 148
Msa0490240 AT3G01140.1 60.577 104 41 0 37 140 55 158 1.99e-40 150
Msa0490240 AT1G66230.1 58.333 108 45 0 35 142 10 117 2.03e-40 147
Msa0490240 AT4G13480.1 59.813 107 43 0 36 142 5 111 2.09e-40 147
Msa0490240 AT3G27810.1 55.340 103 46 0 37 139 20 122 3.19e-40 145
Msa0490240 AT4G38620.1 60.784 102 40 0 39 140 14 115 3.21e-40 147
Msa0490240 AT5G49330.1 57.798 109 46 0 35 143 10 118 3.91e-40 149
Msa0490240 AT5G26660.1 47.619 147 65 3 37 171 12 158 4.55e-40 149
Msa0490240 AT5G15310.1 59.615 104 42 0 37 140 12 115 4.60e-40 148
Msa0490240 AT1G57560.2 57.692 104 44 0 37 140 12 115 4.76e-40 146
Msa0490240 AT5G62470.2 57.407 108 46 0 35 142 10 117 4.84e-40 149
Msa0490240 AT5G15310.4 59.615 104 42 0 37 140 12 115 5.14e-40 145
Msa0490240 AT4G01680.3 58.491 106 44 0 37 142 12 117 5.45e-40 145
Msa0490240 AT5G15310.2 59.615 104 42 0 37 140 12 115 5.55e-40 147
Msa0490240 AT5G40350.1 55.340 103 46 0 37 139 17 119 6.22e-40 144
Msa0490240 AT1G57560.1 57.692 104 44 0 37 140 12 115 6.65e-40 147
Msa0490240 AT3G13890.2 57.692 104 44 0 37 140 12 115 6.83e-40 148
Msa0490240 AT5G07690.1 56.604 106 46 0 34 139 9 114 7.62e-40 147
Msa0490240 AT4G34990.1 59.804 102 41 0 39 140 14 115 9.50e-40 145
Msa0490240 AT2G47190.1 55.660 106 47 0 37 142 20 125 1.02e-39 145
Msa0490240 AT1G74650.1 57.547 106 45 0 35 140 10 115 1.13e-39 147
Msa0490240 AT5G61420.2 56.075 107 47 0 34 140 9 115 1.15e-39 148
Msa0490240 AT3G28910.1 60.185 108 41 1 33 140 10 115 1.25e-39 147
Msa0490240 AT3G24310.1 58.491 106 44 0 38 143 19 124 1.42e-39 145
Msa0490240 AT1G06180.1 59.434 106 43 0 35 140 10 115 1.87e-39 144
Msa0490240 AT4G01680.1 58.491 106 44 0 37 142 12 117 1.88e-39 146
Msa0490240 AT5G07700.1 55.140 107 48 0 34 140 9 115 2.27e-39 146
Msa0490240 AT5G07700.2 55.140 107 48 0 34 140 9 115 2.27e-39 146
Msa0490240 AT3G27920.1 58.252 103 43 0 38 140 15 117 4.85e-39 142
Msa0490240 AT4G37780.1 56.075 107 46 1 35 140 10 116 5.03e-39 144
Msa0490240 AT1G48000.1 54.286 105 48 0 35 139 30 134 5.15e-39 142
Msa0490240 AT1G18570.1 60.577 104 41 0 37 140 13 116 5.39e-39 145
Msa0490240 AT1G68320.1 55.660 106 47 0 37 142 19 124 7.75e-39 143
Msa0490240 AT2G47460.1 57.547 106 45 0 35 140 10 115 8.22e-39 145
Msa0490240 AT5G12870.1 56.604 106 46 0 37 142 18 123 9.93e-39 143
Msa0490240 AT1G25340.1 49.600 125 57 1 18 142 5 123 1.07e-38 143
Msa0490240 AT1G08810.1 56.604 106 46 0 35 140 10 115 1.10e-38 143
Msa0490240 AT5G62470.1 57.407 108 45 1 35 142 10 116 1.62e-38 144
Msa0490240 AT5G35550.1 56.731 104 45 0 37 140 14 117 3.14e-38 141
Msa0490240 AT1G79180.1 55.769 104 46 0 37 140 14 117 6.64e-38 141
Msa0490240 AT5G16600.1 56.481 108 47 0 35 142 10 117 7.06e-38 142
Msa0490240 AT5G62320.1 55.752 113 43 1 35 140 11 123 9.30e-38 139
Msa0490240 AT5G60890.1 55.660 106 47 0 37 142 12 117 9.32e-38 140
Msa0490240 AT5G56110.1 56.731 104 45 0 37 140 12 115 9.79e-38 141
Msa0490240 AT4G12350.1 54.717 106 48 0 35 140 10 115 9.85e-38 140
Msa0490240 AT3G30210.1 57.547 106 45 0 38 143 28 133 1.17e-37 140
Msa0490240 AT4G17785.2 54.808 104 47 0 37 140 13 116 1.37e-37 142
Msa0490240 AT4G17785.1 54.808 104 47 0 37 140 13 116 1.76e-37 142
Msa0490240 AT1G09540.1 54.717 106 48 0 37 142 12 117 1.89e-37 142
Msa0490240 AT2G26950.1 47.407 135 70 1 37 170 16 150 2.45e-37 142
Msa0490240 AT1G63910.1 55.660 106 47 0 37 142 12 117 2.78e-37 141
Msa0490240 AT4G22680.1 54.808 104 47 0 37 140 12 115 3.07e-37 139
Msa0490240 AT3G08500.1 51.163 129 61 1 16 142 7 135 3.11e-37 140
Msa0490240 AT3G62610.1 55.660 106 47 0 35 140 10 115 3.61e-37 140
Msa0490240 AT1G16490.1 53.846 104 48 0 37 140 14 117 4.56e-37 138
Msa0490240 AT3G13890.1 53.097 113 44 1 37 140 12 124 5.55e-37 140
Msa0490240 AT3G60460.1 53.271 107 49 1 37 142 11 117 6.00e-37 139
Msa0490240 AT5G52600.1 54.630 108 49 0 33 140 8 115 6.53e-37 135
Msa0490240 AT5G14340.1 55.660 106 47 0 37 142 24 129 7.01e-37 138
Msa0490240 AT1G56160.1 53.846 104 48 0 37 140 14 117 7.39e-37 138
Msa0490240 AT3G12720.1 50.442 113 56 0 28 140 13 125 1.18e-36 138
Msa0490240 AT1G74080.1 57.282 103 44 0 37 139 12 114 1.64e-36 138
Msa0490240 AT2G36890.1 53.913 115 50 2 37 150 12 124 2.36e-36 137
Msa0490240 AT5G65790.1 57.143 105 44 1 37 140 12 116 2.80e-36 139
Msa0490240 AT4G01680.2 52.542 118 44 1 37 142 12 129 3.06e-36 138
Msa0490240 AT5G57620.1 56.190 105 45 1 37 140 12 116 3.68e-36 137
Msa0490240 AT2G36890.2 53.913 115 50 2 37 150 53 165 4.06e-36 137
Msa0490240 AT5G23000.1 54.286 105 47 1 37 140 12 116 4.29e-36 137
Msa0490240 AT3G49690.1 57.143 105 44 1 37 140 12 116 5.81e-36 136
Msa0490240 AT5G59780.3 55.340 103 46 0 38 140 9 111 1.04e-35 133
Msa0490240 AT1G74430.1 54.808 104 47 0 37 140 12 115 1.35e-35 134
Msa0490240 AT3G28470.1 57.576 99 42 0 37 135 12 110 2.20e-35 135
Msa0490240 AT3G46130.1 54.369 103 47 0 38 140 10 112 3.64e-35 132
Msa0490240 AT3G12820.1 53.846 104 48 0 37 140 14 117 1.52e-34 130
Msa0490240 AT1G25340.2 47.200 125 55 2 18 142 5 118 2.32e-34 131
Msa0490240 AT3G06490.1 56.311 103 45 0 37 139 19 121 3.72e-34 132
Msa0490240 AT1G25340.3 47.200 125 55 2 18 142 5 118 4.13e-34 131
Msa0490240 AT1G66370.1 50.476 105 52 0 37 141 8 112 9.12e-34 128
Msa0490240 AT1G18710.1 52.885 104 49 0 37 140 12 115 2.03e-33 128
Msa0490240 AT5G49620.1 53.398 103 48 0 37 139 26 128 6.50e-33 128
Msa0490240 AT1G79180.2 42.336 137 46 1 37 140 14 150 4.01e-32 126
Msa0490240 AT3G53200.1 50.000 108 54 0 36 143 8 115 4.50e-32 124
Msa0490240 AT3G48920.1 51.961 102 49 0 38 139 19 120 1.77e-31 122
Msa0490240 AT1G66380.1 51.429 105 51 0 37 141 8 112 2.41e-31 118
Msa0490240 AT5G52260.1 48.696 115 59 0 38 152 13 127 6.07e-31 121
Msa0490240 AT1G56650.1 50.476 105 52 0 37 141 8 112 2.57e-30 119
Msa0490240 AT5G26660.2 49.123 114 46 3 70 171 14 127 1.29e-29 119
Msa0490240 AT5G49620.2 47.009 117 48 1 37 139 26 142 1.98e-29 118
Msa0490240 AT1G66390.1 50.476 105 52 0 37 141 8 112 2.77e-29 116
Msa0490240 AT4G25560.1 48.544 103 53 0 38 140 11 113 6.23e-29 116
Msa0490240 AT3G27785.1 47.619 105 54 1 37 141 187 290 1.95e-26 112
Msa0490240 AT5G35550.2 61.972 71 27 0 70 140 50 120 2.32e-26 108
Msa0490240 AT3G27810.2 56.944 72 31 0 68 139 2 73 2.38e-26 105
Msa0490240 AT5G58850.1 49.057 106 50 3 37 141 103 205 4.27e-26 111
Msa0490240 AT5G11050.1 42.537 134 63 4 39 171 105 225 7.50e-26 110
Msa0490240 AT4G18770.1 48.113 106 51 3 37 141 215 317 9.30e-26 110
Msa0490240 AT3G55730.1 48.077 104 51 2 39 141 56 157 1.06e-25 109
Msa0490240 AT5G40360.1 42.453 106 60 1 36 141 155 259 1.20e-25 108
Msa0490240 AT3G09230.1 50.000 102 50 1 39 140 55 155 1.36e-25 108
Msa0490240 AT5G02320.1 41.844 141 69 3 37 174 125 255 1.38e-25 110
Msa0490240 AT5G02320.2 41.844 141 69 3 37 174 125 255 1.38e-25 110
Msa0490240 AT5G02320.3 41.844 141 69 3 37 174 65 195 1.96e-25 109
Msa0490240 AT5G14750.3 60.294 68 27 0 73 140 18 85 2.36e-25 102
Msa0490240 AT5G40350.2 57.143 70 30 0 70 139 5 74 2.63e-25 102
Msa0490240 AT2G23290.1 50.000 102 50 1 39 140 13 113 3.58e-25 106
Msa0490240 AT3G12820.2 63.235 68 25 0 73 140 2 69 3.83e-25 103
Msa0490240 AT3G47600.2 58.904 73 30 0 70 142 39 111 9.46e-25 105
Msa0490240 AT5G67300.1 48.039 102 52 1 39 140 6 106 1.27e-24 104
Msa0490240 AT3G46130.3 59.722 72 29 0 69 140 9 80 1.91e-24 102
Msa0490240 AT2G39880.1 45.872 109 56 2 33 140 44 150 2.24e-24 105
Msa0490240 AT1G69560.2 36.869 198 103 7 14 208 102 280 3.29e-24 104
Msa0490240 AT4G37260.1 47.059 102 53 1 39 140 13 113 3.83e-24 103
Msa0490240 AT5G59780.2 59.155 71 29 0 70 140 20 90 4.07e-24 100
Msa0490240 AT1G69560.1 36.869 198 103 7 14 208 86 264 4.14e-24 103
Msa0490240 AT3G46130.4 59.155 71 29 0 70 140 20 90 5.93e-24 100
Msa0490240 AT3G53200.2 56.757 74 32 0 70 143 9 82 6.03e-24 100
Msa0490240 AT3G50060.1 44.037 109 60 1 39 147 6 113 7.80e-24 102
Msa0490240 AT3G09370.2 46.154 104 55 1 37 140 133 235 1.30e-23 104
Msa0490240 AT3G09370.1 46.154 104 55 1 37 140 128 230 1.31e-23 104
Msa0490240 AT3G09370.3 46.154 104 55 1 37 140 141 243 1.48e-23 104
Msa0490240 AT4G32730.5 43.269 104 58 1 37 140 85 187 2.07e-23 105
Msa0490240 AT4G32730.4 43.269 104 58 1 37 140 85 187 2.07e-23 105
Msa0490240 AT4G32730.3 43.269 104 58 1 37 140 85 187 2.07e-23 105
Msa0490240 AT4G32730.2 43.269 104 58 1 37 140 85 187 2.07e-23 105
Msa0490240 AT4G32730.1 43.269 104 58 1 37 140 85 187 2.10e-23 104
Msa0490240 AT1G17950.1 44.828 116 61 2 35 149 1 114 4.07e-23 99.0
Msa0490240 AT5G11510.3 43.269 104 58 1 37 140 79 181 5.55e-23 103
Msa0490240 AT5G11510.1 43.269 104 58 1 37 140 79 181 5.55e-23 103
Msa0490240 AT5G11510.4 43.269 104 58 1 37 140 79 181 5.55e-23 103
Msa0490240 AT5G11510.2 43.269 104 58 1 37 140 79 181 6.40e-23 103
Msa0490240 AT5G11510.5 43.269 104 58 1 37 140 79 181 6.74e-23 103
Msa0490240 AT1G26780.2 45.370 108 56 2 36 142 95 200 8.13e-23 100
Msa0490240 AT1G26780.1 45.370 108 56 2 36 142 95 200 8.56e-23 98.6
Msa0490240 AT5G17800.1 44.860 107 58 1 36 142 90 195 9.03e-23 99.8
Msa0490240 AT4G33450.1 43.519 108 60 1 38 145 18 124 1.70e-22 97.1
Msa0490240 AT1G18960.1 44.118 102 54 2 39 140 10 108 1.78e-21 95.5
Msa0490240 AT1G66380.3 55.556 72 32 0 70 141 8 79 3.95e-21 89.0
Msa0490240 AT2G25230.1 42.308 104 58 2 37 140 24 125 5.11e-21 92.4
Msa0490240 AT1G73410.1 44.954 109 57 2 35 142 2 108 1.41e-20 91.7
Msa0490240 AT4G00540.2 34.146 164 91 4 37 197 101 250 1.74e-20 94.0
Msa0490240 AT1G73410.2 44.954 109 57 2 35 142 2 108 2.26e-20 89.7
Msa0490240 AT4G00540.1 34.146 164 91 4 37 197 99 248 2.87e-20 94.0
Msa0490240 AT3G29020.1 41.121 107 62 1 36 142 62 167 3.26e-20 90.1
Msa0490240 AT3G29020.2 41.121 107 62 1 36 142 64 169 3.36e-20 91.7
Msa0490240 AT1G66380.2 50.000 78 39 0 37 114 8 85 1.69e-19 84.3
Msa0490240 AT1G22640.3 63.158 57 21 0 84 140 2 58 2.48e-19 86.7
Msa0490240 AT2G37630.1 38.835 103 61 1 42 142 7 109 4.49e-19 89.4
Msa0490240 AT5G40430.1 34.307 137 84 4 4 140 22 152 7.28e-19 86.7
Msa0490240 AT3G23250.2 53.030 66 31 0 84 149 2 67 2.09e-17 82.0
Msa0490240 AT1G71030.2 50.769 65 32 0 76 140 5 69 4.89e-17 79.7
Msa0490240 AT1G71030.1 50.769 65 32 0 76 140 19 83 6.16e-17 79.7
Msa0490240 AT5G14750.4 53.448 58 27 0 83 140 1 58 7.21e-17 77.8
Msa0490240 AT5G14750.2 53.448 58 27 0 83 140 1 58 7.21e-17 77.8
Msa0490240 AT1G14350.2 33.663 101 66 1 42 142 28 127 7.79e-15 77.0
Msa0490240 AT1G14350.1 33.663 101 66 1 42 142 28 127 7.79e-15 77.0
Msa0490240 AT5G39700.1 36.000 100 63 1 40 139 57 155 1.26e-13 70.1
Msa0490240 AT2G02820.2 32.673 101 67 1 42 142 33 132 9.65e-13 70.9
Msa0490240 AT2G02820.1 32.673 101 67 1 42 142 33 132 1.55e-12 70.1
Msa0490240 AT2G02820.3 32.673 101 67 1 42 142 33 132 2.91e-12 68.6
Msa0490240 AT5G59780.1 54.348 46 21 0 95 140 1 46 1.13e-11 63.9
Msa0490240 AT3G46130.2 54.348 46 21 0 95 140 1 46 1.77e-11 63.9
Msa0490240 AT4G25560.2 52.174 46 22 0 95 140 2 47 7.20e-11 62.4

Find 172 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGATCCTTTCTTTAAATT+TGG 0.143322 3_4:-11683787 None:intergenic
TTACTATCACTTTCTATTTC+AGG 0.162255 3_4:+11682572 Msa0490240:five_prime_UTR
GAACAATTGTTATTTGAATT+TGG 0.225333 3_4:-11686303 None:intergenic
GATAAGACTGCACAATCTTT+TGG 0.229185 3_4:+11685973 Msa0490240:CDS
CAGCCACCAAAGCCGGTTTC+TGG 0.231887 3_4:-11686132 None:intergenic
AGTGAGAGAAAGAGAGAAAA+TGG 0.257634 3_4:-11682075 None:intergenic
ATCTGCAGAAGACGCTATTT+TGG 0.270851 3_4:+11683654 Msa0490240:CDS
TGCCCATCTGTTTCCCATTT+CGG 0.272213 3_4:-11683848 None:intergenic
AGGAGAGGAGGTGGTGGAAA+TGG 0.273865 3_4:-11681992 None:intergenic
CAAAGCCGGTTTCTGGATAT+TGG 0.282709 3_4:-11686125 None:intergenic
CAGAAACCGGCTTTGGTGGC+TGG 0.293385 3_4:+11686133 Msa0490240:CDS
TAAACAATCTTGAAACTCTT+AGG 0.294914 3_4:+11687201 Msa0490240:three_prime_UTR
TGACAATTTGAAGGAAAATC+AGG 0.295404 3_4:+11685768 Msa0490240:CDS
TTGGATTGCAAGCTGCTAAA+TGG 0.296673 3_4:+11687281 Msa0490240:three_prime_UTR
TAACAGCATGGCACTCATTC+AGG 0.301452 3_4:-11686452 None:intergenic
TCGAGCGTGCCACTATTATT+TGG 0.311579 3_4:-11686252 None:intergenic
TGATCCTGAACATGGTAAAA+TGG 0.311792 3_4:-11685943 None:intergenic
GAAACCGGCTTTGGTGGCTG+GGG 0.324398 3_4:+11686135 Msa0490240:CDS
GGAATTTCAGTTAACACCTT+TGG 0.328652 3_4:+11682537 Msa0490240:five_prime_UTR
AACGCTGTTCAGAAGCATTC+AGG 0.331650 3_4:+11683712 Msa0490240:CDS
ACCGGCTTTGGTGGCTGGGG+GGG 0.336926 3_4:+11686138 Msa0490240:CDS
CCACATGCTTATAATCTGTT+AGG 0.339714 3_4:-11687012 None:intergenic
CAAGTGGAACGAACAAGAAT+TGG 0.357296 3_4:+11685914 Msa0490240:CDS
GGTAATGGAGGAAGTGTTAA+TGG 0.364177 3_4:+11683601 Msa0490240:CDS
CCCGATGACGCCTCTTGGTC+CGG 0.365400 3_4:-11685597 None:intergenic
TGACATGGCACTTGAAACTT+TGG 0.366762 3_4:+11687262 Msa0490240:three_prime_UTR
AGAAACCGGCTTTGGTGGCT+GGG 0.370969 3_4:+11686134 Msa0490240:CDS
TGTCTTCTTCTGATAAATAA+TGG 0.371278 3_4:-11686277 None:intergenic
ATTGTTCGCAAACGAACTTC+TGG 0.371602 3_4:-11685640 None:intergenic
TGCAATATTTGACAATTTGA+AGG 0.373979 3_4:+11685759 Msa0490240:CDS
AAACCGGCTTTGGTGGCTGG+GGG 0.376163 3_4:+11686136 Msa0490240:CDS
CACTGTTTGGGGTAGAAACT+TGG 0.377211 3_4:-11686877 None:intergenic
TGCTCAACTCCATTCCGAAA+TGG 0.378343 3_4:+11683834 Msa0490240:CDS
ACACCTGCTCAGAACTTTAG+TGG 0.382430 3_4:+11686504 Msa0490240:CDS
TTGCATTCTCCTCTTGATCC+TGG 0.392166 3_4:+11685997 Msa0490240:CDS
GAAGAGAGGAGAGGAGGTGG+TGG 0.392575 3_4:-11681998 None:intergenic
ATAATGAAATAAAGAACTAT+TGG 0.392597 3_4:+11685569 Msa0490240:CDS
TTCTCGGGCAAAATTGTAAT+AGG 0.403233 3_4:-11685799 None:intergenic
TTGGAAGAGAGGAGAGGAGG+TGG 0.407222 3_4:-11682001 None:intergenic
GGGGTAGAAACTTGGTCAAC+AGG 0.408150 3_4:-11686869 None:intergenic
ACTGACCCTGCATCTCCCTT+TGG 0.411283 3_4:+11686417 Msa0490240:CDS
TTTATCCCATGAGTTTGTAT+TGG 0.414468 3_4:-11686478 None:intergenic
AAAGAGAGAAAATGGTACTT+AGG 0.421471 3_4:-11682067 None:intergenic
GAAAGAGAAAGAGAAAATGA+AGG 0.422020 3_4:-11682036 None:intergenic
TGTTGTGCTCTTTCTTCGCT+CGG 0.424195 3_4:+11682154 Msa0490240:five_prime_UTR
GCTCAACTCCATTCCGAAAT+GGG 0.424645 3_4:+11683835 Msa0490240:CDS
ATGCTATTAGCAGAAATATC+AGG 0.424760 3_4:-11685823 None:intergenic
GAACTCTCACCTCCGTCAAC+AGG 0.428520 3_4:-11686357 None:intergenic
AGCAGAAATATCAGGATTCT+CGG 0.431318 3_4:-11685815 None:intergenic
CCAAGAAAAGACATTGTTGA+TGG 0.435314 3_4:-11685889 None:intergenic
AACCGGCTTTGGTGGCTGGG+GGG 0.436055 3_4:+11686137 Msa0490240:CDS
AAGAATAACATGAATGCATA+AGG 0.437700 3_4:-11687143 None:intergenic
TTAAGGCCAAATTTAAAGAA+AGG 0.440027 3_4:+11683781 Msa0490240:CDS
CGGTCGAATGGTGAGGGTAA+TGG 0.440795 3_4:+11683586 Msa0490240:CDS
TATCCAGAAACCGGCTTTGG+TGG 0.441737 3_4:+11686129 Msa0490240:CDS
GGAAGCATGGAGAAGGCAAC+TGG 0.444924 3_4:+11683689 Msa0490240:CDS
CCACATGGTGCGCAAGAGTC+CGG 0.446215 3_4:+11686219 Msa0490240:CDS
CAATATCCAGAAACCGGCTT+TGG 0.446614 3_4:+11686126 Msa0490240:CDS
TTCAACTCCTTCACAAACTT+CGG 0.452432 3_4:+11682184 Msa0490240:five_prime_UTR
CGAAGAAAGAGCACAACATT+GGG 0.455528 3_4:-11682149 None:intergenic
ATTATTTGGTGAAGAACAAC+CGG 0.458566 3_4:-11686238 None:intergenic
TGTTCTTCACCAAATAATAG+TGG 0.463312 3_4:+11686243 Msa0490240:CDS
GTTGCACCAAAGGGAGATGC+AGG 0.466644 3_4:-11686423 None:intergenic
GCCAGCCCGATGACGCCTCT+TGG 0.468187 3_4:-11685602 None:intergenic
CCCGGACCAAGAGGCGTCAT+CGG 0.469874 3_4:+11685596 Msa0490240:CDS
CCGGACCAAGAGGCGTCATC+GGG 0.470564 3_4:+11685597 Msa0490240:CDS
GATGGCACAGGATTGCAATA+TGG 0.472691 3_4:-11685871 None:intergenic
CATTGATTCCACCAGTGCCT+TGG 0.480224 3_4:-11685681 None:intergenic
GACATCCAAGGCTGTGAAGT+TGG 0.483063 3_4:+11686089 Msa0490240:CDS
ACCAAGAGGCGTCATCGGGC+TGG 0.485549 3_4:+11685601 Msa0490240:CDS
GATTGGCATGAGCAGTGCTA+TGG 0.486316 3_4:+11686956 Msa0490240:CDS
GGGACTTATTCTTCAAGTAC+AGG 0.486682 3_4:+11687040 Msa0490240:CDS
ACAGACTCATTCAGTGGAGA+TGG 0.487994 3_4:-11686171 None:intergenic
GGTGGAGTTGTTCTGAAGAA+AGG 0.488612 3_4:+11683622 Msa0490240:CDS
TGAGATGGGCAAATCACTTA+AGG 0.491691 3_4:+11683764 Msa0490240:CDS
TGAACATGAATGAGACAGAA+TGG 0.495262 3_4:+11686385 Msa0490240:CDS
GTTTGTGAAGGAGTTGAAGA+AGG 0.496505 3_4:-11682179 None:intergenic
TCACTCCAATATCCAGAAAC+CGG 0.496933 3_4:+11686120 Msa0490240:CDS
AAAGACATTGTTGATGGCAC+AGG 0.499006 3_4:-11685883 None:intergenic
GACAATTTGAAGGAAAATCA+GGG 0.502694 3_4:+11685769 Msa0490240:CDS
CAGACTCATTCAGTGGAGAT+GGG 0.504118 3_4:-11686170 None:intergenic
AGAGGAATTGCCATTTGATA+CGG 0.505395 3_4:-11686055 None:intergenic
TACCGCCATTCCGTATCAAA+TGG 0.505543 3_4:+11686045 Msa0490240:CDS
CAGGATTGAGGTTGCACCAA+AGG 0.505711 3_4:-11686433 None:intergenic
AAAGAGAAAGAGAAAATGAA+GGG 0.510193 3_4:-11682035 None:intergenic
TCTGAAGCTAACATGACATC+TGG 0.511041 3_4:-11686935 None:intergenic
GTTCGTTTGCGAACAATGAA+AGG 0.514427 3_4:+11685646 Msa0490240:CDS
ATCTGTTTCCCATTTCGGAA+TGG 0.514519 3_4:-11683843 None:intergenic
GAGTTATGTGAGGGGAGACC+AGG 0.515161 3_4:-11686015 None:intergenic
GCGAAGAAAGAGCACAACAT+TGG 0.515978 3_4:-11682150 None:intergenic
AGTAAACATGGCCAAGGCAC+TGG 0.516230 3_4:+11685670 Msa0490240:CDS
GAGCTCCAACTTCACAGCCT+TGG 0.521427 3_4:-11686094 None:intergenic
TTCGTTTGCGAACAATGAAA+GGG 0.522274 3_4:+11685647 Msa0490240:CDS
CCGATGACGCCTCTTGGTCC+GGG 0.523404 3_4:-11685596 None:intergenic
GTGGAGTTGTTCTGAAGAAA+GGG 0.523448 3_4:+11683623 Msa0490240:CDS
GGGAAACAGATGGGCACGTA+TGG 0.525456 3_4:+11683855 Msa0490240:CDS
AGGATTGAGGTTGCACCAAA+GGG 0.525462 3_4:-11686432 None:intergenic
AACTTCACAGCCTTGGATGT+CGG 0.525914 3_4:-11686087 None:intergenic
ATGTCATGTTAGCTTCAGAT+TGG 0.528468 3_4:+11686939 Msa0490240:CDS
ATGGCACTCATTCAGGATTG+AGG 0.529262 3_4:-11686445 None:intergenic
GGAATCAATGATGGTGATAG+AGG 0.529519 3_4:+11685694 Msa0490240:CDS
TTAACACCAATACAAACTCA+TGG 0.531847 3_4:+11686472 Msa0490240:CDS
GTTGACTACGTCAGGAAGCA+TGG 0.533184 3_4:+11683676 Msa0490240:CDS
GAATTGGAAGAGAGGAGAGG+AGG 0.538300 3_4:-11682004 None:intergenic
AGGAGGTGGTGGAAATGGAA+TGG 0.538444 3_4:-11681987 None:intergenic
GCAGAAATATCAGGATTCTC+GGG 0.538825 3_4:-11685814 None:intergenic
ATTCCGAAATGGGAAACAGA+TGG 0.547886 3_4:+11683845 Msa0490240:CDS
ACAGATTATAAGCATGTGGC+TGG 0.548005 3_4:+11687016 Msa0490240:CDS
ATTGGCATGAGCAGTGCTAT+GGG 0.550093 3_4:+11686957 Msa0490240:CDS
TCTTGCGCACCATGTGGCAG+AGG 0.550222 3_4:-11686213 None:intergenic
TTCCGAAATGGGAAACAGAT+GGG 0.553867 3_4:+11683846 Msa0490240:CDS
GTTTCTGGATATTGGAGTGA+AGG 0.556016 3_4:-11686117 None:intergenic
TCTACTACAACTCCTGTTGA+CGG 0.564833 3_4:+11686345 Msa0490240:CDS
GAATAATTTGTATAATGACA+TGG 0.566040 3_4:+11687247 Msa0490240:three_prime_UTR
ATTATAAGCATGTGGCTGGT+GGG 0.566498 3_4:+11687020 Msa0490240:CDS
TGTTAGGTTGTCACTAGCCT+CGG 0.567026 3_4:-11686996 None:intergenic
GAACATGAATGAGACAGAAT+GGG 0.567198 3_4:+11686386 Msa0490240:CDS
CATTCAGGCTTGTCTCGTTG+TGG 0.568593 3_4:+11683727 Msa0490240:CDS
TTGTTCTGAAGAAAGGGCCG+TGG 0.569423 3_4:+11683629 Msa0490240:CDS
TGTTCAACATAGACATAGAT+CGG 0.574967 3_4:-11686904 None:intergenic
GATTATAAGCATGTGGCTGG+TGG 0.575177 3_4:+11687019 Msa0490240:CDS
AATTGCCATTTGATACGGAA+TGG 0.575303 3_4:-11686050 None:intergenic
AGTGATTTGCCCATCTCAGA+CGG 0.575929 3_4:-11683759 None:intergenic
CGAACTTCTGGAGGATAGAG+TGG 0.579102 3_4:-11685628 None:intergenic
TACGTCAGGAAGCATGGAGA+AGG 0.579724 3_4:+11683682 Msa0490240:CDS
AGACTCATTCAGTGGAGATG+GGG 0.580513 3_4:-11686169 None:intergenic
CAGAACTATGATCCTGAACA+TGG 0.580858 3_4:-11685951 None:intergenic
TACTTCTAAGCCGACATCCA+AGG 0.581030 3_4:+11686077 Msa0490240:CDS
AGGATCATTTACTGCTGATG+AGG 0.581122 3_4:+11683801 Msa0490240:CDS
GAGGGGAGACCAGGATCAAG+AGG 0.581130 3_4:-11686006 None:intergenic
TTTCTGGATATTGGAGTGAA+GGG 0.581747 3_4:-11686116 None:intergenic
TGTCTATGTTGAACATCACT+TGG 0.584021 3_4:+11686912 Msa0490240:CDS
CAAACACGGTCACGGTCGAA+TGG 0.589790 3_4:+11683574 Msa0490240:CDS
TAAAGAACTATTGGAATACC+CGG 0.592308 3_4:+11685578 Msa0490240:CDS
TAACCACTAAAGTTCTGAGC+AGG 0.593277 3_4:-11686507 None:intergenic
TTGTATTGGTGTTAACAGCA+TGG 0.595840 3_4:-11686464 None:intergenic
GGACTTATTCTTCAAGTACA+GGG 0.596006 3_4:+11687041 Msa0490240:CDS
AAATAATAGTGGCACGCTCG+AGG 0.597636 3_4:+11686254 Msa0490240:CDS
GTAATGAATTTAAGATCCAA+AGG 0.604364 3_4:-11682553 None:intergenic
AATCAGTCTCCTCTGCCACA+TGG 0.606298 3_4:+11686204 Msa0490240:CDS
TAACACCAATACAAACTCAT+GGG 0.608765 3_4:+11686473 Msa0490240:CDS
ACGGTCACGGTCGAATGGTG+AGG 0.609707 3_4:+11683579 Msa0490240:CDS
GGATGTCGGCTTAGAAGTAG+AGG 0.610617 3_4:-11686073 None:intergenic
AAAGGGAGTAAACATGGCCA+AGG 0.613145 3_4:+11685664 Msa0490240:CDS
GCGTCTTCTGCAGATGTCCA+CGG 0.613237 3_4:-11683646 None:intergenic
ATTTCATTATCTGTACGACC+AGG 0.614489 3_4:-11685556 None:intergenic
AAACATGGCCAAGGCACTGG+TGG 0.614540 3_4:+11685673 Msa0490240:CDS
GGCACTGGTGGAATCAATGA+TGG 0.615452 3_4:+11685685 Msa0490240:CDS
GACTCATTCAGTGGAGATGG+GGG 0.616024 3_4:-11686168 None:intergenic
TAATACATCGAGTTATGTGA+GGG 0.620385 3_4:-11686024 None:intergenic
ACATCAACAGACTCATTCAG+TGG 0.622129 3_4:-11686177 None:intergenic
GCAACGATCAAACACGGTCA+CGG 0.624326 3_4:+11683566 Msa0490240:CDS
AATGGAGGAAGTGTTAATGG+TGG 0.626822 3_4:+11683604 Msa0490240:CDS
CGGTCACGGTCGAATGGTGA+GGG 0.628700 3_4:+11683580 Msa0490240:CDS
GGCACAGGATTGCAATATGG+AGG 0.630900 3_4:-11685868 None:intergenic
GAATCAATGATGGTGATAGA+GGG 0.631416 3_4:+11685695 Msa0490240:CDS
ACAATGAAAGGGAGTAAACA+TGG 0.633095 3_4:+11685658 Msa0490240:CDS
TGCTCTGCAACGATCAAACA+CGG 0.633385 3_4:+11683560 Msa0490240:CDS
TCGAATGGTGAGGGTAATGG+AGG 0.642357 3_4:+11683589 Msa0490240:CDS
GTAATACATCGAGTTATGTG+AGG 0.644113 3_4:-11686025 None:intergenic
CCTAACAGATTATAAGCATG+TGG 0.645400 3_4:+11687012 Msa0490240:CDS
ATCCAGACCGAAGTTTGTGA+AGG 0.648530 3_4:-11682191 None:intergenic
GACTTATTCTTCAAGTACAG+GGG 0.651682 3_4:+11687042 Msa0490240:CDS
GTTCGCAAACGAACTTCTGG+AGG 0.658612 3_4:-11685637 None:intergenic
TGCCATTTGATACGGAATGG+CGG 0.662997 3_4:-11686047 None:intergenic
ATTGGAATACCCGGACCAAG+AGG 0.666025 3_4:+11685587 Msa0490240:CDS
ACTTATTCTTCAAGTACAGG+GGG 0.671833 3_4:+11687043 Msa0490240:CDS
CCGGACTCTTGCGCACCATG+TGG 0.683210 3_4:-11686219 None:intergenic
TTGCACCAAAGGGAGATGCA+GGG 0.696277 3_4:-11686422 None:intergenic
ACTACAACTCCTGTTGACGG+AGG 0.707521 3_4:+11686348 Msa0490240:CDS
AATACATCGAGTTATGTGAG+GGG 0.751807 3_4:-11686023 None:intergenic
GCACGAGAAGAACATGACCG+AGG 0.769618 3_4:+11686979 Msa0490240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTAATTTATTTTTT+TGG + chr3_4:11682301-11682320 Msa0490240:intron 0.0%
!!! TTAATTTAATTTATTTTTTT+GGG + chr3_4:11682302-11682321 Msa0490240:intron 0.0%
!! TTTAATGTTAAACAATTAAA+TGG + chr3_4:11682348-11682367 Msa0490240:intron 10.0%
!! TTAATGTTAAACAATTAAAT+GGG + chr3_4:11682349-11682368 Msa0490240:intron 10.0%
!! AATAAATAAATTACTATCAA+AGG - chr3_4:11682637-11682656 None:intergenic 10.0%
!!! TTTTTAAGTAATTTAATTTG+TGG + chr3_4:11683465-11683484 Msa0490240:intron 10.0%
!!! TATTTTATTTCATATAGATA+GGG - chr3_4:11684063-11684082 None:intergenic 10.0%
!!! TAATTAAACTCTTATTTAAA+TGG - chr3_4:11684148-11684167 None:intergenic 10.0%
!! ATAATTATGTTAATACATTT+CGG - chr3_4:11684560-11684579 None:intergenic 10.0%
!! ATCAATTATATCAATAAAAA+TGG + chr3_4:11685258-11685277 Msa0490240:intron 10.0%
!! TATCACAAAATTAATAACAT+GGG - chr3_4:11682732-11682751 None:intergenic 15.0%
!! TTATCACAAAATTAATAACA+TGG - chr3_4:11682733-11682752 None:intergenic 15.0%
!! AAATAATAACTATCAAAGAA+AGG - chr3_4:11682809-11682828 None:intergenic 15.0%
!!! GAGTTTTTATGAATTAAATT+AGG + chr3_4:11682923-11682942 Msa0490240:intron 15.0%
!!! TTTTTATGAATTAAATTAGG+TGG + chr3_4:11682926-11682945 Msa0490240:intron 15.0%
!!! TTTCATTTTTTTGTTTCTTT+TGG + chr3_4:11683932-11683951 Msa0490240:intron 15.0%
!!! CTATTTTATTTCATATAGAT+AGG - chr3_4:11684064-11684083 None:intergenic 15.0%
!! TAATATATGTATTTGAACAT+TGG + chr3_4:11684811-11684830 Msa0490240:intron 15.0%
!!! AAGAAAGAAAAATTATCTTT+TGG - chr3_4:11684979-11684998 None:intergenic 15.0%
!!! TAAAAAATAATCATGGATTA+AGG - chr3_4:11685510-11685529 None:intergenic 15.0%
!! TCAATCATAAAAAATAATCA+TGG - chr3_4:11685517-11685536 None:intergenic 15.0%
!! ATAATGAAATAAAGAACTAT+TGG + chr3_4:11685569-11685588 Msa0490240:CDS 15.0%
!! AAGTTTAACTATTAGTATTT+CGG - chr3_4:11686553-11686572 None:intergenic 15.0%
!! AAATAAATACTTAAAATCAG+TGG + chr3_4:11686729-11686748 Msa0490240:intron 15.0%
!! GAAATAGAGAAAAAACATAT+TGG - chr3_4:11682242-11682261 None:intergenic 20.0%
!!! AGCTAATTTATTTTTGATGT+AGG + chr3_4:11682423-11682442 Msa0490240:intron 20.0%
!!! TAGATAGATTGTTCTTTTAT+TGG + chr3_4:11682515-11682534 Msa0490240:five_prime_UTR 20.0%
!!! AGATAGATTGTTCTTTTATT+GGG + chr3_4:11682516-11682535 Msa0490240:five_prime_UTR 20.0%
!!! ATTTATTTTACTTCCTGATT+TGG + chr3_4:11683077-11683096 Msa0490240:intron 20.0%
!!! ACATTAATTGCTTTTTATGA+AGG + chr3_4:11683421-11683440 Msa0490240:intron 20.0%
!!! CATTAATTGCTTTTTATGAA+GGG + chr3_4:11683422-11683441 Msa0490240:intron 20.0%
!!! AAGGGTTTCATTTTATTTTT+TGG + chr3_4:11683440-11683459 Msa0490240:intron 20.0%
!! AATGATCCTTTCTTTAAATT+TGG - chr3_4:11683790-11683809 None:intergenic 20.0%
!!! TGTAATTTTTTTTACATCGA+CGG - chr3_4:11684178-11684197 None:intergenic 20.0%
!!! AAACATTTTTAATGATCTGA+CGG + chr3_4:11684258-11684277 Msa0490240:intron 20.0%
!! TCAAGAAAGAAAGAAAAAAA+TGG - chr3_4:11684841-11684860 None:intergenic 20.0%
!! ATATGATATGATATGATCTA+AGG - chr3_4:11685019-11685038 None:intergenic 20.0%
!! CTATTCCAAAATTTATAAGT+TGG + chr3_4:11685152-11685171 Msa0490240:intron 20.0%
!!! CTTTTCCAACTTATAAATTT+TGG - chr3_4:11685160-11685179 None:intergenic 20.0%
!!! GAACAATTGTTATTTGAATT+TGG - chr3_4:11686306-11686325 None:intergenic 20.0%
!! AACTAAAAACAGAAACTAAA+GGG - chr3_4:11686764-11686783 None:intergenic 20.0%
!! AAACTAAAAACAGAAACTAA+AGG - chr3_4:11686765-11686784 None:intergenic 20.0%
!!! GAATAATTTGTATAATGACA+TGG + chr3_4:11687247-11687266 Msa0490240:three_prime_UTR 20.0%
! AAAGAGAAAGAGAAAATGAA+GGG - chr3_4:11682038-11682057 None:intergenic 25.0%
! ATTTCATTCTTGCACTTAAA+TGG + chr3_4:11682257-11682276 Msa0490240:intron 25.0%
! TTTCATTCTTGCACTTAAAT+GGG + chr3_4:11682258-11682277 Msa0490240:intron 25.0%
!! ATTTTTGATGTAGGAATTTC+AGG + chr3_4:11682432-11682451 Msa0490240:intron 25.0%
!! TTTTTGATGTAGGAATTTCA+GGG + chr3_4:11682433-11682452 Msa0490240:intron 25.0%
!! GTAATGAATTTAAGATCCAA+AGG - chr3_4:11682556-11682575 None:intergenic 25.0%
! TTACTATCACTTTCTATTTC+AGG + chr3_4:11682572-11682591 Msa0490240:five_prime_UTR 25.0%
!! AATACTTGTTTAAAGCATCT+TGG - chr3_4:11682763-11682782 None:intergenic 25.0%
! ATTATTTATACATGTTGAGC+TGG + chr3_4:11682829-11682848 Msa0490240:intron 25.0%
! TTATGAATTAAATTAGGTGG+AGG + chr3_4:11682929-11682948 Msa0490240:intron 25.0%
! AAACTGCAATAAATCTTAGT+TGG + chr3_4:11683123-11683142 Msa0490240:intron 25.0%
! CAAAACTAAGATCGAAATAA+TGG + chr3_4:11683383-11683402 Msa0490240:intron 25.0%
! AATAATGGCAGAGTAAATTT+AGG + chr3_4:11683398-11683417 Msa0490240:intron 25.0%
! TTAAGGCCAAATTTAAAGAA+AGG + chr3_4:11683781-11683800 Msa0490240:CDS 25.0%
! GACAAATTAAACAGAAAACA+GGG - chr3_4:11684041-11684060 None:intergenic 25.0%
!!! TACTTCTAAAGTTACACATA+TGG - chr3_4:11684222-11684241 None:intergenic 25.0%
!! TGTAACTTTAGAAGTAGTTA+AGG + chr3_4:11684226-11684245 Msa0490240:intron 25.0%
! AAATCTACAAAGATGTTACA+AGG - chr3_4:11684408-11684427 None:intergenic 25.0%
! TACTGCAATTACAAAACATT+GGG - chr3_4:11684917-11684936 None:intergenic 25.0%
! TTACTGCAATTACAAAACAT+TGG - chr3_4:11684918-11684937 None:intergenic 25.0%
! ATGGAATTTAGACAGTAATA+GGG - chr3_4:11685124-11685143 None:intergenic 25.0%
! AATGGAATTTAGACAGTAAT+AGG - chr3_4:11685125-11685144 None:intergenic 25.0%
! ATTACTGTCTAAATTCCATT+AGG + chr3_4:11685125-11685144 Msa0490240:intron 25.0%
! TGGATTAAGGAATTAATATG+TGG - chr3_4:11685497-11685516 None:intergenic 25.0%
! TGCAATATTTGACAATTTGA+AGG + chr3_4:11685759-11685778 Msa0490240:CDS 25.0%
! TGTCTTCTTCTGATAAATAA+TGG - chr3_4:11686280-11686299 None:intergenic 25.0%
! ACTAAAAACAGAAACTAAAG+GGG - chr3_4:11686763-11686782 None:intergenic 25.0%
! AAGAATAACATGAATGCATA+AGG - chr3_4:11687146-11687165 None:intergenic 25.0%
! TAAACAATCTTGAAACTCTT+AGG + chr3_4:11687201-11687220 Msa0490240:three_prime_UTR 25.0%
GAAAGAGAAAGAGAAAATGA+AGG - chr3_4:11682039-11682058 None:intergenic 30.0%
AAAGAGAGAAAATGGTACTT+AGG - chr3_4:11682070-11682089 None:intergenic 30.0%
CATATTGGATGAAACGAAAA+TGG - chr3_4:11682227-11682246 None:intergenic 30.0%
! ACTTGTTGAACTTTGAACAT+AGG + chr3_4:11682660-11682679 Msa0490240:intron 30.0%
AGTATTAGGATGTGTGTATT+GGG + chr3_4:11683029-11683048 Msa0490240:intron 30.0%
!!! TTTTACTTCCTGATTTGGTA+AGG + chr3_4:11683082-11683101 Msa0490240:intron 30.0%
TAATTATGCCTTACCAAATC+AGG - chr3_4:11683093-11683112 None:intergenic 30.0%
!! CTTAGTTGGTTTCATTTTAG+TGG + chr3_4:11683137-11683156 Msa0490240:intron 30.0%
TTGATGAAATCCTGTAAATC+AGG - chr3_4:11683170-11683189 None:intergenic 30.0%
! ATGAATATGCTATTTGCCAT+AGG + chr3_4:11683969-11683988 Msa0490240:intron 30.0%
GGACAAATTAAACAGAAAAC+AGG - chr3_4:11684042-11684061 None:intergenic 30.0%
TGTAGATAAATGAATGAAGC+TGG + chr3_4:11684122-11684141 Msa0490240:intron 30.0%
TATGGTTTCATCTTAATAGC+TGG + chr3_4:11684323-11684342 Msa0490240:intron 30.0%
! TTGGAAACCTCCTTTTTATT+AGG - chr3_4:11684635-11684654 None:intergenic 30.0%
TCACATCATTCTTGAATTTG+TGG + chr3_4:11684665-11684684 Msa0490240:intron 30.0%
! ATCTTTTGGACTGAATGAAA+AGG - chr3_4:11684965-11684984 None:intergenic 30.0%
! ATAAGTTGGAAAAGCCTAAA+TGG + chr3_4:11685166-11685185 Msa0490240:intron 30.0%
TTTGAAAAACCAAAATGTCC+AGG - chr3_4:11685409-11685428 None:intergenic 30.0%
TAAAGAACTATTGGAATACC+CGG + chr3_4:11685578-11685597 Msa0490240:CDS 30.0%
!!! TGCATCTCATAGTTGTTTTT+CGG - chr3_4:11685736-11685755 None:intergenic 30.0%
TGACAATTTGAAGGAAAATC+AGG + chr3_4:11685768-11685787 Msa0490240:CDS 30.0%
GACAATTTGAAGGAAAATCA+GGG + chr3_4:11685769-11685788 Msa0490240:CDS 30.0%
ATGCTATTAGCAGAAATATC+AGG - chr3_4:11685826-11685845 None:intergenic 30.0%
! TTATCCATTTTACCATGTTC+AGG + chr3_4:11685939-11685958 Msa0490240:CDS 30.0%
TAATACATCGAGTTATGTGA+GGG - chr3_4:11686027-11686046 None:intergenic 30.0%
! ATTATTTGGTGAAGAACAAC+CGG - chr3_4:11686241-11686260 None:intergenic 30.0%
TGTTCTTCACCAAATAATAG+TGG + chr3_4:11686243-11686262 Msa0490240:CDS 30.0%
TTAACACCAATACAAACTCA+TGG + chr3_4:11686472-11686491 Msa0490240:CDS 30.0%
TAACACCAATACAAACTCAT+GGG + chr3_4:11686473-11686492 Msa0490240:CDS 30.0%
TTTATCCCATGAGTTTGTAT+TGG - chr3_4:11686481-11686500 None:intergenic 30.0%
TTTCGGTATACTGCATTAAA+AGG - chr3_4:11686536-11686555 None:intergenic 30.0%
TATATTTGTGAAGTCTTGCA+TGG - chr3_4:11686623-11686642 None:intergenic 30.0%
CTAAAAACAGAAACTAAAGG+GGG - chr3_4:11686762-11686781 None:intergenic 30.0%
! CTAACATCAAAACTTTTGCA+AGG - chr3_4:11686817-11686836 None:intergenic 30.0%
TGTTCAACATAGACATAGAT+CGG - chr3_4:11686907-11686926 None:intergenic 30.0%
!!! TTAGGATAATGTGCTTTTTC+AGG + chr3_4:11687219-11687238 Msa0490240:three_prime_UTR 30.0%
AAGAAAGAGAATTGGAAGAG+AGG - chr3_4:11682015-11682034 None:intergenic 35.0%
ATGAAGGGAAGAAAGAGAAT+TGG - chr3_4:11682023-11682042 None:intergenic 35.0%
AGTGAGAGAAAGAGAGAAAA+TGG - chr3_4:11682078-11682097 None:intergenic 35.0%
TTCAACTCCTTCACAAACTT+CGG + chr3_4:11682184-11682203 Msa0490240:five_prime_UTR 35.0%
! GAAACGAAAATGGTGGAAAA+TGG - chr3_4:11682217-11682236 None:intergenic 35.0%
ATTGGATGAAACGAAAATGG+TGG - chr3_4:11682224-11682243 None:intergenic 35.0%
GGAATTTCAGTTAACACCTT+TGG + chr3_4:11682537-11682556 Msa0490240:five_prime_UTR 35.0%
ATGTTGTGTAAGCCAGTATT+AGG + chr3_4:11683015-11683034 Msa0490240:intron 35.0%
CAATACACACATCCTAATAC+TGG - chr3_4:11683030-11683049 None:intergenic 35.0%
CAGTATTAGGATGTGTGTAT+TGG + chr3_4:11683028-11683047 Msa0490240:intron 35.0%
ACATAACCCTTTCATCGTAA+AGG + chr3_4:11683243-11683262 Msa0490240:intron 35.0%
ATCCATCCTTTACGATGAAA+GGG - chr3_4:11683252-11683271 None:intergenic 35.0%
AATCCATCCTTTACGATGAA+AGG - chr3_4:11683253-11683272 None:intergenic 35.0%
!!! TTTCGATCTTAGTTTTGCGT+GGG - chr3_4:11683380-11683399 None:intergenic 35.0%
!!! ATTTCGATCTTAGTTTTGCG+TGG - chr3_4:11683381-11683400 None:intergenic 35.0%
AAACACGAAAACTAGATGCA+AGG - chr3_4:11683915-11683934 None:intergenic 35.0%
!!! TTTTTTACATCGACGGTGTA+TGG - chr3_4:11684171-11684190 None:intergenic 35.0%
ACTGTCGAAGCCTAATAAAA+AGG + chr3_4:11684622-11684641 Msa0490240:intron 35.0%
GATATACACAGTTTGTCTGT+TGG - chr3_4:11684769-11684788 None:intergenic 35.0%
AAAACATTGGGTGATATGCA+AGG - chr3_4:11684905-11684924 None:intergenic 35.0%
AAAAGGTGAATGAGTTTAGC+AGG - chr3_4:11684948-11684967 None:intergenic 35.0%
!! TTTTAAGGACATGCTACTGT+CGG + chr3_4:11685054-11685073 Msa0490240:intron 35.0%
!!! TTTTGGAATAGAGCTCCTAA+TGG - chr3_4:11685143-11685162 None:intergenic 35.0%
TTGGAAAAGCCTAAATGGTA+AGG + chr3_4:11685171-11685190 Msa0490240:intron 35.0%
TGGAAAAGCCTAAATGGTAA+GGG + chr3_4:11685172-11685191 Msa0490240:intron 35.0%
CTTAACAACCCTTACCATTT+AGG - chr3_4:11685183-11685202 None:intergenic 35.0%
! GTGAGTTGAGTGAAAATATG+AGG + chr3_4:11685229-11685248 Msa0490240:intron 35.0%
ATGGTTGTCTTCTCGAAAAT+AGG + chr3_4:11685277-11685296 Msa0490240:intron 35.0%
GAGCTAAATCTGTGTGAAAA+AGG + chr3_4:11685322-11685341 Msa0490240:intron 35.0%
CTAAATCTGTGTGAAAAAGG+AGG + chr3_4:11685325-11685344 Msa0490240:intron 35.0%
AATTGTGTCCTATATACTCC+TGG + chr3_4:11685388-11685407 Msa0490240:intron 35.0%
! CAAAATGTCCAGGAGTATAT+AGG - chr3_4:11685399-11685418 None:intergenic 35.0%
! CTATATACTCCTGGACATTT+TGG + chr3_4:11685397-11685416 Msa0490240:intron 35.0%
TAAAGAACTATCCTCCATCA+AGG + chr3_4:11685429-11685448 Msa0490240:intron 35.0%
AAAGAACTATCCTCCATCAA+GGG + chr3_4:11685430-11685449 Msa0490240:intron 35.0%
!! TTCTTTTGCTTTTAGTTGCC+TGG + chr3_4:11685538-11685557 Msa0490240:intron 35.0%
ATTTCATTATCTGTACGACC+AGG - chr3_4:11685559-11685578 None:intergenic 35.0%
TTCGTTTGCGAACAATGAAA+GGG + chr3_4:11685647-11685666 Msa0490240:CDS 35.0%
ACAATGAAAGGGAGTAAACA+TGG + chr3_4:11685658-11685677 Msa0490240:CDS 35.0%
! GAATCAATGATGGTGATAGA+GGG + chr3_4:11685695-11685714 Msa0490240:CDS 35.0%
TTCTCGGGCAAAATTGTAAT+AGG - chr3_4:11685802-11685821 None:intergenic 35.0%
AGCAGAAATATCAGGATTCT+CGG - chr3_4:11685818-11685837 None:intergenic 35.0%
CCAAGAAAAGACATTGTTGA+TGG - chr3_4:11685892-11685911 None:intergenic 35.0%
! CCATCAACAATGTCTTTTCT+TGG + chr3_4:11685889-11685908 Msa0490240:CDS 35.0%
! ATGTCTTTTCTTGGTTCAAG+TGG + chr3_4:11685898-11685917 Msa0490240:CDS 35.0%
TGATCCTGAACATGGTAAAA+TGG - chr3_4:11685946-11685965 None:intergenic 35.0%
! GATAAGACTGCACAATCTTT+TGG + chr3_4:11685973-11685992 Msa0490240:CDS 35.0%
AATACATCGAGTTATGTGAG+GGG - chr3_4:11686026-11686045 None:intergenic 35.0%
GTAATACATCGAGTTATGTG+AGG - chr3_4:11686028-11686047 None:intergenic 35.0%
! AATTGCCATTTGATACGGAA+TGG - chr3_4:11686053-11686072 None:intergenic 35.0%
! AGAGGAATTGCCATTTGATA+CGG - chr3_4:11686058-11686077 None:intergenic 35.0%
TTTCTGGATATTGGAGTGAA+GGG - chr3_4:11686119-11686138 None:intergenic 35.0%
TGAACATGAATGAGACAGAA+TGG + chr3_4:11686385-11686404 Msa0490240:CDS 35.0%
GAACATGAATGAGACAGAAT+GGG + chr3_4:11686386-11686405 Msa0490240:CDS 35.0%
!! TTGTATTGGTGTTAACAGCA+TGG - chr3_4:11686467-11686486 None:intergenic 35.0%
CACACTTCTATATACACCTT+TGG + chr3_4:11686595-11686614 Msa0490240:intron 35.0%
TTGATGTTAGAAGTTTCTGC+AGG + chr3_4:11686827-11686846 Msa0490240:intron 35.0%
!! TAGATCGGTTTTCACTGTTT+GGG - chr3_4:11686892-11686911 None:intergenic 35.0%
!! ATAGATCGGTTTTCACTGTT+TGG - chr3_4:11686893-11686912 None:intergenic 35.0%
TGTCTATGTTGAACATCACT+TGG + chr3_4:11686912-11686931 Msa0490240:CDS 35.0%
! ATGTCATGTTAGCTTCAGAT+TGG + chr3_4:11686939-11686958 Msa0490240:CDS 35.0%
CCACATGCTTATAATCTGTT+AGG - chr3_4:11687015-11687034 None:intergenic 35.0%
CCTAACAGATTATAAGCATG+TGG + chr3_4:11687012-11687031 Msa0490240:CDS 35.0%
GGACTTATTCTTCAAGTACA+GGG + chr3_4:11687041-11687060 Msa0490240:CDS 35.0%
GACTTATTCTTCAAGTACAG+GGG + chr3_4:11687042-11687061 Msa0490240:CDS 35.0%
ACTTATTCTTCAAGTACAGG+GGG + chr3_4:11687043-11687062 Msa0490240:CDS 35.0%
! CGAAGAAAGAGCACAACATT+GGG - chr3_4:11682152-11682171 None:intergenic 40.0%
GTTTGTGAAGGAGTTGAAGA+AGG - chr3_4:11682182-11682201 None:intergenic 40.0%
! AAGTCTTGTCCCAGTAAGTT+AGG - chr3_4:11682892-11682911 None:intergenic 40.0%
TGGTCTCTTTCCTGATTTAC+AGG + chr3_4:11683157-11683176 Msa0490240:intron 40.0%
AACCCTTTCATCGTAAAGGA+TGG + chr3_4:11683247-11683266 Msa0490240:intron 40.0%
!! GATTCGCTTGGCTTTTAATG+TGG + chr3_4:11683269-11683288 Msa0490240:intron 40.0%
!!! TTCGATCTTAGTTTTGCGTG+GGG - chr3_4:11683379-11683398 None:intergenic 40.0%
!! GGTAATGGAGGAAGTGTTAA+TGG + chr3_4:11683601-11683620 Msa0490240:CDS 40.0%
!! AATGGAGGAAGTGTTAATGG+TGG + chr3_4:11683604-11683623 Msa0490240:CDS 40.0%
!! GTGGAGTTGTTCTGAAGAAA+GGG + chr3_4:11683623-11683642 Msa0490240:CDS 40.0%
! ATCTGCAGAAGACGCTATTT+TGG + chr3_4:11683654-11683673 Msa0490240:CDS 40.0%
!!! CTATTTTGGTTGACTACGTC+AGG + chr3_4:11683668-11683687 Msa0490240:CDS 40.0%
! AAAAAGTTGCCGTCTGAGAT+GGG + chr3_4:11683750-11683769 Msa0490240:CDS 40.0%
TGAGATGGGCAAATCACTTA+AGG + chr3_4:11683764-11683783 Msa0490240:CDS 40.0%
AGGATCATTTACTGCTGATG+AGG + chr3_4:11683801-11683820 Msa0490240:CDS 40.0%
ATCTGTTTCCCATTTCGGAA+TGG - chr3_4:11683846-11683865 None:intergenic 40.0%
ATTCCGAAATGGGAAACAGA+TGG + chr3_4:11683845-11683864 Msa0490240:CDS 40.0%
TTCCGAAATGGGAAACAGAT+GGG + chr3_4:11683846-11683865 Msa0490240:CDS 40.0%
GAAAACTAGATGCAAGGCAA+CGG - chr3_4:11683909-11683928 None:intergenic 40.0%
GCTCTGATATGAATGTCTTC+TGG - chr3_4:11684487-11684506 None:intergenic 40.0%
GTCGAAGCCTAATAAAAAGG+AGG + chr3_4:11684625-11684644 Msa0490240:intron 40.0%
AAAAGGAGGTTTCCAATGTC+AGG + chr3_4:11684639-11684658 Msa0490240:intron 40.0%
ATGATGTGATCACCTGACAT+TGG - chr3_4:11684654-11684673 None:intergenic 40.0%
! AGTACCTCTCTCGTCTTTTA+AGG + chr3_4:11685039-11685058 Msa0490240:intron 40.0%
ATGTCCTTAAAAGACGAGAG+AGG - chr3_4:11685046-11685065 None:intergenic 40.0%
TAATAGGGATTCTGCATGTG+GGG - chr3_4:11685109-11685128 None:intergenic 40.0%
GTAATAGGGATTCTGCATGT+GGG - chr3_4:11685110-11685129 None:intergenic 40.0%
AGTAATAGGGATTCTGCATG+TGG - chr3_4:11685111-11685130 None:intergenic 40.0%
AGATGCATCTCTCACTTTAG+AGG + chr3_4:11685300-11685319 Msa0490240:intron 40.0%
AAGAACTATCCTCCATCAAG+GGG + chr3_4:11685431-11685450 Msa0490240:intron 40.0%
ATAGCATTCTTTCCCCTTGA+TGG - chr3_4:11685446-11685465 None:intergenic 40.0%
ATTGTTCGCAAACGAACTTC+TGG - chr3_4:11685643-11685662 None:intergenic 40.0%
GTTCGTTTGCGAACAATGAA+AGG + chr3_4:11685646-11685665 Msa0490240:CDS 40.0%
! GGAATCAATGATGGTGATAG+AGG + chr3_4:11685694-11685713 Msa0490240:CDS 40.0%
GCAGAAATATCAGGATTCTC+GGG - chr3_4:11685817-11685836 None:intergenic 40.0%
!! AAAGACATTGTTGATGGCAC+AGG - chr3_4:11685886-11685905 None:intergenic 40.0%
CAAGTGGAACGAACAAGAAT+TGG + chr3_4:11685914-11685933 Msa0490240:CDS 40.0%
CAGAACTATGATCCTGAACA+TGG - chr3_4:11685954-11685973 None:intergenic 40.0%
! GTTTCTGGATATTGGAGTGA+AGG - chr3_4:11686120-11686139 None:intergenic 40.0%
TCACTCCAATATCCAGAAAC+CGG + chr3_4:11686120-11686139 Msa0490240:CDS 40.0%
ACATCAACAGACTCATTCAG+TGG - chr3_4:11686180-11686199 None:intergenic 40.0%
TCTACTACAACTCCTGTTGA+CGG + chr3_4:11686345-11686364 Msa0490240:CDS 40.0%
!! TAACCACTAAAGTTCTGAGC+AGG - chr3_4:11686510-11686529 None:intergenic 40.0%
!! AGATCGGTTTTCACTGTTTG+GGG - chr3_4:11686891-11686910 None:intergenic 40.0%
! TCTGAAGCTAACATGACATC+TGG - chr3_4:11686938-11686957 None:intergenic 40.0%
ACAGATTATAAGCATGTGGC+TGG + chr3_4:11687016-11687035 Msa0490240:CDS 40.0%
ATTATAAGCATGTGGCTGGT+GGG + chr3_4:11687020-11687039 Msa0490240:CDS 40.0%
GGGACTTATTCTTCAAGTAC+AGG + chr3_4:11687040-11687059 Msa0490240:CDS 40.0%
TGACATGGCACTTGAAACTT+TGG + chr3_4:11687262-11687281 Msa0490240:three_prime_UTR 40.0%
AGAGAATTGGAAGAGAGGAG+AGG - chr3_4:11682010-11682029 None:intergenic 45.0%
! GCGAAGAAAGAGCACAACAT+TGG - chr3_4:11682153-11682172 None:intergenic 45.0%
TGTTGTGCTCTTTCTTCGCT+CGG + chr3_4:11682154-11682173 Msa0490240:five_prime_UTR 45.0%
ATCCAGACCGAAGTTTGTGA+AGG - chr3_4:11682194-11682213 None:intergenic 45.0%
ATGTAGCCGACCTAACTTAC+TGG + chr3_4:11682879-11682898 Msa0490240:intron 45.0%
TGTAGCCGACCTAACTTACT+GGG + chr3_4:11682880-11682899 Msa0490240:intron 45.0%
CTTGTCCCAGTAAGTTAGGT+CGG - chr3_4:11682888-11682907 None:intergenic 45.0%
! TCGTAAAGGATGGATTCGCT+TGG + chr3_4:11683257-11683276 Msa0490240:intron 45.0%
!!! TCGATCTTAGTTTTGCGTGG+GGG - chr3_4:11683378-11683397 None:intergenic 45.0%
TGCTCTGCAACGATCAAACA+CGG + chr3_4:11683560-11683579 Msa0490240:CDS 45.0%
!! GGTGGAGTTGTTCTGAAGAA+AGG + chr3_4:11683622-11683641 Msa0490240:CDS 45.0%
!! AACGCTGTTCAGAAGCATTC+AGG + chr3_4:11683712-11683731 Msa0490240:CDS 45.0%
GAAAAAGTTGCCGTCTGAGA+TGG + chr3_4:11683749-11683768 Msa0490240:CDS 45.0%
! AGTGATTTGCCCATCTCAGA+CGG - chr3_4:11683762-11683781 None:intergenic 45.0%
TGCTCAACTCCATTCCGAAA+TGG + chr3_4:11683834-11683853 Msa0490240:CDS 45.0%
GCTCAACTCCATTCCGAAAT+GGG + chr3_4:11683835-11683854 Msa0490240:CDS 45.0%
TGCCCATCTGTTTCCCATTT+CGG - chr3_4:11683851-11683870 None:intergenic 45.0%
CACATCACTGACATCACCTA+TGG - chr3_4:11683988-11684007 None:intergenic 45.0%
ACTTTACACTGACAGCGTAG+TGG + chr3_4:11684281-11684300 Msa0490240:intron 45.0%
AATAGGGATTCTGCATGTGG+GGG - chr3_4:11685108-11685127 None:intergenic 45.0%
AAAGGGAGTAAACATGGCCA+AGG + chr3_4:11685664-11685683 Msa0490240:CDS 45.0%
GATGGCACAGGATTGCAATA+TGG - chr3_4:11685874-11685893 None:intergenic 45.0%
TTGCATTCTCCTCTTGATCC+TGG + chr3_4:11685997-11686016 Msa0490240:CDS 45.0%
TACCGCCATTCCGTATCAAA+TGG + chr3_4:11686045-11686064 Msa0490240:CDS 45.0%
! TGCCATTTGATACGGAATGG+CGG - chr3_4:11686050-11686069 None:intergenic 45.0%
TACTTCTAAGCCGACATCCA+AGG + chr3_4:11686077-11686096 Msa0490240:CDS 45.0%
AACTTCACAGCCTTGGATGT+CGG - chr3_4:11686090-11686109 None:intergenic 45.0%
! CAAAGCCGGTTTCTGGATAT+TGG - chr3_4:11686128-11686147 None:intergenic 45.0%
! CAATATCCAGAAACCGGCTT+TGG + chr3_4:11686126-11686145 Msa0490240:CDS 45.0%
AGACTCATTCAGTGGAGATG+GGG - chr3_4:11686172-11686191 None:intergenic 45.0%
CAGACTCATTCAGTGGAGAT+GGG - chr3_4:11686173-11686192 None:intergenic 45.0%
ACAGACTCATTCAGTGGAGA+TGG - chr3_4:11686174-11686193 None:intergenic 45.0%
! TCGAGCGTGCCACTATTATT+TGG - chr3_4:11686255-11686274 None:intergenic 45.0%
AAATAATAGTGGCACGCTCG+AGG + chr3_4:11686254-11686273 Msa0490240:CDS 45.0%
AGGATTGAGGTTGCACCAAA+GGG - chr3_4:11686435-11686454 None:intergenic 45.0%
ATGGCACTCATTCAGGATTG+AGG - chr3_4:11686448-11686467 None:intergenic 45.0%
TAACAGCATGGCACTCATTC+AGG - chr3_4:11686455-11686474 None:intergenic 45.0%
ACACCTGCTCAGAACTTTAG+TGG + chr3_4:11686504-11686523 Msa0490240:CDS 45.0%
! CACTGTTTGGGGTAGAAACT+TGG - chr3_4:11686880-11686899 None:intergenic 45.0%
ATTGGCATGAGCAGTGCTAT+GGG + chr3_4:11686957-11686976 Msa0490240:CDS 45.0%
! TGTTAGGTTGTCACTAGCCT+CGG - chr3_4:11686999-11687018 None:intergenic 45.0%
GATTATAAGCATGTGGCTGG+TGG + chr3_4:11687019-11687038 Msa0490240:CDS 45.0%
!! TTAAATAATCTAAATATTTA+TGG + chr3_4:11684305-11684324 Msa0490240:intron 5.0%
!! AGGAGGTGGTGGAAATGGAA+TGG - chr3_4:11681990-11682009 None:intergenic 50.0%
GAATTGGAAGAGAGGAGAGG+AGG - chr3_4:11682007-11682026 None:intergenic 50.0%
CTCCTTCACAAACTTCGGTC+TGG + chr3_4:11682189-11682208 Msa0490240:intron 50.0%
GCAACGATCAAACACGGTCA+CGG + chr3_4:11683566-11683585 Msa0490240:CDS 50.0%
! TCGAATGGTGAGGGTAATGG+AGG + chr3_4:11683589-11683608 Msa0490240:CDS 50.0%
!! TTGTTCTGAAGAAAGGGCCG+TGG + chr3_4:11683629-11683648 Msa0490240:CDS 50.0%
GTTGACTACGTCAGGAAGCA+TGG + chr3_4:11683676-11683695 Msa0490240:CDS 50.0%
! TACGTCAGGAAGCATGGAGA+AGG + chr3_4:11683682-11683701 Msa0490240:CDS 50.0%
CATTCAGGCTTGTCTCGTTG+TGG + chr3_4:11683727-11683746 Msa0490240:CDS 50.0%
AAGGACATGCTACTGTCGGA+TGG + chr3_4:11685058-11685077 Msa0490240:intron 50.0%
AGGACATGCTACTGTCGGAT+GGG + chr3_4:11685059-11685078 Msa0490240:intron 50.0%
GCATTCTTTCCCCTTGATGG+AGG - chr3_4:11685443-11685462 None:intergenic 50.0%
ATTGGAATACCCGGACCAAG+AGG + chr3_4:11685587-11685606 Msa0490240:CDS 50.0%
! CGAACTTCTGGAGGATAGAG+TGG - chr3_4:11685631-11685650 None:intergenic 50.0%
GTTCGCAAACGAACTTCTGG+AGG - chr3_4:11685640-11685659 None:intergenic 50.0%
AGTAAACATGGCCAAGGCAC+TGG + chr3_4:11685670-11685689 Msa0490240:CDS 50.0%
!! CATTGATTCCACCAGTGCCT+TGG - chr3_4:11685684-11685703 None:intergenic 50.0%
!! GGCACTGGTGGAATCAATGA+TGG + chr3_4:11685685-11685704 Msa0490240:CDS 50.0%
GGCACAGGATTGCAATATGG+AGG - chr3_4:11685871-11685890 None:intergenic 50.0%
!! GGATGTCGGCTTAGAAGTAG+AGG - chr3_4:11686076-11686095 None:intergenic 50.0%
GACATCCAAGGCTGTGAAGT+TGG + chr3_4:11686089-11686108 Msa0490240:CDS 50.0%
! TATCCAGAAACCGGCTTTGG+TGG + chr3_4:11686129-11686148 Msa0490240:CDS 50.0%
GACTCATTCAGTGGAGATGG+GGG - chr3_4:11686171-11686190 None:intergenic 50.0%
AATCAGTCTCCTCTGCCACA+TGG + chr3_4:11686204-11686223 Msa0490240:CDS 50.0%
ACTACAACTCCTGTTGACGG+AGG + chr3_4:11686348-11686367 Msa0490240:CDS 50.0%
TTGCACCAAAGGGAGATGCA+GGG - chr3_4:11686425-11686444 None:intergenic 50.0%
CAGGATTGAGGTTGCACCAA+AGG - chr3_4:11686436-11686455 None:intergenic 50.0%
! GAAGTCTTGCATGGTGCCAA+AGG - chr3_4:11686614-11686633 None:intergenic 50.0%
GGGGTAGAAACTTGGTCAAC+AGG - chr3_4:11686872-11686891 None:intergenic 50.0%
GATTGGCATGAGCAGTGCTA+TGG + chr3_4:11686956-11686975 Msa0490240:CDS 50.0%
!! AGGAGAGGAGGTGGTGGAAA+TGG - chr3_4:11681995-11682014 None:intergenic 55.0%
TTGGAAGAGAGGAGAGGAGG+TGG - chr3_4:11682004-11682023 None:intergenic 55.0%
TGTCGTGACGTTACGTGTCC+CGG + chr3_4:11683351-11683370 Msa0490240:intron 55.0%
!!! TTAGTTTTGCGTGGGGGACC+GGG - chr3_4:11683372-11683391 None:intergenic 55.0%
!!! CTTAGTTTTGCGTGGGGGAC+CGG - chr3_4:11683373-11683392 None:intergenic 55.0%
CAAACACGGTCACGGTCGAA+TGG + chr3_4:11683574-11683593 Msa0490240:CDS 55.0%
CGGTCGAATGGTGAGGGTAA+TGG + chr3_4:11683586-11683605 Msa0490240:CDS 55.0%
GCGTCTTCTGCAGATGTCCA+CGG - chr3_4:11683649-11683668 None:intergenic 55.0%
! GGAAGCATGGAGAAGGCAAC+TGG + chr3_4:11683689-11683708 Msa0490240:CDS 55.0%
GGGAAACAGATGGGCACGTA+TGG + chr3_4:11683855-11683874 Msa0490240:CDS 55.0%
GGACATGCTACTGTCGGATG+GGG + chr3_4:11685060-11685079 Msa0490240:intron 55.0%
!! AAACATGGCCAAGGCACTGG+TGG + chr3_4:11685673-11685692 Msa0490240:CDS 55.0%
GAGTTATGTGAGGGGAGACC+AGG - chr3_4:11686018-11686037 None:intergenic 55.0%
GAGCTCCAACTTCACAGCCT+TGG - chr3_4:11686097-11686116 None:intergenic 55.0%
! AGAAACCGGCTTTGGTGGCT+GGG + chr3_4:11686134-11686153 Msa0490240:CDS 55.0%
GAACTCTCACCTCCGTCAAC+AGG - chr3_4:11686360-11686379 None:intergenic 55.0%
ACTGACCCTGCATCTCCCTT+TGG + chr3_4:11686417-11686436 Msa0490240:CDS 55.0%
GTTGCACCAAAGGGAGATGC+AGG - chr3_4:11686426-11686445 None:intergenic 55.0%
GCACGAGAAGAACATGACCG+AGG + chr3_4:11686979-11686998 Msa0490240:CDS 55.0%
! AGGGGGTCGCTTTATGCACA+TGG + chr3_4:11687060-11687079 Msa0490240:CDS 55.0%
GAAGAGAGGAGAGGAGGTGG+TGG - chr3_4:11682001-11682020 None:intergenic 60.0%
ACGGTCACGGTCGAATGGTG+AGG + chr3_4:11683579-11683598 Msa0490240:CDS 60.0%
CGGTCACGGTCGAATGGTGA+GGG + chr3_4:11683580-11683599 Msa0490240:CDS 60.0%
GATCAAATCCCCCGTGGCTG+TGG - chr3_4:11685086-11685105 None:intergenic 60.0%
GAGGGGAGACCAGGATCAAG+AGG - chr3_4:11686009-11686028 None:intergenic 60.0%
! CAGCCACCAAAGCCGGTTTC+TGG - chr3_4:11686135-11686154 None:intergenic 60.0%
! CAGAAACCGGCTTTGGTGGC+TGG + chr3_4:11686133-11686152 Msa0490240:CDS 60.0%
! GAAACCGGCTTTGGTGGCTG+GGG + chr3_4:11686135-11686154 Msa0490240:CDS 60.0%
! AAACCGGCTTTGGTGGCTGG+GGG + chr3_4:11686136-11686155 Msa0490240:CDS 60.0%
TCTTGCGCACCATGTGGCAG+AGG - chr3_4:11686216-11686235 None:intergenic 60.0%
CCACATGGTGCGCAAGAGTC+CGG + chr3_4:11686219-11686238 Msa0490240:CDS 60.0%
GTGGGGGATCAAATCCCCCG+TGG - chr3_4:11685092-11685111 None:intergenic 65.0%
CCGATGACGCCTCTTGGTCC+GGG - chr3_4:11685599-11685618 None:intergenic 65.0%
!! CCCGGACCAAGAGGCGTCAT+CGG + chr3_4:11685596-11685615 Msa0490240:CDS 65.0%
CCCGATGACGCCTCTTGGTC+CGG - chr3_4:11685600-11685619 None:intergenic 65.0%
!! CCGGACCAAGAGGCGTCATC+GGG + chr3_4:11685597-11685616 Msa0490240:CDS 65.0%
!! ACCAAGAGGCGTCATCGGGC+TGG + chr3_4:11685601-11685620 Msa0490240:CDS 65.0%
! AACCGGCTTTGGTGGCTGGG+GGG + chr3_4:11686137-11686156 Msa0490240:CDS 65.0%
CCGGACTCTTGCGCACCATG+TGG - chr3_4:11686222-11686241 None:intergenic 65.0%
GTCGGATGGGGCCACAGCCA+CGG + chr3_4:11685072-11685091 Msa0490240:intron 70.0%
TCGGATGGGGCCACAGCCAC+GGG + chr3_4:11685073-11685092 Msa0490240:intron 70.0%
GCCAGCCCGATGACGCCTCT+TGG - chr3_4:11685605-11685624 None:intergenic 70.0%
! ACCGGCTTTGGTGGCTGGGG+GGG + chr3_4:11686138-11686157 Msa0490240:CDS 70.0%
ACCCCCCCAGCCACCAAAGC+CGG - chr3_4:11686142-11686161 None:intergenic 70.0%
CGGATGGGGCCACAGCCACG+GGG + chr3_4:11685074-11685093 Msa0490240:intron 75.0%
GGATGGGGCCACAGCCACGG+GGG + chr3_4:11685075-11685094 Msa0490240:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 11681985 11687303 11681985 ID=Msa0490240;Name=Msa0490240
chr3_4 mRNA 11681985 11687303 11681985 ID=Msa0490240-mRNA-1;Parent=Msa0490240;Name=Msa0490240-mRNA-1;_AED=0.23;_eAED=0.23;_QI=370|1|1|1|0.4|0.33|6|216|523
chr3_4 exon 11681985 11682012 11681985 ID=Msa0490240-mRNA-1:exon:3601;Parent=Msa0490240-mRNA-1
chr3_4 exon 11682033 11682205 11682033 ID=Msa0490240-mRNA-1:exon:3602;Parent=Msa0490240-mRNA-1
chr3_4 exon 11682445 11682593 11682445 ID=Msa0490240-mRNA-1:exon:3603;Parent=Msa0490240-mRNA-1
chr3_4 exon 11683506 11683885 11683506 ID=Msa0490240-mRNA-1:exon:3604;Parent=Msa0490240-mRNA-1
chr3_4 exon 11685553 11686525 11685553 ID=Msa0490240-mRNA-1:exon:3605;Parent=Msa0490240-mRNA-1
chr3_4 exon 11686849 11687303 11686849 ID=Msa0490240-mRNA-1:exon:3606;Parent=Msa0490240-mRNA-1
chr3_4 five_prime_UTR 11681985 11682012 11681985 ID=Msa0490240-mRNA-1:five_prime_utr;Parent=Msa0490240-mRNA-1
chr3_4 five_prime_UTR 11682033 11682205 11682033 ID=Msa0490240-mRNA-1:five_prime_utr;Parent=Msa0490240-mRNA-1
chr3_4 five_prime_UTR 11682445 11682593 11682445 ID=Msa0490240-mRNA-1:five_prime_utr;Parent=Msa0490240-mRNA-1
chr3_4 five_prime_UTR 11683506 11683525 11683506 ID=Msa0490240-mRNA-1:five_prime_utr;Parent=Msa0490240-mRNA-1
chr3_4 CDS 11683526 11683885 11683526 ID=Msa0490240-mRNA-1:cds;Parent=Msa0490240-mRNA-1
chr3_4 CDS 11685553 11686525 11685553 ID=Msa0490240-mRNA-1:cds;Parent=Msa0490240-mRNA-1
chr3_4 CDS 11686849 11687087 11686849 ID=Msa0490240-mRNA-1:cds;Parent=Msa0490240-mRNA-1
chr3_4 three_prime_UTR 11687088 11687303 11687088 ID=Msa0490240-mRNA-1:three_prime_utr;Parent=Msa0490240-mRNA-1
Gene Sequence

>Msa0490240

ATGAGTCGAGTGAAAAATGAGATTGAAGATGATATGCTCTGCAACGATCAAACACGGTCACGGTCGAATGGTGAGGGTAATGGAGGAAGTGTTAATGGTGGAGTTGTTCTGAAGAAAGGGCCGTGGACATCTGCAGAAGACGCTATTTTGGTTGACTACGTCAGGAAGCATGGAGAAGGCAACTGGAACGCTGTTCAGAAGCATTCAGGCTTGTCTCGTTGTGGAAAAAGTTGCCGTCTGAGATGGGCAAATCACTTAAGGCCAAATTTAAAGAAAGGATCATTTACTGCTGATGAGGAGCATTTGATTGCTCAACTCCATTCCGAAATGGGAAACAGATGGGCACGTATGGCTGCGCACTTGCCTGGTCGTACAGATAATGAAATAAAGAACTATTGGAATACCCGGACCAAGAGGCGTCATCGGGCTGGCTTGCCACTCTATCCTCCAGAAGTTCGTTTGCGAACAATGAAAGGGAGTAAACATGGCCAAGGCACTGGTGGAATCAATGATGGTGATAGAGGGCATCATGATTTCTTGCCGAAAAACAACTATGAGATGCATGATGCAATATTTGACAATTTGAAGGAAAATCAGGGAATCTTGCCTATTACAATTTTGCCCGAGAATCCTGATATTTCTGCTAATAGCATTATGCGAAACAGTCTTGATTCTCCTCCATATTGCAATCCTGTGCCATCAACAATGTCTTTTCTTGGTTCAAGTGGAACGAACAAGAATTGGTTTTATCCATTTTACCATGTTCAGGATCATAGTTCTGATAAGACTGCACAATCTTTTGGATTGCATTCTCCTCTTGATCCTGGTCTCCCCTCACATAACTCGATGTATTACCGCCATTCCGTATCAAATGGCAATTCCTCTACTTCTAAGCCGACATCCAAGGCTGTGAAGTTGGAGCTCCCTTCACTCCAATATCCAGAAACCGGCTTTGGTGGCTGGGGGGGTAACTTTCCCCCATCTCCACTGAATGAGTCTGTTGATGTATTCAATCAGTCTCCTCTGCCACATGGTGCGCAAGAGTCCGGTTGTTCTTCACCAAATAATAGTGGCACGCTCGAGGCCATTATTTATCAGAAGAAGACACTTCCAAATTCAAATAACAATTGTTCTGACAAGAGTTCACATTCATCTACTACAACTCCTGTTGACGGAGGTGAGAGTTCTGCTTTGAACATGAATGAGACAGAATGGGATGACTACACTGACCCTGCATCTCCCTTTGGTGCAACCTCAATCCTGAATGAGTGCCATGCTGTTAACACCAATACAAACTCATGGGATAAATTGACACCTGCTCAGAACTTTAGTGGCAGCAATGTTAAATATGAGCCTGTTGACCAAGTTTCTACCCCAAACAGTGAAAACCGATCTATGTCTATGTTGAACATCACTTGGCCAGATGTCATGTTAGCTTCAGATTGGCATGAGCAGTGCTATGGGCACGAGAAGAACATGACCGAGGCTAGTGACAACCTAACAGATTATAAGCATGTGGCTGGTGGGACTTATTCTTCAAGTACAGGGGGTCGCTTTATGCACATGGCATGA
Protein sequence

>Msa0490240

MSRVKNEIEDDMLCNDQTRSRSNGEGNGGSVNGGVVLKKGPWTSAEDAILVDYVRKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGSFTADEEHLIAQLHSEMGNRWARMAAHLPGRTDNEIKNYWNTRTKRRHRAGLPLYPPEVRLRTMKGSKHGQGTGGINDGDRGHHDFLPKNNYEMHDAIFDNLKENQGILPITILPENPDISANSIMRNSLDSPPYCNPVPSTMSFLGSSGTNKNWFYPFYHVQDHSSDKTAQSFGLHSPLDPGLPSHNSMYYRHSVSNGNSSTSKPTSKAVKLELPSLQYPETGFGGWGGNFPPSPLNESVDVFNQSPLPHGAQESGCSSPNNSGTLEAIIYQKKTLPNSNNNCSDKSSHSSTTTPVDGGESSALNMNETEWDDYTDPASPFGATSILNECHAVNTNTNSWDKLTPAQNFSGSNVKYEPVDQVSTPNSENRSMSMLNITWPDVMLASDWHEQCYGHEKNMTEASDNLTDYKHVAGGTYSSSTGGRFMHMA*