Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500070 | XP_003600003.2 | 81.048 | 248 | 34 | 2 | 10 | 257 | 1 | 235 | 1.11e-142 | 410 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500070 | sp|Q9LT81|C3H39_ARATH | 36.972 | 284 | 117 | 6 | 32 | 253 | 93 | 376 | 7.24e-48 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500070 | G7J1X0 | 81.048 | 248 | 34 | 2 | 10 | 257 | 1 | 235 | 5.29e-143 | 410 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0500070 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500070 | MtrunA17_Chr3g0098251 | 80.851 | 188 | 27 | 1 | 10 | 197 | 1 | 179 | 5.41e-109 | 313 |
| Msa0500070 | MtrunA17_Chr4g0063401 | 56.098 | 205 | 64 | 6 | 16 | 195 | 44 | 247 | 1.47e-67 | 209 |
| Msa0500070 | MtrunA17_Chr8g0360671 | 77.037 | 135 | 14 | 2 | 64 | 196 | 40 | 159 | 5.29e-67 | 205 |
| Msa0500070 | MtrunA17_Chr4g0063361 | 50.246 | 203 | 89 | 4 | 5 | 195 | 39 | 241 | 8.10e-60 | 189 |
| Msa0500070 | MtrunA17_Chr4g0063391 | 46.364 | 220 | 95 | 5 | 1 | 202 | 1 | 215 | 7.02e-58 | 184 |
| Msa0500070 | MtrunA17_Chr4g0063371 | 39.630 | 270 | 102 | 8 | 1 | 249 | 1 | 230 | 2.27e-48 | 159 |
| Msa0500070 | MtrunA17_Chr8g0366501 | 27.397 | 292 | 131 | 7 | 37 | 250 | 86 | 374 | 5.23e-26 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500070 | AT3G19360.1 | 36.972 | 284 | 117 | 6 | 32 | 253 | 93 | 376 | 7.36e-49 | 166 |
| Msa0500070 | AT3G19360.2 | 36.972 | 284 | 117 | 6 | 32 | 253 | 93 | 376 | 7.36e-49 | 166 |
| Msa0500070 | AT1G32360.1 | 27.961 | 304 | 123 | 7 | 37 | 250 | 85 | 382 | 5.43e-23 | 97.1 |
Find 80 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTTGCCCTCTTGTTCTT+TGG | 0.226992 | 3_4:-39985798 | None:intergenic |
| CGGAGATGGTTCTAATAGTT+TGG | 0.293400 | 3_4:+39986199 | Msa0500070:CDS |
| TCCTCTGCACTTGGCTAGTT+GGG | 0.297541 | 3_4:-39987565 | None:intergenic |
| ACCAAATGTCTTACCAGTTT+CGG | 0.309904 | 3_4:+39987393 | Msa0500070:CDS |
| ATAGACTTAGGGATGATTCT+TGG | 0.310304 | 3_4:+39986138 | Msa0500070:CDS |
| AAACAGGGCGCTGTCCCTTT+GGG | 0.314602 | 3_4:+39986294 | Msa0500070:CDS |
| CTCGTATTTGTCATAAGTTC+AGG | 0.326388 | 3_4:+39985898 | Msa0500070:CDS |
| GGCTAGTTGGGTAGAATTAG+AGG | 0.330401 | 3_4:-39987553 | None:intergenic |
| CAAACAGGGCGCTGTCCCTT+TGG | 0.343335 | 3_4:+39986293 | Msa0500070:CDS |
| CTCCTCTGCACTTGGCTAGT+TGG | 0.355356 | 3_4:-39987566 | None:intergenic |
| TAAGGAAGCCATTGCCGAAT+TGG | 0.366423 | 3_4:+39985976 | Msa0500070:CDS |
| TGTCCCACGTGGCAGCAAAC+AGG | 0.371812 | 3_4:+39986278 | Msa0500070:CDS |
| GCCGAAACTGGTAAGACATT+TGG | 0.383760 | 3_4:-39987394 | None:intergenic |
| TTGCCACACCTAGACTTGTT+GGG | 0.387975 | 3_4:-39987438 | None:intergenic |
| TCGCCTGTTTCTTTGTTTGA+TGG | 0.390448 | 3_4:-39985861 | None:intergenic |
| TTCCGGTAAGTGCCCCTTGA+TGG | 0.393985 | 3_4:-39986245 | None:intergenic |
| TTTGCCACACCTAGACTTGT+TGG | 0.401025 | 3_4:-39987439 | None:intergenic |
| GTTGCATCATTAGCCGAAAC+TGG | 0.407624 | 3_4:-39987406 | None:intergenic |
| ACCTAGACTTGTTGGGATGC+TGG | 0.423276 | 3_4:-39987431 | None:intergenic |
| CTAATAGTTTGGAAGGCAAC+AGG | 0.423700 | 3_4:+39986210 | Msa0500070:CDS |
| ATGATATCGCTGTGGTGGTC+TGG | 0.425060 | 3_4:-39985771 | None:intergenic |
| AGAAGAAGCCTTTACTTTGG+TGG | 0.434420 | 3_4:+39987479 | Msa0500070:CDS |
| CAAGGAATGGATGCAGTGTC+TGG | 0.436419 | 3_4:+39986022 | Msa0500070:CDS |
| AGCCATCAAGGGGCACTTAC+CGG | 0.436557 | 3_4:+39986243 | Msa0500070:CDS |
| ATTTGTCATAAGTTCAGGTT+TGG | 0.439137 | 3_4:+39985903 | Msa0500070:CDS |
| TTTAATTTCCACCAAAGTAA+AGG | 0.443077 | 3_4:-39987487 | None:intergenic |
| CTTCCATCAAACAAAGAAAC+AGG | 0.444809 | 3_4:+39985858 | Msa0500070:CDS |
| TCCGATACTTCCAATGCTTA+AGG | 0.447887 | 3_4:-39986180 | None:intergenic |
| TGGGACACAGCTTAATCTTC+CGG | 0.449247 | 3_4:-39986262 | None:intergenic |
| CACTATGCTCACGGAGAAGC+AGG | 0.450518 | 3_4:+39986326 | Msa0500070:CDS |
| TCAATACTATATATGCTGAT+TGG | 0.453146 | 3_4:+39987518 | Msa0500070:CDS |
| AATGGTGAGGAATGTCCTTA+TGG | 0.454214 | 3_4:+39986095 | Msa0500070:CDS |
| GTTTCTTTGTTTGATGGAAG+AGG | 0.456265 | 3_4:-39985855 | None:intergenic |
| CAGAAAATCATTCACAAGAT+GGG | 0.463529 | 3_4:+39986053 | Msa0500070:CDS |
| CTAAGAAGAAGCCTTTACTT+TGG | 0.468701 | 3_4:+39987476 | Msa0500070:CDS |
| TCAGAAAATCATTCACAAGA+TGG | 0.481007 | 3_4:+39986052 | Msa0500070:CDS |
| CTCACGGGGTTGGTGAGATA+AGG | 0.482058 | 3_4:+39985958 | Msa0500070:CDS |
| TCTAGGTGTGGCAAAGGAAG+TGG | 0.482685 | 3_4:+39987447 | Msa0500070:CDS |
| GGTCTGTGAACAAGCCATCA+AGG | 0.487139 | 3_4:+39986231 | Msa0500070:CDS |
| TTTCTTTGTTTGATGGAAGA+GGG | 0.487321 | 3_4:-39985854 | None:intergenic |
| CCAGCTAGCTCCTTCCAATT+CGG | 0.489768 | 3_4:-39985990 | None:intergenic |
| TAGGTACAATGTTCACCTTT+CGG | 0.492110 | 3_4:-39985933 | None:intergenic |
| AAACAACACTTATCACCATA+AGG | 0.495083 | 3_4:-39986110 | None:intergenic |
| CTGGCTCTCGCAGCAAGGAA+TGG | 0.502304 | 3_4:+39986009 | Msa0500070:CDS |
| AACATTGTACCTATGCTCAC+GGG | 0.508915 | 3_4:+39985943 | Msa0500070:CDS |
| CCGAATTGGAAGGAGCTAGC+TGG | 0.513357 | 3_4:+39985990 | Msa0500070:CDS |
| AGCTCCTTCCAATTCGGCAA+TGG | 0.514329 | 3_4:-39985984 | None:intergenic |
| GCCTTAAGCATTGGAAGTAT+CGG | 0.520735 | 3_4:+39986179 | Msa0500070:CDS |
| GAGGCCTGTGCCTTAAGCAT+TGG | 0.522134 | 3_4:+39986170 | Msa0500070:CDS |
| GTCTGTGAACAAGCCATCAA+GGG | 0.530594 | 3_4:+39986232 | Msa0500070:CDS |
| GATGGTTCTAATAGTTTGGA+AGG | 0.532918 | 3_4:+39986203 | Msa0500070:CDS |
| CGCCCTGTTTGCTGCCACGT+GGG | 0.535740 | 3_4:-39986281 | None:intergenic |
| GTCCCACGTGGCAGCAAACA+GGG | 0.536127 | 3_4:+39986279 | Msa0500070:CDS |
| ACTTCCAATGCTTAAGGCAC+AGG | 0.544832 | 3_4:-39986174 | None:intergenic |
| TAGTGAAAGTCGTCCCCAAA+GGG | 0.546109 | 3_4:-39986308 | None:intergenic |
| TGTACCTATGCTCACGGGGT+TGG | 0.546278 | 3_4:+39985948 | Msa0500070:CDS |
| AACAGGGCGCTGTCCCTTTG+GGG | 0.562619 | 3_4:+39986295 | Msa0500070:CDS |
| AGGTTTGGTAATTGTCCGAA+AGG | 0.564006 | 3_4:+39985918 | Msa0500070:CDS |
| ACCAGCATCCCAACAAGTCT+AGG | 0.572783 | 3_4:+39987430 | Msa0500070:CDS |
| AACAAGTCTAGGTGTGGCAA+AGG | 0.574700 | 3_4:+39987441 | Msa0500070:CDS |
| GACGACTTTCACTATGCTCA+CGG | 0.575931 | 3_4:+39986317 | Msa0500070:CDS |
| GAACATTGTACCTATGCTCA+CGG | 0.579167 | 3_4:+39985942 | Msa0500070:CDS |
| AGCATTGGAAGTATCGGAGA+TGG | 0.590771 | 3_4:+39986185 | Msa0500070:CDS |
| GAAGCCATTGCCGAATTGGA+AGG | 0.591683 | 3_4:+39985980 | Msa0500070:CDS |
| TCATGTTTCCAAAGAACAAG+AGG | 0.592600 | 3_4:+39985790 | Msa0500070:CDS |
| AGAAAATCATTCACAAGATG+GGG | 0.602501 | 3_4:+39986054 | Msa0500070:CDS |
| GCGCCCTGTTTGCTGCCACG+TGG | 0.603324 | 3_4:-39986282 | None:intergenic |
| GCTAGCTGGCTCTCGCAGCA+AGG | 0.609767 | 3_4:+39986004 | Msa0500070:CDS |
| CTCACCAACCCCGTGAGCAT+AGG | 0.617079 | 3_4:-39985952 | None:intergenic |
| ATAGTGAAAGTCGTCCCCAA+AGG | 0.638930 | 3_4:-39986309 | None:intergenic |
| CATGTTTCCAAAGAACAAGA+GGG | 0.650159 | 3_4:+39985791 | Msa0500070:CDS |
| CATCCCAACAAGTCTAGGTG+TGG | 0.656724 | 3_4:+39987435 | Msa0500070:CDS |
| TCTGTGAACAAGCCATCAAG+GGG | 0.665966 | 3_4:+39986233 | Msa0500070:CDS |
| CAAGAAATACTACAATGGTG+AGG | 0.666991 | 3_4:+39986082 | Msa0500070:CDS |
| CTATGCAAGAAATACTACAA+TGG | 0.669884 | 3_4:+39986077 | Msa0500070:CDS |
| GAAACATGATATCGCTGTGG+TGG | 0.671066 | 3_4:-39985776 | None:intergenic |
| TGATTCTTGGAAATCAAGAG+AGG | 0.676002 | 3_4:+39986151 | Msa0500070:CDS |
| ACATTGTACCTATGCTCACG+GGG | 0.692970 | 3_4:+39985944 | Msa0500070:CDS |
| AGATTAAGCTGTGTCCCACG+TGG | 0.719151 | 3_4:+39986267 | Msa0500070:CDS |
| TTGGAAACATGATATCGCTG+TGG | 0.734366 | 3_4:-39985779 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTAAAAAAAATTACAAGA+CGG | + | chr3_4:39987310-39987329 | Msa0500070:intron | 15.0% |
| !! | TGTTAAAAAAAATTACAAGA+CGG | + | chr3_4:39987310-39987329 | Msa0500070:intron | 15.0% |
| !! | TATAAAATATTGTGAAACAG+CGG | - | chr3_4:39986959-39986978 | None:intergenic | 20.0% |
| !!! | TCACAATATTTTATACTAGA+TGG | + | chr3_4:39986964-39986983 | Msa0500070:intron | 20.0% |
| !!! | CACAATATTTTATACTAGAT+GGG | + | chr3_4:39986965-39986984 | Msa0500070:intron | 20.0% |
| !!! | ACAATATTTTATACTAGATG+GGG | + | chr3_4:39986966-39986985 | Msa0500070:intron | 20.0% |
| !! | TTATAACAATCAAAACTGTT+TGG | + | chr3_4:39987333-39987352 | Msa0500070:intron | 20.0% |
| !! | TATAAAATATTGTGAAACAG+CGG | - | chr3_4:39986959-39986978 | None:intergenic | 20.0% |
| !!! | TCACAATATTTTATACTAGA+TGG | + | chr3_4:39986964-39986983 | Msa0500070:intron | 20.0% |
| !!! | CACAATATTTTATACTAGAT+GGG | + | chr3_4:39986965-39986984 | Msa0500070:intron | 20.0% |
| !!! | ACAATATTTTATACTAGATG+GGG | + | chr3_4:39986966-39986985 | Msa0500070:intron | 20.0% |
| !! | TTATAACAATCAAAACTGTT+TGG | + | chr3_4:39987333-39987352 | Msa0500070:intron | 20.0% |
| !! | TTGTTTTCTTCATAGACTTA+GGG | + | chr3_4:39986127-39986146 | Msa0500070:CDS | 25.0% |
| ! | GGTAATGATAATATTGGTAT+TGG | + | chr3_4:39986347-39986366 | Msa0500070:intron | 25.0% |
| !! | TTTTCGCTATTTAACTAGAA+TGG | + | chr3_4:39987017-39987036 | Msa0500070:intron | 25.0% |
| ! | ATTTGTACATTTCTCATTCA+AGG | + | chr3_4:39987113-39987132 | Msa0500070:intron | 25.0% |
| !!! | TCATTCAAGGTTTTAAATTG+TGG | + | chr3_4:39987126-39987145 | Msa0500070:intron | 25.0% |
| !! | TTTAATTTCCACCAAAGTAA+AGG | - | chr3_4:39987490-39987509 | None:intergenic | 25.0% |
| ! | TCAATACTATATATGCTGAT+TGG | + | chr3_4:39987518-39987537 | Msa0500070:CDS | 25.0% |
| !! | TTGTTTTCTTCATAGACTTA+GGG | + | chr3_4:39986127-39986146 | Msa0500070:CDS | 25.0% |
| ! | GGTAATGATAATATTGGTAT+TGG | + | chr3_4:39986347-39986366 | Msa0500070:intron | 25.0% |
| !! | TTTTCGCTATTTAACTAGAA+TGG | + | chr3_4:39987017-39987036 | Msa0500070:intron | 25.0% |
| ! | ATTTGTACATTTCTCATTCA+AGG | + | chr3_4:39987113-39987132 | Msa0500070:intron | 25.0% |
| !!! | TCATTCAAGGTTTTAAATTG+TGG | + | chr3_4:39987126-39987145 | Msa0500070:intron | 25.0% |
| !! | TTTAATTTCCACCAAAGTAA+AGG | - | chr3_4:39987490-39987509 | None:intergenic | 25.0% |
| ! | TCAATACTATATATGCTGAT+TGG | + | chr3_4:39987518-39987537 | Msa0500070:CDS | 25.0% |
| ! | TTTCTTTGTTTGATGGAAGA+GGG | - | chr3_4:39985857-39985876 | None:intergenic | 30.0% |
| ! | ATTTGTCATAAGTTCAGGTT+TGG | + | chr3_4:39985903-39985922 | Msa0500070:CDS | 30.0% |
| TCAGAAAATCATTCACAAGA+TGG | + | chr3_4:39986052-39986071 | Msa0500070:CDS | 30.0% | |
| CAGAAAATCATTCACAAGAT+GGG | + | chr3_4:39986053-39986072 | Msa0500070:CDS | 30.0% | |
| AGAAAATCATTCACAAGATG+GGG | + | chr3_4:39986054-39986073 | Msa0500070:CDS | 30.0% | |
| CTATGCAAGAAATACTACAA+TGG | + | chr3_4:39986077-39986096 | Msa0500070:CDS | 30.0% | |
| AAACAACACTTATCACCATA+AGG | - | chr3_4:39986113-39986132 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCTTCATAGACTT+AGG | + | chr3_4:39986126-39986145 | Msa0500070:CDS | 30.0% |
| GAAGCAGGTAATGATAATAT+TGG | + | chr3_4:39986341-39986360 | Msa0500070:intron | 30.0% | |
| TTATAGTGTTTGATTGTGTG+TGG | + | chr3_4:39986484-39986503 | Msa0500070:intron | 30.0% | |
| ! | GTGTGTGATATTTTCATGTT+TGG | + | chr3_4:39986518-39986537 | Msa0500070:intron | 30.0% |
| AGAATATGATCAACTACCTT+AGG | - | chr3_4:39986566-39986585 | None:intergenic | 30.0% | |
| !! | TCATATTCTGAAAGAGCATT+TGG | + | chr3_4:39986577-39986596 | Msa0500070:intron | 30.0% |
| TTGTTAAATTGTCGCCATAA+CGG | + | chr3_4:39986685-39986704 | Msa0500070:intron | 30.0% | |
| TTATACTAGATGGGGTATAA+TGG | + | chr3_4:39986974-39986993 | Msa0500070:intron | 30.0% | |
| TATGTTTGACTGCAACATTA+TGG | - | chr3_4:39987164-39987183 | None:intergenic | 30.0% | |
| AACAGTTAGAAGAAGATACA+AGG | - | chr3_4:39987362-39987381 | None:intergenic | 30.0% | |
| ! | TTTCTTTGTTTGATGGAAGA+GGG | - | chr3_4:39985857-39985876 | None:intergenic | 30.0% |
| ! | ATTTGTCATAAGTTCAGGTT+TGG | + | chr3_4:39985903-39985922 | Msa0500070:CDS | 30.0% |
| TCAGAAAATCATTCACAAGA+TGG | + | chr3_4:39986052-39986071 | Msa0500070:CDS | 30.0% | |
| CAGAAAATCATTCACAAGAT+GGG | + | chr3_4:39986053-39986072 | Msa0500070:CDS | 30.0% | |
| AGAAAATCATTCACAAGATG+GGG | + | chr3_4:39986054-39986073 | Msa0500070:CDS | 30.0% | |
| CTATGCAAGAAATACTACAA+TGG | + | chr3_4:39986077-39986096 | Msa0500070:CDS | 30.0% | |
| AAACAACACTTATCACCATA+AGG | - | chr3_4:39986113-39986132 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCTTCATAGACTT+AGG | + | chr3_4:39986126-39986145 | Msa0500070:CDS | 30.0% |
| GAAGCAGGTAATGATAATAT+TGG | + | chr3_4:39986341-39986360 | Msa0500070:intron | 30.0% | |
| TTATAGTGTTTGATTGTGTG+TGG | + | chr3_4:39986484-39986503 | Msa0500070:intron | 30.0% | |
| ! | GTGTGTGATATTTTCATGTT+TGG | + | chr3_4:39986518-39986537 | Msa0500070:intron | 30.0% |
| AGAATATGATCAACTACCTT+AGG | - | chr3_4:39986566-39986585 | None:intergenic | 30.0% | |
| !! | TCATATTCTGAAAGAGCATT+TGG | + | chr3_4:39986577-39986596 | Msa0500070:intron | 30.0% |
| TTGTTAAATTGTCGCCATAA+CGG | + | chr3_4:39986685-39986704 | Msa0500070:intron | 30.0% | |
| TTATACTAGATGGGGTATAA+TGG | + | chr3_4:39986974-39986993 | Msa0500070:intron | 30.0% | |
| TATGTTTGACTGCAACATTA+TGG | - | chr3_4:39987164-39987183 | None:intergenic | 30.0% | |
| AACAGTTAGAAGAAGATACA+AGG | - | chr3_4:39987362-39987381 | None:intergenic | 30.0% | |
| TCATGTTTCCAAAGAACAAG+AGG | + | chr3_4:39985790-39985809 | Msa0500070:CDS | 35.0% | |
| CATGTTTCCAAAGAACAAGA+GGG | + | chr3_4:39985791-39985810 | Msa0500070:CDS | 35.0% | |
| ! | GTTTCTTTGTTTGATGGAAG+AGG | - | chr3_4:39985858-39985877 | None:intergenic | 35.0% |
| CTTCCATCAAACAAAGAAAC+AGG | + | chr3_4:39985858-39985877 | Msa0500070:CDS | 35.0% | |
| CTCGTATTTGTCATAAGTTC+AGG | + | chr3_4:39985898-39985917 | Msa0500070:CDS | 35.0% | |
| TAGGTACAATGTTCACCTTT+CGG | - | chr3_4:39985936-39985955 | None:intergenic | 35.0% | |
| CAAGAAATACTACAATGGTG+AGG | + | chr3_4:39986082-39986101 | Msa0500070:CDS | 35.0% | |
| ATAGACTTAGGGATGATTCT+TGG | + | chr3_4:39986138-39986157 | Msa0500070:CDS | 35.0% | |
| TGATTCTTGGAAATCAAGAG+AGG | + | chr3_4:39986151-39986170 | Msa0500070:CDS | 35.0% | |
| !! | GATGGTTCTAATAGTTTGGA+AGG | + | chr3_4:39986203-39986222 | Msa0500070:CDS | 35.0% |
| TATGATCAACTACCTTAGGA+GGG | - | chr3_4:39986562-39986581 | None:intergenic | 35.0% | |
| ATATGATCAACTACCTTAGG+AGG | - | chr3_4:39986563-39986582 | None:intergenic | 35.0% | |
| AAAAATCTGGCATACAAGCA+TGG | - | chr3_4:39986795-39986814 | None:intergenic | 35.0% | |
| ! | ATGCTTGTATGCCAGATTTT+TGG | + | chr3_4:39986794-39986813 | Msa0500070:intron | 35.0% |
| TGTTATCATGAGTGAAAGGA+AGG | - | chr3_4:39986833-39986852 | None:intergenic | 35.0% | |
| TGACAACAGTATGTAAACCT+CGG | - | chr3_4:39986865-39986884 | None:intergenic | 35.0% | |
| AAAAACCAAGAGGAGAAACA+GGG | - | chr3_4:39987086-39987105 | None:intergenic | 35.0% | |
| AATCATCAGCAAAAACCAAG+AGG | - | chr3_4:39987096-39987115 | None:intergenic | 35.0% | |
| ACCAAATGTCTTACCAGTTT+CGG | + | chr3_4:39987393-39987412 | Msa0500070:CDS | 35.0% | |
| CTAAGAAGAAGCCTTTACTT+TGG | + | chr3_4:39987476-39987495 | Msa0500070:CDS | 35.0% | |
| TCATGTTTCCAAAGAACAAG+AGG | + | chr3_4:39985790-39985809 | Msa0500070:CDS | 35.0% | |
| CATGTTTCCAAAGAACAAGA+GGG | + | chr3_4:39985791-39985810 | Msa0500070:CDS | 35.0% | |
| ! | GTTTCTTTGTTTGATGGAAG+AGG | - | chr3_4:39985858-39985877 | None:intergenic | 35.0% |
| CTTCCATCAAACAAAGAAAC+AGG | + | chr3_4:39985858-39985877 | Msa0500070:CDS | 35.0% | |
| CTCGTATTTGTCATAAGTTC+AGG | + | chr3_4:39985898-39985917 | Msa0500070:CDS | 35.0% | |
| TAGGTACAATGTTCACCTTT+CGG | - | chr3_4:39985936-39985955 | None:intergenic | 35.0% | |
| CAAGAAATACTACAATGGTG+AGG | + | chr3_4:39986082-39986101 | Msa0500070:CDS | 35.0% | |
| ATAGACTTAGGGATGATTCT+TGG | + | chr3_4:39986138-39986157 | Msa0500070:CDS | 35.0% | |
| TGATTCTTGGAAATCAAGAG+AGG | + | chr3_4:39986151-39986170 | Msa0500070:CDS | 35.0% | |
| !! | GATGGTTCTAATAGTTTGGA+AGG | + | chr3_4:39986203-39986222 | Msa0500070:CDS | 35.0% |
| TATGATCAACTACCTTAGGA+GGG | - | chr3_4:39986562-39986581 | None:intergenic | 35.0% | |
| ATATGATCAACTACCTTAGG+AGG | - | chr3_4:39986563-39986582 | None:intergenic | 35.0% | |
| AAAAATCTGGCATACAAGCA+TGG | - | chr3_4:39986795-39986814 | None:intergenic | 35.0% | |
| ! | ATGCTTGTATGCCAGATTTT+TGG | + | chr3_4:39986794-39986813 | Msa0500070:intron | 35.0% |
| TGTTATCATGAGTGAAAGGA+AGG | - | chr3_4:39986833-39986852 | None:intergenic | 35.0% | |
| TGACAACAGTATGTAAACCT+CGG | - | chr3_4:39986865-39986884 | None:intergenic | 35.0% | |
| AAAAACCAAGAGGAGAAACA+GGG | - | chr3_4:39987086-39987105 | None:intergenic | 35.0% | |
| AATCATCAGCAAAAACCAAG+AGG | - | chr3_4:39987096-39987115 | None:intergenic | 35.0% | |
| ACCAAATGTCTTACCAGTTT+CGG | + | chr3_4:39987393-39987412 | Msa0500070:CDS | 35.0% | |
| CTAAGAAGAAGCCTTTACTT+TGG | + | chr3_4:39987476-39987495 | Msa0500070:CDS | 35.0% | |
| TTGGAAACATGATATCGCTG+TGG | - | chr3_4:39985782-39985801 | None:intergenic | 40.0% | |
| ATTCTTGCCCTCTTGTTCTT+TGG | - | chr3_4:39985801-39985820 | None:intergenic | 40.0% | |
| ! | TCGCCTGTTTCTTTGTTTGA+TGG | - | chr3_4:39985864-39985883 | None:intergenic | 40.0% |
| ! | AGGTTTGGTAATTGTCCGAA+AGG | + | chr3_4:39985918-39985937 | Msa0500070:CDS | 40.0% |
| GAACATTGTACCTATGCTCA+CGG | + | chr3_4:39985942-39985961 | Msa0500070:CDS | 40.0% | |
| AACATTGTACCTATGCTCAC+GGG | + | chr3_4:39985943-39985962 | Msa0500070:CDS | 40.0% | |
| AATGGTGAGGAATGTCCTTA+TGG | + | chr3_4:39986095-39986114 | Msa0500070:CDS | 40.0% | |
| !! | GCCTTAAGCATTGGAAGTAT+CGG | + | chr3_4:39986179-39986198 | Msa0500070:CDS | 40.0% |
| TCCGATACTTCCAATGCTTA+AGG | - | chr3_4:39986183-39986202 | None:intergenic | 40.0% | |
| !! | CGGAGATGGTTCTAATAGTT+TGG | + | chr3_4:39986199-39986218 | Msa0500070:CDS | 40.0% |
| CTAATAGTTTGGAAGGCAAC+AGG | + | chr3_4:39986210-39986229 | Msa0500070:CDS | 40.0% | |
| ATGATCAACTACCTTAGGAG+GGG | - | chr3_4:39986561-39986580 | None:intergenic | 40.0% | |
| AAAATAGCCACTGTAGCCTA+TGG | - | chr3_4:39986742-39986761 | None:intergenic | 40.0% | |
| GCAGTGTTATCATGAGTGAA+AGG | - | chr3_4:39986837-39986856 | None:intergenic | 40.0% | |
| CTGTTGTCAATTGTAGATCG+CGG | + | chr3_4:39986876-39986895 | Msa0500070:intron | 40.0% | |
| GCTATAGAATTGTTGTGCAG+CGG | - | chr3_4:39986924-39986943 | None:intergenic | 40.0% | |
| GCTGCACAACAATTCTATAG+CGG | + | chr3_4:39986923-39986942 | Msa0500070:intron | 40.0% | |
| CAAAAACCAAGAGGAGAAAC+AGG | - | chr3_4:39987087-39987106 | None:intergenic | 40.0% | |
| TAACGTTTAAGCCACAATCG+TGG | + | chr3_4:39987229-39987248 | Msa0500070:intron | 40.0% | |
| AGAAGAAGCCTTTACTTTGG+TGG | + | chr3_4:39987479-39987498 | Msa0500070:CDS | 40.0% | |
| TTGGAAACATGATATCGCTG+TGG | - | chr3_4:39985782-39985801 | None:intergenic | 40.0% | |
| ATTCTTGCCCTCTTGTTCTT+TGG | - | chr3_4:39985801-39985820 | None:intergenic | 40.0% | |
| ! | TCGCCTGTTTCTTTGTTTGA+TGG | - | chr3_4:39985864-39985883 | None:intergenic | 40.0% |
| ! | AGGTTTGGTAATTGTCCGAA+AGG | + | chr3_4:39985918-39985937 | Msa0500070:CDS | 40.0% |
| GAACATTGTACCTATGCTCA+CGG | + | chr3_4:39985942-39985961 | Msa0500070:CDS | 40.0% | |
| AACATTGTACCTATGCTCAC+GGG | + | chr3_4:39985943-39985962 | Msa0500070:CDS | 40.0% | |
| AATGGTGAGGAATGTCCTTA+TGG | + | chr3_4:39986095-39986114 | Msa0500070:CDS | 40.0% | |
| !! | GCCTTAAGCATTGGAAGTAT+CGG | + | chr3_4:39986179-39986198 | Msa0500070:CDS | 40.0% |
| TCCGATACTTCCAATGCTTA+AGG | - | chr3_4:39986183-39986202 | None:intergenic | 40.0% | |
| !! | CGGAGATGGTTCTAATAGTT+TGG | + | chr3_4:39986199-39986218 | Msa0500070:CDS | 40.0% |
| CTAATAGTTTGGAAGGCAAC+AGG | + | chr3_4:39986210-39986229 | Msa0500070:CDS | 40.0% | |
| ATGATCAACTACCTTAGGAG+GGG | - | chr3_4:39986561-39986580 | None:intergenic | 40.0% | |
| AAAATAGCCACTGTAGCCTA+TGG | - | chr3_4:39986742-39986761 | None:intergenic | 40.0% | |
| GCAGTGTTATCATGAGTGAA+AGG | - | chr3_4:39986837-39986856 | None:intergenic | 40.0% | |
| CTGTTGTCAATTGTAGATCG+CGG | + | chr3_4:39986876-39986895 | Msa0500070:intron | 40.0% | |
| GCTATAGAATTGTTGTGCAG+CGG | - | chr3_4:39986924-39986943 | None:intergenic | 40.0% | |
| GCTGCACAACAATTCTATAG+CGG | + | chr3_4:39986923-39986942 | Msa0500070:intron | 40.0% | |
| CAAAAACCAAGAGGAGAAAC+AGG | - | chr3_4:39987087-39987106 | None:intergenic | 40.0% | |
| TAACGTTTAAGCCACAATCG+TGG | + | chr3_4:39987229-39987248 | Msa0500070:intron | 40.0% | |
| AGAAGAAGCCTTTACTTTGG+TGG | + | chr3_4:39987479-39987498 | Msa0500070:CDS | 40.0% | |
| GAAACATGATATCGCTGTGG+TGG | - | chr3_4:39985779-39985798 | None:intergenic | 45.0% | |
| ACATTGTACCTATGCTCACG+GGG | + | chr3_4:39985944-39985963 | Msa0500070:CDS | 45.0% | |
| TAAGGAAGCCATTGCCGAAT+TGG | + | chr3_4:39985976-39985995 | Msa0500070:CDS | 45.0% | |
| ACTTCCAATGCTTAAGGCAC+AGG | - | chr3_4:39986177-39986196 | None:intergenic | 45.0% | |
| !! | AGCATTGGAAGTATCGGAGA+TGG | + | chr3_4:39986185-39986204 | Msa0500070:CDS | 45.0% |
| GTCTGTGAACAAGCCATCAA+GGG | + | chr3_4:39986232-39986251 | Msa0500070:CDS | 45.0% | |
| TCTGTGAACAAGCCATCAAG+GGG | + | chr3_4:39986233-39986252 | Msa0500070:CDS | 45.0% | |
| TGGGACACAGCTTAATCTTC+CGG | - | chr3_4:39986265-39986284 | None:intergenic | 45.0% | |
| TAGTGAAAGTCGTCCCCAAA+GGG | - | chr3_4:39986311-39986330 | None:intergenic | 45.0% | |
| ATAGTGAAAGTCGTCCCCAA+AGG | - | chr3_4:39986312-39986331 | None:intergenic | 45.0% | |
| GACGACTTTCACTATGCTCA+CGG | + | chr3_4:39986317-39986336 | Msa0500070:CDS | 45.0% | |
| ACATAAACTTGCCCCTCCTA+AGG | + | chr3_4:39986547-39986566 | Msa0500070:intron | 45.0% | |
| ! | ATCCAGCATGTTTCTGCCAT+AGG | + | chr3_4:39986762-39986781 | Msa0500070:intron | 45.0% |
| ATGGCAGCTAGCCAAAAATC+TGG | - | chr3_4:39986808-39986827 | None:intergenic | 45.0% | |
| CATGAGTGAAAGGAAGGCTA+TGG | - | chr3_4:39986827-39986846 | None:intergenic | 45.0% | |
| TGATAACACTGCTCTATCCG+AGG | + | chr3_4:39986845-39986864 | Msa0500070:intron | 45.0% | |
| ATGCACAACTGCAGTTGTGA+TGG | + | chr3_4:39987188-39987207 | Msa0500070:intron | 45.0% | |
| AACGTTTGCAACCACGATTG+TGG | - | chr3_4:39987243-39987262 | None:intergenic | 45.0% | |
| GCCGAAACTGGTAAGACATT+TGG | - | chr3_4:39987397-39987416 | None:intergenic | 45.0% | |
| GTTGCATCATTAGCCGAAAC+TGG | - | chr3_4:39987409-39987428 | None:intergenic | 45.0% | |
| ! | TTGCCACACCTAGACTTGTT+GGG | - | chr3_4:39987441-39987460 | None:intergenic | 45.0% |
| TTTGCCACACCTAGACTTGT+TGG | - | chr3_4:39987442-39987461 | None:intergenic | 45.0% | |
| AACAAGTCTAGGTGTGGCAA+AGG | + | chr3_4:39987441-39987460 | Msa0500070:CDS | 45.0% | |
| GAAACATGATATCGCTGTGG+TGG | - | chr3_4:39985779-39985798 | None:intergenic | 45.0% | |
| ACATTGTACCTATGCTCACG+GGG | + | chr3_4:39985944-39985963 | Msa0500070:CDS | 45.0% | |
| TAAGGAAGCCATTGCCGAAT+TGG | + | chr3_4:39985976-39985995 | Msa0500070:CDS | 45.0% | |
| ACTTCCAATGCTTAAGGCAC+AGG | - | chr3_4:39986177-39986196 | None:intergenic | 45.0% | |
| !! | AGCATTGGAAGTATCGGAGA+TGG | + | chr3_4:39986185-39986204 | Msa0500070:CDS | 45.0% |
| GTCTGTGAACAAGCCATCAA+GGG | + | chr3_4:39986232-39986251 | Msa0500070:CDS | 45.0% | |
| TCTGTGAACAAGCCATCAAG+GGG | + | chr3_4:39986233-39986252 | Msa0500070:CDS | 45.0% | |
| TGGGACACAGCTTAATCTTC+CGG | - | chr3_4:39986265-39986284 | None:intergenic | 45.0% | |
| TAGTGAAAGTCGTCCCCAAA+GGG | - | chr3_4:39986311-39986330 | None:intergenic | 45.0% | |
| ATAGTGAAAGTCGTCCCCAA+AGG | - | chr3_4:39986312-39986331 | None:intergenic | 45.0% | |
| GACGACTTTCACTATGCTCA+CGG | + | chr3_4:39986317-39986336 | Msa0500070:CDS | 45.0% | |
| ACATAAACTTGCCCCTCCTA+AGG | + | chr3_4:39986547-39986566 | Msa0500070:intron | 45.0% | |
| ! | ATCCAGCATGTTTCTGCCAT+AGG | + | chr3_4:39986762-39986781 | Msa0500070:intron | 45.0% |
| ATGGCAGCTAGCCAAAAATC+TGG | - | chr3_4:39986808-39986827 | None:intergenic | 45.0% | |
| CATGAGTGAAAGGAAGGCTA+TGG | - | chr3_4:39986827-39986846 | None:intergenic | 45.0% | |
| TGATAACACTGCTCTATCCG+AGG | + | chr3_4:39986845-39986864 | Msa0500070:intron | 45.0% | |
| ATGCACAACTGCAGTTGTGA+TGG | + | chr3_4:39987188-39987207 | Msa0500070:intron | 45.0% | |
| AACGTTTGCAACCACGATTG+TGG | - | chr3_4:39987243-39987262 | None:intergenic | 45.0% | |
| GCCGAAACTGGTAAGACATT+TGG | - | chr3_4:39987397-39987416 | None:intergenic | 45.0% | |
| GTTGCATCATTAGCCGAAAC+TGG | - | chr3_4:39987409-39987428 | None:intergenic | 45.0% | |
| ! | TTGCCACACCTAGACTTGTT+GGG | - | chr3_4:39987441-39987460 | None:intergenic | 45.0% |
| TTTGCCACACCTAGACTTGT+TGG | - | chr3_4:39987442-39987461 | None:intergenic | 45.0% | |
| AACAAGTCTAGGTGTGGCAA+AGG | + | chr3_4:39987441-39987460 | Msa0500070:CDS | 45.0% | |
| ATGATATCGCTGTGGTGGTC+TGG | - | chr3_4:39985774-39985793 | None:intergenic | 50.0% | |
| GAAGCCATTGCCGAATTGGA+AGG | + | chr3_4:39985980-39985999 | Msa0500070:CDS | 50.0% | |
| AGCTCCTTCCAATTCGGCAA+TGG | - | chr3_4:39985987-39986006 | None:intergenic | 50.0% | |
| CCAGCTAGCTCCTTCCAATT+CGG | - | chr3_4:39985993-39986012 | None:intergenic | 50.0% | |
| CAAGGAATGGATGCAGTGTC+TGG | + | chr3_4:39986022-39986041 | Msa0500070:CDS | 50.0% | |
| GGTCTGTGAACAAGCCATCA+AGG | + | chr3_4:39986231-39986250 | Msa0500070:CDS | 50.0% | |
| AGATTAAGCTGTGTCCCACG+TGG | + | chr3_4:39986267-39986286 | Msa0500070:CDS | 50.0% | |
| ATAGCCACTGTAGCCTATGG+TGG | - | chr3_4:39986739-39986758 | None:intergenic | 50.0% | |
| ! | TGGCATACAAGCATGGACTG+TGG | - | chr3_4:39986788-39986807 | None:intergenic | 50.0% |
| ! | TTCCACCCTGTTTCTCCTCT+TGG | + | chr3_4:39987078-39987097 | Msa0500070:intron | 50.0% |
| AACCAAGAGGAGAAACAGGG+TGG | - | chr3_4:39987083-39987102 | None:intergenic | 50.0% | |
| CACAACTGCAGTTGTGATGG+TGG | + | chr3_4:39987191-39987210 | Msa0500070:intron | 50.0% | |
| ACCAGCATCCCAACAAGTCT+AGG | + | chr3_4:39987430-39987449 | Msa0500070:CDS | 50.0% | |
| !! | ACCTAGACTTGTTGGGATGC+TGG | - | chr3_4:39987434-39987453 | None:intergenic | 50.0% |
| CATCCCAACAAGTCTAGGTG+TGG | + | chr3_4:39987435-39987454 | Msa0500070:CDS | 50.0% | |
| TCTAGGTGTGGCAAAGGAAG+TGG | + | chr3_4:39987447-39987466 | Msa0500070:CDS | 50.0% | |
| ATGATATCGCTGTGGTGGTC+TGG | - | chr3_4:39985774-39985793 | None:intergenic | 50.0% | |
| GAAGCCATTGCCGAATTGGA+AGG | + | chr3_4:39985980-39985999 | Msa0500070:CDS | 50.0% | |
| AGCTCCTTCCAATTCGGCAA+TGG | - | chr3_4:39985987-39986006 | None:intergenic | 50.0% | |
| CCAGCTAGCTCCTTCCAATT+CGG | - | chr3_4:39985993-39986012 | None:intergenic | 50.0% | |
| CAAGGAATGGATGCAGTGTC+TGG | + | chr3_4:39986022-39986041 | Msa0500070:CDS | 50.0% | |
| GGTCTGTGAACAAGCCATCA+AGG | + | chr3_4:39986231-39986250 | Msa0500070:CDS | 50.0% | |
| AGATTAAGCTGTGTCCCACG+TGG | + | chr3_4:39986267-39986286 | Msa0500070:CDS | 50.0% | |
| ATAGCCACTGTAGCCTATGG+TGG | - | chr3_4:39986739-39986758 | None:intergenic | 50.0% | |
| ! | TGGCATACAAGCATGGACTG+TGG | - | chr3_4:39986788-39986807 | None:intergenic | 50.0% |
| ! | TTCCACCCTGTTTCTCCTCT+TGG | + | chr3_4:39987078-39987097 | Msa0500070:intron | 50.0% |
| AACCAAGAGGAGAAACAGGG+TGG | - | chr3_4:39987083-39987102 | None:intergenic | 50.0% | |
| CACAACTGCAGTTGTGATGG+TGG | + | chr3_4:39987191-39987210 | Msa0500070:intron | 50.0% | |
| ACCAGCATCCCAACAAGTCT+AGG | + | chr3_4:39987430-39987449 | Msa0500070:CDS | 50.0% | |
| !! | ACCTAGACTTGTTGGGATGC+TGG | - | chr3_4:39987434-39987453 | None:intergenic | 50.0% |
| CATCCCAACAAGTCTAGGTG+TGG | + | chr3_4:39987435-39987454 | Msa0500070:CDS | 50.0% | |
| TCTAGGTGTGGCAAAGGAAG+TGG | + | chr3_4:39987447-39987466 | Msa0500070:CDS | 50.0% | |
| TGTACCTATGCTCACGGGGT+TGG | + | chr3_4:39985948-39985967 | Msa0500070:CDS | 55.0% | |
| !! | CTCACGGGGTTGGTGAGATA+AGG | + | chr3_4:39985958-39985977 | Msa0500070:CDS | 55.0% |
| CCGAATTGGAAGGAGCTAGC+TGG | + | chr3_4:39985990-39986009 | Msa0500070:CDS | 55.0% | |
| GAGGCCTGTGCCTTAAGCAT+TGG | + | chr3_4:39986170-39986189 | Msa0500070:CDS | 55.0% | |
| !! | AGCCATCAAGGGGCACTTAC+CGG | + | chr3_4:39986243-39986262 | Msa0500070:CDS | 55.0% |
| TTCCGGTAAGTGCCCCTTGA+TGG | - | chr3_4:39986248-39986267 | None:intergenic | 55.0% | |
| !! | AAACAGGGCGCTGTCCCTTT+GGG | + | chr3_4:39986294-39986313 | Msa0500070:CDS | 55.0% |
| CACTATGCTCACGGAGAAGC+AGG | + | chr3_4:39986326-39986345 | Msa0500070:CDS | 55.0% | |
| TTGTCGCCATAACGGCACCA+AGG | + | chr3_4:39986693-39986712 | Msa0500070:intron | 55.0% | |
| !! | TCCATGCCTTGGTGCCGTTA+TGG | - | chr3_4:39986702-39986721 | None:intergenic | 55.0% |
| ATAACGGCACCAAGGCATGG+AGG | + | chr3_4:39986701-39986720 | Msa0500070:intron | 55.0% | |
| GCACAACATCCTCCATGCCT+TGG | - | chr3_4:39986713-39986732 | None:intergenic | 55.0% | |
| GATGTTGTGCCAGCCACCAT+AGG | + | chr3_4:39986723-39986742 | Msa0500070:intron | 55.0% | |
| GGCCTATGGCAGAAACATGC+TGG | - | chr3_4:39986767-39986786 | None:intergenic | 55.0% | |
| ! | CAAGCATGGACTGTGGCCTA+TGG | - | chr3_4:39986781-39986800 | None:intergenic | 55.0% |
| TGTACCTATGCTCACGGGGT+TGG | + | chr3_4:39985948-39985967 | Msa0500070:CDS | 55.0% | |
| !! | CTCACGGGGTTGGTGAGATA+AGG | + | chr3_4:39985958-39985977 | Msa0500070:CDS | 55.0% |
| CCGAATTGGAAGGAGCTAGC+TGG | + | chr3_4:39985990-39986009 | Msa0500070:CDS | 55.0% | |
| GAGGCCTGTGCCTTAAGCAT+TGG | + | chr3_4:39986170-39986189 | Msa0500070:CDS | 55.0% | |
| !! | AGCCATCAAGGGGCACTTAC+CGG | + | chr3_4:39986243-39986262 | Msa0500070:CDS | 55.0% |
| TTCCGGTAAGTGCCCCTTGA+TGG | - | chr3_4:39986248-39986267 | None:intergenic | 55.0% | |
| !! | AAACAGGGCGCTGTCCCTTT+GGG | + | chr3_4:39986294-39986313 | Msa0500070:CDS | 55.0% |
| CACTATGCTCACGGAGAAGC+AGG | + | chr3_4:39986326-39986345 | Msa0500070:CDS | 55.0% | |
| TTGTCGCCATAACGGCACCA+AGG | + | chr3_4:39986693-39986712 | Msa0500070:intron | 55.0% | |
| !! | TCCATGCCTTGGTGCCGTTA+TGG | - | chr3_4:39986702-39986721 | None:intergenic | 55.0% |
| ATAACGGCACCAAGGCATGG+AGG | + | chr3_4:39986701-39986720 | Msa0500070:intron | 55.0% | |
| GCACAACATCCTCCATGCCT+TGG | - | chr3_4:39986713-39986732 | None:intergenic | 55.0% | |
| GATGTTGTGCCAGCCACCAT+AGG | + | chr3_4:39986723-39986742 | Msa0500070:intron | 55.0% | |
| GGCCTATGGCAGAAACATGC+TGG | - | chr3_4:39986767-39986786 | None:intergenic | 55.0% | |
| ! | CAAGCATGGACTGTGGCCTA+TGG | - | chr3_4:39986781-39986800 | None:intergenic | 55.0% |
| CTCACCAACCCCGTGAGCAT+AGG | - | chr3_4:39985955-39985974 | None:intergenic | 60.0% | |
| ! | CTGGCTCTCGCAGCAAGGAA+TGG | + | chr3_4:39986009-39986028 | Msa0500070:CDS | 60.0% |
| TGTCCCACGTGGCAGCAAAC+AGG | + | chr3_4:39986278-39986297 | Msa0500070:CDS | 60.0% | |
| GTCCCACGTGGCAGCAAACA+GGG | + | chr3_4:39986279-39986298 | Msa0500070:CDS | 60.0% | |
| !! | CAAACAGGGCGCTGTCCCTT+TGG | + | chr3_4:39986293-39986312 | Msa0500070:CDS | 60.0% |
| !! | AACAGGGCGCTGTCCCTTTG+GGG | + | chr3_4:39986295-39986314 | Msa0500070:CDS | 60.0% |
| GCCATAACGGCACCAAGGCA+TGG | + | chr3_4:39986698-39986717 | Msa0500070:intron | 60.0% | |
| CCACTGTAGCCTATGGTGGC+TGG | - | chr3_4:39986735-39986754 | None:intergenic | 60.0% | |
| CCAGCCACCATAGGCTACAG+TGG | + | chr3_4:39986732-39986751 | Msa0500070:intron | 60.0% | |
| CTCACCAACCCCGTGAGCAT+AGG | - | chr3_4:39985955-39985974 | None:intergenic | 60.0% | |
| ! | CTGGCTCTCGCAGCAAGGAA+TGG | + | chr3_4:39986009-39986028 | Msa0500070:CDS | 60.0% |
| TGTCCCACGTGGCAGCAAAC+AGG | + | chr3_4:39986278-39986297 | Msa0500070:CDS | 60.0% | |
| GTCCCACGTGGCAGCAAACA+GGG | + | chr3_4:39986279-39986298 | Msa0500070:CDS | 60.0% | |
| !! | CAAACAGGGCGCTGTCCCTT+TGG | + | chr3_4:39986293-39986312 | Msa0500070:CDS | 60.0% |
| !! | AACAGGGCGCTGTCCCTTTG+GGG | + | chr3_4:39986295-39986314 | Msa0500070:CDS | 60.0% |
| GCCATAACGGCACCAAGGCA+TGG | + | chr3_4:39986698-39986717 | Msa0500070:intron | 60.0% | |
| CCACTGTAGCCTATGGTGGC+TGG | - | chr3_4:39986735-39986754 | None:intergenic | 60.0% | |
| CCAGCCACCATAGGCTACAG+TGG | + | chr3_4:39986732-39986751 | Msa0500070:intron | 60.0% | |
| ! | GCTAGCTGGCTCTCGCAGCA+AGG | + | chr3_4:39986004-39986023 | Msa0500070:CDS | 65.0% |
| ! | CGCCCTGTTTGCTGCCACGT+GGG | - | chr3_4:39986284-39986303 | None:intergenic | 65.0% |
| ! | GCTAGCTGGCTCTCGCAGCA+AGG | + | chr3_4:39986004-39986023 | Msa0500070:CDS | 65.0% |
| ! | CGCCCTGTTTGCTGCCACGT+GGG | - | chr3_4:39986284-39986303 | None:intergenic | 65.0% |
| ! | GCGCCCTGTTTGCTGCCACG+TGG | - | chr3_4:39986285-39986304 | None:intergenic | 70.0% |
| ! | GCGCCCTGTTTGCTGCCACG+TGG | - | chr3_4:39986285-39986304 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 39985762 | 39987573 | 39985762 | ID=Msa0500070;Name=Msa0500070 |
| chr3_4 | mRNA | 39985762 | 39987573 | 39985762 | ID=Msa0500070-mRNA-1;Parent=Msa0500070;Name=Msa0500070-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|2|0|257 |
| chr3_4 | exon | 39985762 | 39986347 | 39985762 | ID=Msa0500070-mRNA-1:exon:8163;Parent=Msa0500070-mRNA-1 |
| chr3_4 | exon | 39987386 | 39987573 | 39987386 | ID=Msa0500070-mRNA-1:exon:8164;Parent=Msa0500070-mRNA-1 |
| chr3_4 | CDS | 39985762 | 39986347 | 39985762 | ID=Msa0500070-mRNA-1:cds;Parent=Msa0500070-mRNA-1 |
| chr3_4 | CDS | 39987386 | 39987573 | 39987386 | ID=Msa0500070-mRNA-1:cds;Parent=Msa0500070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
