Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501740 | XP_013459842.1 | 96.838 | 253 | 6 | 1 | 21 | 271 | 2 | 254 | 7.89e-172 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501740 | sp|Q5PQL2|CNOT9_RAT | 75.664 | 226 | 55 | 0 | 44 | 269 | 24 | 249 | 2.35e-122 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501740 | A0A072UXT2 | 96.838 | 253 | 6 | 1 | 21 | 271 | 2 | 254 | 3.77e-172 | 487 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0501740 | TR | Rcd1-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501740 | MtrunA17_Chr3g0099561 | 96.838 | 253 | 6 | 1 | 21 | 271 | 2 | 254 | 7.25e-176 | 487 |
| Msa0501740 | MtrunA17_Chr1g0177151 | 62.992 | 254 | 92 | 1 | 9 | 262 | 2 | 253 | 7.56e-108 | 313 |
| Msa0501740 | MtrunA17_Chr8g0392781 | 56.794 | 287 | 87 | 2 | 16 | 265 | 8 | 294 | 4.16e-99 | 294 |
| Msa0501740 | MtrunA17_Chr7g0224601 | 64.602 | 226 | 76 | 2 | 43 | 264 | 28 | 253 | 4.33e-93 | 277 |
| Msa0501740 | MtrunA17_Chr6g0477171 | 65.534 | 206 | 71 | 0 | 64 | 269 | 45 | 250 | 4.07e-90 | 268 |
| Msa0501740 | MtrunA17_Chr5g0444621 | 54.464 | 224 | 102 | 0 | 48 | 271 | 25 | 248 | 3.96e-76 | 233 |
| Msa0501740 | MtrunA17_Chr3g0083821 | 57.377 | 122 | 44 | 2 | 62 | 179 | 13 | 130 | 1.62e-38 | 131 |
| Msa0501740 | MtrunA17_Chr3g0083811 | 55.405 | 74 | 33 | 0 | 191 | 264 | 1 | 74 | 5.18e-19 | 80.5 |
| Msa0501740 | MtrunA17_Chr5g0444631 | 66.038 | 53 | 18 | 0 | 117 | 169 | 4 | 56 | 7.51e-18 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501740 | AT3G20800.1 | 83.774 | 265 | 40 | 1 | 10 | 271 | 3 | 267 | 2.19e-155 | 436 |
| Msa0501740 | AT5G12980.1 | 82.278 | 237 | 42 | 0 | 35 | 271 | 27 | 263 | 1.91e-143 | 405 |
| Msa0501740 | AT2G32550.2 | 34.632 | 231 | 141 | 5 | 44 | 264 | 51 | 281 | 4.29e-36 | 131 |
| Msa0501740 | AT2G32550.3 | 35.407 | 209 | 127 | 4 | 64 | 264 | 34 | 242 | 1.66e-34 | 126 |
| Msa0501740 | AT2G32550.1 | 35.294 | 187 | 113 | 4 | 86 | 264 | 1 | 187 | 2.94e-29 | 111 |
Find 77 sgRNAs with CRISPR-Local
Find 458 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGCTGTTGGTCGAGTTCT+TGG | 0.255938 | 3_4:-43255908 | Msa0501740:CDS |
| CGCTCTTCTCGAACTCTCTA+AGG | 0.260230 | 3_4:-43262287 | Msa0501740:intron |
| AGGAATAGCATCCTTGTATC+AGG | 0.295510 | 3_4:+43258228 | None:intergenic |
| TCGATTTGCTTGTTGTGTTC+AGG | 0.306285 | 3_4:+43257253 | None:intergenic |
| TGCAGCCACTTCCTAGTTGT+TGG | 0.322430 | 3_4:+43254921 | None:intergenic |
| TCCCCTGTGCCTGCGCACTA+TGG | 0.322674 | 3_4:-43256766 | Msa0501740:CDS |
| AATCAGTACACTCACCGTTT+TGG | 0.342035 | 3_4:+43256725 | None:intergenic |
| AGAAAGTAACATTACCATTC+AGG | 0.352299 | 3_4:+43258208 | None:intergenic |
| TTCACAATGTTGGAGGGAAT+CGG | 0.370583 | 3_4:-43254890 | Msa0501740:three_prime_UTR |
| GGTGAATTGAGTATAAACTA+TGG | 0.374597 | 3_4:-43254826 | Msa0501740:three_prime_UTR |
| GCAGCCACTTCCTAGTTGTT+GGG | 0.391810 | 3_4:+43254922 | None:intergenic |
| CCATTGCTATGGAATTCATT+TGG | 0.393527 | 3_4:-43259729 | Msa0501740:CDS |
| AACAACAACTCTTCTTCATT+CGG | 0.406492 | 3_4:-43262400 | Msa0501740:CDS |
| TCTGTTGGACGATGTGGGCT+TGG | 0.408114 | 3_4:-43255960 | Msa0501740:CDS |
| GATTGTGCTGGAGTGAGGTT+GGG | 0.411334 | 3_4:+43258779 | None:intergenic |
| TGATTGTGCTGGAGTGAGGT+TGG | 0.420676 | 3_4:+43258778 | None:intergenic |
| GTGCCTGCGCACTATGGAGA+TGG | 0.431875 | 3_4:-43256760 | Msa0501740:CDS |
| CATAGAAGAAGACACGGATT+GGG | 0.432929 | 3_4:+43262423 | None:intergenic |
| CCTCCTCCACCTTGCAGTGC+AGG | 0.438234 | 3_4:+43254864 | None:intergenic |
| CACACTCGATTTGATTGTGC+TGG | 0.438779 | 3_4:+43258767 | None:intergenic |
| TACTTGAGGCTTACTAGTCT+TGG | 0.443121 | 3_4:-43257219 | Msa0501740:CDS |
| TCACAATGTTGGAGGGAATC+GGG | 0.446766 | 3_4:-43254889 | Msa0501740:three_prime_UTR |
| CAAATGAATTCCATAGCAAT+GGG | 0.448741 | 3_4:+43259730 | None:intergenic |
| CAATGCTCTTGCCCTGCTCC+AGG | 0.456652 | 3_4:-43258744 | Msa0501740:intron |
| TACTATTGCAGCACTTCTGC+AGG | 0.460816 | 3_4:-43259706 | Msa0501740:intron |
| TCTCCATAGTGCGCAGGCAC+AGG | 0.464066 | 3_4:+43256763 | None:intergenic |
| CCTGCACTGCAAGGTGGAGG+AGG | 0.475249 | 3_4:-43254864 | Msa0501740:three_prime_UTR |
| TCCCGCTTCTTCCAACTCGA+TGG | 0.477236 | 3_4:-43262362 | Msa0501740:CDS |
| AAGATCTAGCCCCATTGCTA+TGG | 0.486924 | 3_4:-43259740 | Msa0501740:CDS |
| TCATAGAAGAAGACACGGAT+TGG | 0.492314 | 3_4:+43262422 | None:intergenic |
| GTAAGCCTCAAGTACTCAAA+AGG | 0.495117 | 3_4:+43257228 | None:intergenic |
| TATTGTTCAAAAGATTCTGT+TGG | 0.498326 | 3_4:-43255975 | Msa0501740:CDS |
| AGGTTGGGAGGAGACAAAAC+AGG | 0.502280 | 3_4:+43258794 | None:intergenic |
| AAAGATTCTGTTGGACGATG+TGG | 0.506606 | 3_4:-43255966 | Msa0501740:CDS |
| TGCCTGCGCACTATGGAGAT+GGG | 0.509168 | 3_4:-43256759 | Msa0501740:CDS |
| AAACTCATCTAACCTGGAGC+AGG | 0.510559 | 3_4:+43258732 | None:intergenic |
| GTTCCTGCACTGCAAGGTGG+AGG | 0.514765 | 3_4:-43254867 | Msa0501740:three_prime_UTR |
| CAACAACTGATTCACAATGT+TGG | 0.517621 | 3_4:-43254900 | Msa0501740:exon |
| CCAAATGAATTCCATAGCAA+TGG | 0.523846 | 3_4:+43259729 | None:intergenic |
| AGCCATCGAGTTGGAAGAAG+CGG | 0.531152 | 3_4:+43262360 | None:intergenic |
| TTGGAAGAAGCGGGAGAAGG+AGG | 0.534762 | 3_4:+43262370 | None:intergenic |
| TTGCTTGTTGTGTTCAGGAA+CGG | 0.537424 | 3_4:+43257258 | None:intergenic |
| CTCCATAGTGCGCAGGCACA+GGG | 0.541034 | 3_4:+43256764 | None:intergenic |
| CTTACTAGTCTTGGTGTCAT+CGG | 0.543029 | 3_4:-43257210 | Msa0501740:CDS |
| TAGCATCTCACCCTGATACA+AGG | 0.553761 | 3_4:-43258239 | Msa0501740:CDS |
| ACAAGGATGCTATTCCTGAA+TGG | 0.556336 | 3_4:-43258222 | Msa0501740:intron |
| GCCATCGAGTTGGAAGAAGC+GGG | 0.561952 | 3_4:+43262361 | None:intergenic |
| AAGATTCTGTTGGACGATGT+GGG | 0.563510 | 3_4:-43255965 | Msa0501740:CDS |
| TGCTTCAACAGACGAGATGA+TGG | 0.564466 | 3_4:+43255857 | None:intergenic |
| GAGTTGGAAGAAGCGGGAGA+AGG | 0.571715 | 3_4:+43262367 | None:intergenic |
| TCCCCATCTCCATAGTGCGC+AGG | 0.574764 | 3_4:+43256757 | None:intergenic |
| AACTGATTCACAATGTTGGA+GGG | 0.575243 | 3_4:-43254896 | Msa0501740:exon |
| TTCAGAAGAAGCCATCGAGT+TGG | 0.578031 | 3_4:+43262351 | None:intergenic |
| CAACTGATTCACAATGTTGG+AGG | 0.581651 | 3_4:-43254897 | Msa0501740:exon |
| GGGGAGTGAGCTCTCCAAAA+CGG | 0.584451 | 3_4:-43256739 | Msa0501740:intron |
| TTCAGGAGGACCCAACAACT+AGG | 0.584464 | 3_4:-43254932 | Msa0501740:intron |
| AGGACCCAACAACTAGGAAG+TGG | 0.596471 | 3_4:-43254926 | Msa0501740:CDS |
| ATAGAAGAAGACACGGATTG+GGG | 0.603072 | 3_4:+43262424 | None:intergenic |
| AATCGGGTTCCTGCACTGCA+AGG | 0.603945 | 3_4:-43254873 | Msa0501740:three_prime_UTR |
| TGTGCTGGAGTGAGGTTGGG+AGG | 0.609651 | 3_4:+43258782 | None:intergenic |
| TGGTCGAGTTCTTGGAAACA+TGG | 0.623015 | 3_4:-43255900 | Msa0501740:CDS |
| GATTTGATTGTGCTGGAGTG+AGG | 0.624347 | 3_4:+43258774 | None:intergenic |
| AACTCATCTAACCTGGAGCA+GGG | 0.624665 | 3_4:+43258733 | None:intergenic |
| GGAATAGCATCCTTGTATCA+GGG | 0.625986 | 3_4:+43258229 | None:intergenic |
| TTCGTCTGTCAGATAACCCG+AGG | 0.629082 | 3_4:-43255817 | Msa0501740:intron |
| GCCTGCGCACTATGGAGATG+GGG | 0.643265 | 3_4:-43256758 | Msa0501740:CDS |
| CGGGTTCCTGCACTGCAAGG+TGG | 0.654150 | 3_4:-43254870 | Msa0501740:three_prime_UTR |
| TGTCATCGGTGCATTAGTGA+AGG | 0.655115 | 3_4:-43257196 | Msa0501740:intron |
| GTTGTTCATAGAAGAAGACA+CGG | 0.656261 | 3_4:+43262417 | None:intergenic |
| TCCATAGTGCGCAGGCACAG+GGG | 0.677780 | 3_4:+43256765 | None:intergenic |
| TTTAGTACACAAATACACAA+TGG | 0.678480 | 3_4:+43254737 | None:intergenic |
| TCACCAGGTTGATGATACTG+AGG | 0.679946 | 3_4:-43256820 | Msa0501740:intron |
| TAGAAGAAGACACGGATTGG+GGG | 0.694498 | 3_4:+43262425 | None:intergenic |
| TCGAGTTCTTGGAAACATGG+TGG | 0.707168 | 3_4:-43255897 | Msa0501740:CDS |
| GGTTGGGAGGAGACAAAACA+GGG | 0.710997 | 3_4:+43258795 | None:intergenic |
| AGGAACGGATACAAATACAG+AGG | 0.734864 | 3_4:+43257273 | None:intergenic |
| AAATGAATTCCATAGCAATG+GGG | 0.741455 | 3_4:+43259731 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTAATCATTATTTTTTAA+TGG | - | chr3_4:43257195-43257214 | Msa0501740:intron | 10.0% |
| !! | ATATTCAATATAAAAAGAAA+AGG | + | chr3_4:43259715-43259734 | None:intergenic | 10.0% |
| !!! | TTCTTTTTATATTGAATATA+AGG | - | chr3_4:43259716-43259735 | Msa0501740:CDS | 10.0% |
| !! | AACAAAAAAAAAAAAAATAG+AGG | + | chr3_4:43260162-43260181 | None:intergenic | 10.0% |
| !!! | AAATTATTGAATACAATTTT+TGG | - | chr3_4:43260970-43260989 | Msa0501740:intron | 10.0% |
| !!! | ACTTAATTTATTTTTTTGAC+TGG | - | chr3_4:43255824-43255843 | Msa0501740:CDS | 15.0% |
| !!! | ATTTGTATTTTTCTTTAAGA+AGG | + | chr3_4:43256153-43256172 | None:intergenic | 15.0% |
| !! | TAAAGGAAAATAGATTAAAA+TGG | - | chr3_4:43256345-43256364 | Msa0501740:intron | 15.0% |
| !! | TAATTATCAAATTTCAAAGT+TGG | + | chr3_4:43258049-43258068 | None:intergenic | 15.0% |
| !! | AAAACTGTAAATCTAAAAAT+TGG | - | chr3_4:43258110-43258129 | Msa0501740:intron | 15.0% |
| !!! | TTGATATTTTATTTTCTTTC+AGG | - | chr3_4:43258292-43258311 | Msa0501740:intron | 15.0% |
| !! | AATATCTTAGTAAAATTTCA+AGG | - | chr3_4:43258524-43258543 | Msa0501740:intron | 15.0% |
| !!! | ACTAAAAAGTATAATATCTA+TGG | + | chr3_4:43258762-43258781 | None:intergenic | 15.0% |
| !! | AAAGAATGATCAAATTAAAA+GGG | + | chr3_4:43259308-43259327 | None:intergenic | 15.0% |
| !! | AAAAGAATGATCAAATTAAA+AGG | + | chr3_4:43259309-43259328 | None:intergenic | 15.0% |
| !!! | TTAAATACTATTTTGTCATT+AGG | - | chr3_4:43260945-43260964 | Msa0501740:intron | 15.0% |
| !! | TTATCTCATATACATTAATA+GGG | + | chr3_4:43261074-43261093 | None:intergenic | 15.0% |
| !! | ATTATCTCATATACATTAAT+AGG | + | chr3_4:43261075-43261094 | None:intergenic | 15.0% |
| !!! | TAACAATTTATTAGTTTTCT+TGG | + | chr3_4:43261711-43261730 | None:intergenic | 15.0% |
| !! | ATAAATAGTTTAGATATTGT+AGG | + | chr3_4:43261759-43261778 | None:intergenic | 15.0% |
| !! | CACGTATTTAAACAATTAAA+TGG | + | chr3_4:43254943-43254962 | None:intergenic | 20.0% |
| !! | AATTGTTTAAATACGTGATT+AGG | - | chr3_4:43254946-43254965 | Msa0501740:intron | 20.0% |
| !! | ATTGTTTAAATACGTGATTA+GGG | - | chr3_4:43254947-43254966 | Msa0501740:intron | 20.0% |
| !!! | TTGATTACTGATTTAGTTTT+TGG | - | chr3_4:43255563-43255582 | Msa0501740:intron | 20.0% |
| !!! | TTTTCCTTTTGTTGAAATTA+GGG | - | chr3_4:43255668-43255687 | Msa0501740:intron | 20.0% |
| !! | ATCGTAATTCTGAATAAATT+AGG | + | chr3_4:43255857-43255876 | None:intergenic | 20.0% |
| !! | ATTTATTCAGAATTACGATA+TGG | - | chr3_4:43255858-43255877 | Msa0501740:CDS | 20.0% |
| !! | GAAAAATACAAATATCCAAT+CGG | - | chr3_4:43256160-43256179 | Msa0501740:intron | 20.0% |
| !!! | TAATCTATTTTCCTTTAAGA+AGG | + | chr3_4:43256342-43256361 | None:intergenic | 20.0% |
| !!! | ATCTGGTATTCTAAAATAAA+GGG | + | chr3_4:43256672-43256691 | None:intergenic | 20.0% |
| !!! | AATCTGGTATTCTAAAATAA+AGG | + | chr3_4:43256673-43256692 | None:intergenic | 20.0% |
| !! | TTTATATGTGTATCATACTA+TGG | - | chr3_4:43257781-43257800 | Msa0501740:intron | 20.0% |
| !! | GTTATTCACAAACAAATAAA+AGG | + | chr3_4:43258432-43258451 | None:intergenic | 20.0% |
| !! | GTGTTCTTAAAAATTAAAGT+TGG | - | chr3_4:43259025-43259044 | Msa0501740:intron | 20.0% |
| !! | AACTTTCTCCTATTATTTAA+AGG | - | chr3_4:43259553-43259572 | Msa0501740:intron | 20.0% |
| !! | AAAAAAATTCAAAAGCAACA+AGG | + | chr3_4:43259624-43259643 | None:intergenic | 20.0% |
| !! | TTAGTTAAAGATAGTTCATA+AGG | - | chr3_4:43259775-43259794 | Msa0501740:intron | 20.0% |
| !!! | TCAATATGTTATTTGAGTAA+TGG | - | chr3_4:43260903-43260922 | Msa0501740:intron | 20.0% |
| !!! | GGAGTAATTTTTAATCAATT+AGG | - | chr3_4:43261919-43261938 | Msa0501740:intron | 20.0% |
| !!! | TTGTTTACGATACTTATTTT+TGG | - | chr3_4:43262162-43262181 | Msa0501740:intron | 20.0% |
| !!! | ATTTTTGGTTTTGTTTATTC+AGG | - | chr3_4:43262177-43262196 | Msa0501740:intron | 20.0% |
| !!! | TGTGTACTAAAACTATATTT+TGG | - | chr3_4:43262401-43262420 | Msa0501740:CDS | 20.0% |
| !!! | GTTTTGAGTTTGAAAGAAAA+AGG | + | chr3_4:43254906-43254925 | None:intergenic | 25.0% |
| ! | ATGTTACACTGTTTATGATT+AGG | - | chr3_4:43255237-43255256 | Msa0501740:intron | 25.0% |
| ! | TGTTACACTGTTTATGATTA+GGG | - | chr3_4:43255238-43255257 | Msa0501740:intron | 25.0% |
| !!! | GGTTTTGTTAGTTAATTGTT+GGG | - | chr3_4:43255259-43255278 | Msa0501740:intron | 25.0% |
| !! | TTATAGTGTGATCAATTTTG+TGG | - | chr3_4:43255593-43255612 | Msa0501740:intron | 25.0% |
| !! | TATAGTGTGATCAATTTTGT+GGG | - | chr3_4:43255594-43255613 | Msa0501740:intron | 25.0% |
| !! | GTTTTCCTTTTGTTGAAATT+AGG | - | chr3_4:43255667-43255686 | Msa0501740:intron | 25.0% |
| !! | TTGTAATTTTGAACGTGATT+AGG | - | chr3_4:43256109-43256128 | Msa0501740:intron | 25.0% |
| !! | ACAAAAGTACACACAATAAA+GGG | + | chr3_4:43256282-43256301 | None:intergenic | 25.0% |
| !!! | ACAGTTGATATTTTCTGTTT+CGG | + | chr3_4:43256487-43256506 | None:intergenic | 25.0% |
| !!! | ATTCTAAAATAAAGGGGAAA+TGG | + | chr3_4:43256665-43256684 | None:intergenic | 25.0% |
| !!! | TCTGGTATTCTAAAATAAAG+GGG | + | chr3_4:43256671-43256690 | None:intergenic | 25.0% |
| !!! | AATTTGTTGAAACTCTAATC+TGG | + | chr3_4:43256689-43256708 | None:intergenic | 25.0% |
| ! | GATTAGAGTTTCAACAAATT+TGG | - | chr3_4:43256689-43256708 | Msa0501740:intron | 25.0% |
| !!! | ACTTTTTTTTTGTTAATGCG+CGG | - | chr3_4:43256826-43256845 | Msa0501740:intron | 25.0% |
| ! | GGTAAAAATTGTAACAACAA+AGG | + | chr3_4:43257048-43257067 | None:intergenic | 25.0% |
| ! | TTTCTTCCTTATGTTGAATT+TGG | - | chr3_4:43257159-43257178 | Msa0501740:intron | 25.0% |
| ! | TTCTTCCTTATGTTGAATTT+GGG | - | chr3_4:43257160-43257179 | Msa0501740:intron | 25.0% |
| !! | TGTTTTATGTATTGTAGAAG+AGG | - | chr3_4:43257353-43257372 | Msa0501740:intron | 25.0% |
| !! | GTTTTATGTATTGTAGAAGA+GGG | - | chr3_4:43257354-43257373 | Msa0501740:intron | 25.0% |
| ! | CTCAAAAATGAAAATCAACA+GGG | + | chr3_4:43257539-43257558 | None:intergenic | 25.0% |
| ! | ACTCAAAAATGAAAATCAAC+AGG | + | chr3_4:43257540-43257559 | None:intergenic | 25.0% |
| !! | CTATAAATTGAAGGCATATT+TGG | + | chr3_4:43257612-43257631 | None:intergenic | 25.0% |
| ! | AAGTTTCAAAAGAAACGAAA+GGG | + | chr3_4:43257648-43257667 | None:intergenic | 25.0% |
| ! | AAAGTTTCAAAAGAAACGAA+AGG | + | chr3_4:43257649-43257668 | None:intergenic | 25.0% |
| !!! | TCGTTTCTTTTGAAACTTTT+TGG | - | chr3_4:43257650-43257669 | Msa0501740:intron | 25.0% |
| ! | TTTGAATGTGTAAGATACTA+TGG | - | chr3_4:43257741-43257760 | Msa0501740:intron | 25.0% |
| !! | TTTTCCAAACTTTAATGTAG+CGG | - | chr3_4:43257823-43257842 | Msa0501740:intron | 25.0% |
| ! | GCAAATATTTATGTTGTCAA+TGG | + | chr3_4:43257919-43257938 | None:intergenic | 25.0% |
| !!! | GCTTAGTTTTGAATATATTG+TGG | - | chr3_4:43257937-43257956 | Msa0501740:intron | 25.0% |
| ! | TTACCAAAACAAAGAAATAG+GGG | + | chr3_4:43257984-43258003 | None:intergenic | 25.0% |
| ! | GTTACCAAAACAAAGAAATA+GGG | + | chr3_4:43257985-43258004 | None:intergenic | 25.0% |
| ! | AAATATCAAATCCAACTTAG+TGG | + | chr3_4:43258281-43258300 | None:intergenic | 25.0% |
| ! | ATCTTAGTAAAATTTCAAGG+TGG | - | chr3_4:43258527-43258546 | Msa0501740:intron | 25.0% |
| ! | TCTTAGTAAAATTTCAAGGT+GGG | - | chr3_4:43258528-43258547 | Msa0501740:intron | 25.0% |
| ! | GTTCAGATAATCAATTGATT+AGG | - | chr3_4:43258725-43258744 | Msa0501740:intron | 25.0% |
| ! | GATAATCAATTGATTAGGAA+AGG | - | chr3_4:43258730-43258749 | Msa0501740:intron | 25.0% |
| !! | AAAAGTATAATATCTATGGC+TGG | + | chr3_4:43258758-43258777 | None:intergenic | 25.0% |
| ! | CTATTACTGTATTACTTTGA+TGG | + | chr3_4:43259118-43259137 | None:intergenic | 25.0% |
| ! | AGTAATAGTAAATAGTGCTA+TGG | - | chr3_4:43259130-43259149 | Msa0501740:intron | 25.0% |
| ! | AATAGTGCTATGGAAATTAT+AGG | - | chr3_4:43259140-43259159 | Msa0501740:intron | 25.0% |
| ! | TATGATTAATCACATCAACT+TGG | + | chr3_4:43259206-43259225 | None:intergenic | 25.0% |
| ! | TATATTGAATATAAGGAGAC+TGG | - | chr3_4:43259723-43259742 | Msa0501740:CDS | 25.0% |
| ! | CTTTAACTAACAAAAACCAA+TGG | + | chr3_4:43259765-43259784 | None:intergenic | 25.0% |
| ! | AATGTAATCGTATGAAATGT+AGG | + | chr3_4:43260006-43260025 | None:intergenic | 25.0% |
| ! | AATGTTAATCGAATATTGAC+AGG | + | chr3_4:43260504-43260523 | None:intergenic | 25.0% |
| !!! | GATATTCTTGTTTTACCTTT+TGG | - | chr3_4:43260802-43260821 | Msa0501740:intron | 25.0% |
| !!! | GAATACAATTTTTGGTCATT+AGG | - | chr3_4:43260978-43260997 | Msa0501740:intron | 25.0% |
| ! | TATTGTTCAAAAGATTCTGT+TGG | - | chr3_4:43261151-43261170 | Msa0501740:intron | 25.0% |
| ! | AAATCACACCAAAAAAAGAA+TGG | + | chr3_4:43261670-43261689 | None:intergenic | 25.0% |
| ! | ATTTATTATCTAATTCCACC+TGG | - | chr3_4:43261773-43261792 | Msa0501740:intron | 25.0% |
| !! | ATTCTATTTGTCACTTATGT+AGG | + | chr3_4:43261894-43261913 | None:intergenic | 25.0% |
| !! | AAATTTTACATTTGATGTCG+AGG | + | chr3_4:43261945-43261964 | None:intergenic | 25.0% |
| ! | AAAAAACAGACTTGCATATT+TGG | + | chr3_4:43261990-43262009 | None:intergenic | 25.0% |
| ! | GTGAAGAAATCATTAACAAT+AGG | - | chr3_4:43262029-43262048 | Msa0501740:intron | 25.0% |
| ! | TTTAGTACACAAATACACAA+TGG | + | chr3_4:43262392-43262411 | None:intergenic | 25.0% |
| AACAACAACTCTTCTTCATT+CGG | - | chr3_4:43254726-43254745 | Msa0501740:intron | 30.0% | |
| GAAAAAGGTGAAAGAGAAAA+TGG | + | chr3_4:43254891-43254910 | None:intergenic | 30.0% | |
| TAAATACGTGATTAGGGTTA+TGG | - | chr3_4:43254953-43254972 | Msa0501740:intron | 30.0% | |
| ! | TAGGGTTATGGATTATGATT+AGG | - | chr3_4:43254965-43254984 | Msa0501740:intron | 30.0% |
| TTGTTATGTCATGTGTTGAA+AGG | - | chr3_4:43255177-43255196 | Msa0501740:intron | 30.0% | |
| !!! | GGGTTTTGTTAGTTAATTGT+TGG | - | chr3_4:43255258-43255277 | Msa0501740:intron | 30.0% |
| ATGTCATGTCATATAATGTC+CGG | + | chr3_4:43255309-43255328 | None:intergenic | 30.0% | |
| TATGTGTTGAAACTTTGTTC+TGG | - | chr3_4:43255449-43255468 | Msa0501740:intron | 30.0% | |
| CACCACATTTACGAAATTTA+CGG | - | chr3_4:43256060-43256079 | Msa0501740:intron | 30.0% | |
| AACCGTAAATTTCGTAAATG+TGG | + | chr3_4:43256065-43256084 | None:intergenic | 30.0% | |
| ACAAAACTACGCACAATAAA+GGG | + | chr3_4:43256093-43256112 | None:intergenic | 30.0% | |
| TACAAAACTACGCACAATAA+AGG | + | chr3_4:43256094-43256113 | None:intergenic | 30.0% | |
| GTGATTAGGATTGTCAAAAT+CGG | - | chr3_4:43256123-43256142 | Msa0501740:intron | 30.0% | |
| !!! | AGTTTTGTTACATATCCGAT+TGG | + | chr3_4:43256178-43256197 | None:intergenic | 30.0% |
| ! | CAAAAGTACACACAATAAAG+GGG | + | chr3_4:43256281-43256300 | None:intergenic | 30.0% |
| ! | CACAAAAGTACACACAATAA+AGG | + | chr3_4:43256283-43256302 | None:intergenic | 30.0% |
| ! | ACTGTCATGTTTTGTAACAA+CGG | + | chr3_4:43256382-43256401 | None:intergenic | 30.0% |
| TTAATTTCTTGTTGCAGAGA+TGG | - | chr3_4:43256865-43256884 | Msa0501740:intron | 30.0% | |
| AAACAGATTCTCACTCAAAT+GGG | + | chr3_4:43257116-43257135 | None:intergenic | 30.0% | |
| TCTTCCTTATGTTGAATTTG+GGG | - | chr3_4:43257161-43257180 | Msa0501740:intron | 30.0% | |
| TATATCACGATGATTTGACT+TGG | - | chr3_4:43257282-43257301 | Msa0501740:CDS | 30.0% | |
| AAATGAATTCCATAGCAATG+GGG | + | chr3_4:43257398-43257417 | None:intergenic | 30.0% | |
| CAAATGAATTCCATAGCAAT+GGG | + | chr3_4:43257399-43257418 | None:intergenic | 30.0% | |
| ACAAGCTAAACAATACAGAT+AGG | + | chr3_4:43257465-43257484 | None:intergenic | 30.0% | |
| ATGAATCTGTAGTCAATAGA+AGG | - | chr3_4:43257503-43257522 | Msa0501740:intron | 30.0% | |
| !! | CATATTTGGAATTTTACAGG+AGG | + | chr3_4:43257598-43257617 | None:intergenic | 30.0% |
| !! | AGGCATATTTGGAATTTTAC+AGG | + | chr3_4:43257601-43257620 | None:intergenic | 30.0% |
| TCCTAAACTATGCTTTATGT+TGG | - | chr3_4:43257681-43257700 | Msa0501740:intron | 30.0% | |
| CCTAAACTATGCTTTATGTT+GGG | - | chr3_4:43257682-43257701 | Msa0501740:intron | 30.0% | |
| TACCAAAACAAAGAAATAGG+GGG | + | chr3_4:43257983-43258002 | None:intergenic | 30.0% | |
| GGTTACCAAAACAAAGAAAT+AGG | + | chr3_4:43257986-43258005 | None:intergenic | 30.0% | |
| TTGGAACAAAGTATAACAAC+AGG | + | chr3_4:43258007-43258026 | None:intergenic | 30.0% | |
| TCTAGTCAAGGAAAAATAGT+TGG | + | chr3_4:43258026-43258045 | None:intergenic | 30.0% | |
| AATCACCAAACAGTGAAATT+TGG | - | chr3_4:43258476-43258495 | Msa0501740:intron | 30.0% | |
| AGAAAGTAACATTACCATTC+AGG | + | chr3_4:43258921-43258940 | None:intergenic | 30.0% | |
| TATGCCTCAAATATTCTGAT+GGG | - | chr3_4:43258990-43259009 | Msa0501740:intron | 30.0% | |
| ! | TGTATTTTGCTGAAATGCTT+TGG | - | chr3_4:43259052-43259071 | Msa0501740:intron | 30.0% |
| ! | GTATTTTGCTGAAATGCTTT+GGG | - | chr3_4:43259053-43259072 | Msa0501740:intron | 30.0% |
| CTGTATTACTTTGATGGAAA+TGG | + | chr3_4:43259112-43259131 | None:intergenic | 30.0% | |
| CTATGGAAATTATAGGATTG+AGG | - | chr3_4:43259147-43259166 | Msa0501740:intron | 30.0% | |
| GATTAATCATAGACTGCATA+TGG | - | chr3_4:43259215-43259234 | Msa0501740:intron | 30.0% | |
| ! | GTTTGAATTGTCCACATTTT+TGG | - | chr3_4:43259258-43259277 | Msa0501740:intron | 30.0% |
| TGATGCAGTCTGATATAATA+TGG | - | chr3_4:43259404-43259423 | Msa0501740:intron | 30.0% | |
| TGGGGTAACCTTTAAATAAT+AGG | + | chr3_4:43259564-43259583 | None:intergenic | 30.0% | |
| AATTCAAAAGCAACAAGGAA+AGG | + | chr3_4:43259619-43259638 | None:intergenic | 30.0% | |
| ! | GGATTTTGTGATGAATCTTT+TGG | + | chr3_4:43260071-43260090 | None:intergenic | 30.0% |
| AATTCATCCAAACAAGTTGT+TGG | + | chr3_4:43260125-43260144 | None:intergenic | 30.0% | |
| ! | TGATTCTTGATTGTTAGTCT+TGG | - | chr3_4:43260419-43260438 | Msa0501740:intron | 30.0% |
| TGGTAAATTTATGCAAACAC+AGG | - | chr3_4:43260439-43260458 | Msa0501740:intron | 30.0% | |
| GAATATTGACAGGAAAAATG+TGG | + | chr3_4:43260494-43260513 | None:intergenic | 30.0% | |
| TTTGGAAACTAACAAAACCA+AGG | + | chr3_4:43260696-43260715 | None:intergenic | 30.0% | |
| ! | AAACTGATTTAGCATGTGTT+TGG | + | chr3_4:43260714-43260733 | None:intergenic | 30.0% |
| TTTGAGTAATGGCATTTGTA+TGG | - | chr3_4:43260914-43260933 | Msa0501740:intron | 30.0% | |
| TTGAGTAATGGCATTTGTAT+GGG | - | chr3_4:43260915-43260934 | Msa0501740:intron | 30.0% | |
| AGTGGCAACATAAAATAAAC+TGG | + | chr3_4:43261042-43261061 | None:intergenic | 30.0% | |
| CAATTCTATTAACAAACCTC+GGG | + | chr3_4:43261328-43261347 | None:intergenic | 30.0% | |
| GCAATTCTATTAACAAACCT+CGG | + | chr3_4:43261329-43261348 | None:intergenic | 30.0% | |
| ! | ATTTGAAACTTGGAAGGAAA+GGG | + | chr3_4:43261411-43261430 | None:intergenic | 30.0% |
| ! | TAATGATGGCATTTGAAACT+TGG | + | chr3_4:43261421-43261440 | None:intergenic | 30.0% |
| ACCAAGACTTTGATTAATGA+TGG | + | chr3_4:43261435-43261454 | None:intergenic | 30.0% | |
| TTTATTGCAGAGAAAAAACC+AGG | + | chr3_4:43261794-43261813 | None:intergenic | 30.0% | |
| TAAGTGACAAATAGAATCAG+AGG | - | chr3_4:43261897-43261916 | Msa0501740:intron | 30.0% | |
| AAGTGACAAATAGAATCAGA+GGG | - | chr3_4:43261898-43261917 | Msa0501740:intron | 30.0% | |
| !!! | CTGTTTTTTGTTGAGTGAAA+TGG | - | chr3_4:43262001-43262020 | Msa0501740:intron | 30.0% |
| !!! | GTTTTTTCAAAGTGACTGAA+TGG | + | chr3_4:43262127-43262146 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTGTTTATTCAGG+AGG | - | chr3_4:43262180-43262199 | Msa0501740:intron | 30.0% |
| GGTGAATTGAGTATAAACTA+TGG | - | chr3_4:43262300-43262319 | Msa0501740:CDS | 30.0% | |
| GTTGTTCATAGAAGAAGACA+CGG | + | chr3_4:43254712-43254731 | None:intergenic | 35.0% | |
| !! | GAAGTGTTGAGATATGAGAA+TGG | - | chr3_4:43255137-43255156 | Msa0501740:intron | 35.0% |
| ! | CATGTGTTGAAAGGTTGATT+TGG | - | chr3_4:43255186-43255205 | Msa0501740:intron | 35.0% |
| ! | AATTTTGTGGGAGTGAGAAT+TGG | - | chr3_4:43255606-43255625 | Msa0501740:intron | 35.0% |
| TTTCAATGGAATTTGACGTG+TGG | - | chr3_4:43255629-43255648 | Msa0501740:intron | 35.0% | |
| GCAACCCTAATTTCAACAAA+AGG | + | chr3_4:43255675-43255694 | None:intergenic | 35.0% | |
| TTGTTGAAATTAGGGTTGCA+TGG | - | chr3_4:43255676-43255695 | Msa0501740:intron | 35.0% | |
| TGTTGAAATTAGGGTTGCAT+GGG | - | chr3_4:43255677-43255696 | Msa0501740:intron | 35.0% | |
| TTACGTTACTTCTTGTGCTA+GGG | - | chr3_4:43255783-43255802 | Msa0501740:intron | 35.0% | |
| ! | GTGCGTTACAGATTTTCAAA+GGG | - | chr3_4:43255939-43255958 | Msa0501740:CDS | 35.0% |
| CAAAACTACGCACAATAAAG+GGG | + | chr3_4:43256092-43256111 | None:intergenic | 35.0% | |
| ! | ATGCACAATTACCAGTTTTG+CGG | - | chr3_4:43256248-43256267 | Msa0501740:intron | 35.0% |
| GTGATCTTGATTGTCAAAGT+CGG | - | chr3_4:43256312-43256331 | Msa0501740:intron | 35.0% | |
| !! | TCATCGTTTTGAACACAACA+CGG | + | chr3_4:43256436-43256455 | None:intergenic | 35.0% |
| TGATTGAGAGGGTAAGTAAA+AGG | + | chr3_4:43256787-43256806 | None:intergenic | 35.0% | |
| TCCAGTAAATGTGATTGAGA+GGG | + | chr3_4:43256798-43256817 | None:intergenic | 35.0% | |
| ATCCAGTAAATGTGATTGAG+AGG | + | chr3_4:43256799-43256818 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTTAATGCGCGGTT+AGG | - | chr3_4:43256831-43256850 | Msa0501740:intron | 35.0% |
| GAAACAGATTCTCACTCAAA+TGG | + | chr3_4:43257117-43257136 | None:intergenic | 35.0% | |
| TGAGTGAGAATCTGTTTCAA+TGG | - | chr3_4:43257119-43257138 | Msa0501740:intron | 35.0% | |
| AGAATCTGTTTCAATGGCTT+TGG | - | chr3_4:43257125-43257144 | Msa0501740:intron | 35.0% | |
| GTAACCCCAAATTCAACATA+AGG | + | chr3_4:43257168-43257187 | None:intergenic | 35.0% | |
| ! | ATGTTGAATTTGGGGTTACA+TGG | - | chr3_4:43257169-43257188 | Msa0501740:intron | 35.0% |
| ! | TGTTGAATTTGGGGTTACAT+GGG | - | chr3_4:43257170-43257189 | Msa0501740:intron | 35.0% |
| !! | TGACTTGGTTTCTGTTTGTT+TGG | - | chr3_4:43257297-43257316 | Msa0501740:intron | 35.0% |
| CCAAATGAATTCCATAGCAA+TGG | + | chr3_4:43257400-43257419 | None:intergenic | 35.0% | |
| CCATTGCTATGGAATTCATT+TGG | - | chr3_4:43257397-43257416 | Msa0501740:intron | 35.0% | |
| AAATGAAAATCAACAGGGCA+GGG | + | chr3_4:43257534-43257553 | None:intergenic | 35.0% | |
| AAAATGAAAATCAACAGGGC+AGG | + | chr3_4:43257535-43257554 | None:intergenic | 35.0% | |
| CCTTCAATTTATAGATGCTC+CGG | - | chr3_4:43257618-43257637 | Msa0501740:intron | 35.0% | |
| CCCAACATAAAGCATAGTTT+AGG | + | chr3_4:43257685-43257704 | None:intergenic | 35.0% | |
| GATACCGCTACATTAAAGTT+TGG | + | chr3_4:43257830-43257849 | None:intergenic | 35.0% | |
| TATAGCGGTATCATGAGAAA+GGG | + | chr3_4:43257860-43257879 | None:intergenic | 35.0% | |
| ! | ATGATACCGCTATAGCATTT+TGG | - | chr3_4:43257866-43257885 | Msa0501740:intron | 35.0% |
| ! | TTTCAAAGTTGGTCTAGTCA+AGG | + | chr3_4:43258038-43258057 | None:intergenic | 35.0% |
| CTTGCTAATGGAAACAGAAA+GGG | + | chr3_4:43258240-43258259 | None:intergenic | 35.0% | |
| AAACTGAGAAACCTTGCTAA+TGG | + | chr3_4:43258252-43258271 | None:intergenic | 35.0% | |
| TATCAAATCCAACTTAGTGG+AGG | + | chr3_4:43258278-43258297 | None:intergenic | 35.0% | |
| TTAGACAAACTCATCTAACC+TGG | + | chr3_4:43258403-43258422 | None:intergenic | 35.0% | |
| GATGTCCAAATTTCACTGTT+TGG | + | chr3_4:43258484-43258503 | None:intergenic | 35.0% | |
| ACACACTGTAAGAAAACAAG+AGG | + | chr3_4:43258868-43258887 | None:intergenic | 35.0% | |
| CTATGCCTCAAATATTCTGA+TGG | - | chr3_4:43258989-43259008 | Msa0501740:intron | 35.0% | |
| AACACCCATCAGAATATTTG+AGG | + | chr3_4:43258997-43259016 | None:intergenic | 35.0% | |
| ! | TCAAATATTCTGATGGGTGT+TGG | - | chr3_4:43258996-43259015 | Msa0501740:intron | 35.0% |
| TTATAGGATTGAGGTAAGCA+TGG | - | chr3_4:43259156-43259175 | Msa0501740:intron | 35.0% | |
| ! | ATATGGATGAAGGATTTGCT+AGG | - | chr3_4:43259232-43259251 | Msa0501740:intron | 35.0% |
| !! | TATGGATGAAGGATTTGCTA+GGG | - | chr3_4:43259233-43259252 | Msa0501740:intron | 35.0% |
| TCATGCATGAACCAAAAATG+TGG | + | chr3_4:43259272-43259291 | None:intergenic | 35.0% | |
| TTGAATGTCAGAAGATCCAT+TGG | - | chr3_4:43259746-43259765 | Msa0501740:CDS | 35.0% | |
| TCCTTACTCATTCTGATGTT+GGG | - | chr3_4:43259960-43259979 | Msa0501740:intron | 35.0% | |
| CATTATAAAGAGCTGTGTTG+AGG | + | chr3_4:43260092-43260111 | None:intergenic | 35.0% | |
| ! | TGAAAGTCCAACAACTTGTT+TGG | - | chr3_4:43260115-43260134 | Msa0501740:intron | 35.0% |
| TGACTTTAAACATGCAGTTG+CGG | + | chr3_4:43260614-43260633 | None:intergenic | 35.0% | |
| CTAACAAAACCAAGGTGAAA+AGG | + | chr3_4:43260688-43260707 | None:intergenic | 35.0% | |
| ATAGCTAAACCCTTTGGATT+GGG | + | chr3_4:43260837-43260856 | None:intergenic | 35.0% | |
| TGGGATTGTTTAAACTTTGC+TGG | - | chr3_4:43260862-43260881 | Msa0501740:intron | 35.0% | |
| GGGATTGTTTAAACTTTGCT+GGG | - | chr3_4:43260863-43260882 | Msa0501740:intron | 35.0% | |
| GGATTGTTTAAACTTTGCTG+GGG | - | chr3_4:43260864-43260883 | Msa0501740:intron | 35.0% | |
| GGCAACATAAAATAAACTGG+TGG | + | chr3_4:43261039-43261058 | None:intergenic | 35.0% | |
| ! | TATTTTATGTTGCCACTGTC+TGG | - | chr3_4:43261045-43261064 | Msa0501740:intron | 35.0% |
| TGAGTATGATAGTCTAACGA+AGG | - | chr3_4:43261103-43261122 | Msa0501740:intron | 35.0% | |
| ! | CATTTGAAACTTGGAAGGAA+AGG | + | chr3_4:43261412-43261431 | None:intergenic | 35.0% |
| GCCATCATTAATCAAAGTCT+TGG | - | chr3_4:43261431-43261450 | Msa0501740:intron | 35.0% | |
| !!! | TACTCCCTCCATTCTTTTTT+TGG | - | chr3_4:43261659-43261678 | Msa0501740:intron | 35.0% |
| CACACCAAAAAAAGAATGGA+GGG | + | chr3_4:43261666-43261685 | None:intergenic | 35.0% | |
| TCACACCAAAAAAAGAATGG+AGG | + | chr3_4:43261667-43261686 | None:intergenic | 35.0% | |
| TTTGTCGAATCTCTATGACT+TGG | - | chr3_4:43261963-43261982 | Msa0501740:intron | 35.0% | |
| TAACAATAGGTCCAAGAGAA+AGG | - | chr3_4:43262042-43262061 | Msa0501740:intron | 35.0% | |
| ! | CAGCTCTAACGTTAAAGATT+TGG | + | chr3_4:43262096-43262115 | None:intergenic | 35.0% |
| ! | CAACAACTGATTCACAATGT+TGG | - | chr3_4:43262226-43262245 | Msa0501740:intron | 35.0% |
| ! | AACTGATTCACAATGTTGGA+GGG | - | chr3_4:43262230-43262249 | Msa0501740:intron | 35.0% |
| !! | AGGAGGTTTTGATCATCTAA+TGG | - | chr3_4:43262279-43262298 | Msa0501740:intron | 35.0% |
| ! | ATAGAAGAAGACACGGATTG+GGG | + | chr3_4:43254705-43254724 | None:intergenic | 40.0% |
| CATAGAAGAAGACACGGATT+GGG | + | chr3_4:43254706-43254725 | None:intergenic | 40.0% | |
| TCATAGAAGAAGACACGGAT+TGG | + | chr3_4:43254707-43254726 | None:intergenic | 40.0% | |
| ATCTCAACACTTCTGATCGA+AGG | + | chr3_4:43255130-43255149 | None:intergenic | 40.0% | |
| TGAAACACAGAAATGAGCAC+CGG | - | chr3_4:43255287-43255306 | Msa0501740:intron | 40.0% | |
| ! | GGAGTGAGAATTGGTTTCAA+TGG | - | chr3_4:43255615-43255634 | Msa0501740:intron | 40.0% |
| GTTGAAATTAGGGTTGCATG+GGG | - | chr3_4:43255678-43255697 | Msa0501740:intron | 40.0% | |
| TTGAAATTAGGGTTGCATGG+GGG | - | chr3_4:43255679-43255698 | Msa0501740:intron | 40.0% | |
| GTTACGTTACTTCTTGTGCT+AGG | - | chr3_4:43255782-43255801 | Msa0501740:intron | 40.0% | |
| ! | TTCTTGTGCTAGGGTTTTTG+TGG | - | chr3_4:43255792-43255811 | Msa0501740:intron | 40.0% |
| ! | CGTGCGTTACAGATTTTCAA+AGG | - | chr3_4:43255938-43255957 | Msa0501740:CDS | 40.0% |
| GCAAAACTGGTAATTGTGCA+TGG | + | chr3_4:43256249-43256268 | None:intergenic | 40.0% | |
| AAGTCGGCAAACCTTCTTAA+AGG | - | chr3_4:43256328-43256347 | Msa0501740:intron | 40.0% | |
| ! | GTGCATTTTCAATGTCGTCA+GGG | + | chr3_4:43256621-43256640 | None:intergenic | 40.0% |
| ! | AGTGCATTTTCAATGTCGTC+AGG | + | chr3_4:43256622-43256641 | None:intergenic | 40.0% |
| TGAAAACAAAGTGCGTGAAG+AGG | - | chr3_4:43256714-43256733 | Msa0501740:intron | 40.0% | |
| ACATCTGATGTGTTGAGATG+CGG | + | chr3_4:43256756-43256775 | None:intergenic | 40.0% | |
| AGGGTAAGTAAAAGGTTGTG+GGG | + | chr3_4:43256779-43256798 | None:intergenic | 40.0% | |
| GAGGGTAAGTAAAAGGTTGT+GGG | + | chr3_4:43256780-43256799 | None:intergenic | 40.0% | |
| AGAGGGTAAGTAAAAGGTTG+TGG | + | chr3_4:43256781-43256800 | None:intergenic | 40.0% | |
| ACCCTCTCAATCACATTTAC+TGG | - | chr3_4:43256794-43256813 | Msa0501740:CDS | 40.0% | |
| TTCTTGTTGCAGAGATGGTT+TGG | - | chr3_4:43256870-43256889 | Msa0501740:intron | 40.0% | |
| ! | GATGGTTTGGAACTTTGATC+TGG | - | chr3_4:43256883-43256902 | Msa0501740:intron | 40.0% |
| !! | TTATGAGTTTGCTGTCGTGT+CGG | - | chr3_4:43256965-43256984 | Msa0501740:intron | 40.0% |
| !! | CCTCTTTCTACTTTTCTCTC+AGG | + | chr3_4:43257069-43257088 | None:intergenic | 40.0% |
| CCTGAGAGAAAAGTAGAAAG+AGG | - | chr3_4:43257066-43257085 | Msa0501740:intron | 40.0% | |
| GATTGCTACTGCACTCATAT+GGG | - | chr3_4:43257319-43257338 | Msa0501740:intron | 40.0% | |
| TGAGTAGCAGCAAAATATCG+TGG | - | chr3_4:43257555-43257574 | Msa0501740:intron | 40.0% | |
| ! | CCGGAGCATCTATAAATTGA+AGG | + | chr3_4:43257621-43257640 | None:intergenic | 40.0% |
| AAAGAAACGAAAGGGAACAC+CGG | + | chr3_4:43257640-43257659 | None:intergenic | 40.0% | |
| CTATAGCGGTATCATGAGAA+AGG | + | chr3_4:43257861-43257880 | None:intergenic | 40.0% | |
| ! | ATACCGCTATAGCATTTTGG+AGG | - | chr3_4:43257869-43257888 | Msa0501740:intron | 40.0% |
| !! | CTCCCCCTATTTCTTTGTTT+TGG | - | chr3_4:43257978-43257997 | Msa0501740:intron | 40.0% |
| CCTTGCTAATGGAAACAGAA+AGG | + | chr3_4:43258241-43258260 | None:intergenic | 40.0% | |
| CCTTTCTGTTTCCATTAGCA+AGG | - | chr3_4:43258238-43258257 | Msa0501740:CDS | 40.0% | |
| !! | AGTTTTGTCCTCCACTAAGT+TGG | - | chr3_4:43258267-43258286 | Msa0501740:intron | 40.0% |
| TTGTTAGAACTGTGTGTGTG+TGG | - | chr3_4:43258573-43258592 | Msa0501740:intron | 40.0% | |
| GTTACAGGATATACTTTGCG+TGG | - | chr3_4:43258599-43258618 | Msa0501740:intron | 40.0% | |
| GGAATAGCATCCTTGTATCA+GGG | + | chr3_4:43258900-43258919 | None:intergenic | 40.0% | |
| AGGAATAGCATCCTTGTATC+AGG | + | chr3_4:43258901-43258920 | None:intergenic | 40.0% | |
| ACAAGGATGCTATTCCTGAA+TGG | - | chr3_4:43258904-43258923 | Msa0501740:intron | 40.0% | |
| !! | TGCTGAAATGCTTTGGGAAA+TGG | - | chr3_4:43259059-43259078 | Msa0501740:intron | 40.0% |
| !! | AATGCTTTGGGAAATGGTGT+TGG | - | chr3_4:43259065-43259084 | Msa0501740:intron | 40.0% |
| !! | GGTGTTGGCTTCTCTAAATT+TGG | - | chr3_4:43259080-43259099 | Msa0501740:intron | 40.0% |
| CATAGACTGCATATGGATGA+AGG | - | chr3_4:43259222-43259241 | Msa0501740:intron | 40.0% | |
| GATGGTTAAGGTAATCGCAA+GGG | + | chr3_4:43259511-43259530 | None:intergenic | 40.0% | |
| AGATGGTTAAGGTAATCGCA+AGG | + | chr3_4:43259512-43259531 | None:intergenic | 40.0% | |
| GCGATTACCTTAACCATCTT+AGG | - | chr3_4:43259513-43259532 | Msa0501740:intron | 40.0% | |
| !! | AACCAGACGCTTTTGGAAAT+TGG | - | chr3_4:43259678-43259697 | Msa0501740:intron | 40.0% |
| !! | ATCCAATTTCCAAAAGCGTC+TGG | + | chr3_4:43259683-43259702 | None:intergenic | 40.0% |
| !! | AGACGCTTTTGGAAATTGGA+TGG | - | chr3_4:43259682-43259701 | Msa0501740:intron | 40.0% |
| AGGAACGGATACAAATACAG+AGG | + | chr3_4:43259856-43259875 | None:intergenic | 40.0% | |
| !! | TTGCTTGTTGTGTTCAGGAA+CGG | + | chr3_4:43259871-43259890 | None:intergenic | 40.0% |
| !! | TCGATTTGCTTGTTGTGTTC+AGG | + | chr3_4:43259876-43259895 | None:intergenic | 40.0% |
| GTAAGCCTCAAGTACTCAAA+AGG | + | chr3_4:43259901-43259920 | None:intergenic | 40.0% | |
| ! | TACTTGAGGCTTACTAGTCT+TGG | - | chr3_4:43259907-43259926 | Msa0501740:intron | 40.0% |
| !! | CTTACTAGTCTTGGTGTCAT+CGG | - | chr3_4:43259916-43259935 | Msa0501740:intron | 40.0% |
| CAACATCAGAATGAGTAAGG+AGG | + | chr3_4:43259961-43259980 | None:intergenic | 40.0% | |
| CTCCTTACTCATTCTGATGT+TGG | - | chr3_4:43259959-43259978 | Msa0501740:intron | 40.0% | |
| ACCCAACATCAGAATGAGTA+AGG | + | chr3_4:43259964-43259983 | None:intergenic | 40.0% | |
| TTACTCATTCTGATGTTGGG+TGG | - | chr3_4:43259963-43259982 | Msa0501740:intron | 40.0% | |
| ! | GTCTGAATTTTCTGTTCACC+AGG | - | chr3_4:43260291-43260310 | Msa0501740:intron | 40.0% |
| TAACCTCAGTATCATCAACC+TGG | + | chr3_4:43260312-43260331 | None:intergenic | 40.0% | |
| ! | AATCAGTACACTCACCGTTT+TGG | + | chr3_4:43260404-43260423 | None:intergenic | 40.0% |
| GAAAAATGTGGCTAAGGAGA+TGG | + | chr3_4:43260482-43260501 | None:intergenic | 40.0% | |
| TGACAGGAAAAATGTGGCTA+AGG | + | chr3_4:43260488-43260507 | None:intergenic | 40.0% | |
| ! | GTTTAAAGTCAATCTCACCG+TGG | - | chr3_4:43260623-43260642 | Msa0501740:intron | 40.0% |
| ! | CTACTAGCTTCTCAATACCA+CGG | + | chr3_4:43260643-43260662 | None:intergenic | 40.0% |
| AAAACCAAGGTGAAAAGGCA+CGG | + | chr3_4:43260683-43260702 | None:intergenic | 40.0% | |
| CATAGCTAAACCCTTTGGAT+TGG | + | chr3_4:43260838-43260857 | None:intergenic | 40.0% | |
| CAATCCAAAGGGTTTAGCTA+TGG | - | chr3_4:43260836-43260855 | Msa0501740:intron | 40.0% | |
| ATGACCATAGCTAAACCCTT+TGG | + | chr3_4:43260843-43260862 | None:intergenic | 40.0% | |
| AAAGGGTTTAGCTATGGTCA+TGG | - | chr3_4:43260842-43260861 | Msa0501740:intron | 40.0% | |
| AAGGGTTTAGCTATGGTCAT+GGG | - | chr3_4:43260843-43260862 | Msa0501740:intron | 40.0% | |
| TTAATAGGGAAACCAGACAG+TGG | + | chr3_4:43261060-43261079 | None:intergenic | 40.0% | |
| AAAGATTCTGTTGGACGATG+TGG | - | chr3_4:43261160-43261179 | Msa0501740:intron | 40.0% | |
| AAGATTCTGTTGGACGATGT+GGG | - | chr3_4:43261161-43261180 | Msa0501740:intron | 40.0% | |
| AGAGGCAATTTCAGCAGAAA+GGG | + | chr3_4:43261382-43261401 | None:intergenic | 40.0% | |
| AAGAGGCAATTTCAGCAGAA+AGG | + | chr3_4:43261383-43261402 | None:intergenic | 40.0% | |
| ! | GATGGCATTTGAAACTTGGA+AGG | + | chr3_4:43261417-43261436 | None:intergenic | 40.0% |
| CTGTCTTCCTGACATGTTAA+GGG | - | chr3_4:43261589-43261608 | Msa0501740:intron | 40.0% | |
| CACAAGGAATACTTACACGA+AGG | + | chr3_4:43261634-43261653 | None:intergenic | 40.0% | |
| ATTGCAGAGAAAAAACCAGG+TGG | + | chr3_4:43261791-43261810 | None:intergenic | 40.0% | |
| TCTAGTTACGACCTTTCTCT+TGG | + | chr3_4:43262056-43262075 | None:intergenic | 40.0% | |
| GAGAAAGGTCGTAACTAGAA+CGG | - | chr3_4:43262057-43262076 | Msa0501740:intron | 40.0% | |
| ! | CAACTGATTCACAATGTTGG+AGG | - | chr3_4:43262229-43262248 | Msa0501740:intron | 40.0% |
| TTCACAATGTTGGAGGGAAT+CGG | - | chr3_4:43262236-43262255 | Msa0501740:intron | 40.0% | |
| ! | TTGGGGGCAATTTTCACATG+TGG | + | chr3_4:43254688-43254707 | None:intergenic | 45.0% |
| !! | TAGAAGAAGACACGGATTGG+GGG | + | chr3_4:43254704-43254723 | None:intergenic | 45.0% |
| TTCAGAAGAAGCCATCGAGT+TGG | + | chr3_4:43254778-43254797 | None:intergenic | 45.0% | |
| !!! | AAGAGCGTTTTCACGGAGTT+CGG | + | chr3_4:43254826-43254845 | None:intergenic | 45.0% |
| !!! | GTTCGAGAAGAGCGTTTTCA+CGG | + | chr3_4:43254833-43254852 | None:intergenic | 45.0% |
| GACACACGATACTAAGAAGC+TGG | - | chr3_4:43255024-43255043 | Msa0501740:intron | 45.0% | |
| ! | CGTGTGGCTCATTGATTGAT+CGG | - | chr3_4:43255645-43255664 | Msa0501740:intron | 45.0% |
| AAAGATGTTCAGCTTGCGTG+TGG | - | chr3_4:43256198-43256217 | Msa0501740:intron | 45.0% | |
| AAGATGTTCAGCTTGCGTGT+GGG | - | chr3_4:43256199-43256218 | Msa0501740:intron | 45.0% | |
| GGGGTAAAAAACCGCAAAAC+TGG | + | chr3_4:43256262-43256281 | None:intergenic | 45.0% | |
| !!! | TAGTCGGCATGTCACTTTTG+TGG | + | chr3_4:43256510-43256529 | None:intergenic | 45.0% |
| !! | AAGTGCGTGAAGAGGTATTG+CGG | - | chr3_4:43256722-43256741 | Msa0501740:intron | 45.0% |
| CATCTGATGTGTTGAGATGC+GGG | + | chr3_4:43256755-43256774 | None:intergenic | 45.0% | |
| GGATTGCTACTGCACTCATA+TGG | - | chr3_4:43257318-43257337 | Msa0501740:intron | 45.0% | |
| AAGATCTAGCCCCATTGCTA+TGG | - | chr3_4:43257386-43257405 | Msa0501740:intron | 45.0% | |
| TACTATTGCAGCACTTCTGC+AGG | - | chr3_4:43257420-43257439 | Msa0501740:intron | 45.0% | |
| GGACCTCCAAAATGCTATAG+CGG | + | chr3_4:43257875-43257894 | None:intergenic | 45.0% | |
| CAGATAGTAGAGCATAGCAG+TGG | + | chr3_4:43257896-43257915 | None:intergenic | 45.0% | |
| GATTTGATTGTGCTGGAGTG+AGG | + | chr3_4:43258355-43258374 | None:intergenic | 45.0% | |
| ! | CACACTCGATTTGATTGTGC+TGG | + | chr3_4:43258362-43258381 | None:intergenic | 45.0% |
| AACTCATCTAACCTGGAGCA+GGG | + | chr3_4:43258396-43258415 | None:intergenic | 45.0% | |
| AAACTCATCTAACCTGGAGC+AGG | + | chr3_4:43258397-43258416 | None:intergenic | 45.0% | |
| CAGGATATACTTTGCGTGGT+AGG | - | chr3_4:43258603-43258622 | Msa0501740:intron | 45.0% | |
| TACTATCTTGCGAAGAACGC+AGG | + | chr3_4:43258651-43258670 | None:intergenic | 45.0% | |
| TAGCATCTCACCCTGATACA+AGG | - | chr3_4:43258887-43258906 | Msa0501740:intron | 45.0% | |
| AGGATTGAGGTAAGCATGGT+AGG | - | chr3_4:43259160-43259179 | Msa0501740:intron | 45.0% | |
| AGGTAAGCATGGTAGGTACT+AGG | - | chr3_4:43259167-43259186 | Msa0501740:intron | 45.0% | |
| GGTAAGCATGGTAGGTACTA+GGG | - | chr3_4:43259168-43259187 | Msa0501740:intron | 45.0% | |
| GATTTACAATACCCCAGAGC+AGG | + | chr3_4:43259369-43259388 | None:intergenic | 45.0% | |
| GGAGACTCCTAAGATGGTTA+AGG | + | chr3_4:43259523-43259542 | None:intergenic | 45.0% | |
| CAAAGTGGAGACTCCTAAGA+TGG | + | chr3_4:43259529-43259548 | None:intergenic | 45.0% | |
| AGGAGAAAGTTCGAGCAAAG+TGG | + | chr3_4:43259544-43259563 | None:intergenic | 45.0% | |
| ACTGAAACGGTGCATCAGAT+GGG | + | chr3_4:43259583-43259602 | None:intergenic | 45.0% | |
| TACTGAAACGGTGCATCAGA+TGG | + | chr3_4:43259584-43259603 | None:intergenic | 45.0% | |
| ATCTGATGCACCGTTTCAGT+AGG | - | chr3_4:43259583-43259602 | Msa0501740:intron | 45.0% | |
| ! | ACTGCTAAACCAGACGCTTT+TGG | - | chr3_4:43259671-43259690 | Msa0501740:intron | 45.0% |
| !! | CGAGACCTTTTGAGTACTTG+AGG | - | chr3_4:43259893-43259912 | Msa0501740:intron | 45.0% |
| TGTCATCGGTGCATTAGTGA+AGG | - | chr3_4:43259930-43259949 | Msa0501740:intron | 45.0% | |
| !! | TCACCAGGTTGATGATACTG+AGG | - | chr3_4:43260306-43260325 | Msa0501740:intron | 45.0% |
| ! | CGTGGTATTGAGAAGCTAGT+AGG | - | chr3_4:43260641-43260660 | Msa0501740:intron | 45.0% |
| ATTGGGAGCAGCTATCCAAA+AGG | + | chr3_4:43260820-43260839 | None:intergenic | 45.0% | |
| ATAGCTGCTCCCAATCCAAA+GGG | - | chr3_4:43260825-43260844 | Msa0501740:intron | 45.0% | |
| TGGTCGAGTTCTTGGAAACA+TGG | - | chr3_4:43261226-43261245 | Msa0501740:intron | 45.0% | |
| TCGAGTTCTTGGAAACATGG+TGG | - | chr3_4:43261229-43261248 | Msa0501740:intron | 45.0% | |
| TGCTTCAACAGACGAGATGA+TGG | + | chr3_4:43261272-43261291 | None:intergenic | 45.0% | |
| ATTTCAGCAGAAAGGGAGGA+GGG | + | chr3_4:43261375-43261394 | None:intergenic | 45.0% | |
| AATTTCAGCAGAAAGGGAGG+AGG | + | chr3_4:43261376-43261395 | None:intergenic | 45.0% | |
| GCTGTCTTCCTGACATGTTA+AGG | - | chr3_4:43261588-43261607 | Msa0501740:intron | 45.0% | |
| GTAGCATCCCTTAACATGTC+AGG | + | chr3_4:43261599-43261618 | None:intergenic | 45.0% | |
| TGGAGGGAGTAGTAATCACA+AGG | + | chr3_4:43261650-43261669 | None:intergenic | 45.0% | |
| TCACAATGTTGGAGGGAATC+GGG | - | chr3_4:43262237-43262256 | Msa0501740:intron | 45.0% | |
| !! | ATATTAAATTAAAATAAATG+CGG | + | chr3_4:43258190-43258209 | None:intergenic | 5.0% |
| !! | ACATAAAAAAAAAAAAAAAA+CGG | - | chr3_4:43258821-43258840 | Msa0501740:intron | 5.0% |
| !! | AGCCATCGAGTTGGAAGAAG+CGG | + | chr3_4:43254769-43254788 | None:intergenic | 50.0% |
| !! | AGAGCGTTTTCACGGAGTTC+GGG | + | chr3_4:43254825-43254844 | None:intergenic | 50.0% |
| CGCTCTTCTCGAACTCTCTA+AGG | - | chr3_4:43254839-43254858 | Msa0501740:three_prime_UTR | 50.0% | |
| ! | CTTCTGATCGAAGGCGTGTT+TGG | + | chr3_4:43255121-43255140 | None:intergenic | 50.0% |
| ACAAATGTTCAGCTTGCGCG+TGG | - | chr3_4:43256009-43256028 | Msa0501740:intron | 50.0% | |
| CAAATGTTCAGCTTGCGCGT+GGG | - | chr3_4:43256010-43256029 | Msa0501740:intron | 50.0% | |
| AAATGTTCAGCTTGCGCGTG+GGG | - | chr3_4:43256011-43256030 | Msa0501740:intron | 50.0% | |
| AGATGTTCAGCTTGCGTGTG+GGG | - | chr3_4:43256200-43256219 | Msa0501740:intron | 50.0% | |
| ! | AAGTGACATGCCGACTACTC+AGG | - | chr3_4:43256513-43256532 | Msa0501740:intron | 50.0% |
| ! | AGTGACATGCCGACTACTCA+GGG | - | chr3_4:43256514-43256533 | Msa0501740:intron | 50.0% |
| AGAACGCATCGTGCCATCTT+TGG | + | chr3_4:43256566-43256585 | None:intergenic | 50.0% | |
| TGCACTTCGTGAGTTCTGCA+AGG | - | chr3_4:43256636-43256655 | Msa0501740:intron | 50.0% | |
| !! | AGTGCGTGAAGAGGTATTGC+GGG | - | chr3_4:43256723-43256742 | Msa0501740:intron | 50.0% |
| AGGAGGTTCACTGTAGAGAG+AGG | + | chr3_4:43257581-43257600 | None:intergenic | 50.0% | |
| GGGAGATATAGAGCAGACTG+AGG | + | chr3_4:43258220-43258239 | None:intergenic | 50.0% | |
| GGTTGGGAGGAGACAAAACA+GGG | + | chr3_4:43258334-43258353 | None:intergenic | 50.0% | |
| AGGTTGGGAGGAGACAAAAC+AGG | + | chr3_4:43258335-43258354 | None:intergenic | 50.0% | |
| GATTGTGCTGGAGTGAGGTT+GGG | + | chr3_4:43258350-43258369 | None:intergenic | 50.0% | |
| TGATTGTGCTGGAGTGAGGT+TGG | + | chr3_4:43258351-43258370 | None:intergenic | 50.0% | |
| ! | GTGTGTGTGTGGACTGTTAC+AGG | - | chr3_4:43258584-43258603 | Msa0501740:intron | 50.0% |
| TATCTTGCGAAGAACGCAGG+TGG | + | chr3_4:43258648-43258667 | None:intergenic | 50.0% | |
| !! | GGATGAAGGATTTGCTAGGG+TGG | - | chr3_4:43259236-43259255 | Msa0501740:intron | 50.0% |
| TGACGAATTCTCTCCTGCTC+TGG | - | chr3_4:43259353-43259372 | Msa0501740:intron | 50.0% | |
| GACGAATTCTCTCCTGCTCT+GGG | - | chr3_4:43259354-43259373 | Msa0501740:intron | 50.0% | |
| ACGAATTCTCTCCTGCTCTG+GGG | - | chr3_4:43259355-43259374 | Msa0501740:intron | 50.0% | |
| CTGAAACGGTGCATCAGATG+GGG | + | chr3_4:43259582-43259601 | None:intergenic | 50.0% | |
| CACGACTACGCCTACTGAAA+CGG | + | chr3_4:43259596-43259615 | None:intergenic | 50.0% | |
| TGTGCGCTGAAGACAAAAGC+AGG | + | chr3_4:43259831-43259850 | None:intergenic | 50.0% | |
| GATAGCTGCTCCCAATCCAA+AGG | - | chr3_4:43260824-43260843 | Msa0501740:intron | 50.0% | |
| TTCGCTGTTGGTCGAGTTCT+TGG | - | chr3_4:43261218-43261237 | Msa0501740:intron | 50.0% | |
| TTCGTCTGTCAGATAACCCG+AGG | - | chr3_4:43261309-43261328 | Msa0501740:intron | 50.0% | |
| TTTCAGCAGAAAGGGAGGAG+GGG | + | chr3_4:43261374-43261393 | None:intergenic | 50.0% | |
| GGCAATTTCAGCAGAAAGGG+AGG | + | chr3_4:43261379-43261398 | None:intergenic | 50.0% | |
| ! | GGAAGGAAAGGGCATGAAAG+AGG | + | chr3_4:43261400-43261419 | None:intergenic | 50.0% |
| TTCAGGAGGACCCAACAACT+AGG | - | chr3_4:43262194-43262213 | Msa0501740:intron | 50.0% | |
| AGGACCCAACAACTAGGAAG+TGG | - | chr3_4:43262200-43262219 | Msa0501740:intron | 50.0% | |
| GCAGCCACTTCCTAGTTGTT+GGG | + | chr3_4:43262207-43262226 | None:intergenic | 50.0% | |
| TGCAGCCACTTCCTAGTTGT+TGG | + | chr3_4:43262208-43262227 | None:intergenic | 50.0% | |
| TTGGAAGAAGCGGGAGAAGG+AGG | + | chr3_4:43254759-43254778 | None:intergenic | 55.0% | |
| GAGTTGGAAGAAGCGGGAGA+AGG | + | chr3_4:43254762-43254781 | None:intergenic | 55.0% | |
| TCCCGCTTCTTCCAACTCGA+TGG | - | chr3_4:43254764-43254783 | Msa0501740:three_prime_UTR | 55.0% | |
| !! | GCCATCGAGTTGGAAGAAGC+GGG | + | chr3_4:43254768-43254787 | None:intergenic | 55.0% |
| AATGTTCAGCTTGCGCGTGG+GGG | - | chr3_4:43256012-43256031 | Msa0501740:intron | 55.0% | |
| GATGTTCAGCTTGCGTGTGG+GGG | - | chr3_4:43256201-43256220 | Msa0501740:intron | 55.0% | |
| ATGTTCAGCTTGCGTGTGGG+GGG | - | chr3_4:43256202-43256221 | Msa0501740:intron | 55.0% | |
| ACGCATCGTGCCATCTTTGG+CGG | + | chr3_4:43256563-43256582 | None:intergenic | 55.0% | |
| TGCGAAGAACGCAGGTGGAA+TGG | + | chr3_4:43258643-43258662 | None:intergenic | 55.0% | |
| TGCCTGCGCACTATGGAGAT+GGG | - | chr3_4:43260367-43260386 | Msa0501740:intron | 55.0% | |
| GGGGAGTGAGCTCTCCAAAA+CGG | - | chr3_4:43260387-43260406 | Msa0501740:intron | 55.0% | |
| ! | CCAAGGTGAAAAGGCACGGT+TGG | + | chr3_4:43260679-43260698 | None:intergenic | 55.0% |
| ! | CCAACCGTGCCTTTTCACCT+TGG | - | chr3_4:43260676-43260695 | Msa0501740:intron | 55.0% |
| AACGAAGGCTCTGCTGCAAC+AGG | - | chr3_4:43261118-43261137 | Msa0501740:intron | 55.0% | |
| TCTGTTGGACGATGTGGGCT+TGG | - | chr3_4:43261166-43261185 | Msa0501740:intron | 55.0% | |
| !!! | GCTGAGCGCTTTTTCGCTGT+TGG | - | chr3_4:43261206-43261225 | Msa0501740:intron | 55.0% |
| AATCGGGTTCCTGCACTGCA+AGG | - | chr3_4:43262253-43262272 | Msa0501740:intron | 55.0% | |
| ATGTTCAGCTTGCGCGTGGG+GGG | - | chr3_4:43256013-43256032 | Msa0501740:intron | 60.0% | |
| ! | GGGGGGCGCGTTAAAATGTG+TGG | - | chr3_4:43256030-43256049 | Msa0501740:intron | 60.0% |
| GCAGTGGCACCCTGAGTAGT+CGG | + | chr3_4:43256526-43256545 | None:intergenic | 60.0% | |
| CATCGTGCCATCTTTGGCGG+CGG | + | chr3_4:43256560-43256579 | None:intergenic | 60.0% | |
| TGGCACGATGCGTTCTGCTG+CGG | - | chr3_4:43256570-43256589 | Msa0501740:intron | 60.0% | |
| TGTGCTGGAGTGAGGTTGGG+AGG | + | chr3_4:43258347-43258366 | None:intergenic | 60.0% | |
| CAATGCTCTTGCCCTGCTCC+AGG | - | chr3_4:43258382-43258401 | Msa0501740:intron | 60.0% | |
| TCCATAGTGCGCAGGCACAG+GGG | + | chr3_4:43260364-43260383 | None:intergenic | 60.0% | |
| CTCCATAGTGCGCAGGCACA+GGG | + | chr3_4:43260365-43260384 | None:intergenic | 60.0% | |
| TCTCCATAGTGCGCAGGCAC+AGG | + | chr3_4:43260366-43260385 | None:intergenic | 60.0% | |
| GTGCCTGCGCACTATGGAGA+TGG | - | chr3_4:43260366-43260385 | Msa0501740:intron | 60.0% | |
| GCCTGCGCACTATGGAGATG+GGG | - | chr3_4:43260368-43260387 | Msa0501740:intron | 60.0% | |
| TCCCCATCTCCATAGTGCGC+AGG | + | chr3_4:43260372-43260391 | None:intergenic | 60.0% | |
| AGAAAGGGAGGAGGGGAAGG+AGG | + | chr3_4:43261367-43261386 | None:intergenic | 60.0% | |
| AGCAGAAAGGGAGGAGGGGA+AGG | + | chr3_4:43261370-43261389 | None:intergenic | 60.0% | |
| GTTCCTGCACTGCAAGGTGG+AGG | - | chr3_4:43262259-43262278 | Msa0501740:intron | 60.0% | |
| !! | TACTCAGGGTGCCACTGCCC+AGG | - | chr3_4:43256528-43256547 | Msa0501740:intron | 65.0% |
| !! | ACTCAGGGTGCCACTGCCCA+GGG | - | chr3_4:43256529-43256548 | Msa0501740:intron | 65.0% |
| TTTGGCGGCGGCTGAACCCT+GGG | + | chr3_4:43256548-43256567 | None:intergenic | 65.0% | |
| GGTTCAGCCGCCGCCAAAGA+TGG | - | chr3_4:43256550-43256569 | Msa0501740:intron | 65.0% | |
| TCCCCTGTGCCTGCGCACTA+TGG | - | chr3_4:43260360-43260379 | Msa0501740:intron | 65.0% | |
| CGGGTTCCTGCACTGCAAGG+TGG | - | chr3_4:43262256-43262275 | Msa0501740:intron | 65.0% | |
| CCTCCTCCACCTTGCAGTGC+AGG | + | chr3_4:43262265-43262284 | None:intergenic | 65.0% | |
| CCTGCACTGCAAGGTGGAGG+AGG | - | chr3_4:43262262-43262281 | Msa0501740:intron | 65.0% | |
| CTTTGGCGGCGGCTGAACCC+TGG | + | chr3_4:43256549-43256568 | None:intergenic | 70.0% | |
| GGCGGCTGAACCCTGGGCAG+TGG | + | chr3_4:43256542-43256561 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 43254669 | 43262479 | 43254669 | ID=Msa0501740;Name=Msa0501740 |
| chr3_4 | mRNA | 43254669 | 43262479 | 43254669 | ID=Msa0501740-mRNA-1;Parent=Msa0501740;Name=Msa0501740-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.87|0.88|1|0.75|0.77|9|218|275 |
| chr3_4 | exon | 43254669 | 43254718 | 43254669 | ID=Msa0501740-mRNA-1:exon:9171;Parent=Msa0501740-mRNA-1 |
| chr3_4 | exon | 43254745 | 43254949 | 43254745 | ID=Msa0501740-mRNA-1:exon:9170;Parent=Msa0501740-mRNA-1 |
| chr3_4 | exon | 43255818 | 43256008 | 43255818 | ID=Msa0501740-mRNA-1:exon:9169;Parent=Msa0501740-mRNA-1 |
| chr3_4 | exon | 43256740 | 43256835 | 43256740 | ID=Msa0501740-mRNA-1:exon:9168;Parent=Msa0501740-mRNA-1 |
| chr3_4 | exon | 43257197 | 43257303 | 43257197 | ID=Msa0501740-mRNA-1:exon:9167;Parent=Msa0501740-mRNA-1 |
| chr3_4 | exon | 43258223 | 43258265 | 43258223 | ID=Msa0501740-mRNA-1:exon:9166;Parent=Msa0501740-mRNA-1 |
| chr3_4 | exon | 43258745 | 43258834 | 43258745 | ID=Msa0501740-mRNA-1:exon:9165;Parent=Msa0501740-mRNA-1 |
| chr3_4 | exon | 43259707 | 43259778 | 43259707 | ID=Msa0501740-mRNA-1:exon:9164;Parent=Msa0501740-mRNA-1 |
| chr3_4 | exon | 43262288 | 43262479 | 43262288 | ID=Msa0501740-mRNA-1:exon:9163;Parent=Msa0501740-mRNA-1 |
| chr3_4 | CDS | 43262288 | 43262479 | 43262288 | ID=Msa0501740-mRNA-1:cds;Parent=Msa0501740-mRNA-1 |
| chr3_4 | CDS | 43259707 | 43259778 | 43259707 | ID=Msa0501740-mRNA-1:cds;Parent=Msa0501740-mRNA-1 |
| chr3_4 | CDS | 43258745 | 43258834 | 43258745 | ID=Msa0501740-mRNA-1:cds;Parent=Msa0501740-mRNA-1 |
| chr3_4 | CDS | 43258223 | 43258265 | 43258223 | ID=Msa0501740-mRNA-1:cds;Parent=Msa0501740-mRNA-1 |
| chr3_4 | CDS | 43257197 | 43257303 | 43257197 | ID=Msa0501740-mRNA-1:cds;Parent=Msa0501740-mRNA-1 |
| chr3_4 | CDS | 43256740 | 43256835 | 43256740 | ID=Msa0501740-mRNA-1:cds;Parent=Msa0501740-mRNA-1 |
| chr3_4 | CDS | 43255818 | 43256008 | 43255818 | ID=Msa0501740-mRNA-1:cds;Parent=Msa0501740-mRNA-1 |
| chr3_4 | CDS | 43254913 | 43254949 | 43254913 | ID=Msa0501740-mRNA-1:cds;Parent=Msa0501740-mRNA-1 |
| chr3_4 | three_prime_UTR | 43254745 | 43254912 | 43254745 | ID=Msa0501740-mRNA-1:three_prime_utr;Parent=Msa0501740-mRNA-1 |
| chr3_4 | three_prime_UTR | 43254669 | 43254718 | 43254669 | ID=Msa0501740-mRNA-1:three_prime_utr;Parent=Msa0501740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
