Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0503790 | XP_024634637.2 | 77.899 | 276 | 49 | 2 | 1 | 264 | 1 | 276 | 1.44e-148 | 436 |
Msa0503790 | XP_024634637.2 | 81.648 | 267 | 25 | 2 | 260 | 502 | 20 | 286 | 3.48e-151 | 443 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0503790 | sp|Q9XIB4|Y1475_ARATH | 32.308 | 130 | 80 | 3 | 253 | 376 | 37 | 164 | 9.53e-13 | 70.1 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0503790 | A0A445BE91 | 42.705 | 281 | 121 | 7 | 1 | 264 | 514 | 771 | 1.73e-54 | 206 |
Msa0503790 | A0A445BE91 | 43.806 | 557 | 227 | 13 | 1 | 494 | 5 | 538 | 1.32e-135 | 420 |
Msa0503790 | A0A445BE91 | 45.279 | 519 | 226 | 15 | 25 | 498 | 272 | 777 | 5.17e-131 | 408 |
Msa0503790 | A0A445BE91 | 49.042 | 261 | 110 | 7 | 253 | 498 | 14 | 266 | 1.63e-63 | 231 |
Gene ID | Type | Classification |
---|---|---|
Msa0503790 | TF | B3 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0503790 | MtrunA17_Chr3g0103181 | 68.841 | 276 | 70 | 4 | 1 | 264 | 1 | 272 | 9.25e-125 | 365 |
Msa0503790 | MtrunA17_Chr3g0103181 | 65.637 | 259 | 69 | 2 | 260 | 498 | 20 | 278 | 1.00e-111 | 332 |
Msa0503790 | MtrunA17_Chr3g0103171 | 67.323 | 254 | 69 | 3 | 25 | 264 | 5 | 258 | 2.68e-111 | 330 |
Msa0503790 | MtrunA17_Chr3g0103171 | 63.846 | 260 | 68 | 3 | 265 | 498 | 5 | 264 | 3.34e-106 | 317 |
Msa0503790 | MtrunA17_Chr3g0103191 | 66.932 | 251 | 70 | 3 | 1 | 238 | 1 | 251 | 2.69e-111 | 330 |
Msa0503790 | MtrunA17_Chr3g0103191 | 66.376 | 229 | 50 | 5 | 264 | 466 | 24 | 251 | 3.40e-94 | 286 |
Msa0503790 | MtrunA17_Chr3g0103201 | 68.317 | 202 | 62 | 2 | 65 | 264 | 12 | 213 | 8.93e-89 | 271 |
Msa0503790 | MtrunA17_Chr3g0103201 | 64.384 | 219 | 53 | 3 | 305 | 498 | 1 | 219 | 5.76e-87 | 266 |
Msa0503790 | MtrunA17_Chr3g0103161 | 93.651 | 126 | 8 | 0 | 377 | 502 | 1 | 126 | 4.07e-82 | 250 |
Msa0503790 | MtrunA17_Chr3g0103161 | 89.565 | 115 | 12 | 0 | 150 | 264 | 2 | 116 | 4.18e-67 | 212 |
Msa0503790 | MtrunA17_Chr3g0103151 | 71.519 | 158 | 33 | 2 | 1 | 146 | 1 | 158 | 1.63e-73 | 229 |
Msa0503790 | MtrunA17_Chr3g0103151 | 76.515 | 132 | 22 | 2 | 253 | 375 | 10 | 141 | 3.80e-64 | 205 |
Msa0503790 | MtrunA17_Chr1g0163071 | 33.798 | 287 | 137 | 10 | 26 | 266 | 2 | 281 | 1.86e-38 | 142 |
Msa0503790 | MtrunA17_Chr1g0163071 | 30.928 | 291 | 136 | 10 | 266 | 498 | 2 | 285 | 8.12e-33 | 127 |
Msa0503790 | MtrunA17_Chr8g0390841 | 31.642 | 335 | 167 | 10 | 4 | 292 | 31 | 349 | 8.95e-38 | 145 |
Msa0503790 | MtrunA17_Chr8g0390841 | 28.179 | 291 | 149 | 7 | 259 | 498 | 48 | 329 | 1.14e-29 | 122 |
Msa0503790 | MtrunA17_Chr8g0390841 | 50.000 | 64 | 31 | 1 | 435 | 498 | 454 | 516 | 5.22e-12 | 68.2 |
Msa0503790 | MtrunA17_Chr1g0208771 | 27.397 | 511 | 274 | 22 | 21 | 498 | 10 | 456 | 8.21e-37 | 141 |
Msa0503790 | MtrunA17_Chr1g0208771 | 28.620 | 297 | 137 | 10 | 265 | 502 | 12 | 292 | 1.90e-29 | 120 |
Msa0503790 | MtrunA17_Chr7g0233561 | 29.210 | 291 | 140 | 11 | 263 | 498 | 31 | 310 | 1.21e-28 | 115 |
Msa0503790 | MtrunA17_Chr7g0233561 | 30.662 | 287 | 163 | 11 | 9 | 260 | 15 | 300 | 9.92e-27 | 110 |
Msa0503790 | MtrunA17_Chr1g0163251 | 28.676 | 272 | 163 | 6 | 258 | 501 | 13 | 281 | 2.55e-28 | 116 |
Msa0503790 | MtrunA17_Chr1g0163251 | 28.413 | 271 | 169 | 6 | 12 | 264 | 9 | 272 | 8.55e-26 | 108 |
Msa0503790 | MtrunA17_Chr7g0233521 | 30.651 | 261 | 152 | 7 | 266 | 498 | 2 | 261 | 8.71e-28 | 112 |
Msa0503790 | MtrunA17_Chr7g0233521 | 30.268 | 261 | 145 | 8 | 26 | 260 | 2 | 251 | 3.79e-20 | 90.5 |
Msa0503790 | MtrunA17_Chr3g0077411 | 23.020 | 543 | 288 | 16 | 22 | 498 | 37 | 515 | 1.07e-26 | 113 |
Msa0503790 | MtrunA17_Chr3g0077411 | 25.795 | 283 | 156 | 9 | 233 | 501 | 7 | 249 | 2.23e-16 | 81.6 |
Msa0503790 | MtrunA17_Chr3g0077411 | 23.509 | 285 | 165 | 7 | 1 | 261 | 251 | 506 | 1.29e-11 | 67.0 |
Msa0503790 | MtrunA17_Chr3g0131891 | 28.625 | 269 | 158 | 8 | 264 | 498 | 33 | 301 | 6.22e-26 | 108 |
Msa0503790 | MtrunA17_Chr3g0131891 | 28.623 | 276 | 171 | 9 | 9 | 259 | 16 | 290 | 5.29e-21 | 94.0 |
Msa0503790 | MtrunA17_Chr1g0163131 | 28.523 | 298 | 168 | 10 | 2 | 262 | 8 | 297 | 1.43e-24 | 103 |
Msa0503790 | MtrunA17_Chr1g0163131 | 28.772 | 285 | 148 | 10 | 259 | 496 | 27 | 303 | 2.78e-24 | 103 |
Msa0503790 | MtrunA17_Chr1g0163181 | 28.269 | 283 | 159 | 10 | 258 | 499 | 13 | 292 | 2.02e-23 | 102 |
Msa0503790 | MtrunA17_Chr1g0163181 | 26.619 | 278 | 170 | 8 | 14 | 262 | 11 | 283 | 1.49e-19 | 91.3 |
Msa0503790 | MtrunA17_Chr7g0233541 | 28.058 | 278 | 154 | 10 | 266 | 498 | 2 | 278 | 4.31e-23 | 99.4 |
Msa0503790 | MtrunA17_Chr7g0233541 | 27.273 | 275 | 152 | 11 | 26 | 260 | 2 | 268 | 1.03e-15 | 77.8 |
Msa0503790 | MtrunA17_Chr3g0077381 | 26.933 | 375 | 201 | 13 | 13 | 354 | 23 | 357 | 9.80e-23 | 100 |
Msa0503790 | MtrunA17_Chr3g0077381 | 25.410 | 244 | 123 | 5 | 264 | 501 | 34 | 224 | 5.63e-14 | 73.9 |
Msa0503790 | MtrunA17_Chr7g0233531 | 28.462 | 260 | 159 | 8 | 266 | 498 | 2 | 261 | 2.72e-22 | 96.7 |
Msa0503790 | MtrunA17_Chr7g0233531 | 27.953 | 254 | 160 | 7 | 26 | 260 | 2 | 251 | 1.09e-14 | 74.3 |
Msa0503790 | MtrunA17_Chr3g0077461 | 24.532 | 534 | 252 | 17 | 20 | 493 | 19 | 461 | 8.49e-22 | 98.2 |
Msa0503790 | MtrunA17_Chr1g0163201 | 25.632 | 277 | 168 | 7 | 262 | 503 | 15 | 288 | 2.17e-20 | 93.2 |
Msa0503790 | MtrunA17_Chr1g0163201 | 23.684 | 304 | 211 | 5 | 8 | 291 | 1 | 303 | 7.34e-18 | 85.5 |
Msa0503790 | MtrunA17_Chr4g0067431 | 27.304 | 293 | 161 | 11 | 10 | 258 | 13 | 297 | 5.10e-20 | 90.9 |
Msa0503790 | MtrunA17_Chr4g0067431 | 27.208 | 283 | 142 | 9 | 259 | 486 | 24 | 297 | 3.96e-17 | 82.4 |
Msa0503790 | MtrunA17_Chr4g0009491 | 24.103 | 390 | 190 | 11 | 16 | 355 | 3 | 336 | 7.36e-20 | 92.0 |
Msa0503790 | MtrunA17_Chr4g0009491 | 21.834 | 229 | 128 | 4 | 264 | 479 | 11 | 201 | 1.49e-11 | 66.2 |
Msa0503790 | MtrunA17_Chr3g0077451 | 27.309 | 249 | 147 | 5 | 264 | 501 | 10 | 235 | 1.73e-19 | 87.8 |
Msa0503790 | MtrunA17_Chr3g0077451 | 25.940 | 266 | 123 | 9 | 24 | 264 | 10 | 226 | 2.93e-13 | 69.7 |
Msa0503790 | MtrunA17_Chr5g0429931 | 24.096 | 249 | 162 | 4 | 265 | 501 | 10 | 243 | 3.27e-19 | 87.0 |
Msa0503790 | MtrunA17_Chr5g0429931 | 25.296 | 253 | 144 | 8 | 25 | 262 | 10 | 232 | 2.73e-12 | 67.0 |
Msa0503790 | MtrunA17_Chr1g0163261 | 25.468 | 267 | 167 | 7 | 263 | 501 | 22 | 284 | 1.72e-18 | 86.3 |
Msa0503790 | MtrunA17_Chr1g0163261 | 27.397 | 292 | 154 | 9 | 9 | 264 | 6 | 275 | 5.30e-17 | 81.6 |
Msa0503790 | MtrunA17_Chr7g0233571 | 43.269 | 104 | 46 | 2 | 9 | 99 | 7 | 110 | 1.45e-17 | 81.6 |
Msa0503790 | MtrunA17_Chr7g0233571 | 42.222 | 90 | 46 | 1 | 259 | 342 | 19 | 108 | 8.79e-17 | 79.3 |
Msa0503790 | MtrunA17_Chr5g0419201 | 29.299 | 157 | 89 | 4 | 254 | 389 | 15 | 170 | 1.91e-17 | 80.5 |
Msa0503790 | MtrunA17_Chr5g0419201 | 31.210 | 157 | 78 | 6 | 12 | 145 | 16 | 165 | 3.72e-15 | 73.9 |
Msa0503790 | MtrunA17_Chr1g0163231 | 25.092 | 271 | 167 | 9 | 259 | 501 | 18 | 280 | 3.48e-17 | 82.4 |
Msa0503790 | MtrunA17_Chr1g0163231 | 23.208 | 293 | 189 | 7 | 9 | 278 | 6 | 285 | 5.74e-13 | 69.7 |
Msa0503790 | MtrunA17_Chr3g0077361 | 28.750 | 240 | 131 | 7 | 262 | 493 | 52 | 259 | 7.19e-17 | 83.2 |
Msa0503790 | MtrunA17_Chr4g0033961 | 31.429 | 140 | 82 | 2 | 259 | 384 | 15 | 154 | 1.40e-16 | 82.0 |
Msa0503790 | MtrunA17_Chr1g0171611 | 23.596 | 267 | 156 | 8 | 263 | 501 | 22 | 268 | 9.63e-16 | 77.8 |
Msa0503790 | MtrunA17_Chr1g0171611 | 24.658 | 292 | 174 | 8 | 9 | 278 | 6 | 273 | 4.87e-14 | 72.8 |
Msa0503790 | MtrunA17_Chr1g0163221 | 25.632 | 277 | 169 | 8 | 10 | 258 | 9 | 276 | 2.34e-15 | 77.4 |
Msa0503790 | MtrunA17_Chr1g0163221 | 25.191 | 262 | 157 | 9 | 259 | 486 | 20 | 276 | 1.43e-12 | 68.9 |
Msa0503790 | MtrunA17_Chr1g0154111 | 25.397 | 189 | 122 | 3 | 167 | 336 | 251 | 439 | 3.38e-15 | 78.2 |
Msa0503790 | MtrunA17_Chr1g0163191 | 33.333 | 114 | 65 | 2 | 12 | 116 | 9 | 120 | 3.65e-15 | 73.2 |
Msa0503790 | MtrunA17_Chr1g0163191 | 29.730 | 111 | 68 | 3 | 258 | 360 | 13 | 121 | 8.15e-12 | 63.5 |
Msa0503790 | MtrunA17_Chr1g0162441 | 40.789 | 76 | 45 | 0 | 259 | 334 | 16 | 91 | 5.48e-14 | 73.9 |
Msa0503790 | MtrunA17_Chr1g0162411 | 40.449 | 89 | 49 | 1 | 259 | 343 | 16 | 104 | 7.83e-14 | 73.6 |
Msa0503790 | MtrunA17_Chr1g0163101 | 34.167 | 120 | 64 | 4 | 18 | 122 | 25 | 144 | 8.76e-14 | 69.7 |
Msa0503790 | MtrunA17_Chr1g0162161 | 28.402 | 169 | 95 | 5 | 26 | 184 | 4 | 156 | 9.58e-14 | 68.9 |
Msa0503790 | MtrunA17_Chr1g0163241 | 36.000 | 100 | 53 | 2 | 15 | 105 | 14 | 111 | 3.27e-13 | 67.8 |
Msa0503790 | MtrunA17_Chr1g0163241 | 32.039 | 103 | 56 | 3 | 253 | 343 | 4 | 104 | 2.89e-11 | 62.0 |
Msa0503790 | MtrunA17_Chr1g0163081 | 31.852 | 135 | 78 | 3 | 26 | 146 | 6 | 140 | 3.76e-13 | 67.0 |
Msa0503790 | MtrunA17_Chr1g0163081 | 36.522 | 115 | 57 | 5 | 266 | 368 | 6 | 116 | 7.72e-11 | 60.5 |
Msa0503790 | MtrunA17_Chr1g0163121 | 33.594 | 128 | 66 | 4 | 24 | 132 | 9 | 136 | 9.93e-13 | 65.9 |
Msa0503790 | MtrunA17_Chr1g0163161 | 34.586 | 133 | 67 | 5 | 38 | 154 | 1 | 129 | 3.12e-12 | 63.9 |
Msa0503790 | MtrunA17_Chr1g0163161 | 33.824 | 136 | 72 | 5 | 278 | 401 | 1 | 130 | 2.22e-11 | 61.6 |
Msa0503790 | MtrunA17_Chr6g0476181 | 36.937 | 111 | 61 | 3 | 26 | 127 | 2 | 112 | 3.57e-12 | 64.7 |
Msa0503790 | MtrunA17_Chr6g0476181 | 34.783 | 138 | 75 | 6 | 266 | 392 | 2 | 135 | 1.11e-11 | 63.2 |
Msa0503790 | MtrunA17_Chr1g0163061 | 35.577 | 104 | 53 | 2 | 8 | 97 | 11 | 114 | 3.97e-12 | 66.6 |
Msa0503790 | MtrunA17_Chr1g0163141 | 37.113 | 97 | 53 | 1 | 24 | 112 | 9 | 105 | 7.83e-12 | 64.3 |
Msa0503790 | MtrunA17_Chr1g0163141 | 31.053 | 190 | 93 | 9 | 262 | 423 | 7 | 186 | 2.13e-11 | 63.2 |
Msa0503790 | MtrunA17_Chr6g0467351 | 29.577 | 142 | 70 | 5 | 10 | 134 | 13 | 141 | 3.97e-11 | 63.2 |
Msa0503790 | MtrunA17_Chr1g0154161 | 21.071 | 280 | 189 | 8 | 13 | 266 | 30 | 303 | 4.23e-11 | 64.3 |
Msa0503790 | MtrunA17_Chr1g0162421 | 43.103 | 58 | 33 | 0 | 264 | 321 | 7 | 64 | 8.24e-11 | 57.8 |
Msa0503790 | MtrunA17_Chr3g0077431 | 25.806 | 217 | 125 | 7 | 297 | 501 | 4 | 196 | 9.16e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0503790 | AT1G49475.1 | 32.308 | 130 | 80 | 3 | 253 | 376 | 37 | 164 | 9.68e-14 | 70.1 |
Msa0503790 | AT3G18990.1 | 30.833 | 120 | 71 | 2 | 259 | 366 | 15 | 134 | 1.53e-13 | 72.4 |
Msa0503790 | AT3G18990.2 | 30.833 | 120 | 71 | 2 | 259 | 366 | 15 | 134 | 2.97e-13 | 71.6 |
Msa0503790 | AT4G01580.1 | 35.780 | 109 | 66 | 2 | 259 | 365 | 39 | 145 | 1.94e-12 | 66.6 |
Msa0503790 | AT3G18960.3 | 37.662 | 77 | 48 | 0 | 258 | 334 | 1 | 77 | 1.04e-11 | 63.9 |
Msa0503790 | AT3G18960.2 | 35.789 | 95 | 57 | 2 | 262 | 355 | 42 | 133 | 1.33e-11 | 64.3 |
Msa0503790 | AT3G18960.1 | 38.158 | 76 | 47 | 0 | 259 | 334 | 39 | 114 | 1.73e-11 | 64.3 |
Find 124 sgRNAs with CRISPR-Local
Find 740 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTCTCCTTGTAAACTTATT+TGG | 0.150133 | 3_4:-47374022 | None:intergenic |
TAATGAATCACTTGAGATTT+TGG | 0.173823 | 3_4:+47374315 | Msa0503790:CDS |
CAGTGTGTACCAACTTTAAA+TGG | 0.174261 | 3_4:+47383857 | Msa0503790:intron |
TCCACTTTCACTTGCAAATA+AGG | 0.174829 | 3_4:-47374981 | None:intergenic |
GTACTAAATGGAAAGTTTAT+TGG | 0.221899 | 3_4:+47381323 | Msa0503790:CDS |
GCACTAAATGGAAAGTTTAT+TGG | 0.240506 | 3_4:+47374089 | Msa0503790:CDS |
CAGTATGTACCAGCTTTAAA+TGG | 0.241111 | 3_4:+47374842 | Msa0503790:intron |
CGACCACATAAGAAAGTTAA+AGG | 0.255678 | 3_4:+47374391 | Msa0503790:CDS |
AGGCTCCTGATGGCACTAAA+TGG | 0.303104 | 3_4:+47374077 | Msa0503790:CDS |
CTCTCTTGGACATGGCTGTT+TGG | 0.307883 | 3_4:+47381405 | Msa0503790:CDS |
AGAAAATCAATGGTGAGATT+TGG | 0.311173 | 3_4:+47374113 | Msa0503790:CDS |
AATCTATTTCTAGTGCATTC+TGG | 0.312600 | 3_4:-47374243 | None:intergenic |
TGTGACCCTTATGATGATAA+AGG | 0.328005 | 3_4:+47374274 | Msa0503790:CDS |
AGAGTCCTGATGGTACTAAA+TGG | 0.342374 | 3_4:+47381311 | Msa0503790:CDS |
CTCTCTAGGACATGGGTGTT+TGG | 0.346409 | 3_4:+47374171 | Msa0503790:intron |
ACACTTTCCTTTCCATCAAA+TGG | 0.348178 | 3_4:+47384167 | Msa0503790:three_prime_UTR |
ACTGATAAACAAGAATGATT+TGG | 0.354823 | 3_4:+47384048 | Msa0503790:CDS |
GATACATTAACGGTCACTTT+TGG | 0.356442 | 3_4:-47384089 | None:intergenic |
ACTTTACTTCACCCATTTGA+TGG | 0.359720 | 3_4:-47384179 | None:intergenic |
TTTCGAGTACTCTTCTGATT+TGG | 0.361974 | 3_4:-47374346 | None:intergenic |
GACCACTTTCTCTTGCAAAC+AGG | 0.362637 | 3_4:-47383997 | None:intergenic |
TTTACTGAAAATTACTCTCT+TGG | 0.363298 | 3_4:+47381391 | Msa0503790:CDS |
ACATTCCCTTTATCATCATA+AGG | 0.367605 | 3_4:-47374280 | None:intergenic |
TGGTGAGATTTGGTTTGAAA+AGG | 0.373936 | 3_4:+47381357 | Msa0503790:CDS |
CTACTCATCTAGCAGAAAAT+CGG | 0.375195 | 3_4:+47383731 | Msa0503790:CDS |
ACTTATAAACAAGAAAGATT+TGG | 0.379481 | 3_4:+47375033 | Msa0503790:CDS |
TGTCTCCTTGTAAACTCATT+TGG | 0.382989 | 3_4:-47381256 | None:intergenic |
CCACTTTCACTTGCAAATAA+GGG | 0.393272 | 3_4:-47374980 | None:intergenic |
AAAGAACTACATCATGGAAT+TGG | 0.395138 | 3_4:+47383632 | Msa0503790:CDS |
AAGTGAAAGTGGACTGCAAC+CGG | 0.397253 | 3_4:+47374991 | Msa0503790:CDS |
ACATTTCTAGCCTCACAATA+AGG | 0.400255 | 3_4:-47383950 | None:intergenic |
TTGGTAATGTTCAAATATAA+AGG | 0.407584 | 3_4:+47374190 | Msa0503790:CDS |
TCCTGAGCTCTAGCTCCCTT+TGG | 0.408256 | 3_4:-47374631 | None:intergenic |
TCCTGAGCTCTAGCTCCCTT+TGG | 0.408256 | 3_4:-47383655 | None:intergenic |
AGTATGTCATGTTGCAGATT+GGG | 0.410102 | 3_4:+47374885 | Msa0503790:CDS |
CACTTTCCTTTCCATCAAAT+GGG | 0.413114 | 3_4:+47384168 | Msa0503790:three_prime_UTR |
CTACTCATCTAGTAGAAAAT+CGG | 0.415404 | 3_4:+47374707 | Msa0503790:CDS |
AGTATGTACCAGCTTTAAAT+GGG | 0.425891 | 3_4:+47374843 | Msa0503790:intron |
GAAGAACTACATCATGGAAT+TGG | 0.429478 | 3_4:+47374608 | Msa0503790:CDS |
TGTGGTCGAGGATAAAATAA+TGG | 0.434350 | 3_4:-47374376 | None:intergenic |
CATTCCCTTTATCATCATAA+GGG | 0.438531 | 3_4:-47374279 | None:intergenic |
ACTTTCCATTTAGTGCCATC+AGG | 0.440549 | 3_4:-47374082 | None:intergenic |
AATGGTCGCCGCCTTTCGGC+CGG | 0.442339 | 3_4:+47374953 | Msa0503790:CDS |
ATACCTTTAACTTTCTTATG+TGG | 0.443654 | 3_4:-47374394 | None:intergenic |
TGGTGAGATTTGGTTTGAAA+GGG | 0.445670 | 3_4:+47374123 | Msa0503790:CDS |
TCAATAACCCCATTTAAAGT+TGG | 0.446011 | 3_4:-47383866 | None:intergenic |
GAAGAGTAATCTTGAAGAAA+CGG | 0.454080 | 3_4:-47373647 | None:intergenic |
AGTGTGTACCAACTTTAAAT+GGG | 0.455268 | 3_4:+47383858 | Msa0503790:intron |
CCCTTATTTGCAAGTGAAAG+TGG | 0.457209 | 3_4:+47374980 | Msa0503790:CDS |
GTGACCCTTATGATGATAAA+GGG | 0.462847 | 3_4:+47374275 | Msa0503790:CDS |
TCTTGCAAACAGGGACCAAC+CGG | 0.463890 | 3_4:-47383987 | None:intergenic |
ATGGTGAGATTTGGTTTGAA+AGG | 0.464155 | 3_4:+47374122 | Msa0503790:CDS |
AGATTTGGTTTGAAAAGGGT+TGG | 0.470784 | 3_4:+47381362 | Msa0503790:CDS |
AGTAAAGTAACCCTCAGCTT+TGG | 0.474694 | 3_4:+47384194 | Msa0503790:three_prime_UTR |
CATCCAAACAGATACATTAA+CGG | 0.478205 | 3_4:-47384099 | None:intergenic |
ACTTTCCATTTAGTACCATC+AGG | 0.482876 | 3_4:-47381316 | None:intergenic |
TGACCGTTAATGTATCTGTT+TGG | 0.485021 | 3_4:+47384096 | Msa0503790:exon |
CTCTTCAAACTAATCTTCAA+AGG | 0.487289 | 3_4:+47373664 | Msa0503790:CDS |
AATGTTCGCCGCCTCTCGGC+CGG | 0.489655 | 3_4:+47383968 | Msa0503790:CDS |
TTGGTGGTGTTTGAATATAA+AGG | 0.491592 | 3_4:+47381424 | Msa0503790:CDS |
AGTATGTGATGCTGCAGATT+GGG | 0.492313 | 3_4:+47383900 | Msa0503790:CDS |
AAGTATGTCATGTTGCAGAT+TGG | 0.493738 | 3_4:+47374884 | Msa0503790:CDS |
ACTTCACCCATTTGATGGAA+AGG | 0.494319 | 3_4:-47384174 | None:intergenic |
GGTGAGATTTGGTTTGAAAA+GGG | 0.495938 | 3_4:+47381358 | Msa0503790:CDS |
TTAACTTTCTTATGTGGTCG+AGG | 0.501785 | 3_4:-47374388 | None:intergenic |
ACCACTTTCTCTTGCAAACA+GGG | 0.504654 | 3_4:-47383996 | None:intergenic |
TCTTGGACATGGCTGTTTGG+TGG | 0.505898 | 3_4:+47381408 | Msa0503790:CDS |
TGCAGATTGGGAAAAGATCA+TGG | 0.514999 | 3_4:+47374897 | Msa0503790:CDS |
GTTTATTGGAAGAAAATCAA+TGG | 0.517633 | 3_4:+47374103 | Msa0503790:CDS |
AAGAAATACATGCCTCATGA+TGG | 0.521389 | 3_4:-47384256 | None:intergenic |
GTCAAATCCAGTGTTGATCA+AGG | 0.523444 | 3_4:+47374057 | Msa0503790:CDS |
TCAATAACCCCATTTAAAGC+TGG | 0.523790 | 3_4:-47374851 | None:intergenic |
TAGAAATGTTCGCCGCCTCT+CGG | 0.526048 | 3_4:+47383964 | Msa0503790:CDS |
TACTCATCTAGCAGAAAATC+GGG | 0.527511 | 3_4:+47383732 | Msa0503790:CDS |
ACATCATGGAATTGGCCAAA+GGG | 0.541191 | 3_4:+47374616 | Msa0503790:CDS |
ACATCATGGAATTGGCCAAA+GGG | 0.541191 | 3_4:+47383640 | Msa0503790:CDS |
ATGGTCGCCGCCTTTCGGCC+GGG | 0.543493 | 3_4:+47374954 | Msa0503790:CDS |
AGAGAAAGTGGTCTGCAAGT+AGG | 0.546476 | 3_4:+47384007 | Msa0503790:CDS |
TCCCTGTTTGCAAGAGAAAG+TGG | 0.549015 | 3_4:+47383995 | Msa0503790:CDS |
GCCAAAGGGAGCTAGAGCTC+AGG | 0.549833 | 3_4:+47374630 | Msa0503790:CDS |
GCCAAAGGGAGCTAGAGCTC+AGG | 0.549833 | 3_4:+47383654 | Msa0503790:CDS |
TTCGCCGCCTCTCGGCCGGT+TGG | 0.551560 | 3_4:+47383972 | Msa0503790:CDS |
ATAAGGGCCACCCGGCCGAA+AGG | 0.554116 | 3_4:-47374964 | None:intergenic |
AAATACCAAATGAGTTTACA+AGG | 0.560882 | 3_4:+47381251 | Msa0503790:CDS |
TGCAGATTGGGAAAAGATCA+TGG | 0.571416 | 3_4:+47383912 | Msa0503790:CDS |
TCAGGAGCCTTGATCAACAC+TGG | 0.571427 | 3_4:-47374064 | None:intergenic |
TCAGGACTCTTGATCAACAC+TGG | 0.571999 | 3_4:-47381298 | None:intergenic |
AAATACCAAATAAGTTTACA+AGG | 0.573284 | 3_4:+47374017 | Msa0503790:CDS |
CTAATCAAAGAACTACATCA+TGG | 0.573456 | 3_4:+47383626 | Msa0503790:CDS |
TCAAAGACACAAACATCTCC+CGG | 0.574986 | 3_4:-47375010 | None:intergenic |
AAGTATGTGATGCTGCAGAT+TGG | 0.577298 | 3_4:+47383899 | Msa0503790:CDS |
AAACTACATCATCCATGGCT+AGG | 0.578515 | 3_4:+47373604 | None:intergenic |
CTTGAAGAAACGGATGGGGA+GGG | 0.581283 | 3_4:-47373637 | None:intergenic |
AGGGCCACCCGGCCGAAAGG+CGG | 0.581670 | 3_4:-47374961 | None:intergenic |
AAAATTGCTGCCTTGTTGCG+AGG | 0.586776 | 3_4:+47374925 | Msa0503790:CDS |
GGGACCAACCGGCCGAGAGG+CGG | 0.587468 | 3_4:-47383976 | None:intergenic |
TCTTGAAGAAACGGATGGGG+AGG | 0.587791 | 3_4:-47373638 | None:intergenic |
TACAACTAAAACCAAAGCTG+AGG | 0.589819 | 3_4:-47384205 | None:intergenic |
AGTAATCTTGAAGAAACGGA+TGG | 0.591156 | 3_4:-47373643 | None:intergenic |
GGTAGCATTTCTCCTAGCCA+TGG | 0.591389 | 3_4:-47373616 | None:intergenic |
AAAATTACTCTCTAGGACAT+GGG | 0.591995 | 3_4:+47374164 | Msa0503790:intron |
GTAATCTTGAAGAAACGGAT+GGG | 0.595012 | 3_4:-47373642 | None:intergenic |
AGTGAAAGTGGACTGCAACC+GGG | 0.600057 | 3_4:+47374992 | Msa0503790:CDS |
ACTTGCAAATAAGGGCCACC+CGG | 0.602205 | 3_4:-47374972 | None:intergenic |
CTAGTGGAAGAACTACATCA+TGG | 0.603212 | 3_4:+47374602 | Msa0503790:CDS |
GTGTTGATCAAGAGTCCTGA+TGG | 0.607925 | 3_4:+47381301 | Msa0503790:CDS |
TACATCATGGAATTGGCCAA+AGG | 0.610272 | 3_4:+47374615 | Msa0503790:CDS |
TACATCATGGAATTGGCCAA+AGG | 0.610272 | 3_4:+47383639 | Msa0503790:CDS |
TTTACAAGGAGACATGAAGT+TGG | 0.611434 | 3_4:+47374031 | Msa0503790:CDS |
GTGTTGATCAAGGCTCCTGA+TGG | 0.612633 | 3_4:+47374067 | Msa0503790:CDS |
GATGATGAAAATGACAATGT+TGG | 0.615278 | 3_4:+47381520 | Msa0503790:CDS |
GAAACTGCTTCCTTATTGTG+AGG | 0.617392 | 3_4:+47383940 | Msa0503790:CDS |
TAATCTTGAAGAAACGGATG+GGG | 0.628249 | 3_4:-47373641 | None:intergenic |
GAAAATTACTCTCTTGGACA+TGG | 0.632483 | 3_4:+47381397 | Msa0503790:CDS |
GGTGAGATTTGGTTTGAAAG+GGG | 0.635152 | 3_4:+47374124 | Msa0503790:CDS |
ACAGGGACCAACCGGCCGAG+AGG | 0.636650 | 3_4:-47383979 | None:intergenic |
AATGAGTTTACAAGGAGACA+TGG | 0.642216 | 3_4:+47381259 | Msa0503790:CDS |
ACAACTAAAACCAAAGCTGA+GGG | 0.642643 | 3_4:-47384204 | None:intergenic |
TTGAACTGTAGTCCATCATG+AGG | 0.643572 | 3_4:+47384244 | Msa0503790:three_prime_UTR |
GTCGCCGCCTTTCGGCCGGG+TGG | 0.644521 | 3_4:+47374957 | Msa0503790:CDS |
GTGTGTACCAACTTTAAATG+GGG | 0.652978 | 3_4:+47383859 | Msa0503790:intron |
TCATCTAGTAGAAAATCGGA+TGG | 0.665001 | 3_4:+47374711 | Msa0503790:CDS |
GTATGTACCAGCTTTAAATG+GGG | 0.686003 | 3_4:+47374844 | Msa0503790:intron |
TCATCTAGCAGAAAATCGGG+TGG | 0.692960 | 3_4:+47383735 | Msa0503790:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAGATAAAAAAAAATAG+AGG | - | chr3_4:47375944-47375963 | None:intergenic | 10.0% |
!!! | ATAAATTAACGATTATTTTA+TGG | + | chr3_4:47376097-47376116 | Msa0503790:intron | 10.0% |
!!! | TAAATTAACGATTATTTTAT+GGG | + | chr3_4:47376098-47376117 | Msa0503790:intron | 10.0% |
!! | ATTAAAAAAATTATTCAATG+TGG | - | chr3_4:47378215-47378234 | None:intergenic | 10.0% |
!!! | ATAAAGTAATTTTTTACATT+TGG | + | chr3_4:47378403-47378422 | Msa0503790:intron | 10.0% |
!!! | TAAAGTAATTTTTTACATTT+GGG | + | chr3_4:47378404-47378423 | Msa0503790:intron | 10.0% |
!!! | ATTTTATTATTATTTTGATG+AGG | + | chr3_4:47380225-47380244 | Msa0503790:intron | 10.0% |
!! | ATAAATGAAAAAAATTTAGA+AGG | - | chr3_4:47382659-47382678 | None:intergenic | 10.0% |
!! | TAAAATCAAATGTATATTTA+GGG | + | chr3_4:47383294-47383313 | Msa0503790:intron | 10.0% |
!! | AAAATAAAAATATAGCATGT+TGG | - | chr3_4:47373715-47373734 | None:intergenic | 15.0% |
!! | TGTTAAAATGAAAAATGAAT+AGG | + | chr3_4:47375295-47375314 | Msa0503790:intron | 15.0% |
!! | GTTAAAATGAAAAATGAATA+GGG | + | chr3_4:47375296-47375315 | Msa0503790:intron | 15.0% |
!! | TTAAAATGAAAAATGAATAG+GGG | + | chr3_4:47375297-47375316 | Msa0503790:intron | 15.0% |
!! | ACAACAAAATAGATAAAAAT+GGG | - | chr3_4:47375977-47375996 | None:intergenic | 15.0% |
!! | AACAACAAAATAGATAAAAA+TGG | - | chr3_4:47375978-47375997 | None:intergenic | 15.0% |
!!! | TTTTTATCTATTTTGTTGTT+TGG | + | chr3_4:47375978-47375997 | Msa0503790:intron | 15.0% |
!! | AATACCTTATTCAAAATAAT+TGG | - | chr3_4:47376565-47376584 | None:intergenic | 15.0% |
!!! | TTTTTTTGAAAAAGCTAAAA+AGG | + | chr3_4:47376748-47376767 | Msa0503790:intron | 15.0% |
!! | AAAAAATCTTAAAAACCTAT+AGG | + | chr3_4:47376900-47376919 | Msa0503790:intron | 15.0% |
!!! | TATTGAGATTTAAAATGATA+TGG | - | chr3_4:47378732-47378751 | None:intergenic | 15.0% |
!!! | TCTTTTGATCATTTAATATA+TGG | - | chr3_4:47378802-47378821 | None:intergenic | 15.0% |
!!! | TGTTTTATTGTTTTATTTTC+TGG | - | chr3_4:47379029-47379048 | None:intergenic | 15.0% |
!! | TATAATTCTTGTGTTAATTT+AGG | - | chr3_4:47379443-47379462 | None:intergenic | 15.0% |
!!! | AAGAAACAAATTTTATTGAA+AGG | + | chr3_4:47379967-47379986 | Msa0503790:intron | 15.0% |
!!! | TAAGAGAGTAATTATATTTT+AGG | + | chr3_4:47380406-47380425 | Msa0503790:intron | 15.0% |
!!! | AAGAGAGTAATTATATTTTA+GGG | + | chr3_4:47380407-47380426 | Msa0503790:intron | 15.0% |
!!! | CATAAGTTTTTATTTATAGA+AGG | + | chr3_4:47381170-47381189 | Msa0503790:intron | 15.0% |
!! | ATACACTCATTAATAAAAAA+TGG | + | chr3_4:47381703-47381722 | Msa0503790:intron | 15.0% |
!! | TAAAATAATAAAATGCAAGA+GGG | - | chr3_4:47382364-47382383 | None:intergenic | 15.0% |
!!! | TGCATTTTATTATTTTACTT+TGG | + | chr3_4:47382367-47382386 | Msa0503790:intron | 15.0% |
!!! | GCATTTTATTATTTTACTTT+GGG | + | chr3_4:47382368-47382387 | Msa0503790:intron | 15.0% |
!! | CTAAAATCAAATGTATATTT+AGG | + | chr3_4:47383293-47383312 | Msa0503790:intron | 15.0% |
!! | AAAATCAAATGTATATTTAG+GGG | + | chr3_4:47383295-47383314 | Msa0503790:intron | 15.0% |
!!! | ATTTAATTTAGGGTTAAATA+AGG | - | chr3_4:47383329-47383348 | None:intergenic | 15.0% |
!! | TTATTTAACCCTAAATTAAA+TGG | + | chr3_4:47383328-47383347 | Msa0503790:intron | 15.0% |
!! | AAATACCAAATAAGTTTACA+AGG | + | chr3_4:47374017-47374036 | Msa0503790:CDS | 20.0% |
!!! | TTGGTAATGTTCAAATATAA+AGG | + | chr3_4:47374190-47374209 | Msa0503790:CDS | 20.0% |
!!! | TGTTTTCAGGTTATTTTTTT+GGG | - | chr3_4:47374480-47374499 | None:intergenic | 20.0% |
!!! | ATGTTTTCAGGTTATTTTTT+TGG | - | chr3_4:47374481-47374500 | None:intergenic | 20.0% |
!! | TTTATGAGAATTGTGAAAAA+AGG | - | chr3_4:47374685-47374704 | None:intergenic | 20.0% |
!! | ACTTATAAACAAGAAAGATT+TGG | + | chr3_4:47375033-47375052 | Msa0503790:CDS | 20.0% |
!! | CAGTAATATATGTATCAAAT+GGG | + | chr3_4:47375126-47375145 | Msa0503790:intron | 20.0% |
!! | ATGATATACTATTTGAACTA+TGG | + | chr3_4:47375188-47375207 | Msa0503790:intron | 20.0% |
!!! | GACTTTTACATTAGAAAAAA+TGG | - | chr3_4:47375327-47375346 | None:intergenic | 20.0% |
!!! | AGCTATTTTTGAATTCTATT+CGG | - | chr3_4:47375391-47375410 | None:intergenic | 20.0% |
!! | CAACTGAATATAATAATGTT+TGG | - | chr3_4:47375472-47375491 | None:intergenic | 20.0% |
!! | CAAACATTATTATATTCAGT+TGG | + | chr3_4:47375470-47375489 | Msa0503790:intron | 20.0% |
!!! | TGAAGATTTAAGTTTTTCTT+TGG | + | chr3_4:47375658-47375677 | Msa0503790:intron | 20.0% |
!!! | ATCATTTTTCATTGCTTATA+AGG | + | chr3_4:47376160-47376179 | Msa0503790:intron | 20.0% |
!!! | TCATTTTTCATTGCTTATAA+GGG | + | chr3_4:47376161-47376180 | Msa0503790:intron | 20.0% |
!!! | TGTTCCAATTATTTTGAATA+AGG | + | chr3_4:47376558-47376577 | Msa0503790:intron | 20.0% |
!!! | ATTTTTTTTCTTTGATTCAC+AGG | - | chr3_4:47376887-47376906 | None:intergenic | 20.0% |
!!! | GTGTTTCTATTTATTGATTT+CGG | - | chr3_4:47376952-47376971 | None:intergenic | 20.0% |
!!! | TGTTGTGTAAGTTTTTAATT+TGG | - | chr3_4:47377108-47377127 | None:intergenic | 20.0% |
!! | TTAGAAATAACGATATCATT+TGG | - | chr3_4:47377939-47377958 | None:intergenic | 20.0% |
!!! | TTGTGATTGTTTTAATGTTT+AGG | - | chr3_4:47377984-47378003 | None:intergenic | 20.0% |
!!! | ATTTTCCAATCGTTTAAATT+AGG | + | chr3_4:47378029-47378048 | Msa0503790:intron | 20.0% |
!!! | GTTGATCTTTTAAATATCAA+TGG | + | chr3_4:47378329-47378348 | Msa0503790:intron | 20.0% |
!!! | TAATTTTTTACATTTGGGAT+GGG | + | chr3_4:47378409-47378428 | Msa0503790:intron | 20.0% |
!! | AGAAGAGAAAACTATTTATA+TGG | + | chr3_4:47379069-47379088 | Msa0503790:intron | 20.0% |
!! | GAAGAGAAAACTATTTATAT+GGG | + | chr3_4:47379070-47379089 | Msa0503790:intron | 20.0% |
!!! | TTTGTTTTACAAGTTATCAA+TGG | - | chr3_4:47379409-47379428 | None:intergenic | 20.0% |
!!! | GTTTTAATCCAAATTTGAAA+TGG | + | chr3_4:47379838-47379857 | Msa0503790:intron | 20.0% |
!!! | GTTTTATTACTATTTTGATG+AGG | - | chr3_4:47380095-47380114 | None:intergenic | 20.0% |
!!! | TCAAAGTAATCATATTTTAG+TGG | - | chr3_4:47380442-47380461 | None:intergenic | 20.0% |
!! | ACTAAAATATGATTACTTTG+AGG | + | chr3_4:47380441-47380460 | Msa0503790:intron | 20.0% |
!! | AAAAAAATGGGAAAAAAAGT+TGG | - | chr3_4:47380493-47380512 | None:intergenic | 20.0% |
!! | AGAAGAAGAAGAAAAAAAAT+GGG | - | chr3_4:47380505-47380524 | None:intergenic | 20.0% |
!! | AAGAAGAAGAAGAAAAAAAA+TGG | - | chr3_4:47380506-47380525 | None:intergenic | 20.0% |
!!! | TTTTAATGACAATAGCAAAT+AGG | + | chr3_4:47380772-47380791 | Msa0503790:intron | 20.0% |
!! | ATAACTCTAAATTGTAGAAA+TGG | - | chr3_4:47381059-47381078 | None:intergenic | 20.0% |
!! | AAGTTTGATGTATTAATACT+TGG | + | chr3_4:47381454-47381473 | Msa0503790:intron | 20.0% |
!!! | ATGTTATGGCATTTAATTTT+TGG | - | chr3_4:47382062-47382081 | None:intergenic | 20.0% |
!! | GTAAAAATAAGGATATGTTA+TGG | - | chr3_4:47382076-47382095 | None:intergenic | 20.0% |
!!! | AATGCTTGTTTTACTTTTTT+AGG | - | chr3_4:47382304-47382323 | None:intergenic | 20.0% |
!! | GTAAAATAATAAAATGCAAG+AGG | - | chr3_4:47382365-47382384 | None:intergenic | 20.0% |
!! | AGAGAATAATACCTAATAAA+GGG | - | chr3_4:47382464-47382483 | None:intergenic | 20.0% |
!!! | CTTTTCAATATCATTATTGA+AGG | + | chr3_4:47382505-47382524 | Msa0503790:intron | 20.0% |
!!! | ATTTATCCCTTTAATTTAAG+TGG | - | chr3_4:47382565-47382584 | None:intergenic | 20.0% |
!! | TCAAATGTTGGTATATTTAA+GGG | - | chr3_4:47382600-47382619 | None:intergenic | 20.0% |
!! | ATCAAATGTTGGTATATTTA+AGG | - | chr3_4:47382601-47382620 | None:intergenic | 20.0% |
!!! | TTTTGGCTTAATTAATGATT+TGG | + | chr3_4:47382902-47382921 | Msa0503790:intron | 20.0% |
!! | TTGTAACGTTAATAACTTAT+GGG | - | chr3_4:47383201-47383220 | None:intergenic | 20.0% |
!! | ATTGTAACGTTAATAACTTA+TGG | - | chr3_4:47383200-47383219 | None:intergenic | 20.0% |
!! | AAGTTATTAACGTTACAATT+TGG | + | chr3_4:47383022-47383041 | Msa0503790:intron | 20.0% |
!! | GAAACCAAAAAATAAGTTAA+AGG | - | chr3_4:47383141-47383160 | None:intergenic | 20.0% |
!! | CTTTATGTTATTAGAGTTAA+GGG | + | chr3_4:47383110-47383129 | Msa0503790:intron | 20.0% |
!! | GAAACCAAAAAATAAGTTAA+GGG | + | chr3_4:47383141-47383160 | Msa0503790:intron | 20.0% |
!! | AAGTTATTAACGTTACAATT+TGG | - | chr3_4:47383022-47383041 | None:intergenic | 20.0% |
!! | ATTGTAACGTTAATAACTTA+TGG | + | chr3_4:47383200-47383219 | Msa0503790:intron | 20.0% |
!! | TTGTAACGTTAATAACTTAT+GGG | + | chr3_4:47383201-47383220 | Msa0503790:intron | 20.0% |
!! | TTTAGGCTTAATTAATGATT+TGG | - | chr3_4:47383259-47383278 | None:intergenic | 20.0% |
!!! | TTAAGCCTAAATTTTTTTAG+AGG | + | chr3_4:47383268-47383287 | Msa0503790:intron | 20.0% |
!!! | TAAGCCTAAATTTTTTTAGA+GGG | + | chr3_4:47383269-47383288 | Msa0503790:intron | 20.0% |
!! | AAATCAAATGTATATTTAGG+GGG | + | chr3_4:47383296-47383315 | Msa0503790:intron | 20.0% |
!! | AAACCACTTACAATAAAATA+CGG | + | chr3_4:47383384-47383403 | Msa0503790:intron | 20.0% |
!! | TTTATGAGAATTGTGAAAAA+AGG | - | chr3_4:47374685-47374704 | None:intergenic | 20.0% |
! | AAGCACTAGAAATTTGATTA+GGG | + | chr3_4:47373769-47373788 | Msa0503790:intron | 25.0% |
!! | GATTAGTTGAAAATTCGTTA+TGG | + | chr3_4:47373842-47373861 | Msa0503790:intron | 25.0% |
!!! | ATGAGTGTTGTATTTTTAGA+AGG | + | chr3_4:47373923-47373942 | Msa0503790:intron | 25.0% |
! | GTTTATTGGAAGAAAATCAA+TGG | + | chr3_4:47374103-47374122 | Msa0503790:CDS | 25.0% |
! | TTTACTGAAAATTACTCTCT+AGG | + | chr3_4:47374157-47374176 | Msa0503790:intron | 25.0% |
!! | TAATGAATCACTTGAGATTT+TGG | + | chr3_4:47374315-47374334 | Msa0503790:CDS | 25.0% |
!! | ATACCTTTAACTTTCTTATG+TGG | - | chr3_4:47374397-47374416 | None:intergenic | 25.0% |
! | AACACAGAAGAAATTATTCA+AGG | - | chr3_4:47374538-47374557 | None:intergenic | 25.0% |
! | TTGAATAATTTCTTCTGTGT+TGG | + | chr3_4:47374537-47374556 | Msa0503790:intron | 25.0% |
! | CTACACAAATATATATATGC+AGG | + | chr3_4:47374565-47374584 | Msa0503790:intron | 25.0% |
! | GCAGTAATATATGTATCAAA+TGG | + | chr3_4:47375125-47375144 | Msa0503790:intron | 25.0% |
! | AATACTAAAACCAAAGTTTG+AGG | - | chr3_4:47375160-47375179 | None:intergenic | 25.0% |
! | ATTATATTCAGTTGGTTAGT+TGG | + | chr3_4:47375478-47375497 | Msa0503790:intron | 25.0% |
!! | TTATATTCAGTTGGTTAGTT+GGG | + | chr3_4:47375479-47375498 | Msa0503790:intron | 25.0% |
! | AATCTTCATCTATTTGAGAA+GGG | - | chr3_4:47375646-47375665 | None:intergenic | 25.0% |
! | AAATCTTCATCTATTTGAGA+AGG | - | chr3_4:47375647-47375666 | None:intergenic | 25.0% |
! | TAGATAAAAATGGGAAACAA+CGG | - | chr3_4:47375968-47375987 | None:intergenic | 25.0% |
! | CTTAAAAACAGAGATAATAG+AGG | - | chr3_4:47376017-47376036 | None:intergenic | 25.0% |
!!! | CTCTATTATCTCTGTTTTTA+AGG | + | chr3_4:47376015-47376034 | Msa0503790:intron | 25.0% |
!! | ATTTATAGAAGTAAGAGTAC+CGG | - | chr3_4:47376075-47376094 | None:intergenic | 25.0% |
! | TAAAAACAGGGTAAATTCTA+TGG | - | chr3_4:47376382-47376401 | None:intergenic | 25.0% |
! | AGAAAATAGAGGAAAAACAT+AGG | - | chr3_4:47376414-47376433 | None:intergenic | 25.0% |
! | GAAATAGATAGAGAAAATAG+AGG | - | chr3_4:47376425-47376444 | None:intergenic | 25.0% |
!! | CATTAGTTGATCTAAAATAG+AGG | - | chr3_4:47376491-47376510 | None:intergenic | 25.0% |
! | AATTGGAACAATATGACTTT+AGG | - | chr3_4:47376548-47376567 | None:intergenic | 25.0% |
! | AATTATACAGATGAGATGTT+CGG | - | chr3_4:47376687-47376706 | None:intergenic | 25.0% |
! | CTTAAAGTAGCAACATATAA+AGG | + | chr3_4:47376827-47376846 | Msa0503790:intron | 25.0% |
!!! | AGTTTTTAATTTGGTGTTCA+GGG | - | chr3_4:47377099-47377118 | None:intergenic | 25.0% |
!!! | AAGTTTTTAATTTGGTGTTC+AGG | - | chr3_4:47377100-47377119 | None:intergenic | 25.0% |
! | TAAAAATACTACATCAGTTG+TGG | - | chr3_4:47377621-47377640 | None:intergenic | 25.0% |
! | TTTACACGTGAGTATAATAT+AGG | + | chr3_4:47377656-47377675 | Msa0503790:intron | 25.0% |
! | TATTTGTCACATTAAGTGTT+TGG | + | chr3_4:47377723-47377742 | Msa0503790:intron | 25.0% |
! | ATTTGTCACATTAAGTGTTT+GGG | + | chr3_4:47377724-47377743 | Msa0503790:intron | 25.0% |
! | AAAATTATTCAATGTGGAGA+CGG | - | chr3_4:47378209-47378228 | None:intergenic | 25.0% |
!! | TCACTTTAACATTTGTTAGA+CGG | + | chr3_4:47378297-47378316 | Msa0503790:intron | 25.0% |
!!! | GTAATTTTTTACATTTGGGA+TGG | + | chr3_4:47378408-47378427 | Msa0503790:intron | 25.0% |
!!! | AATCTAGAACTTAATGCTTT+TGG | - | chr3_4:47378621-47378640 | None:intergenic | 25.0% |
!! | CATACTTTTGAATCTAGAAA+TGG | - | chr3_4:47378706-47378725 | None:intergenic | 25.0% |
! | ATAATGTCTCAACAAATCTT+GGG | + | chr3_4:47378935-47378954 | Msa0503790:intron | 25.0% |
! | ACAATAAAACAGTAAGTGAA+TGG | + | chr3_4:47379038-47379057 | Msa0503790:intron | 25.0% |
!! | TTGTGTTAATTTAGGCATTT+TGG | - | chr3_4:47379435-47379454 | None:intergenic | 25.0% |
!!! | TTTTTTTGTTTCGTTTGGTT+GGG | - | chr3_4:47379583-47379602 | None:intergenic | 25.0% |
!!! | TTTTTTTTGTTTCGTTTGGT+TGG | - | chr3_4:47379584-47379603 | None:intergenic | 25.0% |
! | GATGTATTCCATTTCAAATT+TGG | - | chr3_4:47379849-47379868 | None:intergenic | 25.0% |
!!! | ATGTAGATAGACTTTTGAAA+CGG | - | chr3_4:47379882-47379901 | None:intergenic | 25.0% |
! | ATCGATAATGAGAAATTCTT+AGG | + | chr3_4:47380017-47380036 | Msa0503790:intron | 25.0% |
! | ATTATCGATGAGAAATTCTT+AGG | - | chr3_4:47380303-47380322 | None:intergenic | 25.0% |
! | TAACTAAAAACCAACAAAGT+GGG | + | chr3_4:47380612-47380631 | Msa0503790:intron | 25.0% |
!! | GTAACTTGTAATGAAGTTAA+TGG | - | chr3_4:47380905-47380924 | None:intergenic | 25.0% |
! | ATGATCTTGAAAAAATGGAT+GGG | - | chr3_4:47380995-47381014 | None:intergenic | 25.0% |
! | AAATACCAAATGAGTTTACA+AGG | + | chr3_4:47381251-47381270 | Msa0503790:CDS | 25.0% |
! | GTACTAAATGGAAAGTTTAT+TGG | + | chr3_4:47381323-47381342 | Msa0503790:CDS | 25.0% |
! | GTTTATTGGAAAAAAGTCAA+TGG | + | chr3_4:47381337-47381356 | Msa0503790:CDS | 25.0% |
! | TTTACTGAAAATTACTCTCT+TGG | + | chr3_4:47374157-47374176 | Msa0503790:intron | 25.0% |
! | AAAATGAAATCCAAAGACTT+TGG | - | chr3_4:47381822-47381841 | None:intergenic | 25.0% |
!! | AAGTCTTTGGATTTCATTTT+CGG | + | chr3_4:47381822-47381841 | Msa0503790:intron | 25.0% |
! | TTGACATTATTTGGAAAGAA+AGG | - | chr3_4:47382031-47382050 | None:intergenic | 25.0% |
! | ACATGTTAAACTATCACTTA+TGG | - | chr3_4:47382242-47382261 | None:intergenic | 25.0% |
! | GTGATAGTTTAACATGTTAT+TGG | + | chr3_4:47382245-47382264 | Msa0503790:intron | 25.0% |
! | GAGAGAATAATACCTAATAA+AGG | - | chr3_4:47382465-47382484 | None:intergenic | 25.0% |
!! | CCTTTAATTTAAGTGGAAAA+GGG | - | chr3_4:47382558-47382577 | None:intergenic | 25.0% |
!! | CCTTTTCCACTTAAATTAAA+GGG | + | chr3_4:47382556-47382575 | Msa0503790:intron | 25.0% |
! | CAAATGTTGGTATATTTAAG+GGG | - | chr3_4:47382599-47382618 | None:intergenic | 25.0% |
!!! | ACGCCTAAAGAATATTTTAA+GGG | - | chr3_4:47382631-47382650 | None:intergenic | 25.0% |
!! | AACGCCTAAAGAATATTTTA+AGG | - | chr3_4:47382632-47382651 | None:intergenic | 25.0% |
! | GTAACCAACAAATAACTTAA+GGG | - | chr3_4:47383232-47383251 | None:intergenic | 25.0% |
! | TGTAACCAACAAATAACTTA+AGG | - | chr3_4:47383231-47383250 | None:intergenic | 25.0% |
!!! | GTTATTTGTTGGTTACATTT+TGG | + | chr3_4:47382933-47382952 | Msa0503790:intron | 25.0% |
! | TTGTAACGTTCATAACTTAT+GGG | - | chr3_4:47382960-47382979 | None:intergenic | 25.0% |
! | ATTGTAACGTTCATAACTTA+TGG | - | chr3_4:47382961-47382980 | None:intergenic | 25.0% |
! | AAGTTATGAACGTTACAATT+TGG | + | chr3_4:47382962-47382981 | Msa0503790:intron | 25.0% |
! | GTAACCAACAAATAACTTAA+GGG | - | chr3_4:47383232-47383251 | None:intergenic | 25.0% |
! | TGTAACCAACAAATAACTTA+AGG | - | chr3_4:47383231-47383250 | None:intergenic | 25.0% |
!!! | GTTATTTGTTGGTTACATTT+TGG | + | chr3_4:47382933-47382952 | Msa0503790:intron | 25.0% |
!!! | TGGTCCTTTAACTTATTTTT+TGG | + | chr3_4:47383042-47383061 | Msa0503790:intron | 25.0% |
!!! | CTTATTTTTTGGTTTCGTTT+TGG | + | chr3_4:47383053-47383072 | Msa0503790:intron | 25.0% |
! | CCTTAACTCTAATAACATAA+AGG | - | chr3_4:47383112-47383131 | None:intergenic | 25.0% |
! | CCTTTATGTTATTAGAGTTA+AGG | + | chr3_4:47383109-47383128 | Msa0503790:intron | 25.0% |
! | CGAAACCAAAAAATAAGTTA+AGG | + | chr3_4:47383140-47383159 | Msa0503790:intron | 25.0% |
! | GAAACCAAAAAGTAAGTTAA+GGG | + | chr3_4:47383172-47383191 | Msa0503790:intron | 25.0% |
!!! | GTTATTTGTTGGTTACATTT+TGG | - | chr3_4:47382933-47382952 | None:intergenic | 25.0% |
! | TGTAACCAACAAATAACTTA+AGG | + | chr3_4:47383231-47383250 | Msa0503790:intron | 25.0% |
! | GTAACCAACAAATAACTTAA+GGG | + | chr3_4:47383232-47383251 | Msa0503790:intron | 25.0% |
!! | TAGTCCCTCTAAAAAAATTT+AGG | - | chr3_4:47383276-47383295 | None:intergenic | 25.0% |
!! | TTTAGGGTTAAATAAGGAAA+TGG | - | chr3_4:47383323-47383342 | None:intergenic | 25.0% |
!! | CGTAGAATCCATTTAATTTA+GGG | - | chr3_4:47383339-47383358 | None:intergenic | 25.0% |
!! | ACGTAGAATCCATTTAATTT+AGG | - | chr3_4:47383340-47383359 | None:intergenic | 25.0% |
!! | TATCCGTATTTTATTGTAAG+TGG | - | chr3_4:47383390-47383409 | None:intergenic | 25.0% |
! | ACTGATAAACAAGAATGATT+TGG | + | chr3_4:47384048-47384067 | Msa0503790:CDS | 25.0% |
GAAGAGTAATCTTGAAGAAA+CGG | - | chr3_4:47373650-47373669 | None:intergenic | 30.0% | |
CTCTTCAAACTAATCTTCAA+AGG | + | chr3_4:47373664-47373683 | Msa0503790:CDS | 30.0% | |
AGCATGTTGGAAATCTAAAT+AGG | - | chr3_4:47373702-47373721 | None:intergenic | 30.0% | |
CAAGCACTAGAAATTTGATT+AGG | + | chr3_4:47373768-47373787 | Msa0503790:intron | 30.0% | |
TGTCTCCTTGTAAACTTATT+TGG | - | chr3_4:47374025-47374044 | None:intergenic | 30.0% | |
GCACTAAATGGAAAGTTTAT+TGG | + | chr3_4:47374089-47374108 | Msa0503790:CDS | 30.0% | |
AGAAAATCAATGGTGAGATT+TGG | + | chr3_4:47374113-47374132 | Msa0503790:CDS | 30.0% | |
!! | AAAATTACTCTCTAGGACAT+GGG | + | chr3_4:47374164-47374183 | Msa0503790:intron | 30.0% |
!! | AATCTATTTCTAGTGCATTC+TGG | - | chr3_4:47374246-47374265 | None:intergenic | 30.0% |
CATTCCCTTTATCATCATAA+GGG | - | chr3_4:47374282-47374301 | None:intergenic | 30.0% | |
ACATTCCCTTTATCATCATA+AGG | - | chr3_4:47374283-47374302 | None:intergenic | 30.0% | |
AGAGATCAGTTTAAACTTCA+GGG | - | chr3_4:47374444-47374463 | None:intergenic | 30.0% | |
AAGAGATCAGTTTAAACTTC+AGG | - | chr3_4:47374445-47374464 | None:intergenic | 30.0% | |
! | TCATGATGCTTAATGTTTTC+AGG | - | chr3_4:47374493-47374512 | None:intergenic | 30.0% |
! | GATTTTCTACTAGATGAGTA+GGG | - | chr3_4:47374708-47374727 | None:intergenic | 30.0% |
CTACTCATCTAGTAGAAAAT+CGG | + | chr3_4:47374707-47374726 | Msa0503790:CDS | 30.0% | |
!! | AGTATGTACCAGCTTTAAAT+GGG | + | chr3_4:47374843-47374862 | Msa0503790:intron | 30.0% |
!!! | AACTGTCACTTTTGTAGATA+TGG | - | chr3_4:47375069-47375088 | None:intergenic | 30.0% |
AAGAAATTCATGCCTTATGA+TGG | - | chr3_4:47375215-47375234 | None:intergenic | 30.0% | |
! | TATATTCAGTTGGTTAGTTG+GGG | + | chr3_4:47375480-47375499 | Msa0503790:intron | 30.0% |
ATTCTTTCCTATACTTTGAG+AGG | + | chr3_4:47375619-47375638 | Msa0503790:intron | 30.0% | |
ATAGAGGAAACAGAGAAAAA+GGG | - | chr3_4:47375928-47375947 | None:intergenic | 30.0% | |
AATAGAGGAAACAGAGAAAA+AGG | - | chr3_4:47375929-47375948 | None:intergenic | 30.0% | |
AGATAATAGAGGAAAAAGAG+AGG | - | chr3_4:47376006-47376025 | None:intergenic | 30.0% | |
!!! | CTGTTTTTAAGGAACTTCTA+CGG | + | chr3_4:47376026-47376045 | Msa0503790:intron | 30.0% |
CCTCATAAATTAAGGTATAC+CGG | + | chr3_4:47376053-47376072 | Msa0503790:intron | 30.0% | |
! | TACCTGTACACTCAAATTTT+TGG | + | chr3_4:47376351-47376370 | Msa0503790:intron | 30.0% |
ATCCAAAAATTTGAGTGTAC+AGG | - | chr3_4:47376356-47376375 | None:intergenic | 30.0% | |
AGCAACATATAAAGGATAGA+TGG | + | chr3_4:47376835-47376854 | Msa0503790:intron | 30.0% | |
GCAACATATAAAGGATAGAT+GGG | + | chr3_4:47376836-47376855 | Msa0503790:intron | 30.0% | |
CAACATATAAAGGATAGATG+GGG | + | chr3_4:47376837-47376856 | Msa0503790:intron | 30.0% | |
!!! | TTTGTTTTGGTGCTTTGTTT+TGG | - | chr3_4:47376974-47376993 | None:intergenic | 30.0% |
!!! | GTTTTTAATTTGGTGTTCAG+GGG | - | chr3_4:47377098-47377117 | None:intergenic | 30.0% |
! | AACAACCTTTGAAAAACAAC+CGG | + | chr3_4:47377131-47377150 | Msa0503790:intron | 30.0% |
!!! | GTTTTTTCCTTGTTGTATGA+TGG | - | chr3_4:47377252-47377271 | None:intergenic | 30.0% |
!!! | TTGATGTTGCTTTTTGGTTA+GGG | - | chr3_4:47377378-47377397 | None:intergenic | 30.0% |
TTATGGTTTCGATGAATCTT+TGG | - | chr3_4:47377534-47377553 | None:intergenic | 30.0% | |
AAAGTAAAACGAGAAGAGAT+AGG | + | chr3_4:47377793-47377812 | Msa0503790:intron | 30.0% | |
AAAACAATCACAAAGTCGAT+TGG | + | chr3_4:47377991-47378010 | Msa0503790:intron | 30.0% | |
TTTAAATTAGGCATGGCAAT+TGG | + | chr3_4:47378041-47378060 | Msa0503790:intron | 30.0% | |
TTAAATTAGGCATGGCAATT+GGG | + | chr3_4:47378042-47378061 | Msa0503790:intron | 30.0% | |
AGTATAATCAAATCGGGTAT+GGG | - | chr3_4:47378099-47378118 | None:intergenic | 30.0% | |
AAGTATAATCAAATCGGGTA+TGG | - | chr3_4:47378100-47378119 | None:intergenic | 30.0% | |
ACGGGTAAGTATAATCAAAT+CGG | - | chr3_4:47378106-47378125 | None:intergenic | 30.0% | |
AAATTATTCAATGTGGAGAC+GGG | - | chr3_4:47378208-47378227 | None:intergenic | 30.0% | |
ATGTATTACAACGTTGCTAT+TGG | - | chr3_4:47378262-47378281 | None:intergenic | 30.0% | |
! | CACTTTAACATTTGTTAGAC+GGG | + | chr3_4:47378298-47378317 | Msa0503790:intron | 30.0% |
TGTCTATGATAGATTTGCAA+AGG | + | chr3_4:47378878-47378897 | Msa0503790:intron | 30.0% | |
ATTTGCAAAGGATGAAGAAA+AGG | + | chr3_4:47378890-47378909 | Msa0503790:intron | 30.0% | |
!! | CAAGATTTGTTGAGACATTA+TGG | - | chr3_4:47378936-47378955 | None:intergenic | 30.0% |
CATAATGTCTCAACAAATCT+TGG | + | chr3_4:47378934-47378953 | Msa0503790:intron | 30.0% | |
TTCGCTAATAGCGAAATATT+TGG | - | chr3_4:47379122-47379141 | None:intergenic | 30.0% | |
TCAAGAAGACAAATGGATAA+GGG | - | chr3_4:47379189-47379208 | None:intergenic | 30.0% | |
TTCAAGAAGACAAATGGATA+AGG | - | chr3_4:47379190-47379209 | None:intergenic | 30.0% | |
!! | ATTTGATTCGTTTTCTCTCT+TGG | - | chr3_4:47379490-47379509 | None:intergenic | 30.0% |
AGAAAACGAATCAAATAGTC+TGG | + | chr3_4:47379494-47379513 | Msa0503790:intron | 30.0% | |
GAAAACGAATCAAATAGTCT+GGG | + | chr3_4:47379495-47379514 | Msa0503790:intron | 30.0% | |
!!! | GGTGTTTTTTTTGTTTCGTT+TGG | - | chr3_4:47379588-47379607 | None:intergenic | 30.0% |
!!! | TAAAGGTTGGTTTGTGATTT+TGG | - | chr3_4:47379609-47379628 | None:intergenic | 30.0% |
ATGAAGAAGATTTGTGAACT+TGG | + | chr3_4:47379993-47380012 | Msa0503790:intron | 30.0% | |
!!! | GTTTTAATTGGATGAGTGTA+AGG | - | chr3_4:47380254-47380273 | None:intergenic | 30.0% |
!!! | ATGAGGTGTTCTGTTTTAAT+TGG | - | chr3_4:47380078-47380097 | None:intergenic | 30.0% |
TTAAACCGAAAGGAAATCAT+GGG | - | chr3_4:47380157-47380176 | None:intergenic | 30.0% | |
ATTAAACCGAAAGGAAATCA+TGG | - | chr3_4:47380158-47380177 | None:intergenic | 30.0% | |
GAGAGAAAAATTAAACCGAA+AGG | - | chr3_4:47380167-47380186 | None:intergenic | 30.0% | |
!!! | ATGAGGTGTTGTGTTTTAAT+TGG | + | chr3_4:47380242-47380261 | Msa0503790:intron | 30.0% |
!!! | GTTTTAATTGGATGAGTGTA+AGG | + | chr3_4:47380254-47380273 | Msa0503790:intron | 30.0% |
! | TGATTACTTTGAGGAACTAT+AGG | + | chr3_4:47380450-47380469 | Msa0503790:intron | 30.0% |
!!! | ACAGATTCATTTTTTGTTGC+AGG | - | chr3_4:47380558-47380577 | None:intergenic | 30.0% |
GTAACTAAAAACCAACAAAG+TGG | + | chr3_4:47380611-47380630 | Msa0503790:intron | 30.0% | |
AAGAGAAGAAAAATGTGCTT+TGG | + | chr3_4:47380719-47380738 | Msa0503790:intron | 30.0% | |
AGAGAAGAAAAATGTGCTTT+GGG | + | chr3_4:47380720-47380739 | Msa0503790:intron | 30.0% | |
TTGGGATCAATTAATGCAAA+AGG | + | chr3_4:47380738-47380757 | Msa0503790:intron | 30.0% | |
TTGAGCTGTTAGAAATTGTA+TGG | - | chr3_4:47380809-47380828 | None:intergenic | 30.0% | |
ACAATTTCTAACAGCTCAAT+TGG | + | chr3_4:47380810-47380829 | Msa0503790:intron | 30.0% | |
CAATTTCTAACAGCTCAATT+GGG | + | chr3_4:47380811-47380830 | Msa0503790:intron | 30.0% | |
GATGATCTTGAAAAAATGGA+TGG | - | chr3_4:47380996-47381015 | None:intergenic | 30.0% | |
! | CAAGTCTTTGAAGATTAGAT+TGG | - | chr3_4:47381021-47381040 | None:intergenic | 30.0% |
AAAAATTTAAGTGCCCAAGT+TGG | - | chr3_4:47381226-47381245 | None:intergenic | 30.0% | |
AAAAAGTCAATGGTGAGATT+TGG | + | chr3_4:47381347-47381366 | Msa0503790:CDS | 30.0% | |
!! | TTGGTGGTGTTTGAATATAA+AGG | + | chr3_4:47381424-47381443 | Msa0503790:CDS | 30.0% |
GATGATGAAAATGACAATGT+TGG | + | chr3_4:47381520-47381539 | Msa0503790:CDS | 30.0% | |
! | CAGTTGAGATTTTAGATGAA+TGG | + | chr3_4:47381560-47381579 | Msa0503790:CDS | 30.0% |
ATACCTCTTACTTTCTTATG+TGG | - | chr3_4:47381634-47381653 | None:intergenic | 30.0% | |
! | AGTAAGAGGTATGTATAGTT+AGG | + | chr3_4:47381642-47381661 | Msa0503790:intron | 30.0% |
TATAGTATGTCACACTCTAT+TGG | - | chr3_4:47381882-47381901 | None:intergenic | 30.0% | |
! | TAATTGATTAGTTAGCGTTG+TGG | + | chr3_4:47381900-47381919 | Msa0503790:intron | 30.0% |
! | AATTGATTAGTTAGCGTTGT+GGG | + | chr3_4:47381901-47381920 | Msa0503790:intron | 30.0% |
GTATAGCTCTTGACATTATT+TGG | - | chr3_4:47382040-47382059 | None:intergenic | 30.0% | |
!!! | TATCCTTATTTTTACCACAC+TGG | + | chr3_4:47382081-47382100 | Msa0503790:intron | 30.0% |
!!! | ATCCTTATTTTTACCACACT+GGG | + | chr3_4:47382082-47382101 | Msa0503790:intron | 30.0% |
ATAGTAGAGGTTTCCATAAT+TGG | - | chr3_4:47382130-47382149 | None:intergenic | 30.0% | |
ACCTCTACTATAAAAAGTTC+AGG | + | chr3_4:47382139-47382158 | Msa0503790:intron | 30.0% | |
! | TCCTGAACTTTTTATAGTAG+AGG | - | chr3_4:47382143-47382162 | None:intergenic | 30.0% |
!!! | ACTTTTTTAGGTGAAGCAAA+TGG | - | chr3_4:47382292-47382311 | None:intergenic | 30.0% |
AAAACAAGCATTCAATCTCA+TGG | + | chr3_4:47382312-47382331 | Msa0503790:intron | 30.0% | |
TTCCTATCATACCCTTTATT+AGG | + | chr3_4:47382450-47382469 | Msa0503790:intron | 30.0% | |
! | TACCTAATAAAGGGTATGAT+AGG | - | chr3_4:47382455-47382474 | None:intergenic | 30.0% |
! | CCCTTTTCCACTTAAATTAA+AGG | + | chr3_4:47382555-47382574 | Msa0503790:intron | 30.0% |
! | CCCTTTAATTTAAGTGGAAA+AGG | - | chr3_4:47382559-47382578 | None:intergenic | 30.0% |
GTCCCCTTAAAATATTCTTT+AGG | + | chr3_4:47382625-47382644 | Msa0503790:intron | 30.0% | |
!! | CGCCTAAAGAATATTTTAAG+GGG | - | chr3_4:47382630-47382649 | None:intergenic | 30.0% |
!!! | TGGTCCCTTAACTTATTTTT+TGG | - | chr3_4:47383148-47383167 | None:intergenic | 30.0% |
!!! | CTTACTTTTTGGTTTCGTTT+TGG | - | chr3_4:47383168-47383187 | None:intergenic | 30.0% |
CGAAACCAAAAAGTAAGTTA+AGG | + | chr3_4:47383171-47383190 | Msa0503790:intron | 30.0% | |
CTAATCAAAGAACTACATCA+TGG | + | chr3_4:47383626-47383645 | Msa0503790:CDS | 30.0% | |
AAAGAACTACATCATGGAAT+TGG | + | chr3_4:47383632-47383651 | Msa0503790:CDS | 30.0% | |
AGTGTGTACCAACTTTAAAT+GGG | + | chr3_4:47383858-47383877 | Msa0503790:intron | 30.0% | |
! | TCAATAACCCCATTTAAAGT+TGG | - | chr3_4:47383869-47383888 | None:intergenic | 30.0% |
CATCCAAACAGATACATTAA+CGG | - | chr3_4:47384102-47384121 | None:intergenic | 30.0% | |
TAATCTTGAAGAAACGGATG+GGG | - | chr3_4:47373644-47373663 | None:intergenic | 35.0% | |
GTAATCTTGAAGAAACGGAT+GGG | - | chr3_4:47373645-47373664 | None:intergenic | 35.0% | |
AGTAATCTTGAAGAAACGGA+TGG | - | chr3_4:47373646-47373665 | None:intergenic | 35.0% | |
TAGGGATCTGTTAGAATTAG+TGG | + | chr3_4:47373787-47373806 | Msa0503790:intron | 35.0% | |
TTTACAAGGAGACATGAAGT+TGG | + | chr3_4:47374031-47374050 | Msa0503790:CDS | 35.0% | |
!! | ATGGTGAGATTTGGTTTGAA+AGG | + | chr3_4:47374122-47374141 | Msa0503790:CDS | 35.0% |
!! | TGGTGAGATTTGGTTTGAAA+GGG | + | chr3_4:47374123-47374142 | Msa0503790:CDS | 35.0% |
!! | GAAAATTACTCTCTAGGACA+TGG | + | chr3_4:47374163-47374182 | Msa0503790:intron | 35.0% |
TGTGACCCTTATGATGATAA+AGG | + | chr3_4:47374274-47374293 | Msa0503790:CDS | 35.0% | |
GTGACCCTTATGATGATAAA+GGG | + | chr3_4:47374275-47374294 | Msa0503790:CDS | 35.0% | |
! | CACTTGAGATTTTGGATGAA+TGG | + | chr3_4:47374323-47374342 | Msa0503790:CDS | 35.0% |
! | TTTCGAGTACTCTTCTGATT+TGG | - | chr3_4:47374349-47374368 | None:intergenic | 35.0% |
TGTGGTCGAGGATAAAATAA+TGG | - | chr3_4:47374379-47374398 | None:intergenic | 35.0% | |
TTAACTTTCTTATGTGGTCG+AGG | - | chr3_4:47374391-47374410 | None:intergenic | 35.0% | |
CGACCACATAAGAAAGTTAA+AGG | + | chr3_4:47374391-47374410 | Msa0503790:CDS | 35.0% | |
GGTGACATTAAAAAGACTAG+TGG | + | chr3_4:47374586-47374605 | Msa0503790:intron | 35.0% | |
GAAGAACTACATCATGGAAT+TGG | + | chr3_4:47374608-47374627 | Msa0503790:CDS | 35.0% | |
! | CGATTTTCTACTAGATGAGT+AGG | - | chr3_4:47374709-47374728 | None:intergenic | 35.0% |
TCATCTAGTAGAAAATCGGA+TGG | + | chr3_4:47374711-47374730 | Msa0503790:CDS | 35.0% | |
!! | CAGTATGTACCAGCTTTAAA+TGG | + | chr3_4:47374842-47374861 | Msa0503790:intron | 35.0% |
!! | GTATGTACCAGCTTTAAATG+GGG | + | chr3_4:47374844-47374863 | Msa0503790:intron | 35.0% |
! | TCAATAACCCCATTTAAAGC+TGG | - | chr3_4:47374854-47374873 | None:intergenic | 35.0% |
AAGTATGTCATGTTGCAGAT+TGG | + | chr3_4:47374884-47374903 | Msa0503790:CDS | 35.0% | |
AGTATGTCATGTTGCAGATT+GGG | + | chr3_4:47374885-47374904 | Msa0503790:CDS | 35.0% | |
CCACTTTCACTTGCAAATAA+GGG | - | chr3_4:47374983-47375002 | None:intergenic | 35.0% | |
TCCACTTTCACTTGCAAATA+AGG | - | chr3_4:47374984-47375003 | None:intergenic | 35.0% | |
TGACAGTTAATGTACCTGTT+TGG | + | chr3_4:47375081-47375100 | Msa0503790:intron | 35.0% | |
CAAAACAACAACATCCAAAC+AGG | - | chr3_4:47375098-47375117 | None:intergenic | 35.0% | |
TTGAACTATGGTCCATCATA+AGG | + | chr3_4:47375200-47375219 | Msa0503790:intron | 35.0% | |
GTTCTTAGTGATGTAGTGAT+CGG | + | chr3_4:47375512-47375531 | Msa0503790:intron | 35.0% | |
ATCAGCATGTGAAGAAATGT+AGG | + | chr3_4:47375780-47375799 | Msa0503790:intron | 35.0% | |
TCAGCATGTGAAGAAATGTA+GGG | + | chr3_4:47375781-47375800 | Msa0503790:intron | 35.0% | |
ATCGTGTTTCAACTTTACTC+TGG | + | chr3_4:47375870-47375889 | Msa0503790:intron | 35.0% | |
GAAAAAGGGGCAAAAAATAG+AGG | - | chr3_4:47375914-47375933 | None:intergenic | 35.0% | |
TAGAGGAAACAGAGAAAAAG+GGG | - | chr3_4:47375927-47375946 | None:intergenic | 35.0% | |
ACGGTACACCTCATAAATTA+AGG | + | chr3_4:47376045-47376064 | Msa0503790:intron | 35.0% | |
CCGGTATACCTTAATTTATG+AGG | - | chr3_4:47376056-47376075 | None:intergenic | 35.0% | |
!!! | ATTTACCCTGTTTTTATGCG+TGG | + | chr3_4:47376386-47376405 | Msa0503790:intron | 35.0% |
TCTTTGATTCACAGGTGTAT+GGG | - | chr3_4:47376879-47376898 | None:intergenic | 35.0% | |
TTCTTTGATTCACAGGTGTA+TGG | - | chr3_4:47376880-47376899 | None:intergenic | 35.0% | |
!! | TTATGTTGTTTCGTTGATCG+TGG | - | chr3_4:47377004-47377023 | None:intergenic | 35.0% |
! | GTGACAATGTTTGAGGATTT+TGG | - | chr3_4:47377039-47377058 | None:intergenic | 35.0% |
!!! | GGTTGTTTTTCAAAGGTTGT+TGG | - | chr3_4:47377132-47377151 | None:intergenic | 35.0% |
! | ACAACCTTTGAAAAACAACC+GGG | + | chr3_4:47377132-47377151 | Msa0503790:intron | 35.0% |
!!! | TATTCCCGGTTGTTTTTCAA+AGG | - | chr3_4:47377139-47377158 | None:intergenic | 35.0% |
! | TTCTTTGTGAGGTGTGTTTT+GGG | - | chr3_4:47377202-47377221 | None:intergenic | 35.0% |
! | GTATGATGGTACAAGGTTTT+TGG | - | chr3_4:47377238-47377257 | None:intergenic | 35.0% |
! | GATTTTTGTGGTGGTATTTG+TGG | - | chr3_4:47377295-47377314 | None:intergenic | 35.0% |
!!! | TTTTTGGTTAGGGTTAATGG+TGG | - | chr3_4:47377368-47377387 | None:intergenic | 35.0% |
!!! | TGCTTTTTGGTTAGGGTTAA+TGG | - | chr3_4:47377371-47377390 | None:intergenic | 35.0% |
!!! | GTTGATGTTGCTTTTTGGTT+AGG | - | chr3_4:47377379-47377398 | None:intergenic | 35.0% |
!!! | TACTGATTTTGGGTCTTTTG+TGG | - | chr3_4:47377470-47377489 | None:intergenic | 35.0% |
AGTTCGCTTATGAACTGTTA+TGG | - | chr3_4:47377551-47377570 | None:intergenic | 35.0% | |
AAATACTACATCAGTTGTGG+TGG | - | chr3_4:47377618-47377637 | None:intergenic | 35.0% | |
CCATGCCTAATTTAAACGAT+TGG | - | chr3_4:47378037-47378056 | None:intergenic | 35.0% | |
CCAATCGTTTAAATTAGGCA+TGG | + | chr3_4:47378034-47378053 | Msa0503790:intron | 35.0% | |
GTATAATCAAATCGGGTATG+GGG | - | chr3_4:47378098-47378117 | None:intergenic | 35.0% | |
CGGGTAAGTATAATCAAATC+GGG | - | chr3_4:47378105-47378124 | None:intergenic | 35.0% | |
AATTATTCAATGTGGAGACG+GGG | - | chr3_4:47378207-47378226 | None:intergenic | 35.0% | |
!! | TTTTACATTTGGGATGGGTT+TGG | + | chr3_4:47378414-47378433 | Msa0503790:intron | 35.0% |
! | TTTACATTTGGGATGGGTTT+GGG | + | chr3_4:47378415-47378434 | Msa0503790:intron | 35.0% |
! | TTTTCCCCGATTTCAAAACA+CGG | - | chr3_4:47378487-47378506 | None:intergenic | 35.0% |
TAAAACAGTAAGTGAATGGC+TGG | + | chr3_4:47379042-47379061 | Msa0503790:intron | 35.0% | |
AATGGCGAAAATCTCGTTAA+TGG | + | chr3_4:47379268-47379287 | Msa0503790:intron | 35.0% | |
! | TTGCATTTTCCTGCACAAAA+AGG | + | chr3_4:47379328-47379347 | Msa0503790:intron | 35.0% |
! | TGCATTTTCCTGCACAAAAA+GGG | + | chr3_4:47379329-47379348 | Msa0503790:intron | 35.0% |
CATCATGTAGATCAAATGGA+AGG | - | chr3_4:47379701-47379720 | None:intergenic | 35.0% | |
CTTCCATTTGATCTACATGA+TGG | + | chr3_4:47379699-47379718 | Msa0503790:intron | 35.0% | |
TTCCTTGCTTTCATCATTGT+TGG | - | chr3_4:47380189-47380208 | None:intergenic | 35.0% | |
TGAATTAACTCCCACTTTGT+TGG | - | chr3_4:47380625-47380644 | None:intergenic | 35.0% | |
CTTGAAAAAATGGATGGGAA+AGG | - | chr3_4:47380990-47381009 | None:intergenic | 35.0% | |
GGAGGATGATCTTGAAAAAA+TGG | - | chr3_4:47381000-47381019 | None:intergenic | 35.0% | |
! | GTCTTTGAAGATTAGATTGG+AGG | - | chr3_4:47381018-47381037 | None:intergenic | 35.0% |
GAATACTAATTTGACACCGT+TGG | + | chr3_4:47381192-47381211 | Msa0503790:intron | 35.0% | |
TGTCTCCTTGTAAACTCATT+TGG | - | chr3_4:47381259-47381278 | None:intergenic | 35.0% | |
AATGAGTTTACAAGGAGACA+TGG | + | chr3_4:47381259-47381278 | Msa0503790:CDS | 35.0% | |
ACTTTCCATTTAGTACCATC+AGG | - | chr3_4:47381319-47381338 | None:intergenic | 35.0% | |
!! | TGGTGAGATTTGGTTTGAAA+AGG | + | chr3_4:47374123-47374142 | Msa0503790:CDS | 35.0% |
!! | GGTGAGATTTGGTTTGAAAA+GGG | + | chr3_4:47381358-47381377 | Msa0503790:CDS | 35.0% |
!! | AGATTTGGTTTGAAAAGGGT+TGG | + | chr3_4:47381362-47381381 | Msa0503790:CDS | 35.0% |
GAAAATTACTCTCTTGGACA+TGG | + | chr3_4:47381397-47381416 | Msa0503790:CDS | 35.0% | |
!! | AGTCTATTTCTACTGCATTC+TGG | - | chr3_4:47381480-47381499 | None:intergenic | 35.0% |
! | TATGTATAGTTAGGCTTGGT+CGG | + | chr3_4:47381651-47381670 | Msa0503790:intron | 35.0% |
ATGTCTATGACCAAAGTCTT+TGG | + | chr3_4:47381809-47381828 | Msa0503790:intron | 35.0% | |
ATTAGTCACATTGAACAGCA+TGG | + | chr3_4:47381956-47381975 | Msa0503790:intron | 35.0% | |
TACCCAGTGTGGTAAAAATA+AGG | - | chr3_4:47382087-47382106 | None:intergenic | 35.0% | |
GAAACAAAGCTTCATATGTG+TGG | - | chr3_4:47382428-47382447 | None:intergenic | 35.0% | |
AGGGGACTAAAATCAAATGT+TGG | - | chr3_4:47382612-47382631 | None:intergenic | 35.0% | |
ATACTTCCATGACATTGCTT+GGG | - | chr3_4:47382837-47382856 | None:intergenic | 35.0% | |
AATACTTCCATGACATTGCT+TGG | - | chr3_4:47382838-47382857 | None:intergenic | 35.0% | |
CTTGCTCTACATTGAACATT+GGG | - | chr3_4:47382862-47382881 | None:intergenic | 35.0% | |
ACTTGCTCTACATTGAACAT+TGG | - | chr3_4:47382863-47382882 | None:intergenic | 35.0% | |
TGGTCCCTTAAGTTATTTGT+TGG | + | chr3_4:47382922-47382941 | Msa0503790:intron | 35.0% | |
TGGTCCCTTAAGTTATTTGT+TGG | + | chr3_4:47382922-47382941 | Msa0503790:intron | 35.0% | |
AATAACATAAAGGACCAGAG+TGG | - | chr3_4:47383102-47383121 | None:intergenic | 35.0% | |
!! | TGGTCCCTTAACTTACTTTT+TGG | - | chr3_4:47383179-47383198 | None:intergenic | 35.0% |
TGGTCCCTTAAGTTATTTGT+TGG | - | chr3_4:47382922-47382941 | None:intergenic | 35.0% | |
TACACAAATATATGCAGCTG+TGG | + | chr3_4:47383594-47383613 | Msa0503790:intron | 35.0% | |
! | GATTTTCTGCTAGATGAGTA+GGG | - | chr3_4:47383732-47383751 | None:intergenic | 35.0% |
CTACTCATCTAGCAGAAAAT+CGG | + | chr3_4:47383731-47383750 | Msa0503790:CDS | 35.0% | |
TACTCATCTAGCAGAAAATC+GGG | + | chr3_4:47383732-47383751 | Msa0503790:CDS | 35.0% | |
CAGTGTGTACCAACTTTAAA+TGG | + | chr3_4:47383857-47383876 | Msa0503790:intron | 35.0% | |
GTGTGTACCAACTTTAAATG+GGG | + | chr3_4:47383859-47383878 | Msa0503790:intron | 35.0% | |
!! | ACATTTCTAGCCTCACAATA+AGG | - | chr3_4:47383953-47383972 | None:intergenic | 35.0% |
!! | GATACATTAACGGTCACTTT+TGG | - | chr3_4:47384092-47384111 | None:intergenic | 35.0% |
TGACCGTTAATGTATCTGTT+TGG | + | chr3_4:47384096-47384115 | Msa0503790:exon | 35.0% | |
ACACTTTCCTTTCCATCAAA+TGG | + | chr3_4:47384167-47384186 | Msa0503790:three_prime_UTR | 35.0% | |
CACTTTCCTTTCCATCAAAT+GGG | + | chr3_4:47384168-47384187 | Msa0503790:three_prime_UTR | 35.0% | |
ACTTTACTTCACCCATTTGA+TGG | - | chr3_4:47384182-47384201 | None:intergenic | 35.0% | |
ACAACTAAAACCAAAGCTGA+GGG | - | chr3_4:47384207-47384226 | None:intergenic | 35.0% | |
TACAACTAAAACCAAAGCTG+AGG | - | chr3_4:47384208-47384227 | None:intergenic | 35.0% | |
AAGAAATACATGCCTCATGA+TGG | - | chr3_4:47384259-47384278 | None:intergenic | 35.0% | |
!! | GTCAAATCCAGTGTTGATCA+AGG | + | chr3_4:47374057-47374076 | Msa0503790:CDS | 40.0% |
ACTTTCCATTTAGTGCCATC+AGG | - | chr3_4:47374085-47374104 | None:intergenic | 40.0% | |
!! | GGTGAGATTTGGTTTGAAAG+GGG | + | chr3_4:47374124-47374143 | Msa0503790:CDS | 40.0% |
!! | AGATTTGGTTTGAAAGGGGT+TGG | + | chr3_4:47374128-47374147 | Msa0503790:intron | 40.0% |
CTAGTGGAAGAACTACATCA+TGG | + | chr3_4:47374602-47374621 | Msa0503790:CDS | 40.0% | |
TACATCATGGAATTGGCCAA+AGG | + | chr3_4:47374615-47374634 | Msa0503790:CDS | 40.0% | |
ACATCATGGAATTGGCCAAA+GGG | + | chr3_4:47374616-47374635 | Msa0503790:CDS | 40.0% | |
TGCAGATTGGGAAAAGATCA+TGG | + | chr3_4:47374897-47374916 | Msa0503790:CDS | 40.0% | |
! | CCCTTATTTGCAAGTGAAAG+TGG | + | chr3_4:47374980-47374999 | Msa0503790:CDS | 40.0% |
TCAAAGACACAAACATCTCC+CGG | - | chr3_4:47375013-47375032 | None:intergenic | 40.0% | |
GGTGAAGTAACCTCAAACTT+TGG | + | chr3_4:47375147-47375166 | Msa0503790:intron | 40.0% | |
GCTCTCATGCAATTTGCAAA+TGG | + | chr3_4:47375408-47375427 | Msa0503790:intron | 40.0% | |
!! | TCTAGTCTCCAAGAAGCATT+TGG | + | chr3_4:47375706-47375725 | Msa0503790:intron | 40.0% |
CTCAATAGCCAAATGCTTCT+TGG | - | chr3_4:47375717-47375736 | None:intergenic | 40.0% | |
CAGCATGTGAAGAAATGTAG+GGG | + | chr3_4:47375782-47375801 | Msa0503790:intron | 40.0% | |
AGGAACCACGCATAAAAACA+GGG | - | chr3_4:47376394-47376413 | None:intergenic | 40.0% | |
TAGGAACCACGCATAAAAAC+AGG | - | chr3_4:47376395-47376414 | None:intergenic | 40.0% | |
TATACAGATGAGATGTTCGG+TGG | - | chr3_4:47376684-47376703 | None:intergenic | 40.0% | |
TAGCTTAACACTCATTGTGC+TGG | - | chr3_4:47376802-47376821 | None:intergenic | 40.0% | |
AGCACAATGAGTGTTAAGCT+AGG | + | chr3_4:47376801-47376820 | Msa0503790:intron | 40.0% | |
! | AGGTGTATGGGTTTTCCATT+GGG | - | chr3_4:47376867-47376886 | None:intergenic | 40.0% |
!!! | TCGTGGTGTTAGCTTTGTTT+TGG | - | chr3_4:47376987-47377006 | None:intergenic | 40.0% |
GGAAGTTGTGACAATGTTTG+AGG | - | chr3_4:47377046-47377065 | None:intergenic | 40.0% | |
! | AAGAGCTAATGGTGGTGTTT+GGG | - | chr3_4:47377166-47377185 | None:intergenic | 40.0% |
! | GTTCTTTGTGAGGTGTGTTT+TGG | - | chr3_4:47377203-47377222 | None:intergenic | 40.0% |
!!! | AGGTTTTTGGTTGGCTTTTG+CGG | - | chr3_4:47377225-47377244 | None:intergenic | 40.0% |
!!! | GATGGTACAAGGTTTTTGGT+TGG | - | chr3_4:47377234-47377253 | None:intergenic | 40.0% |
! | CCTTGTTGTATGATGGTACA+AGG | - | chr3_4:47377245-47377264 | None:intergenic | 40.0% |
CCTTGTACCATCATACAACA+AGG | + | chr3_4:47377242-47377261 | Msa0503790:intron | 40.0% | |
! | TTTTGTGGTGGTATTTGTGG+TGG | - | chr3_4:47377292-47377311 | None:intergenic | 40.0% |
!!! | GTCAATGGTAGTTTTGGTGA+CGG | - | chr3_4:47377334-47377353 | None:intergenic | 40.0% |
! | GTTAATGGTGGTTTTTGTGG+TGG | - | chr3_4:47377356-47377375 | None:intergenic | 40.0% |
! | AGGGTTAATGGTGGTTTTTG+TGG | - | chr3_4:47377359-47377378 | None:intergenic | 40.0% |
!!! | TGGTGGTTGATGTTGCTTTT+TGG | - | chr3_4:47377384-47377403 | None:intergenic | 40.0% |
!! | TGATTTTGGGTCTTTTGTGG+CGG | - | chr3_4:47377467-47377486 | None:intergenic | 40.0% |
!!! | TTCATGGCGGTACTGATTTT+GGG | - | chr3_4:47377480-47377499 | None:intergenic | 40.0% |
!!! | TTTCATGGCGGTACTGATTT+TGG | - | chr3_4:47377481-47377500 | None:intergenic | 40.0% |
! | CTTCATGGCAATTTTCATGG+CGG | - | chr3_4:47377493-47377512 | None:intergenic | 40.0% |
! | GTGCTTCATGGCAATTTTCA+TGG | - | chr3_4:47377496-47377515 | None:intergenic | 40.0% |
!! | TCTTTGGTTGTGTTGGTTTG+TGG | - | chr3_4:47377518-47377537 | None:intergenic | 40.0% |
CGATGAATCTTTGGTTGTGT+TGG | - | chr3_4:47377525-47377544 | None:intergenic | 40.0% | |
GTTATGTTTGCTCGCAACAT+AGG | - | chr3_4:47377593-47377612 | None:intergenic | 40.0% | |
AAGATATACGCAACTCTCTG+TGG | - | chr3_4:47377689-47377708 | None:intergenic | 40.0% | |
AGAGATAGGACTATTTCGCT+TGG | + | chr3_4:47377807-47377826 | Msa0503790:intron | 40.0% | |
GAGATAGGACTATTTCGCTT+GGG | + | chr3_4:47377808-47377827 | Msa0503790:intron | 40.0% | |
AGATAGGACTATTTCGCTTG+GGG | + | chr3_4:47377809-47377828 | Msa0503790:intron | 40.0% | |
GCAATCTCTCGATCGATTAA+CGG | + | chr3_4:47377860-47377879 | Msa0503790:intron | 40.0% | |
TTCAATTTCTCATCCCCGTT+GGG | - | chr3_4:47378142-47378161 | None:intergenic | 40.0% | |
ATTCAATTTCTCATCCCCGT+TGG | - | chr3_4:47378143-47378162 | None:intergenic | 40.0% | |
TGTTAAAGTGAGCGTATTGC+TGG | - | chr3_4:47378288-47378307 | None:intergenic | 40.0% | |
CGATTTCAAAACACGGGTAT+GGG | - | chr3_4:47378480-47378499 | None:intergenic | 40.0% | |
!!! | CCATACCCGTGTTTTGAAAT+CGG | + | chr3_4:47378478-47378497 | Msa0503790:intron | 40.0% |
!!! | CATACCCGTGTTTTGAAATC+GGG | + | chr3_4:47378479-47378498 | Msa0503790:intron | 40.0% |
!!! | ATACCCGTGTTTTGAAATCG+GGG | + | chr3_4:47378480-47378499 | Msa0503790:intron | 40.0% |
TTTCCCCGATTTCAAAACAC+GGG | - | chr3_4:47378486-47378505 | None:intergenic | 40.0% | |
!! | TTTTGACTGGGTTTGGGTAT+GGG | - | chr3_4:47378516-47378535 | None:intergenic | 40.0% |
ATACCCAAACCCAGTCAAAA+CGG | + | chr3_4:47378516-47378535 | Msa0503790:intron | 40.0% | |
AAAACCCGTCAAATTGGGTT+TGG | + | chr3_4:47378541-47378560 | Msa0503790:intron | 40.0% | |
!! | CATCTACTCTTGTGGTTTTG+AGG | - | chr3_4:47378848-47378867 | None:intergenic | 40.0% |
TGTAGCTACATCTACTCTTG+TGG | - | chr3_4:47378856-47378875 | None:intergenic | 40.0% | |
AGAGAGAGAAACACAAAGCA+AGG | - | chr3_4:47378980-47378999 | None:intergenic | 40.0% | |
!!! | CTGGTTTTAGAGAGAGACTA+GGG | - | chr3_4:47379010-47379029 | None:intergenic | 40.0% |
!!! | TCTGGTTTTAGAGAGAGACT+AGG | - | chr3_4:47379011-47379030 | None:intergenic | 40.0% |
TTTCGCTATTAGCGAAATGC+TGG | + | chr3_4:47379126-47379145 | Msa0503790:intron | 40.0% | |
TATCTGCTTATGCACCAATG+AGG | + | chr3_4:47379150-47379169 | Msa0503790:intron | 40.0% | |
GCGAACTTCAAGAAGACAAA+TGG | - | chr3_4:47379196-47379215 | None:intergenic | 40.0% | |
CTTTGCCAACATTTCGCTAA+TGG | + | chr3_4:47379250-47379269 | Msa0503790:intron | 40.0% | |
TTTCGCCATTAGCGAAATGT+TGG | - | chr3_4:47379258-47379277 | None:intergenic | 40.0% | |
TGGCGAAAATCTTGTGAACT+TGG | + | chr3_4:47379288-47379307 | Msa0503790:intron | 40.0% | |
! | TTACTCAACCCTTTTTGTGC+AGG | - | chr3_4:47379340-47379359 | None:intergenic | 40.0% |
TGCACAAAAAGGGTTGAGTA+AGG | + | chr3_4:47379339-47379358 | Msa0503790:intron | 40.0% | |
TTCTCTGTTGTCGTAAAGGT+TGG | - | chr3_4:47379622-47379641 | None:intergenic | 40.0% | |
GTTGTTCTCTGTTGTCGTAA+AGG | - | chr3_4:47379626-47379645 | None:intergenic | 40.0% | |
CATGTAGATCAAATGGAAGG+TGG | - | chr3_4:47379698-47379717 | None:intergenic | 40.0% | |
CCATTTGATCTACATGATGG+CGG | + | chr3_4:47379702-47379721 | Msa0503790:intron | 40.0% | |
GAGTGTAAGGATGACATGTT+GGG | - | chr3_4:47380267-47380286 | None:intergenic | 40.0% | |
TGAGTGTAAGGATGACATGT+TGG | - | chr3_4:47380266-47380285 | None:intergenic | 40.0% | |
GAAGAGTGGGAAAAGATAGA+TGG | - | chr3_4:47380135-47380154 | None:intergenic | 40.0% | |
AAGGAAATCATGGGAAGAGT+GGG | - | chr3_4:47380148-47380167 | None:intergenic | 40.0% | |
AAAGGAAATCATGGGAAGAG+TGG | - | chr3_4:47380149-47380168 | None:intergenic | 40.0% | |
CTCTTCCCATGATTTCCTTT+CGG | + | chr3_4:47380149-47380168 | Msa0503790:intron | 40.0% | |
CTCCAACAATGATGAAAGCA+AGG | + | chr3_4:47380184-47380203 | Msa0503790:intron | 40.0% | |
TGAGTGTAAGGATGACATGT+TGG | + | chr3_4:47380266-47380285 | Msa0503790:intron | 40.0% | |
GAGTGTAAGGATGACATGTT+GGG | + | chr3_4:47380267-47380286 | Msa0503790:intron | 40.0% | |
TTCTAACAGCTCAATTGGGA+AGG | + | chr3_4:47380815-47380834 | Msa0503790:intron | 40.0% | |
AGAGTCCTGATGGTACTAAA+TGG | + | chr3_4:47381311-47381330 | Msa0503790:CDS | 40.0% | |
TGTGGTCGAGGAGAAAATAA+TGG | - | chr3_4:47381616-47381635 | None:intergenic | 40.0% | |
CTTACTTTCTTATGTGGTCG+AGG | - | chr3_4:47381628-47381647 | None:intergenic | 40.0% | |
CGACCACATAAGAAAGTAAG+AGG | + | chr3_4:47381628-47381647 | Msa0503790:intron | 40.0% | |
GAGGTATGTATAGTTAGGCT+TGG | + | chr3_4:47381647-47381666 | Msa0503790:intron | 40.0% | |
AATCAGGCTAAGGTCATCTT+TGG | - | chr3_4:47381939-47381958 | None:intergenic | 40.0% | |
CAATGTGACTAATCAGGCTA+AGG | - | chr3_4:47381949-47381968 | None:intergenic | 40.0% | |
GCTGTTCAATGTGACTAATC+AGG | - | chr3_4:47381955-47381974 | None:intergenic | 40.0% | |
TTGGAAAGAAAGGAACGTGT+TGG | - | chr3_4:47382021-47382040 | None:intergenic | 40.0% | |
AACTTATCATCTACCCAGTG+TGG | - | chr3_4:47382098-47382117 | None:intergenic | 40.0% | |
AGTTGAGCAGCTTCCAATTA+TGG | + | chr3_4:47382114-47382133 | Msa0503790:intron | 40.0% | |
TTCCTCATTTGTGAGAAGCT+TGG | + | chr3_4:47382203-47382222 | Msa0503790:intron | 40.0% | |
ACATGTTATTGGCATCCTAC+TGG | + | chr3_4:47382256-47382275 | Msa0503790:intron | 40.0% | |
ACCCTTGCTCTAGTGTAATA+CGG | + | chr3_4:47382682-47382701 | Msa0503790:intron | 40.0% | |
! | TCATGATGCTTGACGTTTTC+AGG | - | chr3_4:47383543-47383562 | None:intergenic | 40.0% |
TACATCATGGAATTGGCCAA+AGG | + | chr3_4:47374615-47374634 | Msa0503790:CDS | 40.0% | |
ACATCATGGAATTGGCCAAA+GGG | + | chr3_4:47374616-47374635 | Msa0503790:CDS | 40.0% | |
! | CGATTTTCTGCTAGATGAGT+AGG | - | chr3_4:47383733-47383752 | None:intergenic | 40.0% |
AAGTATGTGATGCTGCAGAT+TGG | + | chr3_4:47383899-47383918 | Msa0503790:CDS | 40.0% | |
AGTATGTGATGCTGCAGATT+GGG | + | chr3_4:47383900-47383919 | Msa0503790:CDS | 40.0% | |
TGCAGATTGGGAAAAGATCA+TGG | + | chr3_4:47374897-47374916 | Msa0503790:CDS | 40.0% | |
GAAACTGCTTCCTTATTGTG+AGG | + | chr3_4:47383940-47383959 | Msa0503790:CDS | 40.0% | |
ACCACTTTCTCTTGCAAACA+GGG | - | chr3_4:47383999-47384018 | None:intergenic | 40.0% | |
ACTTCACCCATTTGATGGAA+AGG | - | chr3_4:47384177-47384196 | None:intergenic | 40.0% | |
AGTAAAGTAACCCTCAGCTT+TGG | + | chr3_4:47384194-47384213 | Msa0503790:three_prime_UTR | 40.0% | |
TTGAACTGTAGTCCATCATG+AGG | + | chr3_4:47384244-47384263 | Msa0503790:three_prime_UTR | 40.0% | |
! | AAAATTGCTGCCTTGTTGCG+AGG | + | chr3_4:47374925-47374944 | Msa0503790:CDS | 45.0% |
!!! | CCATTTTTAGCCTCGCAACA+AGG | - | chr3_4:47374938-47374957 | None:intergenic | 45.0% |
CCTTGTTGCGAGGCTAAAAA+TGG | + | chr3_4:47374935-47374954 | Msa0503790:CDS | 45.0% | |
TAAAAATGGTCGCCGCCTTT+CGG | + | chr3_4:47374949-47374968 | Msa0503790:CDS | 45.0% | |
!! | AAGTGAAAGTGGACTGCAAC+CGG | + | chr3_4:47374991-47375010 | Msa0503790:CDS | 45.0% |
! | TGGTTAGTTGGGGTAGTTAG+CGG | + | chr3_4:47375490-47375509 | Msa0503790:intron | 45.0% |
GAAGGGTCCTCTCAAAGTAT+AGG | - | chr3_4:47375629-47375648 | None:intergenic | 45.0% | |
AAGTTCGAATCCCAGTCTGT+GGG | + | chr3_4:47375816-47375835 | Msa0503790:intron | 45.0% | |
ATCATGCAATCCCACAGACT+GGG | - | chr3_4:47375829-47375848 | None:intergenic | 45.0% | |
! | CAGGTGTATGGGTTTTCCAT+TGG | - | chr3_4:47376868-47376887 | None:intergenic | 45.0% |
!! | TGTTAGGAGGCGTTTCCTAT+AGG | - | chr3_4:47376918-47376937 | None:intergenic | 45.0% |
TAGGAAACGCCTCCTAACAA+AGG | + | chr3_4:47376919-47376938 | Msa0503790:intron | 45.0% | |
AGGAAACGCCTCCTAACAAA+GGG | + | chr3_4:47376920-47376939 | Msa0503790:intron | 45.0% | |
TTCGGAGATAGCCCTTTGTT+AGG | - | chr3_4:47376934-47376953 | None:intergenic | 45.0% | |
!!! | GGTGTTTGGGGTTTTATTCC+CGG | - | chr3_4:47377153-47377172 | None:intergenic | 45.0% |
! | AGAGCTAATGGTGGTGTTTG+GGG | - | chr3_4:47377165-47377184 | None:intergenic | 45.0% |
! | GAAGAGCTAATGGTGGTGTT+TGG | - | chr3_4:47377167-47377186 | None:intergenic | 45.0% |
! | AAGGTGCTTGGAAGAGCTAA+TGG | - | chr3_4:47377177-47377196 | None:intergenic | 45.0% |
!! | TTTGTGGTGGTGGTTAGTGA+TGG | - | chr3_4:47377279-47377298 | None:intergenic | 45.0% |
!!! | AGTGGTGCTGATTTTTGTGG+TGG | - | chr3_4:47377304-47377323 | None:intergenic | 45.0% |
!!! | GGTAGTGGTGCTGATTTTTG+TGG | - | chr3_4:47377307-47377326 | None:intergenic | 45.0% |
!!! | AATGGTAGTTTTGGTGACGG+TGG | - | chr3_4:47377331-47377350 | None:intergenic | 45.0% |
! | GTGGTGGTCAATGGTAGTTT+TGG | - | chr3_4:47377340-47377359 | None:intergenic | 45.0% |
! | GTGGTTTTTGTGGTGGTCAA+TGG | - | chr3_4:47377349-47377368 | None:intergenic | 45.0% |
!! | GATTTTGGGTCTTTTGTGGC+GGG | - | chr3_4:47377466-47377485 | None:intergenic | 45.0% |
!! | TGTTGGTTTGTGGTGCTTCA+TGG | - | chr3_4:47377508-47377527 | None:intergenic | 45.0% |
ATGTTTGCTCGCAACATAGG+TGG | - | chr3_4:47377590-47377609 | None:intergenic | 45.0% | |
TACTACATCAGTTGTGGTGG+AGG | - | chr3_4:47377615-47377634 | None:intergenic | 45.0% | |
AATTAGGCATGGCAATTGGG+CGG | + | chr3_4:47378045-47378064 | Msa0503790:intron | 45.0% | |
AATCAAATCGGGTATGGGGA+CGG | - | chr3_4:47378094-47378113 | None:intergenic | 45.0% | |
TTGGGTATGTGTAGGGTAAC+GGG | - | chr3_4:47378124-47378143 | None:intergenic | 45.0% | |
GTTGGGTATGTGTAGGGTAA+CGG | - | chr3_4:47378125-47378144 | None:intergenic | 45.0% | |
GTTACCCTACACATACCCAA+CGG | + | chr3_4:47378124-47378143 | Msa0503790:intron | 45.0% | |
TTACCCTACACATACCCAAC+GGG | + | chr3_4:47378125-47378144 | Msa0503790:intron | 45.0% | |
! | TTTGGGATGGGTTTGGGTAT+TGG | + | chr3_4:47378421-47378440 | Msa0503790:intron | 45.0% |
!! | GATGGGTTTGGGTATTGGTT+CGG | + | chr3_4:47378426-47378445 | Msa0503790:intron | 45.0% |
!! | ATGGGTTTGGGTATTGGTTC+GGG | + | chr3_4:47378427-47378446 | Msa0503790:intron | 45.0% |
TTCAAAACACGGGTATGGGA+CGG | - | chr3_4:47378476-47378495 | None:intergenic | 45.0% | |
CCGATTTCAAAACACGGGTA+TGG | - | chr3_4:47378481-47378500 | None:intergenic | 45.0% | |
!!! | GTTTTGACTGGGTTTGGGTA+TGG | - | chr3_4:47378517-47378536 | None:intergenic | 45.0% |
TACCCAAACCCAGTCAAAAC+GGG | + | chr3_4:47378517-47378536 | Msa0503790:intron | 45.0% | |
CGAACCAAACCCAATTTGAC+GGG | - | chr3_4:47378548-47378567 | None:intergenic | 45.0% | |
CCGAACCAAACCCAATTTGA+CGG | - | chr3_4:47378549-47378568 | None:intergenic | 45.0% | |
! | CCGTCAAATTGGGTTTGGTT+CGG | + | chr3_4:47378546-47378565 | Msa0503790:intron | 45.0% |
! | CGTCAAATTGGGTTTGGTTC+GGG | + | chr3_4:47378547-47378566 | Msa0503790:intron | 45.0% |
TTCGCTGATGACTTCGCTAA+TGG | + | chr3_4:47379211-47379230 | Msa0503790:intron | 45.0% | |
ATGTTGGCAAAGTTCCAGAG+AGG | - | chr3_4:47379242-47379261 | None:intergenic | 45.0% | |
TGTGCAGGAAAATGCAAGCA+AGG | - | chr3_4:47379325-47379344 | None:intergenic | 45.0% | |
!!! | TCCGGTGGTTGTTTGGTTTT+CGG | - | chr3_4:47379524-47379543 | None:intergenic | 45.0% |
AATGCTTTCCGGTGGTTGTT+TGG | - | chr3_4:47379531-47379550 | None:intergenic | 45.0% | |
! | GTGTGTCGTTGAATGCTTTC+CGG | - | chr3_4:47379542-47379561 | None:intergenic | 45.0% |
CGTTTGGTTGGGACATTGAT+GGG | - | chr3_4:47379572-47379591 | None:intergenic | 45.0% | |
TCGTTTGGTTGGGACATTGA+TGG | - | chr3_4:47379573-47379592 | None:intergenic | 45.0% | |
CCGCCATCATGTAGATCAAA+TGG | - | chr3_4:47379705-47379724 | None:intergenic | 45.0% | |
! | CGTACGTATGCTGTGTCTTT+TGG | - | chr3_4:47380581-47380600 | None:intergenic | 45.0% |
!! | ATGGATGATGGAGTGTGAAG+TGG | - | chr3_4:47380950-47380969 | None:intergenic | 45.0% |
ACTTCACACTCCATCATCCA+TGG | + | chr3_4:47380949-47380968 | Msa0503790:intron | 45.0% | |
TTTCTCCTAGCCATGGATGA+TGG | - | chr3_4:47380962-47380981 | None:intergenic | 45.0% | |
!! | CAAGTTGGTCAGTAAGCCAA+CGG | - | chr3_4:47381211-47381230 | None:intergenic | 45.0% |
! | GTTGGCTTACTGACCAACTT+GGG | + | chr3_4:47381210-47381229 | Msa0503790:intron | 45.0% |
TCAGGACTCTTGATCAACAC+TGG | - | chr3_4:47381301-47381320 | None:intergenic | 45.0% | |
! | GTGTTGATCAAGAGTCCTGA+TGG | + | chr3_4:47381301-47381320 | Msa0503790:CDS | 45.0% |
GGTCGAGGAGAAAATAATGG+CGG | - | chr3_4:47381613-47381632 | None:intergenic | 45.0% | |
TTAGTTAGCGTTGTGGGAGT+TGG | + | chr3_4:47381907-47381926 | Msa0503790:intron | 45.0% | |
AGCCAAGCTTCTCACAAATG+AGG | - | chr3_4:47382208-47382227 | None:intergenic | 45.0% | |
CATTTGTGAGAAGCTTGGCT+TGG | + | chr3_4:47382208-47382227 | Msa0503790:intron | 45.0% | |
CCCGTATTACACTAGAGCAA+GGG | - | chr3_4:47382686-47382705 | None:intergenic | 45.0% | |
CCCTTGCTCTAGTGTAATAC+GGG | + | chr3_4:47382683-47382702 | Msa0503790:intron | 45.0% | |
ACCCGTATTACACTAGAGCA+AGG | - | chr3_4:47382687-47382706 | None:intergenic | 45.0% | |
GTGTAATACGGGTTCCACTT+TGG | + | chr3_4:47382694-47382713 | Msa0503790:intron | 45.0% | |
ACACAACTATGGCACCAAAG+TGG | - | chr3_4:47382711-47382730 | None:intergenic | 45.0% | |
! | TGATGTGTGTTGATGGGTGT+GGG | - | chr3_4:47382781-47382800 | None:intergenic | 45.0% |
! | TTGATGTGTGTTGATGGGTG+TGG | - | chr3_4:47382782-47382801 | None:intergenic | 45.0% |
! | GGCTGTTGATGTGTGTTGAT+GGG | - | chr3_4:47382787-47382806 | None:intergenic | 45.0% |
TGGCTGTTGATGTGTGTTGA+TGG | - | chr3_4:47382788-47382807 | None:intergenic | 45.0% | |
ATCAACACACATCAACAGCC+AGG | + | chr3_4:47382787-47382806 | Msa0503790:intron | 45.0% | |
AACAGCCAGGATTGCTTCAA+TGG | + | chr3_4:47382800-47382819 | Msa0503790:intron | 45.0% | |
GATTGCTTCAATGGCACCAA+TGG | + | chr3_4:47382809-47382828 | Msa0503790:intron | 45.0% | |
! | GGTTGACGGATGAAGAGTTA+AGG | - | chr3_4:47383081-47383100 | None:intergenic | 45.0% |
TAAAGGACCAGAGTGGTTGA+CGG | - | chr3_4:47383095-47383114 | None:intergenic | 45.0% | |
TCATCTAGCAGAAAATCGGG+TGG | + | chr3_4:47383735-47383754 | Msa0503790:CDS | 45.0% | |
TCCCTGTTTGCAAGAGAAAG+TGG | + | chr3_4:47383995-47384014 | Msa0503790:CDS | 45.0% | |
GACCACTTTCTCTTGCAAAC+AGG | - | chr3_4:47384000-47384019 | None:intergenic | 45.0% | |
AGAGAAAGTGGTCTGCAAGT+AGG | + | chr3_4:47384007-47384026 | Msa0503790:CDS | 45.0% | |
!!! | TAATTTTATAGATAAAATTT+TGG | + | chr3_4:47382885-47382904 | Msa0503790:intron | 5.0% |
CTTGAAGAAACGGATGGGGA+GGG | - | chr3_4:47373640-47373659 | None:intergenic | 50.0% | |
TCTTGAAGAAACGGATGGGG+AGG | - | chr3_4:47373641-47373660 | None:intergenic | 50.0% | |
TCAGGAGCCTTGATCAACAC+TGG | - | chr3_4:47374067-47374086 | None:intergenic | 50.0% | |
! | GTGTTGATCAAGGCTCCTGA+TGG | + | chr3_4:47374067-47374086 | Msa0503790:CDS | 50.0% |
AGGCTCCTGATGGCACTAAA+TGG | + | chr3_4:47374077-47374096 | Msa0503790:CDS | 50.0% | |
!! | CTCTCTAGGACATGGGTGTT+TGG | + | chr3_4:47374171-47374190 | Msa0503790:intron | 50.0% |
ACTTGCAAATAAGGGCCACC+CGG | - | chr3_4:47374975-47374994 | None:intergenic | 50.0% | |
!! | AGTGAAAGTGGACTGCAACC+GGG | + | chr3_4:47374992-47375011 | Msa0503790:CDS | 50.0% |
CACAGACTGGGATTCGAACT+TGG | - | chr3_4:47375817-47375836 | None:intergenic | 50.0% | |
CAAGTTCGAATCCCAGTCTG+TGG | + | chr3_4:47375815-47375834 | Msa0503790:intron | 50.0% | |
GATCATGCAATCCCACAGAC+TGG | - | chr3_4:47375830-47375849 | None:intergenic | 50.0% | |
GGAGATAGCCCTTTGTTAGG+AGG | - | chr3_4:47376931-47376950 | None:intergenic | 50.0% | |
!! | GAGTGTGAGCATCGGAATGT+GGG | - | chr3_4:47377073-47377092 | None:intergenic | 50.0% |
!! | TGAGTGTGAGCATCGGAATG+TGG | - | chr3_4:47377074-47377093 | None:intergenic | 50.0% |
GTGCTTGGAAGAGCTAATGG+TGG | - | chr3_4:47377174-47377193 | None:intergenic | 50.0% | |
!!! | GTGTTTTGGGTGAAGGTGCT+TGG | - | chr3_4:47377189-47377208 | None:intergenic | 50.0% |
!! | GTGAGGTGTGTTTTGGGTGA+AGG | - | chr3_4:47377196-47377215 | None:intergenic | 50.0% |
! | GGCTTTTGCGGTTCTTTGTG+AGG | - | chr3_4:47377213-47377232 | None:intergenic | 50.0% |
TGTGGTGGTATTTGTGGTGG+TGG | - | chr3_4:47377289-47377308 | None:intergenic | 50.0% | |
!! | GTGCTAGTGGTGGTTTTTGG+TGG | - | chr3_4:47377420-47377439 | None:intergenic | 50.0% |
!! | GTGGTGCTAGTGGTGGTTTT+TGG | - | chr3_4:47377423-47377442 | None:intergenic | 50.0% |
!!! | GTTTTTGGTGGTGGTGCTAG+TGG | - | chr3_4:47377433-47377452 | None:intergenic | 50.0% |
!!! | CTCGTTGTGGTTTTTGGTGG+TGG | - | chr3_4:47377442-47377461 | None:intergenic | 50.0% |
!! | GGACTCGTTGTGGTTTTTGG+TGG | - | chr3_4:47377445-47377464 | None:intergenic | 50.0% |
GAGATTGCAGCTGTTACGCT+TGG | - | chr3_4:47377848-47377867 | None:intergenic | 50.0% | |
ATTAGGCATGGCAATTGGGC+GGG | + | chr3_4:47378046-47378065 | Msa0503790:intron | 50.0% | |
ATCAAATCGGGTATGGGGAC+GGG | - | chr3_4:47378093-47378112 | None:intergenic | 50.0% | |
TACCCTACACATACCCAACG+GGG | + | chr3_4:47378126-47378145 | Msa0503790:intron | 50.0% | |
ATCCCCGTTGGGTATGTGTA+GGG | - | chr3_4:47378131-47378150 | None:intergenic | 50.0% | |
!! | TGGGTTTGGGTATTGGTTCG+GGG | + | chr3_4:47378428-47378447 | Msa0503790:intron | 50.0% |
!! | TTTGGGTATTGGTTCGGGGT+GGG | + | chr3_4:47378432-47378451 | Msa0503790:intron | 50.0% |
TCAAAACACGGGTATGGGAC+GGG | - | chr3_4:47378475-47378494 | None:intergenic | 50.0% | |
CTGGGTTTGGGTATGGGTAT+GGG | - | chr3_4:47378510-47378529 | None:intergenic | 50.0% | |
ACTGGGTTTGGGTATGGGTA+TGG | - | chr3_4:47378511-47378530 | None:intergenic | 50.0% | |
ACCCAAACCCAGTCAAAACG+GGG | + | chr3_4:47378518-47378537 | Msa0503790:intron | 50.0% | |
!!! | TCCCCGTTTTGACTGGGTTT+GGG | - | chr3_4:47378522-47378541 | None:intergenic | 50.0% |
!!! | TTCCCCGTTTTGACTGGGTT+TGG | - | chr3_4:47378523-47378542 | None:intergenic | 50.0% |
!!! | GGGTTTTCCCCGTTTTGACT+GGG | - | chr3_4:47378528-47378547 | None:intergenic | 50.0% |
ACGGGGAAAACCCGTCAAAT+TGG | + | chr3_4:47378535-47378554 | Msa0503790:intron | 50.0% | |
CGGGGAAAACCCGTCAAATT+GGG | + | chr3_4:47378536-47378555 | Msa0503790:intron | 50.0% | |
!! | CAAATTGGGTTTGGTTCGGG+CGG | + | chr3_4:47378550-47378569 | Msa0503790:intron | 50.0% |
!! | AAATTGGGTTTGGTTCGGGC+GGG | + | chr3_4:47378551-47378570 | Msa0503790:intron | 50.0% |
CTGCTTATGCACCAATGAGG+TGG | + | chr3_4:47379153-47379172 | Msa0503790:intron | 50.0% | |
ACAAATGGATAAGGGCGACG+TGG | - | chr3_4:47379181-47379200 | None:intergenic | 50.0% | |
!!! | CCGGTGGTTGTTTGGTTTTC+GGG | - | chr3_4:47379523-47379542 | None:intergenic | 50.0% |
CCCGAAAACCAAACAACCAC+CGG | + | chr3_4:47379520-47379539 | Msa0503790:intron | 50.0% | |
TGTCGTTGAATGCTTTCCGG+TGG | - | chr3_4:47379539-47379558 | None:intergenic | 50.0% | |
!! | TGGGACATTGATGGGTTTCG+TGG | - | chr3_4:47379564-47379583 | None:intergenic | 50.0% |
AACAGAGAACAACCGCACGT+CGG | + | chr3_4:47379633-47379652 | Msa0503790:intron | 50.0% | |
ACACTCCATCATCCATGGCT+AGG | + | chr3_4:47380954-47380973 | Msa0503790:intron | 50.0% | |
GGTAGCATTTCTCCTAGCCA+TGG | - | chr3_4:47373619-47373638 | None:intergenic | 50.0% | |
!! | CGTTGGCTTACTGACCAACT+TGG | + | chr3_4:47381209-47381228 | Msa0503790:intron | 50.0% |
CTCTCTTGGACATGGCTGTT+TGG | + | chr3_4:47381405-47381424 | Msa0503790:CDS | 50.0% | |
TCTTGGACATGGCTGTTTGG+TGG | + | chr3_4:47381408-47381427 | Msa0503790:CDS | 50.0% | |
AATGGCAGCTATGCACCAGT+AGG | - | chr3_4:47382274-47382293 | None:intergenic | 50.0% | |
GTGCCATAGTTGTGTGCCAT+TGG | + | chr3_4:47382716-47382735 | Msa0503790:intron | 50.0% | |
GCACCAATGGCACACAACTA+TGG | - | chr3_4:47382722-47382741 | None:intergenic | 50.0% | |
TGTGATGTGTGTGTGTGTGG+TGG | - | chr3_4:47382750-47382769 | None:intergenic | 50.0% | |
GTGTGTGATGTGTGTGTGTG+TGG | - | chr3_4:47382753-47382772 | None:intergenic | 50.0% | |
! | GATGTGTGTTGATGGGTGTG+GGG | - | chr3_4:47382780-47382799 | None:intergenic | 50.0% |
!! | TGGTGCCATTGAAGCAATCC+TGG | - | chr3_4:47382808-47382827 | None:intergenic | 50.0% |
! | TGACATTGCTTGGGTGCCAT+TGG | - | chr3_4:47382828-47382847 | None:intergenic | 50.0% |
ATGGCACCCAAGCAATGTCA+TGG | + | chr3_4:47382828-47382847 | Msa0503790:intron | 50.0% | |
TCTTCATCCGTCAACCACTC+TGG | + | chr3_4:47383085-47383104 | Msa0503790:intron | 50.0% | |
TAGAAATGTTCGCCGCCTCT+CGG | + | chr3_4:47383964-47383983 | Msa0503790:CDS | 50.0% | |
TCTTGCAAACAGGGACCAAC+CGG | - | chr3_4:47383990-47384009 | None:intergenic | 50.0% | |
! | TCCTGAGCTCTAGCTCCCTT+TGG | - | chr3_4:47374634-47374653 | None:intergenic | 55.0% |
GATAGATGGGGAGCTCCCAA+TGG | + | chr3_4:47376849-47376868 | Msa0503790:intron | 55.0% | |
!! | TGTGAGCATCGGAATGTGGG+TGG | - | chr3_4:47377070-47377089 | None:intergenic | 55.0% |
CAGGGGTTGAGTGTGAGCAT+CGG | - | chr3_4:47377081-47377100 | None:intergenic | 55.0% | |
!! | TTTGGTGACGGTGGTGGTAG+TGG | - | chr3_4:47377322-47377341 | None:intergenic | 55.0% |
!!! | GGTAGTTTTGGTGACGGTGG+TGG | - | chr3_4:47377328-47377347 | None:intergenic | 55.0% |
!! | TTTGGTGGTGGTGCTAGTGG+TGG | - | chr3_4:47377430-47377449 | None:intergenic | 55.0% |
! | GCGGGACTCGTTGTGGTTTT+TGG | - | chr3_4:47377448-47377467 | None:intergenic | 55.0% |
!! | TTTTGTGGCGGGACTCGTTG+TGG | - | chr3_4:47377455-47377474 | None:intergenic | 55.0% |
GCTCGCAACATAGGTGGTGA+TGG | - | chr3_4:47377584-47377603 | None:intergenic | 55.0% | |
TTAGGCATGGCAATTGGGCG+GGG | + | chr3_4:47378047-47378066 | Msa0503790:intron | 55.0% | |
TCAAATCGGGTATGGGGACG+GGG | - | chr3_4:47378092-47378111 | None:intergenic | 55.0% | |
CATCCCCGTTGGGTATGTGT+AGG | - | chr3_4:47378132-47378151 | None:intergenic | 55.0% | |
TCAATGTGGAGACGGGGATG+AGG | - | chr3_4:47378201-47378220 | None:intergenic | 55.0% | |
!! | GTTTGGGTATTGGTTCGGGG+TGG | + | chr3_4:47378431-47378450 | Msa0503790:intron | 55.0% |
!! | GGGACGGGTAACGGGTATAT+AGG | - | chr3_4:47378460-47378479 | None:intergenic | 55.0% |
!! | CGGGTTTTCCCCGTTTTGAC+TGG | - | chr3_4:47378529-47378548 | None:intergenic | 55.0% |
CGCTAATGGCGAAACCTCTC+TGG | + | chr3_4:47379225-47379244 | Msa0503790:intron | 55.0% | |
AGAACAACCGCACGTCGGAA+AGG | + | chr3_4:47379638-47379657 | Msa0503790:intron | 55.0% | |
AACCGCACGTCGGAAAGGTA+CGG | + | chr3_4:47379643-47379662 | Msa0503790:intron | 55.0% | |
AATGGAAGGTGGTGCGACGA+GGG | - | chr3_4:47379687-47379706 | None:intergenic | 55.0% | |
AAATGGAAGGTGGTGCGACG+AGG | - | chr3_4:47379688-47379707 | None:intergenic | 55.0% | |
!! | GATCTACATGATGGCGGCGA+CGG | + | chr3_4:47379708-47379727 | Msa0503790:intron | 55.0% |
! | TGTGGTGGAGATGGCACCAA+TGG | - | chr3_4:47382735-47382754 | None:intergenic | 55.0% |
! | GTGTGTGTGTGTGGTGGAGA+TGG | - | chr3_4:47382744-47382763 | None:intergenic | 55.0% |
! | TCCTGAGCTCTAGCTCCCTT+TGG | - | chr3_4:47374634-47374653 | None:intergenic | 55.0% |
GCCAAAGGGAGCTAGAGCTC+AGG | + | chr3_4:47374630-47374649 | Msa0503790:CDS | 60.0% | |
!! | GAGCATCGGAATGTGGGTGG+TGG | - | chr3_4:47377067-47377086 | None:intergenic | 60.0% |
!! | TTGGTGGTGTTGCGCGTGCA+TGG | - | chr3_4:47377404-47377423 | None:intergenic | 60.0% |
ATGTGGAGACGGGGATGAGG+CGG | - | chr3_4:47378198-47378217 | None:intergenic | 60.0% | |
ACGGGTATGGGACGGGTAAC+GGG | - | chr3_4:47378468-47378487 | None:intergenic | 60.0% | |
CACGGGTATGGGACGGGTAA+CGG | - | chr3_4:47378469-47378488 | None:intergenic | 60.0% | |
!! | TTGGTTCGGGCGGGTAACTG+CGG | + | chr3_4:47378560-47378579 | Msa0503790:intron | 60.0% |
CACCGTACCTTTCCGACGTG+CGG | - | chr3_4:47379648-47379667 | None:intergenic | 60.0% | |
! | GTCGGAAAGGTACGGTGGTG+CGG | + | chr3_4:47379651-47379670 | Msa0503790:intron | 60.0% |
GCCAAAGGGAGCTAGAGCTC+AGG | + | chr3_4:47374630-47374649 | Msa0503790:CDS | 60.0% | |
AATGGTCGCCGCCTTTCGGC+CGG | + | chr3_4:47374953-47374972 | Msa0503790:CDS | 65.0% | |
ATAAGGGCCACCCGGCCGAA+AGG | - | chr3_4:47374967-47374986 | None:intergenic | 65.0% | |
!! | GTGGTGTTGCGCGTGCATGG+TGG | - | chr3_4:47377401-47377420 | None:intergenic | 65.0% |
GCATGGCAATTGGGCGGGGT+GGG | + | chr3_4:47378051-47378070 | Msa0503790:intron | 65.0% | |
CATGGCAATTGGGCGGGGTG+GGG | + | chr3_4:47378052-47378071 | Msa0503790:intron | 65.0% | |
ATCGGGTATGGGGACGGGGA+AGG | - | chr3_4:47378088-47378107 | None:intergenic | 65.0% | |
AATCCCATCCCCGTCCCCGA+CGG | + | chr3_4:47378160-47378179 | Msa0503790:intron | 65.0% | |
ATACCCGAACCCGTCGGGGA+CGG | - | chr3_4:47378173-47378192 | None:intergenic | 65.0% | |
TGTGGAGACGGGGATGAGGC+GGG | - | chr3_4:47378197-47378216 | None:intergenic | 65.0% | |
! | TGGTTCGGGCGGGTAACTGC+GGG | + | chr3_4:47378561-47378580 | Msa0503790:intron | 65.0% |
GGGCGGGTAACTGCGGGTAT+GGG | + | chr3_4:47378567-47378586 | Msa0503790:intron | 65.0% | |
GCGACGTGGAGCCACCTCAT+TGG | - | chr3_4:47379167-47379186 | None:intergenic | 65.0% | |
! | CGCACGTCGGAAAGGTACGG+TGG | + | chr3_4:47379646-47379665 | Msa0503790:intron | 65.0% |
! | GGAAAGGTACGGTGGTGCGG+AGG | + | chr3_4:47379654-47379673 | Msa0503790:intron | 65.0% |
AATGTTCGCCGCCTCTCGGC+CGG | + | chr3_4:47383968-47383987 | Msa0503790:CDS | 65.0% | |
ATGGTCGCCGCCTTTCGGCC+GGG | + | chr3_4:47374954-47374973 | Msa0503790:CDS | 70.0% | |
GGCATGGCAATTGGGCGGGG+TGG | + | chr3_4:47378050-47378069 | Msa0503790:intron | 70.0% | |
ATCCCATCCCCGTCCCCGAC+GGG | + | chr3_4:47378161-47378180 | Msa0503790:intron | 70.0% | |
AACCCGTCGGGGACGGGGAT+GGG | - | chr3_4:47378166-47378185 | None:intergenic | 70.0% | |
! | ATCCCCGTCCCCGACGGGTT+CGG | + | chr3_4:47378166-47378185 | Msa0503790:intron | 70.0% |
TACCCGAACCCGTCGGGGAC+GGG | - | chr3_4:47378172-47378191 | None:intergenic | 70.0% | |
GGGGATACCCGAACCCGTCG+GGG | - | chr3_4:47378177-47378196 | None:intergenic | 70.0% | |
CGGGGATACCCGAACCCGTC+GGG | - | chr3_4:47378178-47378197 | None:intergenic | 70.0% | |
GCGGGGATACCCGAACCCGT+CGG | - | chr3_4:47378179-47378198 | None:intergenic | 70.0% | |
GTGGAGACGGGGATGAGGCG+GGG | - | chr3_4:47378196-47378215 | None:intergenic | 70.0% | |
CGGGCGGGTAACTGCGGGTA+TGG | + | chr3_4:47378566-47378585 | Msa0503790:intron | 70.0% | |
ACAGGGACCAACCGGCCGAG+AGG | - | chr3_4:47383982-47384001 | None:intergenic | 70.0% | |
AGGGCCACCCGGCCGAAAGG+CGG | - | chr3_4:47374964-47374983 | None:intergenic | 75.0% | |
GAACCCGTCGGGGACGGGGA+TGG | - | chr3_4:47378167-47378186 | None:intergenic | 75.0% | |
! | TCCCCGTCCCCGACGGGTTC+GGG | + | chr3_4:47378167-47378186 | Msa0503790:intron | 75.0% |
ACCCGAACCCGTCGGGGACG+GGG | - | chr3_4:47378171-47378190 | None:intergenic | 75.0% | |
TTCGCCGCCTCTCGGCCGGT+TGG | + | chr3_4:47383972-47383991 | Msa0503790:CDS | 75.0% | |
GGGACCAACCGGCCGAGAGG+CGG | - | chr3_4:47383979-47383998 | None:intergenic | 75.0% | |
! | GTCGCCGCCTTTCGGCCGGG+TGG | + | chr3_4:47374957-47374976 | Msa0503790:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 47373618 | 47384307 | 47373618 | ID=Msa0503790;Name=Msa0503790 |
chr3_4 | mRNA | 47373618 | 47384307 | 47373618 | ID=Msa0503790-mRNA-1;Parent=Msa0503790;Name=Msa0503790-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.5|0.22|1|0.62|0.44|9|202|503 |
chr3_4 | exon | 47373618 | 47373689 | 47373618 | ID=Msa0503790-mRNA-1:exon:10187;Parent=Msa0503790-mRNA-1 |
chr3_4 | exon | 47374016 | 47374145 | 47374016 | ID=Msa0503790-mRNA-1:exon:10188;Parent=Msa0503790-mRNA-1 |
chr3_4 | exon | 47374179 | 47374412 | 47374179 | ID=Msa0503790-mRNA-1:exon:10189;Parent=Msa0503790-mRNA-1 |
chr3_4 | exon | 47374587 | 47374732 | 47374587 | ID=Msa0503790-mRNA-1:exon:10190;Parent=Msa0503790-mRNA-1 |
chr3_4 | exon | 47374845 | 47375054 | 47374845 | ID=Msa0503790-mRNA-1:exon:10191;Parent=Msa0503790-mRNA-1 |
chr3_4 | exon | 47381250 | 47381462 | 47381250 | ID=Msa0503790-mRNA-1:exon:10192;Parent=Msa0503790-mRNA-1 |
chr3_4 | exon | 47381481 | 47381595 | 47381481 | ID=Msa0503790-mRNA-1:exon:10193;Parent=Msa0503790-mRNA-1 |
chr3_4 | exon | 47383611 | 47383756 | 47383611 | ID=Msa0503790-mRNA-1:exon:10194;Parent=Msa0503790-mRNA-1 |
chr3_4 | exon | 47383860 | 47384307 | 47383860 | ID=Msa0503790-mRNA-1:exon:10195;Parent=Msa0503790-mRNA-1 |
chr3_4 | CDS | 47373618 | 47373689 | 47373618 | ID=Msa0503790-mRNA-1:cds;Parent=Msa0503790-mRNA-1 |
chr3_4 | CDS | 47374016 | 47374145 | 47374016 | ID=Msa0503790-mRNA-1:cds;Parent=Msa0503790-mRNA-1 |
chr3_4 | CDS | 47374179 | 47374412 | 47374179 | ID=Msa0503790-mRNA-1:cds;Parent=Msa0503790-mRNA-1 |
chr3_4 | CDS | 47374587 | 47374732 | 47374587 | ID=Msa0503790-mRNA-1:cds;Parent=Msa0503790-mRNA-1 |
chr3_4 | CDS | 47374845 | 47375054 | 47374845 | ID=Msa0503790-mRNA-1:cds;Parent=Msa0503790-mRNA-1 |
chr3_4 | CDS | 47381250 | 47381462 | 47381250 | ID=Msa0503790-mRNA-1:cds;Parent=Msa0503790-mRNA-1 |
chr3_4 | CDS | 47381481 | 47381595 | 47381481 | ID=Msa0503790-mRNA-1:cds;Parent=Msa0503790-mRNA-1 |
chr3_4 | CDS | 47383611 | 47383756 | 47383611 | ID=Msa0503790-mRNA-1:cds;Parent=Msa0503790-mRNA-1 |
chr3_4 | CDS | 47383860 | 47384105 | 47383860 | ID=Msa0503790-mRNA-1:cds;Parent=Msa0503790-mRNA-1 |
chr3_4 | three_prime_UTR | 47384106 | 47384307 | 47384106 | ID=Msa0503790-mRNA-1:three_prime_utr;Parent=Msa0503790-mRNA-1 |
Gene Sequence |
Protein sequence |