AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0504400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0504400 MtrunA17_Chr3g0104491 91.450 269 16 2 184 445 17 285 7.02e-170 478
Msa0504400 MtrunA17_Chr3g0104501 95.676 185 7 1 1 185 1 184 6.02e-129 370
Msa0504400 MtrunA17_Chr5g0429661 48.780 410 139 16 5 409 11 354 4.02e-110 328
Msa0504400 MtrunA17_Chr3g0117511 45.455 242 98 6 28 262 92 306 1.87e-59 201
Msa0504400 MtrunA17_Chr4g0058991 65.649 131 40 1 132 262 207 332 3.26e-57 195
Msa0504400 MtrunA17_Chr7g0228531 52.349 149 65 3 130 278 216 358 2.68e-49 173
Msa0504400 MtrunA17_Chr7g0228481 52.555 137 59 3 130 266 216 346 2.20e-43 157
Msa0504400 MtrunA17_Chr7g0238631 60.714 112 44 0 123 234 102 213 9.76e-41 153
Msa0504400 MtrunA17_Chr1g0177901 53.279 122 53 1 145 266 5 122 9.91e-41 144
Msa0504400 MtrunA17_Chr7g0228401 32.394 284 139 5 17 266 143 407 1.51e-40 151
Msa0504400 MtrunA17_Chr3g0139671 56.250 112 49 0 123 234 74 185 2.16e-38 148
Msa0504400 MtrunA17_Chr7g0233061 50.758 132 60 2 133 264 179 305 1.65e-37 140
Msa0504400 MtrunA17_Chr1g0157731 54.464 112 51 0 123 234 80 191 1.84e-37 145
Msa0504400 MtrunA17_Chr5g0397841 46.259 147 66 2 95 228 58 204 1.42e-36 140
Msa0504400 MtrunA17_Chr4g0008551 52.941 102 48 0 133 234 37 138 4.22e-34 130
Msa0504400 MtrunA17_Chr4g0053431 50.000 104 52 0 133 236 4 107 1.63e-31 121
Msa0504400 MtrunA17_Chr3g0133601 50.000 102 51 0 133 234 36 137 4.78e-31 119
Msa0504400 MtrunA17_Chr6g0452271 43.056 144 76 4 123 263 3 143 1.22e-30 120
Msa0504400 MtrunA17_Chr5g0401731 48.077 104 54 0 133 236 14 117 2.25e-30 120
Msa0504400 MtrunA17_Chr1g0193371 44.203 138 71 4 132 267 12 145 3.51e-30 120
Msa0504400 MtrunA17_Chr4g0042501 50.000 112 53 1 134 242 105 216 5.33e-30 120
Msa0504400 MtrunA17_Chr8g0342541 50.485 103 48 2 134 234 14 115 6.13e-30 119
Msa0504400 MtrunA17_Chr5g0417621 46.400 125 64 1 121 242 121 245 1.22e-29 120
Msa0504400 MtrunA17_Chr4g0022901 41.606 137 75 3 120 252 1 136 1.84e-29 116
Msa0504400 MtrunA17_Chr8g0342521 51.456 103 47 2 134 234 14 115 2.02e-29 117
Msa0504400 MtrunA17_Chr2g0323351 35.981 214 118 7 132 336 12 215 2.56e-29 115
Msa0504400 MtrunA17_Chr6g0460661 48.515 101 52 0 134 234 16 116 2.64e-29 112
Msa0504400 MtrunA17_Chr6g0480581 51.000 100 49 0 134 233 4 103 2.69e-29 114
Msa0504400 MtrunA17_Chr7g0270891 38.462 182 100 6 132 306 12 188 3.82e-29 117
Msa0504400 MtrunA17_Chr1g0193801 37.173 191 94 5 132 299 12 199 3.92e-29 117
Msa0504400 MtrunA17_Chr7g0254261 39.634 164 89 2 134 293 89 246 6.77e-29 116
Msa0504400 MtrunA17_Chr4g0055981 43.307 127 68 3 134 259 57 180 6.82e-29 113
Msa0504400 MtrunA17_Chr2g0281071 43.966 116 64 1 120 234 1 116 7.95e-29 115
Msa0504400 MtrunA17_Chr5g0434571 41.379 145 71 4 102 234 9 151 9.02e-29 116
Msa0504400 MtrunA17_Chr5g0397231 48.454 97 49 1 134 229 14 110 9.85e-29 115
Msa0504400 MtrunA17_Chr5g0437321 47.959 98 51 0 133 230 18 115 1.21e-28 114
Msa0504400 MtrunA17_Chr3g0125801 50.435 115 54 1 131 242 13 127 1.56e-28 114
Msa0504400 MtrunA17_Chr4g0037141 38.286 175 92 6 134 298 14 182 1.60e-28 114
Msa0504400 MtrunA17_Chr5g0410961 42.241 116 65 2 120 234 1 115 1.72e-28 115
Msa0504400 MtrunA17_Chr4g0048511 44.444 117 62 2 120 234 1 116 1.74e-28 115
Msa0504400 MtrunA17_Chr3g0117091 47.619 105 52 2 132 234 12 115 3.27e-28 114
Msa0504400 MtrunA17_Chr2g0330041 47.573 103 51 2 134 234 14 115 3.29e-28 115
Msa0504400 MtrunA17_Chr3g0110351 32.701 211 135 5 120 328 1 206 3.84e-28 113
Msa0504400 MtrunA17_Chr8g0342481 49.038 104 49 3 134 234 14 116 3.97e-28 115
Msa0504400 MtrunA17_Chr7g0271241 51.515 99 45 2 132 228 12 109 4.43e-28 114
Msa0504400 MtrunA17_Chr1g0211161 47.619 105 52 2 132 234 13 116 4.90e-28 110
Msa0504400 MtrunA17_Chr6g0454921 44.231 104 58 0 133 236 14 117 6.81e-28 110
Msa0504400 MtrunA17_Chr2g0328771 45.378 119 61 3 132 247 20 137 7.93e-28 112
Msa0504400 MtrunA17_Chr6g0460671 48.039 102 53 0 133 234 98 199 8.87e-28 113
Msa0504400 MtrunA17_Chr2g0309911 45.631 103 53 2 134 234 13 114 9.66e-28 112
Msa0504400 MtrunA17_Chr4g0058631 34.857 175 94 4 132 305 12 167 1.05e-27 113
Msa0504400 MtrunA17_Chr4g0032401 44.915 118 63 2 132 247 17 134 1.06e-27 112
Msa0504400 MtrunA17_Chr3g0088461 42.735 117 66 1 119 234 9 125 1.11e-27 112
Msa0504400 MtrunA17_Chr4g0022931 42.735 117 64 2 120 234 1 116 1.15e-27 111
Msa0504400 MtrunA17_Chr3g0115821 46.154 117 59 3 120 234 1 115 1.69e-27 112
Msa0504400 MtrunA17_Chr4g0039971 44.915 118 61 3 119 234 1 116 2.44e-27 112
Msa0504400 MtrunA17_Chr8g0385321 44.340 106 57 2 134 237 14 119 2.70e-27 111
Msa0504400 MtrunA17_Chr3g0103281 42.647 136 74 3 134 268 14 146 2.70e-27 111
Msa0504400 MtrunA17_Chr8g0349261 44.444 117 63 1 120 234 1 117 3.11e-27 110
Msa0504400 MtrunA17_Chr5g0435101 46.602 103 52 2 134 234 13 114 3.14e-27 108
Msa0504400 MtrunA17_Chr4g0057031 44.444 117 61 3 120 234 1 115 3.19e-27 110
Msa0504400 MtrunA17_Chr4g0022911 41.026 117 66 2 120 234 1 116 4.24e-27 110
Msa0504400 MtrunA17_Chr7g0217741 45.299 117 60 3 120 234 1 115 7.49e-27 109
Msa0504400 MtrunA17_Chr8g0346561 41.353 133 76 2 120 251 1 132 1.06e-26 108
Msa0504400 MtrunA17_Chr3g0099131 48.571 105 52 2 132 234 41 145 1.37e-26 112
Msa0504400 MtrunA17_Chr4g0044421 41.228 114 66 1 122 234 2 115 1.60e-26 105
Msa0504400 MtrunA17_Chr8g0387421 43.137 102 57 1 134 234 14 115 1.70e-26 108
Msa0504400 MtrunA17_Chr3g0131121 36.585 164 79 5 134 294 14 155 1.75e-26 108
Msa0504400 MtrunA17_Chr4g0042671 42.017 119 67 2 120 237 1 118 1.91e-26 110
Msa0504400 MtrunA17_Chr7g0228891 43.590 117 62 3 120 234 1 115 2.74e-26 107
Msa0504400 MtrunA17_Chr2g0323411 43.966 116 63 2 120 234 1 115 4.27e-26 108
Msa0504400 MtrunA17_Chr5g0395281 44.762 105 55 2 132 234 12 115 8.40e-26 106
Msa0504400 MtrunA17_Chr4g0030881 43.860 114 56 2 134 239 9 122 9.42e-26 105
Msa0504400 MtrunA17_Chr3g0080861 48.571 105 50 3 132 233 37 140 1.19e-25 109
Msa0504400 MtrunA17_Chr1g0186061 29.167 216 121 4 134 323 22 231 1.98e-25 104
Msa0504400 MtrunA17_Chr4g0013361 50.000 102 49 2 134 233 12 113 2.15e-25 105
Msa0504400 MtrunA17_Chr8g0354661 46.226 106 54 2 132 235 37 141 2.67e-25 108
Msa0504400 MtrunA17_Chr4g0070611 44.144 111 60 2 120 229 1 110 2.90e-25 105
Msa0504400 MtrunA17_Chr1g0167661 35.354 198 99 7 132 317 12 192 2.91e-25 103
Msa0504400 MtrunA17_Chr5g0417821 41.818 110 63 1 129 237 4 113 4.64e-25 104
Msa0504400 MtrunA17_Chr7g0240821 50.526 95 44 2 137 229 6 99 4.83e-25 102
Msa0504400 MtrunA17_Chr8g0343831 48.148 108 50 2 122 228 3 105 4.97e-25 103
Msa0504400 MtrunA17_Chr2g0327821 34.591 159 93 3 134 290 8 157 6.83e-25 102
Msa0504400 MtrunA17_Chr7g0261281 40.288 139 70 4 120 247 1 137 7.09e-25 103
Msa0504400 MtrunA17_Chr1g0154031 46.667 105 53 2 132 234 76 179 7.30e-25 105
Msa0504400 MtrunA17_Chr4g0070641 44.545 110 59 2 120 228 1 109 7.66e-25 100
Msa0504400 MtrunA17_Chr7g0274581 31.863 204 113 5 134 328 14 200 1.04e-24 101
Msa0504400 MtrunA17_Chr7g0275911 44.144 111 60 2 120 229 1 110 1.09e-24 102
Msa0504400 MtrunA17_Chr1g0168661 42.400 125 64 3 134 256 23 141 1.18e-24 102
Msa0504400 MtrunA17_Chr1g0203411 45.133 113 58 3 134 243 14 125 1.27e-24 103
Msa0504400 MtrunA17_Chr6g0453471 42.241 116 65 2 120 234 1 115 2.15e-24 103
Msa0504400 MtrunA17_Chr8g0334881 49.020 102 50 2 134 233 12 113 2.70e-24 102
Msa0504400 MtrunA17_Chr7g0233151 54.762 84 31 2 184 266 1 78 4.13e-24 98.6
Msa0504400 MtrunA17_Chr1g0192411 44.860 107 58 1 129 234 9 115 4.63e-24 103
Msa0504400 MtrunA17_Chr1g0180391 47.959 98 48 2 132 227 19 115 5.55e-24 99.8
Msa0504400 MtrunA17_Chr6g0470971 31.959 194 128 3 124 315 6 197 5.92e-24 100
Msa0504400 MtrunA17_Chr4g0068061 42.735 117 63 3 120 234 1 115 7.34e-24 102
Msa0504400 MtrunA17_Chr4g0060721 36.090 133 84 1 123 254 4 136 8.11e-24 101
Msa0504400 MtrunA17_Chr5g0434931 42.453 106 60 1 134 238 37 142 1.01e-23 100
Msa0504400 MtrunA17_Chr3g0121241 43.269 104 58 1 127 229 37 140 2.13e-23 100
Msa0504400 MtrunA17_Chr1g0209661 41.346 104 60 1 132 234 27 130 2.31e-23 100
Msa0504400 MtrunA17_Chr7g0228991 45.361 97 52 1 134 229 31 127 2.65e-23 99.0
Msa0504400 MtrunA17_Chr5g0434911 40.000 115 68 1 125 238 14 128 3.26e-23 99.0
Msa0504400 MtrunA17_Chr7g0228231 40.179 112 66 1 134 244 16 127 4.14e-23 96.7
Msa0504400 MtrunA17_Chr5g0421201 39.041 146 67 4 186 322 12 144 4.94e-23 95.9
Msa0504400 MtrunA17_Chr7g0217221 39.516 124 69 2 123 245 3 121 5.03e-23 98.2
Msa0504400 MtrunA17_Chr5g0441141 45.631 103 52 3 134 233 14 115 5.59e-23 98.2
Msa0504400 MtrunA17_Chr5g0440761 45.631 103 52 3 134 233 14 115 5.63e-23 97.8
Msa0504400 MtrunA17_Chr5g0440781 45.631 103 52 3 134 233 14 115 6.58e-23 95.5
Msa0504400 MtrunA17_Chr1g0187761 37.405 131 79 2 123 251 3 132 6.86e-23 97.4
Msa0504400 MtrunA17_Chr7g0220341 43.269 104 56 1 129 229 22 125 1.48e-22 97.1
Msa0504400 MtrunA17_Chr1g0203441 40.952 105 61 1 134 237 15 119 1.57e-22 96.7
Msa0504400 MtrunA17_Chr3g0092401 38.938 113 68 1 123 234 4 116 2.18e-22 97.1
Msa0504400 MtrunA17_Chr5g0441131 43.636 110 58 3 128 234 5 113 2.37e-22 94.0
Msa0504400 MtrunA17_Chr2g0327351 41.964 112 62 3 120 229 1 111 3.68e-22 96.7
Msa0504400 MtrunA17_Chr4g0022891 37.288 118 70 3 134 249 14 129 4.54e-22 94.7
Msa0504400 MtrunA17_Chr4g0022881 41.837 98 54 2 134 229 14 110 4.81e-22 94.4
Msa0504400 MtrunA17_Chr6g0450101 46.875 96 48 2 134 227 16 110 6.11e-22 93.6
Msa0504400 MtrunA17_Chr5g0400821 31.937 191 117 5 120 299 1 189 6.37e-22 95.9
Msa0504400 MtrunA17_Chr1g0152011 39.231 130 74 4 120 245 1 129 7.92e-22 96.3
Msa0504400 MtrunA17_Chr1g0167691 42.857 105 57 2 132 234 12 115 8.76e-22 94.4
Msa0504400 MtrunA17_Chr6g0453211 40.187 107 63 1 123 228 3 109 9.37e-22 95.5
Msa0504400 MtrunA17_Chr7g0247131 50.000 78 37 1 159 234 4 81 9.46e-22 94.4
Msa0504400 MtrunA17_Chr4g0054391 38.281 128 76 3 120 245 1 127 1.00e-21 95.1
Msa0504400 MtrunA17_Chr4g0046181 66.102 59 20 0 132 190 219 277 1.07e-21 94.7
Msa0504400 MtrunA17_Chr4g0028311 40.171 117 67 3 120 234 1 116 1.36e-21 95.1
Msa0504400 MtrunA17_Chr5g0434841 41.346 104 60 1 132 234 20 123 1.96e-21 94.7
Msa0504400 MtrunA17_Chr5g0434831 42.308 104 59 1 132 234 7 110 1.96e-21 91.7
Msa0504400 MtrunA17_Chr1g0194301 34.028 144 89 3 134 275 35 174 2.34e-21 93.6
Msa0504400 MtrunA17_Chr5g0416341 41.837 98 57 0 137 234 29 126 2.56e-21 96.3
Msa0504400 MtrunA17_Chr2g0311221 40.909 110 63 2 121 229 4 112 2.75e-21 94.4
Msa0504400 MtrunA17_Chr3g0135311 39.370 127 73 4 120 244 1 125 2.88e-21 94.7
Msa0504400 MtrunA17_Chr2g0322521 50.000 106 49 3 132 234 29 133 3.32e-21 95.1
Msa0504400 MtrunA17_Chr1g0194951 43.590 117 62 3 120 234 1 115 5.99e-21 94.0
Msa0504400 MtrunA17_Chr7g0254411 37.168 113 70 1 123 234 3 115 6.60e-21 93.6
Msa0504400 MtrunA17_Chr1g0151941 38.835 103 61 2 134 234 14 116 8.03e-21 91.7
Msa0504400 MtrunA17_Chr7g0238651 31.892 185 114 4 134 312 7 185 2.57e-20 92.0
Msa0504400 MtrunA17_Chr8g0362231 38.776 98 60 0 137 234 25 122 2.79e-20 92.8
Msa0504400 MtrunA17_Chr7g0264641 36.486 148 83 6 120 261 1 143 2.89e-20 90.5
Msa0504400 MtrunA17_Chr8g0360111 42.268 97 55 1 134 229 27 123 3.27e-20 90.1
Msa0504400 MtrunA17_Chr7g0233161 69.811 53 16 0 133 185 298 350 1.62e-19 89.7
Msa0504400 MtrunA17_Chr1g0194291 39.252 107 64 1 134 239 23 129 3.14e-19 87.0
Msa0504400 MtrunA17_Chr4g0072751 40.179 112 64 3 120 229 1 111 3.90e-19 88.6
Msa0504400 MtrunA17_Chr2g0293911 41.414 99 57 1 130 227 22 120 2.92e-18 85.5
Msa0504400 MtrunA17_Chr3g0099141 44.578 83 45 1 131 212 39 121 3.61e-18 80.9
Msa0504400 MtrunA17_Chr7g0269831 44.444 117 61 3 120 234 1 115 8.67e-18 84.3
Msa0504400 MtrunA17_Chr6g0487491 35.200 125 70 4 120 234 1 124 9.77e-18 82.8
Msa0504400 MtrunA17_Chr2g0323321 43.902 82 43 2 132 211 11 91 1.02e-17 79.0
Msa0504400 MtrunA17_Chr4g0068921 41.414 99 57 1 130 227 22 120 1.07e-17 81.3
Msa0504400 MtrunA17_Chr8g0342531 46.835 79 39 2 134 210 14 91 1.07e-17 80.5
Msa0504400 MtrunA17_Chr4g0042611 41.573 89 50 2 120 207 1 88 1.76e-17 77.4
Msa0504400 MtrunA17_Chr8g0342461 47.436 78 37 3 134 208 14 90 3.28e-17 78.2
Msa0504400 MtrunA17_Chr8g0342471 46.154 78 38 3 134 208 14 90 1.23e-16 76.6
Msa0504400 MtrunA17_Chr5g0434901 46.970 66 35 0 167 232 9 74 1.76e-16 75.5
Msa0504400 MtrunA17_Chr8g0342511 46.667 75 37 2 134 206 14 87 2.00e-16 74.7
Msa0504400 MtrunA17_Chr7g0229101 45.455 66 36 0 167 232 8 73 1.69e-15 75.1
Msa0504400 MtrunA17_Chr3g0093811 40.217 92 52 2 167 258 18 106 2.77e-15 75.9
Msa0504400 MtrunA17_Chr5g0395221 39.744 78 46 1 131 207 11 88 6.00e-15 70.1
Msa0504400 MtrunA17_Chr2g0294811 41.758 91 47 3 120 207 1 88 1.20e-14 70.5
Msa0504400 MtrunA17_Chr7g0229131 32.836 134 84 4 167 299 8 136 1.75e-14 71.2
Msa0504400 MtrunA17_Chr5g0425591 42.045 88 47 3 128 212 5 91 1.70e-13 66.2
Msa0504400 MtrunA17_Chr6g0453751 40.659 91 44 4 132 212 20 110 2.87e-13 66.6
Msa0504400 MtrunA17_Chr6g0483051 37.113 97 60 1 131 227 66 161 4.44e-13 71.2
Msa0504400 MtrunA17_Chr6g0483051 36.275 102 64 1 126 227 112 212 1.80e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0504400 AT5G11050.1 38.987 454 186 13 23 442 16 412 1.61e-82 260
Msa0504400 AT5G58850.1 38.074 457 198 14 23 442 11 419 1.23e-76 245
Msa0504400 AT4G18770.1 61.688 154 50 2 125 278 208 352 4.70e-60 202
Msa0504400 AT3G27785.1 60.135 148 46 2 122 263 177 317 1.85e-54 187
Msa0504400 AT5G40360.1 54.615 130 56 1 134 263 158 284 1.78e-47 167
Msa0504400 AT3G09370.3 47.399 173 80 3 123 290 132 298 8.11e-41 152
Msa0504400 AT3G09370.1 47.368 171 79 3 125 290 121 285 8.74e-41 152
Msa0504400 AT3G09370.2 47.368 171 79 3 125 290 126 290 9.30e-41 152
Msa0504400 AT5G02320.1 60.909 110 43 0 125 234 118 227 1.20e-40 152
Msa0504400 AT5G02320.2 60.909 110 43 0 125 234 118 227 1.20e-40 152
Msa0504400 AT5G02320.3 60.714 112 44 0 123 234 56 167 1.41e-40 151
Msa0504400 AT2G25230.1 46.667 150 72 3 115 263 8 150 2.59e-38 139
Msa0504400 AT5G11510.3 52.679 112 53 0 123 234 70 181 9.78e-37 144
Msa0504400 AT5G11510.1 52.679 112 53 0 123 234 70 181 9.78e-37 144
Msa0504400 AT5G11510.4 52.679 112 53 0 123 234 70 181 9.78e-37 144
Msa0504400 AT5G11510.5 52.679 112 53 0 123 234 70 181 9.83e-37 143
Msa0504400 AT5G11510.2 52.679 112 53 0 123 234 70 181 1.07e-36 143
Msa0504400 AT4G32730.1 39.444 180 101 2 123 301 76 248 2.88e-36 142
Msa0504400 AT4G32730.5 39.444 180 101 2 123 301 76 248 3.80e-36 142
Msa0504400 AT4G32730.4 39.444 180 101 2 123 301 76 248 3.80e-36 142
Msa0504400 AT4G32730.3 39.444 180 101 2 123 301 76 248 3.80e-36 142
Msa0504400 AT4G32730.2 39.444 180 101 2 123 301 76 248 3.80e-36 142
Msa0504400 AT5G40430.1 44.604 139 71 3 125 263 45 177 3.15e-35 131
Msa0504400 AT3G55730.1 53.846 104 48 0 131 234 53 156 2.97e-32 127
Msa0504400 AT1G17950.1 34.921 189 111 3 134 318 5 185 1.10e-31 122
Msa0504400 AT3G28470.1 45.255 137 71 3 123 258 3 136 1.91e-31 123
Msa0504400 AT4G00540.2 55.357 112 47 1 126 234 95 206 8.62e-31 123
Msa0504400 AT1G69560.2 43.885 139 75 1 115 250 104 242 1.38e-30 121
Msa0504400 AT1G69560.1 43.885 139 75 1 115 250 88 226 1.39e-30 120
Msa0504400 AT4G00540.1 55.357 112 47 1 126 234 93 204 2.09e-30 122
Msa0504400 AT3G09230.1 50.980 102 50 0 133 234 54 155 4.86e-30 120
Msa0504400 AT1G09540.1 37.356 174 105 3 132 303 12 183 1.09e-29 119
Msa0504400 AT1G26780.2 31.538 260 147 5 132 386 96 329 1.60e-29 118
Msa0504400 AT1G66230.1 37.438 203 118 7 120 318 1 198 1.90e-29 116
Msa0504400 AT5G26660.1 48.276 116 56 3 132 245 12 125 1.97e-29 118
Msa0504400 AT3G50060.1 46.154 104 56 0 133 236 5 108 4.13e-29 116
Msa0504400 AT1G57560.1 49.524 105 50 2 132 234 12 115 6.98e-29 115
Msa0504400 AT1G57560.2 49.524 105 50 2 132 234 12 115 7.94e-29 114
Msa0504400 AT1G26780.1 48.246 114 56 1 132 242 96 209 1.11e-28 114
Msa0504400 AT2G39880.1 49.038 104 53 0 131 234 47 150 1.17e-28 116
Msa0504400 AT5G67300.1 47.059 102 54 0 133 234 5 106 1.22e-28 115
Msa0504400 AT3G12720.1 46.602 103 52 2 134 234 24 125 1.79e-28 114
Msa0504400 AT4G37260.1 47.115 104 55 0 133 236 12 115 1.88e-28 114
Msa0504400 AT3G11440.2 43.077 130 66 3 109 236 24 147 1.89e-28 117
Msa0504400 AT4G33450.1 49.074 108 52 1 131 235 16 123 2.79e-28 112
Msa0504400 AT1G63910.1 40.909 132 72 2 134 264 14 140 2.82e-28 115
Msa0504400 AT3G29020.1 43.333 120 68 0 134 253 65 184 3.58e-28 112
Msa0504400 AT1G18570.1 43.750 128 70 2 122 248 3 129 5.51e-28 114
Msa0504400 AT3G11440.3 43.077 130 66 3 109 236 24 147 5.88e-28 116
Msa0504400 AT3G11440.4 43.077 130 66 3 109 236 24 147 5.88e-28 116
Msa0504400 AT3G11440.1 43.077 130 66 3 109 236 24 147 5.88e-28 116
Msa0504400 AT3G13890.2 45.098 102 55 1 134 234 14 115 6.44e-28 114
Msa0504400 AT4G26930.1 42.975 121 57 2 114 233 12 121 7.06e-28 114
Msa0504400 AT4G01680.1 46.154 104 55 1 132 234 12 115 7.69e-28 113
Msa0504400 AT4G05100.1 43.966 116 64 1 120 234 1 116 8.21e-28 113
Msa0504400 AT4G28110.1 46.667 105 55 1 134 237 14 118 8.35e-28 112
Msa0504400 AT4G01680.3 46.154 104 55 1 132 234 12 115 1.15e-27 110
Msa0504400 AT2G23290.1 47.115 104 55 0 133 236 12 115 1.19e-27 112
Msa0504400 AT3G29020.2 43.333 120 68 0 134 253 67 186 1.27e-27 112
Msa0504400 AT4G12350.1 44.444 117 61 3 120 234 1 115 1.79e-27 111
Msa0504400 AT5G35550.1 41.353 133 71 2 113 244 1 127 3.29e-27 109
Msa0504400 AT3G13890.1 42.342 111 54 2 134 234 14 124 3.94e-27 112
Msa0504400 AT5G14750.1 48.454 97 49 1 134 229 18 114 4.26e-27 108
Msa0504400 AT1G74430.1 40.625 128 74 2 131 257 11 137 4.44e-27 109
Msa0504400 AT5G16770.4 43.103 116 64 2 120 234 1 115 5.12e-27 110
Msa0504400 AT5G16770.3 43.103 116 64 2 120 234 1 115 5.12e-27 110
Msa0504400 AT4G21440.1 46.154 104 55 1 132 234 12 115 5.51e-27 111
Msa0504400 AT5G16770.1 43.103 116 64 2 120 234 1 115 6.56e-27 110
Msa0504400 AT5G16770.2 43.103 116 64 2 120 234 1 115 6.56e-27 110
Msa0504400 AT5G06100.1 47.222 108 55 2 131 236 31 138 8.56e-27 112
Msa0504400 AT4G38620.1 46.602 103 52 2 134 234 14 115 1.05e-26 108
Msa0504400 AT5G17800.1 45.217 115 61 1 134 246 93 207 1.23e-26 109
Msa0504400 AT4G01680.2 43.103 116 53 2 132 234 12 127 1.23e-26 110
Msa0504400 AT5G10280.1 44.444 117 61 3 120 234 1 115 1.80e-26 109
Msa0504400 AT3G02940.2 43.103 116 64 2 120 234 1 115 2.00e-26 108
Msa0504400 AT4G22680.1 35.437 206 125 5 120 323 1 200 2.03e-26 107
Msa0504400 AT5G06100.5 47.222 108 55 2 131 236 31 138 2.08e-26 112
Msa0504400 AT5G06100.2 47.222 108 55 2 131 236 31 138 2.08e-26 112
Msa0504400 AT5G06100.3 47.222 108 55 2 131 236 31 138 2.08e-26 112
Msa0504400 AT5G06100.4 47.222 108 55 2 131 236 31 138 2.08e-26 112
Msa0504400 AT5G65230.1 44.444 117 61 3 120 234 1 115 2.64e-26 108
Msa0504400 AT5G12870.1 46.078 102 54 1 134 234 20 121 2.90e-26 107
Msa0504400 AT3G61250.1 44.444 117 61 3 120 234 1 115 2.91e-26 108
Msa0504400 AT3G02940.1 43.103 116 64 2 120 234 1 115 3.58e-26 108
Msa0504400 AT3G02940.3 43.103 116 64 2 120 234 1 115 3.58e-26 108
Msa0504400 AT3G53200.1 32.995 197 118 4 131 320 8 197 3.66e-26 106
Msa0504400 AT5G15310.1 43.103 116 64 2 120 234 1 115 4.02e-26 108
Msa0504400 AT3G08500.1 47.115 104 54 1 132 234 30 133 4.07e-26 108
Msa0504400 AT5G15310.4 43.103 116 64 2 120 234 1 115 4.17e-26 106
Msa0504400 AT5G40330.1 32.961 179 98 3 134 311 14 171 4.22e-26 105
Msa0504400 AT5G15310.2 43.103 116 64 2 120 234 1 115 4.25e-26 108
Msa0504400 AT1G73410.1 50.467 107 50 1 134 237 6 112 5.59e-26 106
Msa0504400 AT5G14340.1 41.606 137 73 5 120 254 13 144 6.62e-26 106
Msa0504400 AT2G26960.1 45.192 104 56 1 131 233 19 122 7.10e-26 109
Msa0504400 AT5G55020.1 44.660 103 56 1 132 233 26 128 8.50e-26 110
Msa0504400 AT1G74080.1 48.485 99 50 1 132 229 12 110 8.55e-26 107
Msa0504400 AT1G73410.2 50.467 107 50 1 134 237 6 112 8.72e-26 104
Msa0504400 AT3G01140.2 43.103 116 64 2 120 234 1 115 1.04e-25 107
Msa0504400 AT2G32460.2 47.170 106 52 3 132 234 6 110 1.37e-25 109
Msa0504400 AT2G32460.1 47.170 106 52 3 132 234 18 122 1.40e-25 109
Msa0504400 AT1G35515.1 34.524 168 95 4 134 286 14 181 1.56e-25 103
Msa0504400 AT4G09460.1 30.769 182 115 3 134 305 14 194 1.58e-25 104
Msa0504400 AT5G56110.1 42.647 136 74 3 134 268 14 146 1.63e-25 106
Msa0504400 AT3G27920.1 46.392 97 51 1 134 229 16 112 1.78e-25 104
Msa0504400 AT1G22640.1 44.660 103 54 2 134 234 14 115 1.93e-25 105
Msa0504400 AT4G17785.2 42.735 117 64 2 120 234 1 116 1.98e-25 107
Msa0504400 AT4G17785.1 42.735 117 64 2 120 234 1 116 1.99e-25 107
Msa0504400 AT1G06180.1 32.864 213 115 8 120 325 1 192 3.45e-25 103
Msa0504400 AT3G24310.1 43.200 125 63 3 134 256 20 138 3.46e-25 104
Msa0504400 AT5G16600.1 44.531 128 66 4 120 245 1 125 3.87e-25 105
Msa0504400 AT3G01140.1 45.192 104 56 1 132 234 55 158 4.14e-25 106
Msa0504400 AT3G13540.1 40.833 120 69 2 127 245 18 136 4.15e-25 103
Msa0504400 AT5G54230.1 43.810 105 58 1 134 237 14 118 4.20e-25 105
Msa0504400 AT5G52600.1 32.995 197 103 5 134 323 14 188 4.80e-25 102
Msa0504400 AT5G07700.1 41.379 116 66 2 120 234 1 115 5.71e-25 105
Msa0504400 AT5G07700.2 41.379 116 66 2 120 234 1 115 5.71e-25 105
Msa0504400 AT3G23250.1 32.161 199 119 6 120 312 1 189 6.12e-25 104
Msa0504400 AT5G07690.1 42.609 115 64 2 120 233 1 114 6.29e-25 105
Msa0504400 AT5G60890.1 42.742 124 67 2 134 256 14 134 7.09e-25 104
Msa0504400 AT1G34670.1 41.379 116 66 2 120 234 1 115 1.34e-24 104
Msa0504400 AT5G61420.2 41.379 116 66 2 120 234 1 115 1.55e-24 104
Msa0504400 AT4G34990.1 43.396 106 59 1 134 238 14 119 1.65e-24 102
Msa0504400 AT5G59780.3 42.982 114 60 3 134 245 10 120 2.52e-24 101
Msa0504400 AT3G46130.1 44.444 108 57 2 134 239 11 117 3.07e-24 101
Msa0504400 AT2G16720.1 42.718 103 56 2 134 234 14 115 5.35e-24 101
Msa0504400 AT2G26950.1 41.667 108 54 2 131 233 15 118 6.53e-24 103
Msa0504400 AT3G48920.1 41.322 121 64 2 134 247 20 140 7.05e-24 100
Msa0504400 AT5G62320.1 33.163 196 115 7 121 302 3 196 1.12e-23 99.8
Msa0504400 AT2G47190.1 33.750 160 96 3 134 292 22 172 1.79e-23 99.8
Msa0504400 AT1G18710.1 41.509 106 61 1 134 238 14 119 2.23e-23 99.4
Msa0504400 AT4G13480.1 42.400 125 64 3 134 256 8 126 3.44e-23 99.0
Msa0504400 AT3G01530.1 35.714 168 93 5 134 294 27 186 3.46e-23 97.4
Msa0504400 AT5G62470.1 36.508 126 80 0 123 248 3 128 4.05e-23 100
Msa0504400 AT3G60460.1 48.039 102 51 2 134 233 13 114 4.88e-23 99.4
Msa0504400 AT3G30210.1 41.860 129 63 4 134 251 29 156 5.85e-23 98.6
Msa0504400 AT2G31180.1 39.231 130 75 3 120 247 1 128 6.50e-23 97.8
Msa0504400 AT5G39700.1 44.444 99 55 0 135 233 57 155 9.58e-23 95.5
Msa0504400 AT5G57620.1 41.353 133 72 5 120 247 1 132 1.39e-22 98.6
Msa0504400 AT3G47600.1 38.938 113 68 1 123 234 3 115 1.53e-22 98.6
Msa0504400 AT4G25560.1 44.118 102 56 1 134 234 12 113 1.87e-22 97.1
Msa0504400 AT5G26660.2 50.633 79 38 1 167 245 17 94 2.21e-22 97.8
Msa0504400 AT3G27810.1 37.410 139 78 2 134 271 22 152 2.25e-22 95.5
Msa0504400 AT1G74650.1 39.823 113 67 1 123 234 3 115 2.72e-22 97.8
Msa0504400 AT5G23000.1 41.880 117 65 3 120 234 1 116 3.22e-22 97.4
Msa0504400 AT5G49330.1 41.379 116 66 2 120 234 1 115 7.77e-22 96.7
Msa0504400 AT1G08810.1 34.228 149 96 2 123 269 3 151 8.35e-22 95.1
Msa0504400 AT5G35550.2 48.718 78 40 0 167 244 53 130 8.74e-22 94.7
Msa0504400 AT1G48000.1 34.641 153 91 2 134 285 34 178 9.94e-22 94.4
Msa0504400 AT1G56160.1 40.777 103 58 2 134 234 16 117 1.15e-21 95.1
Msa0504400 AT5G62470.2 36.220 127 80 1 123 248 3 129 1.38e-21 95.9
Msa0504400 AT1G68320.1 31.720 186 116 5 132 310 19 200 1.45e-21 94.7
Msa0504400 AT5G40350.1 45.263 95 51 1 134 227 19 113 1.90e-21 92.8
Msa0504400 AT3G62610.1 41.379 116 66 2 120 234 1 115 1.90e-21 95.5
Msa0504400 AT3G49690.1 41.129 124 68 4 120 239 1 123 2.41e-21 94.7
Msa0504400 AT1G25340.1 44.660 103 54 2 134 234 20 121 2.69e-21 94.0
Msa0504400 AT3G28910.1 39.823 113 67 1 123 234 3 115 3.63e-21 94.4
Msa0504400 AT1G79180.1 37.097 124 69 3 113 234 1 117 5.12e-21 93.2
Msa0504400 AT5G65790.1 41.129 124 68 4 120 239 1 123 6.87e-21 94.4
Msa0504400 AT1G16490.1 40.367 109 62 2 134 240 16 123 8.27e-21 92.4
Msa0504400 AT1G66370.1 38.211 123 70 2 120 241 1 118 8.71e-21 91.7
Msa0504400 AT2G47460.1 39.655 116 68 2 120 234 1 115 1.17e-20 93.6
Msa0504400 AT1G14350.2 39.796 98 59 0 137 234 28 125 1.29e-20 94.4
Msa0504400 AT1G14350.1 39.796 98 59 0 137 234 28 125 1.29e-20 94.4
Msa0504400 AT2G02820.2 40.816 98 58 0 137 234 33 130 1.69e-20 94.4
Msa0504400 AT1G25340.2 41.584 101 55 1 134 234 20 116 1.78e-20 91.7
Msa0504400 AT2G02820.1 40.816 98 58 0 137 234 33 130 2.07e-20 93.6
Msa0504400 AT2G02820.3 43.956 91 51 0 137 227 33 123 2.71e-20 92.0
Msa0504400 AT3G12820.1 37.815 119 71 2 122 238 4 121 3.41e-20 89.7
Msa0504400 AT1G25340.3 41.584 101 55 1 134 234 20 116 3.94e-20 90.9
Msa0504400 AT5G52260.1 43.103 116 59 3 121 234 5 115 3.94e-20 90.1
Msa0504400 AT4G37780.1 35.897 117 72 3 120 234 1 116 5.48e-20 90.5
Msa0504400 AT5G49620.1 29.018 224 138 4 134 344 28 243 5.53e-20 90.5
Msa0504400 AT5G14750.3 50.794 63 31 0 167 229 18 80 5.94e-20 87.0
Msa0504400 AT2G37630.1 35.036 137 84 2 136 267 6 142 8.21e-20 90.9
Msa0504400 AT1G66380.1 46.078 102 54 1 128 228 4 105 1.22e-19 85.5
Msa0504400 AT3G53200.2 32.704 159 96 2 167 320 12 164 1.25e-19 87.4
Msa0504400 AT1G56650.1 45.631 103 55 1 128 229 4 106 2.98e-19 87.4
Msa0504400 AT1G66390.1 46.078 102 54 1 128 228 4 105 1.72e-18 85.1
Msa0504400 AT3G06490.1 43.878 98 52 2 132 227 19 115 2.05e-18 86.3
Msa0504400 AT3G27810.2 39.048 105 56 1 167 271 7 103 8.31e-18 81.3
Msa0504400 AT1G79180.2 31.852 135 58 2 134 234 16 150 1.06e-17 84.3
Msa0504400 AT2G36890.1 36.752 117 71 3 120 234 1 116 1.76e-17 83.2
Msa0504400 AT5G59780.2 44.304 79 42 1 167 245 23 99 2.91e-17 80.9
Msa0504400 AT2G36890.2 36.752 117 71 3 120 234 42 157 3.66e-17 82.8
Msa0504400 AT5G40350.2 52.459 61 29 0 167 227 8 68 5.19e-17 79.0
Msa0504400 AT3G46130.4 45.205 73 40 0 167 239 23 95 6.44e-17 80.5
Msa0504400 AT3G47600.2 47.059 68 36 0 167 234 42 109 6.75e-17 82.0
Msa0504400 AT3G46130.3 45.205 73 40 0 167 239 13 85 7.24e-17 80.1
Msa0504400 AT5G49620.2 27.311 238 138 5 134 344 28 257 1.07e-16 81.3
Msa0504400 AT3G12820.2 44.444 72 40 0 167 238 2 73 7.30e-16 76.3
Msa0504400 AT3G18100.1 36.735 98 60 2 131 227 492 588 9.02e-15 77.4
Msa0504400 AT3G18100.1 36.170 94 60 0 134 227 546 639 5.38e-14 74.7
Msa0504400 AT1G22640.3 47.368 57 30 0 178 234 2 58 1.08e-14 73.2
Msa0504400 AT3G18100.3 36.735 98 60 2 131 227 444 540 1.27e-14 76.6
Msa0504400 AT3G18100.3 36.170 94 60 0 134 227 498 591 7.38e-14 74.3
Msa0504400 AT3G18100.4 36.735 98 60 2 131 227 331 427 1.58e-14 76.3
Msa0504400 AT3G18100.4 36.170 94 60 0 134 227 385 478 9.14e-14 73.9
Msa0504400 AT1G71030.2 40.000 65 39 0 170 234 5 69 1.83e-14 72.0
Msa0504400 AT3G18100.2 36.735 98 60 2 131 227 279 375 2.12e-14 75.9
Msa0504400 AT3G18100.2 36.170 94 60 0 134 227 333 426 1.22e-13 73.6
Msa0504400 AT1G71030.1 40.000 65 39 0 170 234 19 83 2.21e-14 72.0
Msa0504400 AT5G14750.4 39.706 68 41 0 178 245 2 69 2.93e-14 70.1
Msa0504400 AT5G14750.2 39.706 68 41 0 178 245 2 69 2.93e-14 70.1
Msa0504400 AT3G23250.2 30.216 139 85 3 178 312 2 132 5.19e-14 71.6
Msa0504400 AT1G66380.3 49.206 63 32 0 167 229 11 73 7.49e-13 65.1
Msa0504400 AT1G14350.3 43.333 60 34 0 175 234 23 82 1.71e-11 66.2
Msa0504400 AT1G14350.4 43.333 60 34 0 175 234 23 82 1.71e-11 66.2

Find 101 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGCTTTGTTGATCAGTTAT+TGG 0.199497 3_4:-48786150 Msa0504400:CDS
TGAATTTGGTTTAGGGTAAT+TGG 0.208552 3_4:+48783385 None:intergenic
CTGCCATTGATAGATTCTTA+TGG 0.247531 3_4:-48786310 Msa0504400:CDS
AGGGTTTGAAGAGGGTTTCT+TGG 0.262586 3_4:+48783484 None:intergenic
GAATCTGATTACTGTTAGTT+TGG 0.268681 3_4:+48783450 None:intergenic
TTCTTGGAGTAGGGGTTAAC+AGG 0.288498 3_4:+48783500 None:intergenic
GTCTCAAATAGCTGAGAAAT+TGG 0.291297 3_4:-48785387 Msa0504400:CDS
GAAGGTAGTGATCAGAATTA+AGG 0.315331 3_4:+48783315 None:intergenic
GAAGAGGGTTTCTTGGAGTA+GGG 0.325395 3_4:+48783491 None:intergenic
ATCATTGGAATGCAACAAAA+AGG 0.334346 3_4:-48783832 Msa0504400:CDS
GAAGAGAGAGATGGATTTGT+TGG 0.339685 3_4:-48783219 Msa0504400:CDS
TGCCATTGATAGATTCTTAT+GGG 0.346398 3_4:-48786309 Msa0504400:CDS
GACATCATATTATTATTATT+AGG 0.352512 3_4:+48786182 None:intergenic
ATTGCATTCTCAGTTCTTCC+TGG 0.352568 3_4:+48783860 None:intergenic
CTCCCTGATGTTACTGATTG+TGG 0.355914 3_4:-48783428 Msa0504400:CDS
AGAGATGGATTTGTTGGAGT+TGG 0.366710 3_4:-48783213 Msa0504400:CDS
GATCAAAATATTTATAGCTT+TGG 0.368101 3_4:-48786239 Msa0504400:CDS
GAAAATTTCATGAAACCAAT+TGG 0.372690 3_4:-48786398 None:intergenic
GAAGATGCGATCAATGGTTT+AGG 0.381677 3_4:-48786071 Msa0504400:CDS
AAGTGACATACTTTGATATC+AGG 0.394233 3_4:+48785314 None:intergenic
ATTAGGCCACATAAAACTAT+AGG 0.401368 3_4:+48786199 None:intergenic
AATCTGATTACTGTTAGTTT+GGG 0.404398 3_4:+48783451 None:intergenic
ATCACCAACCACTCTTCTAT+TGG 0.413518 3_4:-48786344 Msa0504400:CDS
TTAGTTTGGGAAGAATAGTA+AGG 0.415895 3_4:+48783464 None:intergenic
AGCAATATGGTGTAAGAAAA+TGG 0.419388 3_4:-48785409 Msa0504400:CDS
CCACCAATACGTACTCCAAT+TGG 0.419604 3_4:+48786383 None:intergenic
TTTAGGGTAATTGGAAGGAT+TGG 0.423178 3_4:+48783394 None:intergenic
AGAATGCAATAAAGAATCAT+TGG 0.427236 3_4:-48783847 Msa0504400:CDS
GAGATAGCAAAGAGAATTCC+AGG 0.427432 3_4:-48783878 Msa0504400:CDS
TGAAGAGGGTTTCTTGGAGT+AGG 0.427723 3_4:+48783490 None:intergenic
CTGAAGTTGGTGAAGCAATA+TGG 0.437823 3_4:-48785422 Msa0504400:CDS
CAAATGAAGAGGTGATGAAT+TGG 0.443517 3_4:-48786127 Msa0504400:CDS
GTAGAAACTCATGGCATGAT+TGG 0.452723 3_4:-48783914 Msa0504400:CDS
AAGGAAGATTGGTTTGAAGA+AGG 0.458004 3_4:+48783635 None:intergenic
GGAGTAGGGGTTAACAGGTT+CGG 0.458012 3_4:+48783505 None:intergenic
ACATGTTGCAGAAAGATAGT+TGG 0.459027 3_4:-48783961 Msa0504400:intron
ATTCAAGGAGAAAGAACAAA+AGG 0.472167 3_4:-48783802 Msa0504400:CDS
GAATTAAGGTAATTCATCAT+AGG 0.473352 3_4:+48783329 None:intergenic
AGGAAGATTGGTTTGAAGAA+GGG 0.477815 3_4:+48783636 None:intergenic
TTCTGAATTCCATTCAGCAT+TGG 0.479415 3_4:+48783290 None:intergenic
AATCCACAATCAGTAACATC+AGG 0.481489 3_4:+48783425 None:intergenic
TCAAAGGAAATTGCTGAAGT+TGG 0.481875 3_4:-48785435 Msa0504400:intron
TCTTTCTCCACACACAATGA+AGG 0.482009 3_4:+48786092 None:intergenic
TACCTTCCTCCAATGCTGAA+TGG 0.484131 3_4:-48783299 Msa0504400:CDS
GGAAAGGGTGCAAAAGTGGT+TGG 0.491374 3_4:-48786050 Msa0504400:CDS
AACAATGTGGAGTTGCATCT+TGG 0.493190 3_4:-48783263 Msa0504400:CDS
TGAATTCCATTCAGCATTGG+AGG 0.495675 3_4:+48783293 None:intergenic
GAATAGTAAGGGTTTGAAGA+GGG 0.496870 3_4:+48783476 None:intergenic
GGTTTACCATCAGTGGTTTG+AGG 0.505708 3_4:+48783779 None:intergenic
GAAAGCAGTGTAGGGAAAGA+TGG 0.507446 3_4:-48785352 Msa0504400:CDS
TTTAGGAAAGGGTGCAAAAG+TGG 0.509549 3_4:-48786054 Msa0504400:CDS
GAGAAATTGGAAGGAAGAGC+TGG 0.510204 3_4:-48785374 Msa0504400:CDS
TGAAAAGTTGTTGCATGAAG+AGG 0.512671 3_4:+48783543 None:intergenic
TGGCATGATTGGAAACCGTT+GGG 0.512956 3_4:-48783903 Msa0504400:CDS
GTTGGAGTGAAGAAGAAGAA+AGG 0.512967 3_4:-48783943 Msa0504400:CDS
AAACCAATTGGAGTACGTAT+TGG 0.519717 3_4:-48786386 Msa0504400:CDS
GCGATCAATGGTTTAGGAAA+GGG 0.521321 3_4:-48786065 Msa0504400:CDS
GAAGAGCTGGAAAGCAGTGT+AGG 0.523888 3_4:-48785361 Msa0504400:CDS
ATGGCATGATTGGAAACCGT+TGG 0.528169 3_4:-48783904 Msa0504400:CDS
AAGAGGGTTTCTTGGAGTAG+GGG 0.530916 3_4:+48783492 None:intergenic
AGTCCACTGTCCTTTGATCA+AGG 0.536979 3_4:+48785998 None:intergenic
GGCAATATGAATTTCTCAGA+GGG 0.541410 3_4:-48783242 Msa0504400:CDS
CCAATTGGAGTACGTATTGG+TGG 0.542694 3_4:-48786383 Msa0504400:CDS
AAGAGCTGGAAAGCAGTGTA+GGG 0.544280 3_4:-48785360 Msa0504400:CDS
AGATTGTGGTTTACCATCAG+TGG 0.552835 3_4:+48783772 None:intergenic
AGTAGTAGTAGCAGTAGTAC+CGG 0.553178 3_4:+48783700 None:intergenic
TGCGATCAATGGTTTAGGAA+AGG 0.553524 3_4:-48786066 Msa0504400:CDS
GAGAAAGAAGATGCGATCAA+TGG 0.556688 3_4:-48786077 Msa0504400:CDS
AGAATAGTAAGGGTTTGAAG+AGG 0.556843 3_4:+48783475 None:intergenic
TCTTGAAGAATAGAAGATTG+TGG 0.558587 3_4:+48783758 None:intergenic
ACCCCATAAGAATCTATCAA+TGG 0.560596 3_4:+48786307 None:intergenic
TTCCATTCAGCATTGGAGGA+AGG 0.564838 3_4:+48783297 None:intergenic
CAAATAGCTGAGAAATTGGA+AGG 0.565570 3_4:-48785383 Msa0504400:CDS
ACAAATTCCTTCATTGTGTG+TGG 0.567848 3_4:-48786099 Msa0504400:CDS
TCATAAGATTCAGATATAAG+TGG 0.570449 3_4:+48783575 None:intergenic
CTCAGAGGGGAAGAGAGAGA+TGG 0.571224 3_4:-48783228 Msa0504400:CDS
AATCTATCAATGGCAGTCAA+AGG 0.571369 3_4:+48786317 None:intergenic
TTTGGTTTAGGGTAATTGGA+AGG 0.578739 3_4:+48783389 None:intergenic
TCAGTTATTGGCAAATGAAG+AGG 0.583601 3_4:-48786138 Msa0504400:CDS
TAGTTTGGGAAGAATAGTAA+GGG 0.586373 3_4:+48783465 None:intergenic
GTCCTCAGAGATCGCTGACA+CGG 0.599223 3_4:+48783658 None:intergenic
AGTAGTAGCAGTAGTACCGG+TGG 0.600003 3_4:+48783703 None:intergenic
AGTGGACTGATGAAGAAGAC+AGG 0.601588 3_4:-48785983 Msa0504400:intron
AGGACCAATAGAAGAGTGGT+TGG 0.605891 3_4:+48786340 None:intergenic
ACGGAGCTAGTAGTAGCAGC+AGG 0.605975 3_4:+48783677 None:intergenic
TTTCCTTGATCAAAGGACAG+TGG 0.611527 3_4:-48786001 Msa0504400:CDS
TCTTTGCTATCTCCGCCCAA+CGG 0.615526 3_4:+48783888 None:intergenic
AAAAGGCCTCAAACCACTGA+TGG 0.628725 3_4:-48783785 Msa0504400:CDS
AAGGTAATTCATCATAGGTG+AGG 0.637959 3_4:+48783334 None:intergenic
CATGATTGGAAACCGTTGGG+CGG 0.641685 3_4:-48783900 Msa0504400:CDS
GCCATTGATAGATTCTTATG+GGG 0.643647 3_4:-48786308 Msa0504400:CDS
ATCCACAATCAGTAACATCA+GGG 0.650690 3_4:+48783426 None:intergenic
CTATCAATGGCAGTCAAAGG+AGG 0.652795 3_4:+48786320 None:intergenic
AAAGATGGCATAATCATCTG+AGG 0.662817 3_4:-48785337 Msa0504400:CDS
CTCCGTGTCAGCGATCTCTG+AGG 0.667016 3_4:-48783660 Msa0504400:CDS
AAGGAGGACCAATAGAAGAG+TGG 0.673968 3_4:+48786336 None:intergenic
TGGCAATATGAATTTCTCAG+AGG 0.674443 3_4:-48783243 Msa0504400:CDS
AGGATGCTAGTAGAAACTCA+TGG 0.688422 3_4:-48783923 Msa0504400:CDS
GCAATATGAATTTCTCAGAG+GGG 0.702999 3_4:-48783241 Msa0504400:CDS
ATTGGAGTACGTATTGGTGG+TGG 0.703614 3_4:-48786380 Msa0504400:CDS
AATTCAGAATCAGAACAATG+TGG 0.714283 3_4:-48783276 Msa0504400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAATAATATATATT+TGG - chr3_4:48783939-48783958 Msa0504400:CDS 0.0%
!!! TATTTTTAATAATATATATT+TGG - chr3_4:48783970-48783989 Msa0504400:intron 0.0%
!!! TTTTTATGATATTATATACT+TGG - chr3_4:48783781-48783800 Msa0504400:CDS 10.0%
!!! GTCTTTTAATAATATATATT+TGG - chr3_4:48784080-48784099 Msa0504400:intron 10.0%
!! AAATATATTGAAAAAATTGA+AGG + chr3_4:48784298-48784317 None:intergenic 10.0%
!!! AAAATATAACTAAATTTTCT+AGG + chr3_4:48784771-48784790 None:intergenic 10.0%
!!! AAAATTTTTTAATTGTCTTT+TGG - chr3_4:48785214-48785233 Msa0504400:intron 10.0%
!! GACATCATATTATTATTATT+AGG + chr3_4:48783400-48783419 None:intergenic 15.0%
!!! TATATTTGGACTAAATTTTA+AGG - chr3_4:48783984-48784003 Msa0504400:intron 15.0%
!!! AAATCATAGATAAATTTTCA+AGG + chr3_4:48784441-48784460 None:intergenic 15.0%
!!! ATATTTATCTTTTAAACTCT+TGG - chr3_4:48784865-48784884 Msa0504400:intron 15.0%
!!! TATTTATCTTTTAAACTCTT+GGG - chr3_4:48784866-48784885 Msa0504400:intron 15.0%
!!! TAAATATAAAGAGTATACTA+AGG + chr3_4:48785450-48785469 None:intergenic 15.0%
!! TTTATATTTACTTATCGATA+TGG - chr3_4:48785460-48785479 Msa0504400:intron 15.0%
!! GATCAAAATATTTATAGCTT+TGG - chr3_4:48783340-48783359 Msa0504400:CDS 20.0%
!!! GGTCTTGTTATATAAAAAAA+TGG - chr3_4:48784005-48784024 Msa0504400:intron 20.0%
!!! TATATTTGGGCTAAATTTTA+AGG - chr3_4:48784094-48784113 Msa0504400:intron 20.0%
!!! TTGTTGTTATCTAAAATCAA+AGG - chr3_4:48784128-48784147 Msa0504400:intron 20.0%
!!! TGTTCTATATTTTTTTTGAG+AGG + chr3_4:48784387-48784406 None:intergenic 20.0%
!! ATTCATGTGAATGATAAATT+TGG + chr3_4:48784596-48784615 None:intergenic 20.0%
!! TTTGTTGAAGTTTCTTTTGA+GGG + chr3_4:48783312-48783331 None:intergenic 25.0%
!! TTTTGTTGAAGTTTCTTTTG+AGG + chr3_4:48783313-48783332 None:intergenic 25.0%
! AAACACTCAAACAACAATTA+GGG + chr3_4:48783635-48783654 None:intergenic 25.0%
!!! TTTGATAATGCATGTAAATG+CGG - chr3_4:48783707-48783726 Msa0504400:CDS 25.0%
! TATACTTGGACTAAATTTGA+AGG - chr3_4:48783795-48783814 Msa0504400:CDS 25.0%
!!! TTTGAAGGTGTTTTGTTATT+TGG - chr3_4:48783810-48783829 Msa0504400:CDS 25.0%
!!! TTGGTGTTACTTTTAAACAA+AGG - chr3_4:48783829-48783848 Msa0504400:CDS 25.0%
!!! GCATCTAATTTGATTTTTCT+AGG - chr3_4:48784803-48784822 Msa0504400:intron 25.0%
!!! ATTTTTCTAGGATCTATCTT+TGG - chr3_4:48784815-48784834 Msa0504400:intron 25.0%
! GTCAAAGATTAATACATACA+AGG - chr3_4:48784904-48784923 Msa0504400:intron 25.0%
! ATGCAAGTCAATGATAAATT+TGG + chr3_4:48784947-48784966 None:intergenic 25.0%
! ATGACAATAAATCCAAACTA+GGG + chr3_4:48785036-48785055 None:intergenic 25.0%
! TATGACAATAAATCCAAACT+AGG + chr3_4:48785037-48785056 None:intergenic 25.0%
! ATACTTATGAGAAATATGGA+GGG + chr3_4:48785124-48785143 None:intergenic 25.0%
! GAAACTTGGAAAAAAAAGTA+CGG + chr3_4:48785518-48785537 None:intergenic 25.0%
!!! CTTTTTTTTCCAAGTTTCTT+CGG - chr3_4:48785520-48785539 Msa0504400:intron 25.0%
! GTAAGTCTAATGTTAGTAAA+TGG - chr3_4:48785542-48785561 Msa0504400:intron 25.0%
! AGAATGCAATAAAGAATCAT+TGG - chr3_4:48785732-48785751 Msa0504400:intron 25.0%
! TAGAAAAAACAAAGGAAGAT+TGG + chr3_4:48785958-48785977 None:intergenic 25.0%
! TCATAAGATTCAGATATAAG+TGG + chr3_4:48786007-48786026 None:intergenic 25.0%
!! AATCTGATTACTGTTAGTTT+GGG + chr3_4:48786131-48786150 None:intergenic 25.0%
!!! TGTTTTGTGAATTTGGTTTA+GGG + chr3_4:48786204-48786223 None:intergenic 25.0%
!!! TTGTTTTGTGAATTTGGTTT+AGG + chr3_4:48786205-48786224 None:intergenic 25.0%
!!! TACATGTTGTTTTGTGAATT+TGG + chr3_4:48786211-48786230 None:intergenic 25.0%
! GAATTAAGGTAATTCATCAT+AGG + chr3_4:48786253-48786272 None:intergenic 25.0%
TGCCATTGATAGATTCTTAT+GGG - chr3_4:48783270-48783289 Msa0504400:CDS 30.0%
!!! CTTCAACCTATAGTTTTATG+TGG - chr3_4:48783374-48783393 Msa0504400:CDS 30.0%
ATTAGGCCACATAAAACTAT+AGG + chr3_4:48783383-48783402 None:intergenic 30.0%
!! TAGCTTTGTTGATCAGTTAT+TGG - chr3_4:48783429-48783448 Msa0504400:CDS 30.0%
GAAAAAGAAGACACTTTCTT+AGG + chr3_4:48783562-48783581 None:intergenic 30.0%
! TCTTCTTTTTCCTTGATCAA+AGG - chr3_4:48783571-48783590 Msa0504400:CDS 30.0%
CAAACACTCAAACAACAATT+AGG + chr3_4:48783636-48783655 None:intergenic 30.0%
!! TAGCATATGGTTCTAAATTG+CGG - chr3_4:48783660-48783679 Msa0504400:CDS 30.0%
AGCAATATGGTGTAAGAAAA+TGG - chr3_4:48784170-48784189 Msa0504400:intron 30.0%
AAGTGACATACTTTGATATC+AGG + chr3_4:48784268-48784287 None:intergenic 30.0%
TCTATATCTTATGAACTTGC+AGG - chr3_4:48784553-48784572 Msa0504400:intron 30.0%
ATTAATCCAAACGTGGATTT+AGG + chr3_4:48784679-48784698 None:intergenic 30.0%
TAAGACAATTAATCCAAACG+TGG + chr3_4:48784686-48784705 None:intergenic 30.0%
TATCCTACTTATGAGAAAAG+TGG + chr3_4:48784742-48784761 None:intergenic 30.0%
AAACCTTGTCAAGGTTATTT+GGG + chr3_4:48785101-48785120 None:intergenic 30.0%
CATACTTATGAGAAATATGG+AGG + chr3_4:48785125-48785144 None:intergenic 30.0%
CTCCATATTTCTCATAAGTA+TGG - chr3_4:48785123-48785142 Msa0504400:intron 30.0%
CACCATACTTATGAGAAATA+TGG + chr3_4:48785128-48785147 None:intergenic 30.0%
!! ACTATATGAAAGTGCTAGAT+TGG - chr3_4:48785288-48785307 Msa0504400:intron 30.0%
TCATTCCATGTTTAGATTCA+CGG - chr3_4:48785391-48785410 Msa0504400:CDS 30.0%
TGCAACATGTAAAGTAAGTT+CGG + chr3_4:48785608-48785627 None:intergenic 30.0%
ATCATTGGAATGCAACAAAA+AGG - chr3_4:48785747-48785766 Msa0504400:intron 30.0%
CAAAAAGGAGACAAAATTCA+AGG - chr3_4:48785762-48785781 Msa0504400:intron 30.0%
ATTCAAGGAGAAAGAACAAA+AGG - chr3_4:48785777-48785796 Msa0504400:intron 30.0%
TCTTGAAGAATAGAAGATTG+TGG + chr3_4:48785824-48785843 None:intergenic 30.0%
GGATAGGTTAGAAAAAACAA+AGG + chr3_4:48785966-48785985 None:intergenic 30.0%
! ATGATGAATTTTCATGGGAT+AGG + chr3_4:48785982-48786001 None:intergenic 30.0%
!! TGGTGATGATGAATTTTCAT+GGG + chr3_4:48785987-48786006 None:intergenic 30.0%
TAGTTTGGGAAGAATAGTAA+GGG + chr3_4:48786117-48786136 None:intergenic 30.0%
! TTAGTTTGGGAAGAATAGTA+AGG + chr3_4:48786118-48786137 None:intergenic 30.0%
GAATCTGATTACTGTTAGTT+TGG + chr3_4:48786132-48786151 None:intergenic 30.0%
! TGAATTTGGTTTAGGGTAAT+TGG + chr3_4:48786197-48786216 None:intergenic 30.0%
AATTCAGAATCAGAACAATG+TGG - chr3_4:48786303-48786322 Msa0504400:CDS 30.0%
AAACCAATTGGAGTACGTAT+TGG - chr3_4:48783193-48783212 Msa0504400:CDS 35.0%
AATCTATCAATGGCAGTCAA+AGG + chr3_4:48783265-48783284 None:intergenic 35.0%
CTGCCATTGATAGATTCTTA+TGG - chr3_4:48783269-48783288 Msa0504400:CDS 35.0%
GCCATTGATAGATTCTTATG+GGG - chr3_4:48783271-48783290 Msa0504400:CDS 35.0%
ACCCCATAAGAATCTATCAA+TGG + chr3_4:48783275-48783294 None:intergenic 35.0%
TCAGTTATTGGCAAATGAAG+AGG - chr3_4:48783441-48783460 Msa0504400:CDS 35.0%
CAAATGAAGAGGTGATGAAT+TGG - chr3_4:48783452-48783471 Msa0504400:CDS 35.0%
ACAAATTCCTTCATTGTGTG+TGG - chr3_4:48783480-48783499 Msa0504400:CDS 35.0%
GAGTGTTTGTTTGTAGCATA+TGG - chr3_4:48783647-48783666 Msa0504400:CDS 35.0%
TCAAAGGAAATTGCTGAAGT+TGG - chr3_4:48784144-48784163 Msa0504400:intron 35.0%
GTCTCAAATAGCTGAGAAAT+TGG - chr3_4:48784192-48784211 Msa0504400:intron 35.0%
CAAATAGCTGAGAAATTGGA+AGG - chr3_4:48784196-48784215 Msa0504400:intron 35.0%
AAAGATGGCATAATCATCTG+AGG - chr3_4:48784242-48784261 Msa0504400:intron 35.0%
CTACTTATGAGAAAAGTGGA+GGG + chr3_4:48784738-48784757 None:intergenic 35.0%
GGAGAAATGAGAGAAATTGT+GGG + chr3_4:48785009-48785028 None:intergenic 35.0%
AGGAGAAATGAGAGAAATTG+TGG + chr3_4:48785010-48785029 None:intergenic 35.0%
ATAAATCCAAACTAGGGTTC+AGG + chr3_4:48785030-48785049 None:intergenic 35.0%
!!! AAGGTTATTTGGGTTTTGGA+GGG + chr3_4:48785091-48785110 None:intergenic 35.0%
!! TGTCAAGGTTATTTGGGTTT+TGG + chr3_4:48785095-48785114 None:intergenic 35.0%
AAACCCAAATAACCTTGACA+AGG - chr3_4:48785095-48785114 Msa0504400:intron 35.0%
GAAACCTTGTCAAGGTTATT+TGG + chr3_4:48785102-48785121 None:intergenic 35.0%
ATGACTAAATCACACCAACA+AGG - chr3_4:48785156-48785175 Msa0504400:intron 35.0%
!! TGAAAGTGCTAGATTGGAAA+TGG - chr3_4:48785294-48785313 Msa0504400:intron 35.0%
ATTCACCGTGAATCTAAACA+TGG + chr3_4:48785399-48785418 None:intergenic 35.0%
TTAGACTTACCGAAGAAACT+TGG + chr3_4:48785532-48785551 None:intergenic 35.0%
ACATGTTGCAGAAAGATAGT+TGG - chr3_4:48785618-48785637 Msa0504400:intron 35.0%
!! AGGAAGATTGGTTTGAAGAA+GGG + chr3_4:48785946-48785965 None:intergenic 35.0%
!! AAGGAAGATTGGTTTGAAGA+AGG + chr3_4:48785947-48785966 None:intergenic 35.0%
!! GTGGTGATGATGAATTTTCA+TGG + chr3_4:48785988-48786007 None:intergenic 35.0%
TGAAAAGTTGTTGCATGAAG+AGG + chr3_4:48786039-48786058 None:intergenic 35.0%
! CTTCATGCAACAACTTTTCA+AGG - chr3_4:48786039-48786058 Msa0504400:CDS 35.0%
GAATAGTAAGGGTTTGAAGA+GGG + chr3_4:48786106-48786125 None:intergenic 35.0%
AGAATAGTAAGGGTTTGAAG+AGG + chr3_4:48786107-48786126 None:intergenic 35.0%
ATCCACAATCAGTAACATCA+GGG + chr3_4:48786156-48786175 None:intergenic 35.0%
AATCCACAATCAGTAACATC+AGG + chr3_4:48786157-48786176 None:intergenic 35.0%
! TTTAGGGTAATTGGAAGGAT+TGG + chr3_4:48786188-48786207 None:intergenic 35.0%
! TTTGGTTTAGGGTAATTGGA+AGG + chr3_4:48786193-48786212 None:intergenic 35.0%
AAGGTAATTCATCATAGGTG+AGG + chr3_4:48786248-48786267 None:intergenic 35.0%
GAAGGTAGTGATCAGAATTA+AGG + chr3_4:48786267-48786286 None:intergenic 35.0%
TTCTGAATTCCATTCAGCAT+TGG + chr3_4:48786292-48786311 None:intergenic 35.0%
TGGCAATATGAATTTCTCAG+AGG - chr3_4:48786336-48786355 Msa0504400:CDS 35.0%
GGCAATATGAATTTCTCAGA+GGG - chr3_4:48786337-48786356 Msa0504400:CDS 35.0%
GCAATATGAATTTCTCAGAG+GGG - chr3_4:48786338-48786357 Msa0504400:CDS 35.0%
ATCACCAACCACTCTTCTAT+TGG - chr3_4:48783235-48783254 Msa0504400:CDS 40.0%
!! GAAGTTTCTTTTGAGGGAAG+TGG + chr3_4:48783306-48783325 None:intergenic 40.0%
TCTTTCTCCACACACAATGA+AGG + chr3_4:48783490-48783509 None:intergenic 40.0%
GAGAAAGAAGATGCGATCAA+TGG - chr3_4:48783502-48783521 Msa0504400:CDS 40.0%
GAAGATGCGATCAATGGTTT+AGG - chr3_4:48783508-48783527 Msa0504400:CDS 40.0%
TGCGATCAATGGTTTAGGAA+AGG - chr3_4:48783513-48783532 Msa0504400:CDS 40.0%
GCGATCAATGGTTTAGGAAA+GGG - chr3_4:48783514-48783533 Msa0504400:CDS 40.0%
! TTTAGGAAAGGGTGCAAAAG+TGG - chr3_4:48783525-48783544 Msa0504400:CDS 40.0%
TTTCCTTGATCAAAGGACAG+TGG - chr3_4:48783578-48783597 Msa0504400:CDS 40.0%
! GTTCTAAATTGCAGCCGAAT+CGG + chr3_4:48783733-48783752 None:intergenic 40.0%
!! CTGAAGTTGGTGAAGCAATA+TGG - chr3_4:48784157-48784176 Msa0504400:intron 40.0%
GGAATGTGAGAAAATGTTGG+AGG + chr3_4:48784655-48784674 None:intergenic 40.0%
GGAGGAATGTGAGAAAATGT+TGG + chr3_4:48784658-48784677 None:intergenic 40.0%
ATTCCTCCTAAATCCACGTT+TGG - chr3_4:48784670-48784689 Msa0504400:intron 40.0%
AATCCAAACGTGGATTTAGG+AGG + chr3_4:48784676-48784695 None:intergenic 40.0%
GAAACCTTGTCAGGGTTATT+TGG + chr3_4:48784716-48784735 None:intergenic 40.0%
CCTACTTATGAGAAAAGTGG+AGG + chr3_4:48784739-48784758 None:intergenic 40.0%
!! CCTCCACTTTTCTCATAAGT+AGG - chr3_4:48784736-48784755 Msa0504400:intron 40.0%
GAAATGAGAGAAATTGTGGG+AGG + chr3_4:48785006-48785025 None:intergenic 40.0%
ATTTCTCCTGAACCCTAGTT+TGG - chr3_4:48785021-48785040 Msa0504400:intron 40.0%
!! CAAGGTTATTTGGGTTTTGG+AGG + chr3_4:48785092-48785111 None:intergenic 40.0%
TGAGTATTTGCACACCTTGT+TGG + chr3_4:48785173-48785192 None:intergenic 40.0%
GTAAGTTCGGAGTCATAAAG+TGG + chr3_4:48785595-48785614 None:intergenic 40.0%
GTTGGAGTGAAGAAGAAGAA+AGG - chr3_4:48785636-48785655 Msa0504400:intron 40.0%
AGGATGCTAGTAGAAACTCA+TGG - chr3_4:48785656-48785675 Msa0504400:intron 40.0%
GTAGAAACTCATGGCATGAT+TGG - chr3_4:48785665-48785684 Msa0504400:intron 40.0%
GAGATAGCAAAGAGAATTCC+AGG - chr3_4:48785701-48785720 Msa0504400:intron 40.0%
ATTGCATTCTCAGTTCTTCC+TGG + chr3_4:48785722-48785741 None:intergenic 40.0%
AGATTGTGGTTTACCATCAG+TGG + chr3_4:48785810-48785829 None:intergenic 40.0%
!! ACTACTCAAAAAGCATCCAC+CGG - chr3_4:48785860-48785879 Msa0504400:intron 40.0%
AGTAGTAGTAGCAGTAGTAC+CGG + chr3_4:48785882-48785901 None:intergenic 40.0%
! TGAATTCCATTCAGCATTGG+AGG + chr3_4:48786289-48786308 None:intergenic 40.0%
AACAATGTGGAGTTGCATCT+TGG - chr3_4:48786316-48786335 Msa0504400:CDS 40.0%
! GAAGAGAGAGATGGATTTGT+TGG - chr3_4:48786360-48786379 Msa0504400:CDS 40.0%
!! AGAGATGGATTTGTTGGAGT+TGG - chr3_4:48786366-48786385 Msa0504400:CDS 40.0%
CCACCAATACGTACTCCAAT+TGG + chr3_4:48783199-48783218 None:intergenic 45.0%
CCAATTGGAGTACGTATTGG+TGG - chr3_4:48783196-48783215 Msa0504400:CDS 45.0%
! ATTGGAGTACGTATTGGTGG+TGG - chr3_4:48783199-48783218 Msa0504400:CDS 45.0%
AGGACCAATAGAAGAGTGGT+TGG + chr3_4:48783242-48783261 None:intergenic 45.0%
AAGGAGGACCAATAGAAGAG+TGG + chr3_4:48783246-48783265 None:intergenic 45.0%
CTATCAATGGCAGTCAAAGG+AGG + chr3_4:48783262-48783281 None:intergenic 45.0%
AGTCCACTGTCCTTTGATCA+AGG + chr3_4:48783584-48783603 None:intergenic 45.0%
!! AGTGGACTGATGAAGAAGAC+AGG - chr3_4:48783596-48783615 Msa0504400:CDS 45.0%
GAGAAATTGGAAGGAAGAGC+TGG - chr3_4:48784205-48784224 Msa0504400:intron 45.0%
AAGAGCTGGAAAGCAGTGTA+GGG - chr3_4:48784219-48784238 Msa0504400:intron 45.0%
GAAAGCAGTGTAGGGAAAGA+TGG - chr3_4:48784227-48784246 Msa0504400:intron 45.0%
CCTTGTCAGGGTTATTTGGA+GGG + chr3_4:48784712-48784731 None:intergenic 45.0%
ACCTTGTCAGGGTTATTTGG+AGG + chr3_4:48784713-48784732 None:intergenic 45.0%
TATGGAGGGAAACCTTGTCA+AGG + chr3_4:48785110-48785129 None:intergenic 45.0%
ATGGCATGATTGGAAACCGT+TGG - chr3_4:48785675-48785694 Msa0504400:intron 45.0%
TGGCATGATTGGAAACCGTT+GGG - chr3_4:48785676-48785695 Msa0504400:intron 45.0%
AAAAGGCCTCAAACCACTGA+TGG - chr3_4:48785794-48785813 Msa0504400:intron 45.0%
GGTTTACCATCAGTGGTTTG+AGG + chr3_4:48785803-48785822 None:intergenic 45.0%
TTCTTGGAGTAGGGGTTAAC+AGG + chr3_4:48786082-48786101 None:intergenic 45.0%
AAGAGGGTTTCTTGGAGTAG+GGG + chr3_4:48786090-48786109 None:intergenic 45.0%
GAAGAGGGTTTCTTGGAGTA+GGG + chr3_4:48786091-48786110 None:intergenic 45.0%
TGAAGAGGGTTTCTTGGAGT+AGG + chr3_4:48786092-48786111 None:intergenic 45.0%
AGGGTTTGAAGAGGGTTTCT+TGG + chr3_4:48786098-48786117 None:intergenic 45.0%
! CTCCCTGATGTTACTGATTG+TGG - chr3_4:48786151-48786170 Msa0504400:CDS 45.0%
TACCTTCCTCCAATGCTGAA+TGG - chr3_4:48786280-48786299 Msa0504400:CDS 45.0%
! TTCCATTCAGCATTGGAGGA+AGG + chr3_4:48786285-48786304 None:intergenic 45.0%
!!! TCTTTTAATAATATATATTT+GGG - chr3_4:48784081-48784100 Msa0504400:intron 5.0%
! GGAAAGGGTGCAAAAGTGGT+TGG - chr3_4:48783529-48783548 Msa0504400:CDS 50.0%
GCATGTAAATGCGGCCGATT+CGG - chr3_4:48783716-48783735 Msa0504400:CDS 50.0%
GAAGAGCTGGAAAGCAGTGT+AGG - chr3_4:48784218-48784237 Msa0504400:intron 50.0%
CCCTCCAAATAACCCTGACA+AGG - chr3_4:48784709-48784728 Msa0504400:intron 50.0%
AGTGGAGGGAAACCTTGTCA+GGG + chr3_4:48784724-48784743 None:intergenic 50.0%
AAGTGGAGGGAAACCTTGTC+AGG + chr3_4:48784725-48784744 None:intergenic 50.0%
TCTATCTTTGGCATCTGCGC+AGG - chr3_4:48784827-48784846 Msa0504400:intron 50.0%
CATGATTGGAAACCGTTGGG+CGG - chr3_4:48785679-48785698 Msa0504400:intron 50.0%
! TCTTTGCTATCTCCGCCCAA+CGG + chr3_4:48785694-48785713 None:intergenic 50.0%
! AGTAGTAGCAGTAGTACCGG+TGG + chr3_4:48785879-48785898 None:intergenic 50.0%
GGAGTAGGGGTTAACAGGTT+CGG + chr3_4:48786077-48786096 None:intergenic 50.0%
ACGGAGCTAGTAGTAGCAGC+AGG + chr3_4:48785905-48785924 None:intergenic 55.0%
GTCCTCAGAGATCGCTGACA+CGG + chr3_4:48785924-48785943 None:intergenic 55.0%
CTCAGAGGGGAAGAGAGAGA+TGG - chr3_4:48786351-48786370 Msa0504400:CDS 55.0%
CTCCGTGTCAGCGATCTCTG+AGG - chr3_4:48785919-48785938 Msa0504400:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 48783190 48786411 48783190 ID=Msa0504400;Name=Msa0504400
chr3_4 mRNA 48783190 48786411 48783190 ID=Msa0504400-mRNA-1;Parent=Msa0504400;Name=Msa0504400-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|445
chr3_4 exon 48785984 48786411 48785984 ID=Msa0504400-mRNA-1:exon:10502;Parent=Msa0504400-mRNA-1
chr3_4 exon 48785325 48785451 48785325 ID=Msa0504400-mRNA-1:exon:10501;Parent=Msa0504400-mRNA-1
chr3_4 exon 48783190 48783972 48783190 ID=Msa0504400-mRNA-1:exon:10500;Parent=Msa0504400-mRNA-1
chr3_4 CDS 48785984 48786411 48785984 ID=Msa0504400-mRNA-1:cds;Parent=Msa0504400-mRNA-1
chr3_4 CDS 48785325 48785451 48785325 ID=Msa0504400-mRNA-1:cds;Parent=Msa0504400-mRNA-1
chr3_4 CDS 48783190 48783972 48783190 ID=Msa0504400-mRNA-1:cds;Parent=Msa0504400-mRNA-1
Gene Sequence

>Msa0504400

ATGAAACCAATTGGAGTACGTATTGGTGGTGGTGATAATTTAAAGATCACCAACCACTCTTCTATTGGTCCTCCTTTGACTGCCATTGATAGATTCTTATGGGGTCAACACAACCACTTCCCTCAAAAGAAACTTCAACAAAATGTTGATGATCAAAATATTTATAGCTTTGGTTGTTCGAATGCTTCAACCTATAGTTTTATGTGGCCTAATAATAATAATATGATGTCTCAAGAAGCTAGCTTTGTTGATCAGTTATTGGCAAATGAAGAGGTGATGAATTGGACACAACAAATTCCTTCATTGTGTGTGGAGAAAGAAGATGCGATCAATGGTTTAGGAAAGGGTGCAAAAGTGGTTGGAAGAAGACCTAAGAAAGTGTCTTCTTTTTCCTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGAAATTGCTGAAGTTGGTGAAGCAATATGGTGTAAGAAAATGGTCTCAAATAGCTGAGAAATTGGAAGGAAGAGCTGGAAAGCAGTGTAGGGAAAGATGGCATAATCATCTGAGGCCTGATATCAAAAAAGATAGTTGGAGTGAAGAAGAAGAAAGGATGCTAGTAGAAACTCATGGCATGATTGGAAACCGTTGGGCGGAGATAGCAAAGAGAATTCCAGGAAGAACTGAGAATGCAATAAAGAATCATTGGAATGCAACAAAAAGGAGACAAAATTCAAGGAGAAAGAACAAAAGGCCTCAAACCACTGATGGTAAACCACAATCTTCTATTCTTCAAGACTACATCAAAACTTTGACTACTCAAAAAGCATCCACCGGTACTACTGCTACTACTACTCCTGCTGCTACTACTAGCTCCGTGTCAGCGATCTCTGAGGACCCTTCTTCAAACCAATCTTCCTTTGTTTTTTCTAACCTATCCCATGAAAATTCATCATCACCACTTATATCTGAATCTTATGATGATGAACTCCTCTTCATGCAACAACTTTTCAAGGTGAATAATAACGCCGAACCTGTTAACCCCTACTCCAAGAAACCCTCTTCAAACCCTTACTATTCTTCCCAAACTAACAGTAATCAGATTCTCCCTGATGTTACTGATTGTGGATTTGTTCATTCCAATCCTTCCAATTACCCTAAACCAAATTCACAAAACAACATGTACTTGAGTACTTCTTCCTCACCTATGATGAATTACCTTAATTCTGATCACTACCTTCCTCCAATGCTGAATGGAATTCAGAATCAGAACAATGTGGAGTTGCATCTTGGCAATATGAATTTCTCAGAGGGGAAGAGAGAGATGGATTTGTTGGAGTTGGTTTCTTCTGCTCAGTTTTATTAG
Protein sequence

>Msa0504400

MKPIGVRIGGGDNLKITNHSSIGPPLTAIDRFLWGQHNHFPQKKLQQNVDDQNIYSFGCSNASTYSFMWPNNNNMMSQEASFVDQLLANEEVMNWTQQIPSLCVEKEDAINGLGKGAKVVGRRPKKVSSFSLIKGQWTDEEDRKLLKLVKQYGVRKWSQIAEKLEGRAGKQCRERWHNHLRPDIKKDSWSEEEERMLVETHGMIGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSRRKNKRPQTTDGKPQSSILQDYIKTLTTQKASTGTTATTTPAATTSSVSAISEDPSSNQSSFVFSNLSHENSSSPLISESYDDELLFMQQLFKVNNNAEPVNPYSKKPSSNPYYSSQTNSNQILPDVTDCGFVHSNPSNYPKPNSQNNMYLSTSSSPMMNYLNSDHYLPPMLNGIQNQNNVELHLGNMNFSEGKREMDLLELVSSAQFY*