Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506200 | XP_013445020.1 | 39.370 | 127 | 74 | 2 | 182 | 305 | 31 | 157 | 1.19e-12 | 78.2 |
| Msa0506200 | XP_013445020.1 | 43.568 | 241 | 82 | 3 | 6 | 192 | 1 | 241 | 1.35e-55 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506200 | sp|Q9FJK3|AGL80_ARATH | 41.463 | 123 | 72 | 0 | 183 | 305 | 32 | 154 | 2.23e-22 | 98.6 |
| Msa0506200 | sp|Q9FJK3|AGL80_ARATH | 63.158 | 76 | 28 | 0 | 6 | 81 | 1 | 76 | 1.15e-21 | 96.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506200 | A0A072TZT1 | 39.370 | 127 | 74 | 2 | 182 | 305 | 31 | 157 | 5.70e-13 | 78.2 |
| Msa0506200 | A0A072TZT1 | 43.568 | 241 | 82 | 3 | 6 | 192 | 1 | 241 | 6.47e-56 | 191 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0506200 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506200 | MtrunA17_Chr8g0351751 | 43.568 | 241 | 82 | 3 | 6 | 192 | 1 | 241 | 1.25e-59 | 191 |
| Msa0506200 | MtrunA17_Chr8g0351751 | 39.370 | 127 | 74 | 2 | 182 | 305 | 31 | 157 | 1.10e-16 | 78.2 |
| Msa0506200 | MtrunA17_Chr4g0014321 | 42.982 | 228 | 75 | 3 | 6 | 184 | 1 | 222 | 2.92e-58 | 187 |
| Msa0506200 | MtrunA17_Chr4g0014321 | 37.097 | 124 | 77 | 1 | 182 | 304 | 31 | 154 | 7.20e-21 | 89.4 |
| Msa0506200 | MtrunA17_Chr2g0296861 | 67.188 | 128 | 42 | 0 | 182 | 309 | 31 | 158 | 1.94e-45 | 151 |
| Msa0506200 | MtrunA17_Chr2g0296861 | 44.872 | 78 | 43 | 0 | 6 | 83 | 1 | 78 | 3.39e-17 | 77.4 |
| Msa0506200 | MtrunA17_Chr4g0013041 | 40.284 | 211 | 54 | 4 | 6 | 167 | 1 | 188 | 4.75e-42 | 144 |
| Msa0506200 | MtrunA17_Chr4g0013041 | 34.921 | 126 | 81 | 1 | 180 | 304 | 27 | 152 | 7.46e-19 | 83.2 |
| Msa0506200 | MtrunA17_Chr4g0014031 | 41.558 | 231 | 72 | 6 | 6 | 184 | 1 | 220 | 5.34e-42 | 145 |
| Msa0506200 | MtrunA17_Chr4g0014031 | 41.129 | 124 | 72 | 1 | 183 | 305 | 32 | 155 | 3.60e-23 | 95.5 |
| Msa0506200 | MtrunA17_Chr4g0014131 | 42.128 | 235 | 67 | 8 | 6 | 184 | 1 | 222 | 3.60e-37 | 132 |
| Msa0506200 | MtrunA17_Chr4g0014131 | 38.636 | 132 | 80 | 1 | 183 | 313 | 32 | 163 | 1.37e-21 | 91.3 |
| Msa0506200 | MtrunA17_Chr3g0110131 | 40.870 | 230 | 85 | 4 | 6 | 184 | 1 | 230 | 2.03e-34 | 125 |
| Msa0506200 | MtrunA17_Chr3g0110131 | 43.089 | 123 | 70 | 0 | 183 | 305 | 32 | 154 | 9.13e-28 | 108 |
| Msa0506200 | MtrunA17_Chr3g0107461 | 47.328 | 131 | 68 | 1 | 182 | 311 | 31 | 161 | 1.62e-33 | 120 |
| Msa0506200 | MtrunA17_Chr3g0107461 | 46.591 | 88 | 45 | 1 | 6 | 91 | 1 | 88 | 7.96e-20 | 84.7 |
| Msa0506200 | MtrunA17_Chr3g0107381 | 45.385 | 130 | 71 | 0 | 182 | 311 | 31 | 160 | 2.22e-32 | 119 |
| Msa0506200 | MtrunA17_Chr3g0107381 | 60.526 | 76 | 30 | 0 | 6 | 81 | 1 | 76 | 7.76e-26 | 102 |
| Msa0506200 | MtrunA17_Chr3g0105791 | 46.212 | 132 | 70 | 1 | 182 | 312 | 3 | 134 | 1.54e-31 | 115 |
| Msa0506200 | MtrunA17_Chr4g0031421 | 45.113 | 133 | 72 | 1 | 182 | 313 | 3 | 135 | 1.56e-31 | 115 |
| Msa0506200 | MtrunA17_Chr4g0031421 | 50.000 | 60 | 28 | 1 | 34 | 91 | 1 | 60 | 2.12e-11 | 60.8 |
| Msa0506200 | MtrunA17_Chr3g0107331 | 59.459 | 74 | 30 | 0 | 8 | 81 | 2 | 75 | 4.04e-28 | 106 |
| Msa0506200 | MtrunA17_Chr3g0107331 | 38.525 | 122 | 75 | 0 | 182 | 303 | 30 | 151 | 1.24e-19 | 84.3 |
| Msa0506200 | MtrunA17_Chr3g0107351 | 58.108 | 74 | 31 | 0 | 8 | 81 | 2 | 75 | 4.81e-27 | 103 |
| Msa0506200 | MtrunA17_Chr3g0107351 | 31.967 | 122 | 83 | 0 | 183 | 304 | 31 | 152 | 2.63e-14 | 69.7 |
| Msa0506200 | MtrunA17_Chr3g0107341 | 59.459 | 74 | 30 | 0 | 8 | 81 | 2 | 75 | 8.30e-27 | 103 |
| Msa0506200 | MtrunA17_Chr3g0107341 | 33.051 | 118 | 79 | 0 | 183 | 300 | 31 | 148 | 9.85e-13 | 65.1 |
| Msa0506200 | MtrunA17_Chr2g0296831 | 67.105 | 76 | 25 | 0 | 6 | 81 | 1 | 76 | 9.03e-26 | 99.4 |
| Msa0506200 | MtrunA17_Chr2g0296831 | 37.500 | 88 | 55 | 0 | 183 | 270 | 32 | 119 | 2.37e-15 | 71.2 |
| Msa0506200 | MtrunA17_Chr3g0107361 | 50.000 | 90 | 43 | 1 | 8 | 95 | 2 | 91 | 1.34e-25 | 100 |
| Msa0506200 | MtrunA17_Chr3g0107361 | 36.719 | 128 | 69 | 3 | 183 | 304 | 31 | 152 | 1.44e-14 | 70.5 |
| Msa0506200 | MtrunA17_Chr3g0106421 | 44.531 | 128 | 70 | 1 | 184 | 310 | 5 | 132 | 1.67e-25 | 101 |
| Msa0506200 | MtrunA17_Chr2g0283941 | 44.853 | 136 | 68 | 3 | 182 | 312 | 31 | 164 | 1.68e-24 | 99.4 |
| Msa0506200 | MtrunA17_Chr2g0283941 | 55.263 | 76 | 34 | 0 | 6 | 81 | 1 | 76 | 7.46e-22 | 92.4 |
| Msa0506200 | MtrunA17_Chr4g0014121 | 44.099 | 161 | 41 | 3 | 1 | 112 | 24 | 184 | 3.11e-24 | 97.4 |
| Msa0506200 | MtrunA17_Chr4g0014121 | 40.323 | 124 | 73 | 1 | 183 | 305 | 60 | 183 | 1.85e-22 | 92.4 |
| Msa0506200 | MtrunA17_Chr1g0197261 | 52.055 | 73 | 35 | 0 | 6 | 78 | 1 | 73 | 3.68e-22 | 90.9 |
| Msa0506200 | MtrunA17_Chr1g0197261 | 30.159 | 126 | 87 | 1 | 182 | 307 | 31 | 155 | 3.91e-13 | 66.2 |
| Msa0506200 | MtrunA17_Chr1g0197461 | 55.696 | 79 | 32 | 1 | 8 | 83 | 2 | 80 | 4.67e-22 | 90.5 |
| Msa0506200 | MtrunA17_Chr1g0197461 | 28.906 | 128 | 90 | 1 | 182 | 309 | 30 | 156 | 1.04e-11 | 62.0 |
| Msa0506200 | MtrunA17_Chr5g0420351 | 62.712 | 59 | 22 | 0 | 6 | 64 | 1 | 59 | 2.65e-21 | 88.6 |
| Msa0506200 | MtrunA17_Chr5g0420351 | 29.365 | 126 | 88 | 1 | 182 | 307 | 31 | 155 | 1.41e-11 | 62.0 |
| Msa0506200 | MtrunA17_Chr5g0432691 | 33.333 | 123 | 82 | 0 | 182 | 304 | 31 | 153 | 2.83e-21 | 88.6 |
| Msa0506200 | MtrunA17_Chr5g0432691 | 42.991 | 107 | 55 | 2 | 6 | 111 | 1 | 102 | 2.86e-21 | 88.6 |
| Msa0506200 | MtrunA17_Chr1g0188681 | 61.667 | 60 | 23 | 0 | 6 | 65 | 1 | 60 | 4.55e-21 | 87.8 |
| Msa0506200 | MtrunA17_Chr1g0188681 | 28.800 | 125 | 88 | 1 | 180 | 304 | 29 | 152 | 1.54e-11 | 61.6 |
| Msa0506200 | MtrunA17_Chr1g0197321 | 52.778 | 72 | 34 | 0 | 6 | 77 | 1 | 72 | 5.36e-21 | 87.8 |
| Msa0506200 | MtrunA17_Chr3g0106501 | 39.394 | 132 | 77 | 2 | 183 | 311 | 4 | 135 | 3.47e-19 | 82.8 |
| Msa0506200 | MtrunA17_Chr1g0188661 | 31.148 | 122 | 83 | 1 | 183 | 304 | 32 | 152 | 1.84e-16 | 75.5 |
| Msa0506200 | MtrunA17_Chr1g0188661 | 51.389 | 72 | 35 | 0 | 6 | 77 | 1 | 72 | 2.87e-15 | 72.0 |
| Msa0506200 | MtrunA17_Chr4g0012761 | 33.607 | 122 | 80 | 1 | 183 | 304 | 32 | 152 | 2.42e-16 | 75.1 |
| Msa0506200 | MtrunA17_Chr4g0012761 | 46.250 | 80 | 43 | 0 | 6 | 85 | 1 | 80 | 3.27e-16 | 74.7 |
| Msa0506200 | MtrunA17_Chr7g0218151 | 32.787 | 122 | 81 | 1 | 183 | 304 | 32 | 152 | 3.24e-16 | 74.7 |
| Msa0506200 | MtrunA17_Chr7g0218151 | 50.000 | 72 | 36 | 0 | 6 | 77 | 1 | 72 | 8.10e-16 | 73.6 |
| Msa0506200 | MtrunA17_Chr1g0193311 | 51.389 | 72 | 35 | 0 | 6 | 77 | 1 | 72 | 3.25e-15 | 72.0 |
| Msa0506200 | MtrunA17_Chr1g0193311 | 31.707 | 123 | 83 | 1 | 183 | 305 | 32 | 153 | 2.34e-14 | 69.7 |
| Msa0506200 | MtrunA17_Chr7g0267601 | 33.645 | 107 | 59 | 2 | 8 | 112 | 6 | 102 | 1.77e-14 | 73.9 |
| Msa0506200 | MtrunA17_Chr1g0188651 | 51.389 | 72 | 35 | 0 | 6 | 77 | 1 | 72 | 6.04e-14 | 68.6 |
| Msa0506200 | MtrunA17_Chr4g0008701 | 32.710 | 107 | 60 | 2 | 8 | 112 | 6 | 102 | 2.41e-13 | 70.5 |
| Msa0506200 | MtrunA17_Chr3g0128721 | 35.616 | 73 | 47 | 0 | 8 | 80 | 6 | 78 | 1.71e-12 | 67.8 |
| Msa0506200 | MtrunA17_Chr6g0457851 | 37.805 | 82 | 45 | 3 | 1 | 76 | 6 | 87 | 8.97e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506200 | AT3G05860.2 | 51.724 | 87 | 40 | 1 | 6 | 90 | 1 | 87 | 2.40e-25 | 101 |
| Msa0506200 | AT3G05860.2 | 35.294 | 119 | 77 | 0 | 182 | 300 | 31 | 149 | 1.28e-16 | 77.4 |
| Msa0506200 | AT3G05860.3 | 51.724 | 87 | 40 | 1 | 6 | 90 | 1 | 87 | 5.96e-25 | 101 |
| Msa0506200 | AT3G05860.3 | 35.294 | 119 | 77 | 0 | 182 | 300 | 31 | 149 | 1.61e-16 | 78.2 |
| Msa0506200 | AT3G05860.1 | 51.724 | 87 | 40 | 1 | 6 | 90 | 1 | 87 | 9.34e-25 | 100 |
| Msa0506200 | AT3G05860.1 | 35.294 | 119 | 77 | 0 | 182 | 300 | 31 | 149 | 1.51e-16 | 78.2 |
| Msa0506200 | AT5G48670.1 | 41.463 | 123 | 72 | 0 | 183 | 305 | 32 | 154 | 2.27e-23 | 98.6 |
| Msa0506200 | AT5G48670.1 | 63.158 | 76 | 28 | 0 | 6 | 81 | 1 | 76 | 1.17e-22 | 96.3 |
| Msa0506200 | AT5G27810.1 | 44.186 | 86 | 48 | 0 | 183 | 268 | 4 | 89 | 2.55e-19 | 82.4 |
| Msa0506200 | AT5G27810.1 | 56.250 | 48 | 21 | 0 | 34 | 81 | 1 | 48 | 3.62e-14 | 68.6 |
| Msa0506200 | AT5G27960.1 | 54.167 | 72 | 33 | 0 | 9 | 80 | 2 | 73 | 3.11e-19 | 87.0 |
| Msa0506200 | AT5G26650.1 | 54.167 | 72 | 33 | 0 | 9 | 80 | 2 | 73 | 8.63e-19 | 86.3 |
| Msa0506200 | AT1G65330.1 | 59.420 | 69 | 28 | 0 | 8 | 76 | 2 | 70 | 1.64e-18 | 84.3 |
| Msa0506200 | AT1G65330.1 | 35.606 | 132 | 83 | 2 | 182 | 312 | 30 | 160 | 1.34e-17 | 81.6 |
| Msa0506200 | AT2G28700.1 | 43.210 | 81 | 46 | 0 | 6 | 86 | 1 | 81 | 1.73e-18 | 84.7 |
| Msa0506200 | AT1G65300.1 | 53.623 | 69 | 32 | 0 | 8 | 76 | 2 | 70 | 2.34e-18 | 83.6 |
| Msa0506200 | AT1G65300.1 | 31.746 | 126 | 86 | 0 | 182 | 307 | 30 | 155 | 1.32e-14 | 73.2 |
| Msa0506200 | AT1G22590.2 | 45.333 | 75 | 41 | 0 | 6 | 80 | 1 | 75 | 3.30e-17 | 78.2 |
| Msa0506200 | AT1G31630.1 | 40.000 | 105 | 58 | 2 | 8 | 112 | 2 | 101 | 6.29e-17 | 80.5 |
| Msa0506200 | AT1G31630.1 | 28.571 | 126 | 83 | 2 | 182 | 304 | 30 | 151 | 1.21e-11 | 65.1 |
| Msa0506200 | AT5G26580.1 | 50.704 | 71 | 34 | 1 | 6 | 75 | 1 | 71 | 1.36e-15 | 76.6 |
| Msa0506200 | AT5G55690.1 | 45.570 | 79 | 36 | 2 | 6 | 77 | 1 | 79 | 3.91e-14 | 71.6 |
| Msa0506200 | AT5G55690.2 | 45.570 | 79 | 36 | 2 | 6 | 77 | 1 | 79 | 3.91e-14 | 71.6 |
| Msa0506200 | AT1G31640.1 | 46.575 | 73 | 38 | 1 | 8 | 80 | 2 | 73 | 6.71e-14 | 72.4 |
| Msa0506200 | AT1G31640.1 | 31.250 | 128 | 83 | 2 | 182 | 307 | 30 | 154 | 1.44e-13 | 71.2 |
| Msa0506200 | AT5G58890.1 | 52.308 | 65 | 25 | 1 | 6 | 64 | 1 | 65 | 2.70e-13 | 69.7 |
| Msa0506200 | AT2G40210.1 | 44.737 | 76 | 42 | 0 | 6 | 81 | 1 | 76 | 4.04e-13 | 69.7 |
| Msa0506200 | AT5G26630.1 | 41.818 | 110 | 53 | 3 | 6 | 113 | 1 | 101 | 9.02e-13 | 67.0 |
| Msa0506200 | AT5G26630.1 | 27.344 | 128 | 93 | 0 | 185 | 312 | 34 | 161 | 1.11e-11 | 63.9 |
Find 81 sgRNAs with CRISPR-Local
Find 537 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCATCTGGACTTCTTCTT+TGG | 0.146388 | 3_4:+52408502 | None:intergenic |
| CAAGCATGCGCTGTAATTTA+TGG | 0.162014 | 3_4:-52413440 | Msa0506200:CDS |
| ATCATTCATTTCATTCTTCT+TGG | 0.187611 | 3_4:+52408358 | None:intergenic |
| ATAATGTCAGCATTATTTAT+AGG | 0.257317 | 3_4:+52412975 | None:intergenic |
| CTCCATTTCAATCTTCATCT+TGG | 0.285395 | 3_4:+52408207 | None:intergenic |
| GGAAAACAACGTATAATAAA+AGG | 0.303343 | 3_4:-52413514 | Msa0506200:CDS |
| TTCTTTGTTCGACTTCCTTA+AGG | 0.340784 | 3_4:+52408246 | None:intergenic |
| TTTGTTTCTTTAACTTCTCT+AGG | 0.340953 | 3_4:+52408390 | None:intergenic |
| TACCAAGGTCCTTCAATTTG+TGG | 0.355617 | 3_4:+52413132 | None:intergenic |
| ATTCATTCATACGGGTGAAT+TGG | 0.359950 | 3_4:-52408324 | Msa0506200:CDS |
| TCCATTTCAATCTTCATCTT+GGG | 0.367020 | 3_4:+52408208 | None:intergenic |
| CATTGTCATTTCCTCATTCG+TGG | 0.373285 | 3_4:+52413022 | None:intergenic |
| GTGGTTGATTTGAATTATCT+TGG | 0.384051 | 3_4:-52413167 | Msa0506200:intron |
| GTGGATGGTGGCGGCGGCAG+TGG | 0.384809 | 3_4:+52413041 | None:intergenic |
| AACCTCAGGTTGAGGTTCAT+AGG | 0.395757 | 3_4:+52413415 | None:intergenic |
| TGAACTTGTCCAACACCATC+TGG | 0.408010 | 3_4:+52408489 | None:intergenic |
| AATTGAAGGACCTTGGTAGA+AGG | 0.412835 | 3_4:-52413127 | Msa0506200:CDS |
| ATCTGGACTTCTTCTTTGGA+TGG | 0.436613 | 3_4:+52408506 | None:intergenic |
| ATGAACCTCAACCTGAGGTT+TGG | 0.442477 | 3_4:-52413412 | Msa0506200:CDS |
| TTGGTAGAAGGTTGGAATCA+TGG | 0.444725 | 3_4:-52413115 | Msa0506200:CDS |
| ACCTCAGGTTGAGGTTCATA+GGG | 0.446591 | 3_4:+52413416 | None:intergenic |
| AAGTCAAGACCAACTACAAT+TGG | 0.453077 | 3_4:-52413066 | Msa0506200:CDS |
| TTGTTTCTTTAACTTCTCTA+GGG | 0.453550 | 3_4:+52408391 | None:intergenic |
| TAAACTTGTGAACAACGATA+TGG | 0.454024 | 3_4:-52413192 | Msa0506200:CDS |
| TAATGCTGACATTATTGAAA+GGG | 0.458402 | 3_4:-52412967 | Msa0506200:CDS |
| TTTATGAACTTGATGATGAA+TGG | 0.460764 | 3_4:-52412939 | Msa0506200:CDS |
| AATTTGTCAATTCATTCATA+CGG | 0.461709 | 3_4:-52408333 | Msa0506200:CDS |
| GGGGACAATACCATACCATT+TGG | 0.471412 | 3_4:-52412912 | Msa0506200:CDS |
| GCTTATTGTTGAGAACCTTA+AGG | 0.479647 | 3_4:-52408261 | Msa0506200:CDS |
| CATGGTGATGGCCAAACCTC+AGG | 0.485308 | 3_4:+52413401 | None:intergenic |
| CTTTATTCTAGTCAGAATCA+TGG | 0.489311 | 3_4:-52413582 | Msa0506200:intron |
| ACATACATCAATTCCACATA+AGG | 0.491397 | 3_4:+52408571 | None:intergenic |
| GTCATTTCCTCATTCGTGGA+TGG | 0.494180 | 3_4:+52413026 | None:intergenic |
| GTTGATAGACCACAAATTGA+AGG | 0.494814 | 3_4:-52413141 | Msa0506200:intron |
| AATGAAATCAGCACCTTATG+TGG | 0.499973 | 3_4:-52408584 | Msa0506200:CDS |
| TCCTCATTCGTGGATGGTGG+CGG | 0.500131 | 3_4:+52413032 | None:intergenic |
| TGGTAGAAGGTTGGAATCAT+GGG | 0.503221 | 3_4:-52413114 | Msa0506200:CDS |
| ATTTGTCAATTCATTCATAC+GGG | 0.508251 | 3_4:-52408332 | Msa0506200:CDS |
| AGCAGCATCATTCACAATGA+AGG | 0.512306 | 3_4:+52413538 | None:intergenic |
| TATGAAATAAGCACACTTTG+CGG | 0.513972 | 3_4:-52413467 | Msa0506200:CDS |
| CCAGGATCGACCTCACCAAA+TGG | 0.517194 | 3_4:+52412897 | None:intergenic |
| ATTCATACGGGTGAATTGGA+TGG | 0.523018 | 3_4:-52408320 | Msa0506200:CDS |
| TCATTCGTGGATGGTGGCGG+CGG | 0.526809 | 3_4:+52413035 | None:intergenic |
| GAAGGACCTTGGTAGAAGGT+TGG | 0.528423 | 3_4:-52413123 | Msa0506200:CDS |
| TGATGAATCATGGCCATGTT+GGG | 0.528819 | 3_4:-52413001 | Msa0506200:CDS |
| GCCGCCACCATCCACGAATG+AGG | 0.548147 | 3_4:-52413033 | Msa0506200:CDS |
| AAAATCGATGGTGGATCATG+AGG | 0.552677 | 3_4:-52408441 | Msa0506200:CDS |
| AACTTGATGATGAATGGTGA+TGG | 0.556175 | 3_4:-52412933 | Msa0506200:CDS |
| ATCGACCTCACCAAATGGTA+TGG | 0.558202 | 3_4:+52412902 | None:intergenic |
| AGAGACTTTCATGAGCCAAA+GGG | 0.559426 | 3_4:-52413306 | Msa0506200:intron |
| ATTTCCTCATTCGTGGATGG+TGG | 0.560117 | 3_4:+52413029 | None:intergenic |
| ATAATGCTGACATTATTGAA+AGG | 0.562300 | 3_4:-52412968 | Msa0506200:CDS |
| ATCACCATGTGAAGTCGAAA+GGG | 0.562914 | 3_4:-52413387 | Msa0506200:CDS |
| GCAGTGGAACCAATTGTAGT+TGG | 0.563775 | 3_4:+52413057 | None:intergenic |
| GACCACAAATTGAAGGACCT+TGG | 0.566187 | 3_4:-52413134 | Msa0506200:CDS |
| TATTTATAGGCAACCCAACA+TGG | 0.573445 | 3_4:+52412988 | None:intergenic |
| CTTTCGACTTCACATGGTGA+TGG | 0.579657 | 3_4:+52413389 | None:intergenic |
| GAAATGACAATGATGAATCA+TGG | 0.579997 | 3_4:-52413011 | Msa0506200:CDS |
| CATCACCATGTGAAGTCGAA+AGG | 0.582343 | 3_4:-52413388 | Msa0506200:CDS |
| GGTGAATTGGATGGAAATGT+TGG | 0.586534 | 3_4:-52408311 | Msa0506200:CDS |
| AAGTCGAACAAAGAATCGAA+TGG | 0.588974 | 3_4:-52408238 | Msa0506200:CDS |
| AGCACCCTTTCGACTTCACA+TGG | 0.589309 | 3_4:+52413383 | None:intergenic |
| AGAAGAAGTCCAGATGGTGT+TGG | 0.590630 | 3_4:-52408498 | Msa0506200:CDS |
| ATGATTCCAACCTTCTACCA+AGG | 0.601006 | 3_4:+52413117 | None:intergenic |
| ATTTGAACAAAGAAAATCGA+TGG | 0.602892 | 3_4:-52408453 | Msa0506200:CDS |
| ATGATGAATCATGGCCATGT+TGG | 0.605921 | 3_4:-52413002 | Msa0506200:CDS |
| GATGGCCAAACCTCAGGTTG+AGG | 0.606351 | 3_4:+52413407 | None:intergenic |
| ACTTGATGATGAATGGTGAT+GGG | 0.613677 | 3_4:-52412932 | Msa0506200:CDS |
| AAATCGATGGTGGATCATGA+GGG | 0.613825 | 3_4:-52408440 | Msa0506200:CDS |
| TGTATGTGGTATAATCTATG+AGG | 0.618109 | 3_4:-52408555 | Msa0506200:CDS |
| TCATTGTGAATGATGCTGCT+AGG | 0.624411 | 3_4:-52413535 | Msa0506200:CDS |
| TGAACAAAGAAAATCGATGG+TGG | 0.625312 | 3_4:-52408450 | Msa0506200:CDS |
| ATCCAAAGAAGAAGTCCAGA+TGG | 0.628220 | 3_4:-52408504 | Msa0506200:CDS |
| GGAAAACAATGCTCAAGCAA+TGG | 0.639574 | 3_4:-52408534 | Msa0506200:CDS |
| CCCCTATGAACCTCAACCTG+AGG | 0.641725 | 3_4:-52413417 | Msa0506200:CDS |
| TTATGTGGAATTGATGTATG+TGG | 0.644295 | 3_4:-52408569 | Msa0506200:CDS |
| TGGATCATGAGGGCTTCTTG+AGG | 0.648158 | 3_4:-52408430 | Msa0506200:CDS |
| CAATACCATACCATTTGGTG+AGG | 0.674087 | 3_4:-52412907 | Msa0506200:intron |
| CTTGATGATGAATGGTGATG+GGG | 0.675689 | 3_4:-52412931 | Msa0506200:CDS |
| TGTGAACAACGATATGGCAG+TGG | 0.700922 | 3_4:-52413186 | Msa0506200:CDS |
| CCTCAGGTTGAGGTTCATAG+GGG | 0.720052 | 3_4:+52413417 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTATTATTTATTAAA+TGG | + | chr3_4:52409787-52409806 | None:intergenic | 0.0% |
| !!! | AATATTTTTAAGTAATGTTT+TGG | - | chr3_4:52409926-52409945 | Msa0506200:intron | 10.0% |
| !! | AAAAAATCTAATATAATAGA+AGG | + | chr3_4:52411043-52411062 | None:intergenic | 10.0% |
| !!! | GTTTGAAATTATTATTTTTT+TGG | + | chr3_4:52411146-52411165 | None:intergenic | 10.0% |
| !! | TCATCATAAATTTAAAAATT+TGG | + | chr3_4:52412302-52412321 | None:intergenic | 10.0% |
| !!! | TGATGATTTTTTTTTTTTTT+TGG | - | chr3_4:52412316-52412335 | Msa0506200:intron | 10.0% |
| !!! | GATGATTTTTTTTTTTTTTT+GGG | - | chr3_4:52412317-52412336 | Msa0506200:intron | 10.0% |
| !!! | AATATTTTTCACAAAATAAA+TGG | + | chr3_4:52412762-52412781 | None:intergenic | 10.0% |
| !!! | AATAAATTTTTTTATAAGCA+AGG | - | chr3_4:52413122-52413141 | Msa0506200:CDS | 10.0% |
| !!! | CAATGTTTATTTTATAAAAT+TGG | - | chr3_4:52414806-52414825 | Msa0506200:intron | 10.0% |
| !! | GAAAATATAATTAATTAAAG+TGG | - | chr3_4:52414829-52414848 | Msa0506200:intron | 10.0% |
| !!! | AAACTTTTTAATTTAATACT+CGG | - | chr3_4:52414939-52414958 | Msa0506200:intron | 10.0% |
| !!! | TAATAAGATAATAATTTTTC+GGG | - | chr3_4:52415043-52415062 | Msa0506200:intron | 10.0% |
| !!! | ATTAATTTATGATTTTTCTT+GGG | + | chr3_4:52415091-52415110 | None:intergenic | 10.0% |
| !!! | TATTAATTTATGATTTTTCT+TGG | + | chr3_4:52415092-52415111 | None:intergenic | 10.0% |
| !! | AAAATATGTTTATATAAATG+GGG | - | chr3_4:52415799-52415818 | Msa0506200:intron | 10.0% |
| !! | TTTGCATTAAATATTACTTA+CGG | - | chr3_4:52408594-52408613 | Msa0506200:intron | 15.0% |
| !!! | TATATTTAAGTTGTAAAGAT+TGG | - | chr3_4:52408920-52408939 | Msa0506200:intron | 15.0% |
| !!! | TTGCTATTTGTTTATTTTAA+TGG | - | chr3_4:52409817-52409836 | Msa0506200:intron | 15.0% |
| !!! | TTTTGTTGTATTTTTTATGT+GGG | + | chr3_4:52410425-52410444 | None:intergenic | 15.0% |
| !!! | TTTTTGTTGTATTTTTTATG+TGG | + | chr3_4:52410426-52410445 | None:intergenic | 15.0% |
| !!! | ACCTTCTATTATATTTTTTT+TGG | - | chr3_4:52411015-52411034 | Msa0506200:intron | 15.0% |
| !!! | CCTTCTATTATATTTTTTTT+GGG | - | chr3_4:52411016-52411035 | Msa0506200:intron | 15.0% |
| !!! | GATTTTTTTTTTAAAGAGTA+AGG | - | chr3_4:52411055-52411074 | Msa0506200:intron | 15.0% |
| !!! | TCAAATAGGTTTTTATTTTA+TGG | + | chr3_4:52411172-52411191 | None:intergenic | 15.0% |
| !! | AATAATTAAAATATAGTGAG+AGG | + | chr3_4:52411275-52411294 | None:intergenic | 15.0% |
| !!! | TATTTTGCCATATTTTATTA+AGG | - | chr3_4:52411304-52411323 | Msa0506200:intron | 15.0% |
| !!! | ATTTTGCCATATTTTATTAA+GGG | - | chr3_4:52411305-52411324 | Msa0506200:intron | 15.0% |
| !! | TGTAAAATATTGTACTTTAT+TGG | + | chr3_4:52411376-52411395 | None:intergenic | 15.0% |
| !!! | TATATTTTTTTACATAAAGC+CGG | + | chr3_4:52412488-52412507 | None:intergenic | 15.0% |
| !!! | ATTTTTTAGATATTGAAGTT+TGG | - | chr3_4:52412535-52412554 | Msa0506200:intron | 15.0% |
| !!! | AAAATGATGAAAACATTTTT+TGG | - | chr3_4:52412912-52412931 | Msa0506200:CDS | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+TGG | - | chr3_4:52414977-52414996 | Msa0506200:intron | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | + | chr3_4:52415015-52415034 | None:intergenic | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | - | chr3_4:52415377-52415396 | Msa0506200:intron | 15.0% |
| !! | TTCGTTAATATTGATATATT+AGG | + | chr3_4:52416046-52416065 | None:intergenic | 15.0% |
| !!! | AATTTGCTTCATAAAAATTA+AGG | + | chr3_4:52416352-52416371 | None:intergenic | 15.0% |
| !! | CGAATTTGAATTTATATGAA+AGG | + | chr3_4:52408699-52408718 | None:intergenic | 20.0% |
| !! | TGGAAAAAAATTCTTTACAT+TGG | + | chr3_4:52408812-52408831 | None:intergenic | 20.0% |
| !!! | AAAGATTTATTTCTTACACA+GGG | - | chr3_4:52409109-52409128 | Msa0506200:intron | 20.0% |
| !!! | AATTAATCATTTTCTCTTTG+TGG | - | chr3_4:52409178-52409197 | Msa0506200:intron | 20.0% |
| !! | ATCTTTATATTACTTCTTTG+TGG | - | chr3_4:52409287-52409306 | Msa0506200:intron | 20.0% |
| !!! | ACAACATTTTATTAATGTAC+TGG | + | chr3_4:52409608-52409627 | None:intergenic | 20.0% |
| !! | GTACATTAATAAAATGTTGT+AGG | - | chr3_4:52409608-52409627 | Msa0506200:intron | 20.0% |
| !! | TATAAGGGTTCAAAAATTAA+AGG | - | chr3_4:52410645-52410664 | Msa0506200:intron | 20.0% |
| !! | TTCAAAAATTAAAGGATAAG+TGG | - | chr3_4:52410653-52410672 | Msa0506200:intron | 20.0% |
| !!! | AGCAATTTTTTATTGGATAA+AGG | + | chr3_4:52410883-52410902 | None:intergenic | 20.0% |
| !!! | TCTTAACAGCAATTTTTTAT+TGG | + | chr3_4:52410890-52410909 | None:intergenic | 20.0% |
| !! | CCCAAAAAAAATATAATAGA+AGG | + | chr3_4:52411019-52411038 | None:intergenic | 20.0% |
| !! | ATAGATACTATATTTCTCTA+CGG | + | chr3_4:52411213-52411232 | None:intergenic | 20.0% |
| !! | ATAATGTCAGCATTATTTAT+AGG | + | chr3_4:52412164-52412183 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTGGGTGTA+TGG | - | chr3_4:52412324-52412343 | Msa0506200:intron | 20.0% |
| !!! | TTTTTTTTTTTTGGGTGTAT+GGG | - | chr3_4:52412325-52412344 | Msa0506200:intron | 20.0% |
| !!! | ATATTTTTTTACATAAAGCC+GGG | + | chr3_4:52412487-52412506 | None:intergenic | 20.0% |
| !!! | TAGAAAATTCGTTTTTACAA+GGG | + | chr3_4:52412719-52412738 | None:intergenic | 20.0% |
| !!! | ATAGAAAATTCGTTTTTACA+AGG | + | chr3_4:52412720-52412739 | None:intergenic | 20.0% |
| !!! | TGTAAAAACGAATTTTCTAT+TGG | - | chr3_4:52412720-52412739 | Msa0506200:intron | 20.0% |
| !! | TTCTATTGGATTGTTAATTA+AGG | - | chr3_4:52412734-52412753 | Msa0506200:intron | 20.0% |
| !! | AAAAAAGAACAACAAACTAA+GGG | - | chr3_4:52413309-52413328 | Msa0506200:intron | 20.0% |
| !!! | AATGAATGAATATTTTCGAT+GGG | + | chr3_4:52413410-52413429 | None:intergenic | 20.0% |
| !!! | CAATTTTTGTTTCTTGTTTT+TGG | - | chr3_4:52413500-52413519 | Msa0506200:CDS | 20.0% |
| !!! | AAGACTTTTTTATGAAGTTA+CGG | + | chr3_4:52414499-52414518 | None:intergenic | 20.0% |
| !! | TAACTTCATAAAAAAGTCTT+TGG | - | chr3_4:52414499-52414518 | Msa0506200:intron | 20.0% |
| !! | GTAACATTATCAATCAATAA+CGG | - | chr3_4:52414575-52414594 | Msa0506200:intron | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | + | chr3_4:52415404-52415423 | None:intergenic | 20.0% |
| !!! | TACAAAGAGTATTTATCAAA+AGG | - | chr3_4:52415477-52415496 | Msa0506200:intron | 20.0% |
| !!! | ACAAAGAGTATTTATCAAAA+GGG | - | chr3_4:52415478-52415497 | Msa0506200:intron | 20.0% |
| !!! | TATTACTTATTTTCTTGCAT+TGG | - | chr3_4:52415545-52415564 | Msa0506200:intron | 20.0% |
| !! | ATTTATGGAGTCATTTAAAA+TGG | + | chr3_4:52415571-52415590 | None:intergenic | 20.0% |
| !!! | TAAGTCTTATGAGTATAAAA+TGG | + | chr3_4:52415700-52415719 | None:intergenic | 20.0% |
| !!! | GACATATTTTAGATACAATT+AGG | + | chr3_4:52415734-52415753 | None:intergenic | 20.0% |
| !! | TTATTTATTCATTACCAAGA+GGG | + | chr3_4:52415776-52415795 | None:intergenic | 20.0% |
| !! | TTTATTTATTCATTACCAAG+AGG | + | chr3_4:52415777-52415796 | None:intergenic | 20.0% |
| !!! | TAAAATTTTGATACATTGAG+TGG | + | chr3_4:52415871-52415890 | None:intergenic | 20.0% |
| !!! | ACAAGAGAGAAATTTTAAAA+AGG | + | chr3_4:52416205-52416224 | None:intergenic | 20.0% |
| !! | ACTTTATACTATAAATGACA+TGG | + | chr3_4:52416469-52416488 | None:intergenic | 20.0% |
| !! | AATTTGTCAATTCATTCATA+CGG | - | chr3_4:52416803-52416822 | Msa0506200:intron | 20.0% |
| !! | TGATGAGATTAATAAGTTGA+AGG | - | chr3_4:52408221-52408240 | Msa0506200:CDS | 25.0% |
| ! | ATATGAGAGCAACAATATAT+AGG | - | chr3_4:52408751-52408770 | Msa0506200:intron | 25.0% |
| !! | CAAAGATTTATTTCTTACAC+AGG | - | chr3_4:52409108-52409127 | Msa0506200:intron | 25.0% |
| !! | GTATATGGTTTTTCTTTTTG+TGG | - | chr3_4:52409131-52409150 | Msa0506200:intron | 25.0% |
| ! | CCATGAAAATAATGTTCAAA+TGG | + | chr3_4:52409226-52409245 | None:intergenic | 25.0% |
| !! | CCATTTGAACATTATTTTCA+TGG | - | chr3_4:52409223-52409242 | Msa0506200:intron | 25.0% |
| ! | AGAAGTAATATAAAGATCAC+CGG | + | chr3_4:52409284-52409303 | None:intergenic | 25.0% |
| ! | CTTACACATAATTTCATTTG+AGG | - | chr3_4:52409400-52409419 | Msa0506200:intron | 25.0% |
| ! | ATAGTTGAGAAAGTTATTGA+AGG | + | chr3_4:52409999-52410018 | None:intergenic | 25.0% |
| ! | TCAACTATCTTAAAGAACTT+CGG | - | chr3_4:52410011-52410030 | Msa0506200:intron | 25.0% |
| ! | TTTATCGAAATCTACTAAAG+AGG | + | chr3_4:52410133-52410152 | None:intergenic | 25.0% |
| !! | AAAACATACTCTAAGAACAA+AGG | - | chr3_4:52410272-52410291 | Msa0506200:intron | 25.0% |
| ! | ATTTCTCATTCAGAACATTA+AGG | + | chr3_4:52410351-52410370 | None:intergenic | 25.0% |
| !!! | GATCTTTTTTCTCAGTATAA+GGG | - | chr3_4:52410630-52410649 | Msa0506200:intron | 25.0% |
| ! | AAGAAATTGAGACAATGAAT+TGG | + | chr3_4:52410952-52410971 | None:intergenic | 25.0% |
| ! | ATGCACATAGATATTCAAAT+AGG | + | chr3_4:52411186-52411205 | None:intergenic | 25.0% |
| ! | TATCAGTAAAATATAGTGAG+AGG | + | chr3_4:52411248-52411267 | None:intergenic | 25.0% |
| ! | GTGATTCCCTTAATAAAATA+TGG | + | chr3_4:52411314-52411333 | None:intergenic | 25.0% |
| !! | TTGATTTTACATATCATGCA+TGG | - | chr3_4:52411342-52411361 | Msa0506200:intron | 25.0% |
| !! | TATACTAGTTTCCTTATAGA+TGG | + | chr3_4:52411442-52411461 | None:intergenic | 25.0% |
| ! | GGAAAACAACGTATAATAAA+AGG | - | chr3_4:52411622-52411641 | Msa0506200:intron | 25.0% |
| ! | AGTTATACAAACCAAACAAA+TGG | - | chr3_4:52411800-52411819 | Msa0506200:intron | 25.0% |
| !! | TTGATTTGAATTATCTTGGT+TGG | - | chr3_4:52411973-52411992 | Msa0506200:intron | 25.0% |
| ! | ATAATGCTGACATTATTGAA+AGG | - | chr3_4:52412168-52412187 | Msa0506200:intron | 25.0% |
| ! | TAATGCTGACATTATTGAAA+GGG | - | chr3_4:52412169-52412188 | Msa0506200:intron | 25.0% |
| !!! | TTTATGAACTTGATGATGAA+TGG | - | chr3_4:52412197-52412216 | Msa0506200:intron | 25.0% |
| ! | TTTAGATATTGAAGTTTGGT+TGG | - | chr3_4:52412539-52412558 | Msa0506200:intron | 25.0% |
| ! | TTAGATATTGAAGTTTGGTT+GGG | - | chr3_4:52412540-52412559 | Msa0506200:intron | 25.0% |
| !! | ATGACATTACATTGATTGAT+TGG | - | chr3_4:52412631-52412650 | Msa0506200:intron | 25.0% |
| ! | TCTCACATCTTATTATTAAC+AGG | + | chr3_4:52412821-52412840 | None:intergenic | 25.0% |
| !!! | ATAACTCTTTTAGAGTTTAG+CGG | + | chr3_4:52413221-52413240 | None:intergenic | 25.0% |
| !! | AGAGAAAAGTATATAAAGAG+AGG | - | chr3_4:52413248-52413267 | Msa0506200:intron | 25.0% |
| !! | GAGAAAAGTATATAAAGAGA+GGG | - | chr3_4:52413249-52413268 | Msa0506200:intron | 25.0% |
| !! | AGAAAAGTATATAAAGAGAG+GGG | - | chr3_4:52413250-52413269 | Msa0506200:intron | 25.0% |
| ! | CAAAAAAGAACAACAAACTA+AGG | - | chr3_4:52413308-52413327 | Msa0506200:intron | 25.0% |
| ! | AAGAAATCAAAGTAAAGATC+CGG | - | chr3_4:52413369-52413388 | Msa0506200:CDS | 25.0% |
| !! | CAATGAATGAATATTTTCGA+TGG | + | chr3_4:52413411-52413430 | None:intergenic | 25.0% |
| ! | ATATTCATTCATTGAGCATT+TGG | - | chr3_4:52413417-52413436 | Msa0506200:CDS | 25.0% |
| ! | GATATTCAGAAGATAATTGA+TGG | + | chr3_4:52413917-52413936 | None:intergenic | 25.0% |
| !!! | TTGATAATGTTACTAAGAAC+AGG | + | chr3_4:52414568-52414587 | None:intergenic | 25.0% |
| !! | TGGAAATTTTTATGAACATG+TGG | + | chr3_4:52414730-52414749 | None:intergenic | 25.0% |
| !!! | TTTTAGAGCTATTCTTAATG+AGG | - | chr3_4:52414888-52414907 | Msa0506200:intron | 25.0% |
| !! | GGAGATCACTTTATAATTTT+CGG | - | chr3_4:52415064-52415083 | Msa0506200:intron | 25.0% |
| !!! | AACTAATTTGCCTTTTTGTT+TGG | - | chr3_4:52415284-52415303 | Msa0506200:intron | 25.0% |
| ! | ACTTTACATACCAAACAAAA+AGG | + | chr3_4:52415297-52415316 | None:intergenic | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | + | chr3_4:52415399-52415418 | None:intergenic | 25.0% |
| ! | AGTAATAAGTTCACAAAGAA+CGG | + | chr3_4:52415532-52415551 | None:intergenic | 25.0% |
| ! | CTTGACAACAAAAACATTTA+TGG | + | chr3_4:52415586-52415605 | None:intergenic | 25.0% |
| !!! | CTTTTTAAAGTGTAAAGAAG+TGG | - | chr3_4:52415641-52415660 | Msa0506200:intron | 25.0% |
| !!! | ATTTGAACCCTTACTTTTAT+TGG | - | chr3_4:52415674-52415693 | Msa0506200:intron | 25.0% |
| ! | AAAATGGCCAATAAAAGTAA+GGG | + | chr3_4:52415684-52415703 | None:intergenic | 25.0% |
| ! | TAAAATGGCCAATAAAAGTA+AGG | + | chr3_4:52415685-52415704 | None:intergenic | 25.0% |
| !! | TTAACGTCAGAGATTATTTT+GGG | + | chr3_4:52415922-52415941 | None:intergenic | 25.0% |
| !! | TTTAACGTCAGAGATTATTT+TGG | + | chr3_4:52415923-52415942 | None:intergenic | 25.0% |
| ! | AAGAGTTAATGTTAACATTC+AGG | + | chr3_4:52415952-52415971 | None:intergenic | 25.0% |
| ! | CTTGTATGACAATAAGTATA+TGG | - | chr3_4:52416016-52416035 | Msa0506200:intron | 25.0% |
| ! | TATGACAATAAGTATATGGA+GGG | - | chr3_4:52416020-52416039 | Msa0506200:intron | 25.0% |
| ! | TAGTCACAATAATCTCTTAA+TGG | + | chr3_4:52416098-52416117 | None:intergenic | 25.0% |
| ! | TGGTATACTATTTATATAGG+AGG | + | chr3_4:52416155-52416174 | None:intergenic | 25.0% |
| ! | CTCTGGTATACTATTTATAT+AGG | + | chr3_4:52416158-52416177 | None:intergenic | 25.0% |
| !! | GATTTTCTTTGTTCAAATTC+AGG | + | chr3_4:52416681-52416700 | None:intergenic | 25.0% |
| ! | ATTTGAACAAAGAAAATCGA+TGG | - | chr3_4:52416683-52416702 | Msa0506200:intron | 25.0% |
| !! | TTGTTTCTTTAACTTCTCTA+GGG | + | chr3_4:52416748-52416767 | None:intergenic | 25.0% |
| !! | TTTGTTTCTTTAACTTCTCT+AGG | + | chr3_4:52416749-52416768 | None:intergenic | 25.0% |
| ! | ATCATTCATTTCATTCTTCT+TGG | + | chr3_4:52416781-52416800 | None:intergenic | 25.0% |
| ! | ATTTGTCAATTCATTCATAC+GGG | - | chr3_4:52416804-52416823 | Msa0506200:intron | 25.0% |
| ! | ATCATTCATCTCAAAGTGTT+GGG | + | chr3_4:52408256-52408275 | None:intergenic | 30.0% |
| AATCATTCATCTCAAAGTGT+TGG | + | chr3_4:52408257-52408276 | None:intergenic | 30.0% | |
| !! | CACTTTGAGATGAATGATTT+AGG | - | chr3_4:52408258-52408277 | Msa0506200:CDS | 30.0% |
| CAATTTCAATCCCTAAGAAA+TGG | + | chr3_4:52408293-52408312 | None:intergenic | 30.0% | |
| TTCTCAAAACATGCATCATT+CGG | + | chr3_4:52408531-52408550 | None:intergenic | 30.0% | |
| TATGAAAGGATTTCAGTCAA+AGG | + | chr3_4:52408685-52408704 | None:intergenic | 30.0% | |
| TGGTACTTAGTATAGACATA+TGG | + | chr3_4:52408832-52408851 | None:intergenic | 30.0% | |
| CTCTATGTTATCTGTGATTA+AGG | - | chr3_4:52409051-52409070 | Msa0506200:intron | 30.0% | |
| TATTTCTTACACAGGGTATA+TGG | - | chr3_4:52409116-52409135 | Msa0506200:intron | 30.0% | |
| ! | TCTTTTTGTGGTTATCTAAG+TGG | - | chr3_4:52409143-52409162 | Msa0506200:intron | 30.0% |
| AATGTTCAAATGGATATCAG+CGG | + | chr3_4:52409216-52409235 | None:intergenic | 30.0% | |
| ATGACATATACATTTCTTGG+TGG | - | chr3_4:52409247-52409266 | Msa0506200:intron | 30.0% | |
| !! | CTGGTATTTTTACTTCTTTG+TGG | - | chr3_4:52409321-52409340 | Msa0506200:intron | 30.0% |
| GTTTCTTGTATGAACCAATT+TGG | - | chr3_4:52409569-52409588 | Msa0506200:intron | 30.0% | |
| TGTATGAACCAATTTGGATA+AGG | - | chr3_4:52409575-52409594 | Msa0506200:intron | 30.0% | |
| GTCAAATTCCTTATCCAAAT+TGG | + | chr3_4:52409586-52409605 | None:intergenic | 30.0% | |
| AAATGGATGAATTTCACATC+TGG | + | chr3_4:52409770-52409789 | None:intergenic | 30.0% | |
| ! | TTGTGTAACGTCTCAAATTT+TGG | + | chr3_4:52409953-52409972 | None:intergenic | 30.0% |
| TTGAGAAAGTTATTGAAGGA+AGG | + | chr3_4:52409995-52410014 | None:intergenic | 30.0% | |
| CAACTATCTTAAAGAACTTC+GGG | - | chr3_4:52410012-52410031 | Msa0506200:intron | 30.0% | |
| AACTATCTTAAAGAACTTCG+GGG | - | chr3_4:52410013-52410032 | Msa0506200:intron | 30.0% | |
| !! | AAGAAGTTGATAAATGGCAT+GGG | + | chr3_4:52410041-52410060 | None:intergenic | 30.0% |
| !! | AAAGAAGTTGATAAATGGCA+TGG | + | chr3_4:52410042-52410061 | None:intergenic | 30.0% |
| ATCATAAAACGCTAACCAAT+AGG | - | chr3_4:52410205-52410224 | Msa0506200:intron | 30.0% | |
| ATCAATAACTAAGCACCTAT+TGG | + | chr3_4:52410223-52410242 | None:intergenic | 30.0% | |
| AACATTAAGGTTGAAGAAGA+AGG | + | chr3_4:52410338-52410357 | None:intergenic | 30.0% | |
| GAGAAATTGTGCATATTTCT+AGG | - | chr3_4:52410364-52410383 | Msa0506200:intron | 30.0% | |
| !! | AAATTGTGCATATTTCTAGG+TGG | - | chr3_4:52410367-52410386 | Msa0506200:intron | 30.0% |
| !! | AATTGTGCATATTTCTAGGT+GGG | - | chr3_4:52410368-52410387 | Msa0506200:intron | 30.0% |
| ACTTTGGTCATTCTTTAGAT+GGG | + | chr3_4:52410509-52410528 | None:intergenic | 30.0% | |
| !!! | GGATCTTTTTTCTCAGTATA+AGG | - | chr3_4:52410629-52410648 | Msa0506200:intron | 30.0% |
| CACTCTTAGTCACAAAATAA+TGG | + | chr3_4:52410790-52410809 | None:intergenic | 30.0% | |
| !! | CATTATTTTGTGACTAAGAG+TGG | - | chr3_4:52410788-52410807 | Msa0506200:intron | 30.0% |
| AAAAAAACGACTCTTTCGTT+TGG | - | chr3_4:52410909-52410928 | Msa0506200:intron | 30.0% | |
| AAAAAACGACTCTTTCGTTT+GGG | - | chr3_4:52410910-52410929 | Msa0506200:intron | 30.0% | |
| ! | TTTTACATATCATGCATGGA+TGG | - | chr3_4:52411346-52411365 | Msa0506200:intron | 30.0% |
| GTTTCCTTATAGATGGTATT+AGG | + | chr3_4:52411435-52411454 | None:intergenic | 30.0% | |
| CATGATTCTGACTAGAATAA+AGG | + | chr3_4:52411556-52411575 | None:intergenic | 30.0% | |
| CTTTATTCTAGTCAGAATCA+TGG | - | chr3_4:52411554-52411573 | Msa0506200:intron | 30.0% | |
| TATGAAATAAGCACACTTTG+CGG | - | chr3_4:52411669-52411688 | Msa0506200:intron | 30.0% | |
| !! | TGTTTGGTTTGTATAACTTC+AGG | + | chr3_4:52411798-52411817 | None:intergenic | 30.0% |
| TTTGAAAGCGAAAGATAAAC+TGG | - | chr3_4:52411854-52411873 | Msa0506200:intron | 30.0% | |
| AAGATAAACTGGCGAAATTA+AGG | - | chr3_4:52411865-52411884 | Msa0506200:intron | 30.0% | |
| GAAATTAAGGAAGGACAATA+AGG | - | chr3_4:52411878-52411897 | Msa0506200:intron | 30.0% | |
| TAAACTTGTGAACAACGATA+TGG | - | chr3_4:52411944-52411963 | Msa0506200:intron | 30.0% | |
| !! | GTGGTTGATTTGAATTATCT+TGG | - | chr3_4:52411969-52411988 | Msa0506200:intron | 30.0% |
| GAAATGACAATGATGAATCA+TGG | - | chr3_4:52412125-52412144 | Msa0506200:intron | 30.0% | |
| TAAATTGAGATACACCTCAA+AGG | + | chr3_4:52412277-52412296 | None:intergenic | 30.0% | |
| TGATGACTTAAATCACACAT+AGG | + | chr3_4:52412383-52412402 | None:intergenic | 30.0% | |
| AACTTTCAATACATTTGCAG+TGG | - | chr3_4:52412456-52412475 | Msa0506200:intron | 30.0% | |
| ! | TTAAACAAGTTTTACCTACG+AGG | + | chr3_4:52412574-52412593 | None:intergenic | 30.0% |
| ! | TTACATTGATTGATTGGATG+AGG | - | chr3_4:52412637-52412656 | Msa0506200:intron | 30.0% |
| ! | TACATTGATTGATTGGATGA+GGG | - | chr3_4:52412638-52412657 | Msa0506200:intron | 30.0% |
| TATATGATAGGTGAACACAA+TGG | + | chr3_4:52412691-52412710 | None:intergenic | 30.0% | |
| ACAAGGGATTCATATATGAT+AGG | + | chr3_4:52412703-52412722 | None:intergenic | 30.0% | |
| ! | CTTTTATCTTTGTCTTCTGA+GGG | + | chr3_4:52413288-52413307 | None:intergenic | 30.0% |
| TGATTTCTTTCTTTCGTGAT+CGG | + | chr3_4:52413358-52413377 | None:intergenic | 30.0% | |
| TGTTAATATTCAGCGTGATA+TGG | + | chr3_4:52413592-52413611 | None:intergenic | 30.0% | |
| ! | ACATCATGTAATGGAGATTA+TGG | - | chr3_4:52413974-52413993 | Msa0506200:intron | 30.0% |
| ATTATGCAACGACATATGAA+AGG | - | chr3_4:52414018-52414037 | Msa0506200:intron | 30.0% | |
| TGTACATCTAAATTATCGAC+AGG | - | chr3_4:52414097-52414116 | Msa0506200:intron | 30.0% | |
| AAGACATATTGGATCATCTA+AGG | + | chr3_4:52414260-52414279 | None:intergenic | 30.0% | |
| GAATAATCCAGAAGACATAT+TGG | + | chr3_4:52414271-52414290 | None:intergenic | 30.0% | |
| ! | ACAATGTAACATCTTTTCGT+TGG | + | chr3_4:52414392-52414411 | None:intergenic | 30.0% |
| ! | TGCACTCATTGTAAAAGTAT+TGG | + | chr3_4:52414417-52414436 | None:intergenic | 30.0% |
| !!! | CTTTTTTATGAAGTTACGGT+GGG | + | chr3_4:52414495-52414514 | None:intergenic | 30.0% |
| !!! | ACTTTTTTATGAAGTTACGG+TGG | + | chr3_4:52414496-52414515 | None:intergenic | 30.0% |
| TTTAGAAATCCCAGCATAAT+TGG | + | chr3_4:52414643-52414662 | None:intergenic | 30.0% | |
| GTACAGTAAATGTAAACAAG+AGG | + | chr3_4:52415166-52415185 | None:intergenic | 30.0% | |
| ! | TTGTAGCGGAAAAGATAATT+TGG | - | chr3_4:52415449-52415468 | Msa0506200:intron | 30.0% |
| TGTCAATGTAAATTGCACTT+TGG | - | chr3_4:52415750-52415769 | Msa0506200:intron | 30.0% | |
| ! | AAATGGGGTAATAGTCATTT+TGG | - | chr3_4:52415814-52415833 | Msa0506200:intron | 30.0% |
| GTATGACAATAAGTATATGG+AGG | - | chr3_4:52416019-52416038 | Msa0506200:intron | 30.0% | |
| TCACAATAATCTCTTAATGG+TGG | + | chr3_4:52416095-52416114 | None:intergenic | 30.0% | |
| ! | ATAGGAGGTAATAGTCATTT+TGG | + | chr3_4:52416140-52416159 | None:intergenic | 30.0% |
| ACATTTGGAAAAAGGAAACA+AGG | - | chr3_4:52416309-52416328 | Msa0506200:intron | 30.0% | |
| CACACTGATGTTCATTATAA+TGG | + | chr3_4:52416392-52416411 | None:intergenic | 30.0% | |
| ! | TCAGTTTTACATTTCTCTGA+CGG | - | chr3_4:52416490-52416509 | Msa0506200:intron | 30.0% |
| ACATACATCAATTCCACATA+AGG | + | chr3_4:52416568-52416587 | None:intergenic | 30.0% | |
| TTATGTGGAATTGATGTATG+TGG | - | chr3_4:52416567-52416586 | Msa0506200:intron | 30.0% | |
| TGTATGTGGTATAATCTATG+AGG | - | chr3_4:52416581-52416600 | Msa0506200:intron | 30.0% | |
| ! | GAACTCTTTGCCATTTCTTA+GGG | - | chr3_4:52408280-52408299 | Msa0506200:CDS | 35.0% |
| GAGAGAGGATGTAACATATA+AGG | + | chr3_4:52408322-52408341 | None:intergenic | 35.0% | |
| CGCTTATACTAGATGTAACT+TGG | + | chr3_4:52408348-52408367 | None:intergenic | 35.0% | |
| !! | ATCTAGTATAAGCGCTGATT+AGG | - | chr3_4:52408354-52408373 | Msa0506200:CDS | 35.0% |
| TGATGCGATCAATGAAATGT+TGG | + | chr3_4:52408638-52408657 | None:intergenic | 35.0% | |
| ! | ATTGATCGCATCATTTTGTG+TGG | - | chr3_4:52408645-52408664 | Msa0506200:intron | 35.0% |
| CAAATTCGTATAGCACCAAA+AGG | - | chr3_4:52408711-52408730 | Msa0506200:intron | 35.0% | |
| !!! | GTTGATTCGATGTTTCCTTT+TGG | + | chr3_4:52408729-52408748 | None:intergenic | 35.0% |
| !!! | CATTGGACACTTTTTCTCTT+TGG | + | chr3_4:52408795-52408814 | None:intergenic | 35.0% |
| ACTACTTCATAACACAGTCT+TGG | + | chr3_4:52408852-52408871 | None:intergenic | 35.0% | |
| AAGACTGTGTTATGAAGTAG+TGG | - | chr3_4:52408851-52408870 | Msa0506200:intron | 35.0% | |
| CATATCATCATGTACACACA+TGG | + | chr3_4:52409029-52409048 | None:intergenic | 35.0% | |
| TTTGTGGTTATCTAAGTGGT+TGG | - | chr3_4:52409147-52409166 | Msa0506200:intron | 35.0% | |
| GGCATGACATATACATTTCT+TGG | - | chr3_4:52409244-52409263 | Msa0506200:intron | 35.0% | |
| AGTAAAAATACCAGCCACTT+AGG | + | chr3_4:52409315-52409334 | None:intergenic | 35.0% | |
| GTGGATGGTGATATTATACT+CGG | - | chr3_4:52409351-52409370 | Msa0506200:intron | 35.0% | |
| ACTCGGATCATGTAGTATTT+AGG | - | chr3_4:52409368-52409387 | Msa0506200:intron | 35.0% | |
| AAAGTTATTGAAGGAAGGAG+TGG | + | chr3_4:52409990-52410009 | None:intergenic | 35.0% | |
| !! | CCTGCAAAGAAGTTGATAAA+TGG | + | chr3_4:52410047-52410066 | None:intergenic | 35.0% |
| CCATTTATCAACTTCTTTGC+AGG | - | chr3_4:52410044-52410063 | Msa0506200:intron | 35.0% | |
| GTTGTTCGAGATTCACAATA+AGG | + | chr3_4:52410105-52410124 | None:intergenic | 35.0% | |
| ATCGAAATCTACTAAAGAGG+AGG | + | chr3_4:52410130-52410149 | None:intergenic | 35.0% | |
| !!! | GTATTTTTTATGTGGGTGTG+AGG | + | chr3_4:52410418-52410437 | None:intergenic | 35.0% |
| CACTTTGGTCATTCTTTAGA+TGG | + | chr3_4:52410510-52410529 | None:intergenic | 35.0% | |
| AATGACCAAAGTGAGTCAAA+TGG | - | chr3_4:52410517-52410536 | Msa0506200:intron | 35.0% | |
| ATGACCAAAGTGAGTCAAAT+GGG | - | chr3_4:52410518-52410537 | Msa0506200:intron | 35.0% | |
| TTGGAAGTTTGATTAGAGGA+GGG | - | chr3_4:52410565-52410584 | Msa0506200:intron | 35.0% | |
| CAAATGTTGGGGGTTATTAA+GGG | - | chr3_4:52410608-52410627 | Msa0506200:intron | 35.0% | |
| ! | ACTTATACTTTTCCGTGTTG+CGG | - | chr3_4:52410833-52410852 | Msa0506200:intron | 35.0% |
| CACACCTAATACCATCTATA+AGG | - | chr3_4:52411428-52411447 | Msa0506200:intron | 35.0% | |
| CAGAATCATGGCTAGAAAAA+AGG | - | chr3_4:52411566-52411585 | Msa0506200:intron | 35.0% | |
| !!! | AAAGGGTGCTCTCAAATTTT+AGG | - | chr3_4:52411766-52411785 | Msa0506200:intron | 35.0% |
| !!! | AAGGGTGCTCTCAAATTTTA+GGG | - | chr3_4:52411767-52411786 | Msa0506200:intron | 35.0% |
| !! | CTCTTGATTTGCCATTTGTT+TGG | + | chr3_4:52411814-52411833 | None:intergenic | 35.0% |
| TAAACTGGCGAAATTAAGGA+AGG | - | chr3_4:52411869-52411888 | Msa0506200:intron | 35.0% | |
| TTTGATCAATGTCTCTATGC+AGG | - | chr3_4:52411921-52411940 | Msa0506200:intron | 35.0% | |
| ! | GTTGATAGACCACAAATTGA+AGG | - | chr3_4:52411995-52412014 | Msa0506200:intron | 35.0% |
| AAGTCAAGACCAACTACAAT+TGG | - | chr3_4:52412070-52412089 | Msa0506200:intron | 35.0% | |
| TATTTATAGGCAACCCAACA+TGG | + | chr3_4:52412151-52412170 | None:intergenic | 35.0% | |
| !! | AACTTGATGATGAATGGTGA+TGG | - | chr3_4:52412203-52412222 | Msa0506200:intron | 35.0% |
| !! | ACTTGATGATGAATGGTGAT+GGG | - | chr3_4:52412204-52412223 | Msa0506200:intron | 35.0% |
| !!! | GAAGACATAGTGGTTTTGAT+GGG | - | chr3_4:52412347-52412366 | Msa0506200:intron | 35.0% |
| !!! | AAGACATAGTGGTTTTGATG+GGG | - | chr3_4:52412348-52412367 | Msa0506200:intron | 35.0% |
| GTGATTTAAGTCATCATGTG+TGG | - | chr3_4:52412387-52412406 | Msa0506200:intron | 35.0% | |
| ! | GCTTTTATCTTTGTCTTCTG+AGG | + | chr3_4:52413289-52413308 | None:intergenic | 35.0% |
| AAATCAAAGTAAAGATCCGG+CGG | - | chr3_4:52413372-52413391 | Msa0506200:CDS | 35.0% | |
| TTGAAGCTACAACAAGTCTT+GGG | + | chr3_4:52413483-52413502 | None:intergenic | 35.0% | |
| ATTGAAGCTACAACAAGTCT+TGG | + | chr3_4:52413484-52413503 | None:intergenic | 35.0% | |
| !!! | TTCTTGTTTTTGGTGAAGAC+CGG | - | chr3_4:52413510-52413529 | Msa0506200:CDS | 35.0% |
| !!! | GAGTCACAAAGTTTTAGAGT+CGG | + | chr3_4:52413855-52413874 | None:intergenic | 35.0% |
| TAAATTCAGAATCCAACGTG+AGG | - | chr3_4:52413942-52413961 | Msa0506200:intron | 35.0% | |
| ATCGGTTGAACATCATGTAA+TGG | - | chr3_4:52413965-52413984 | Msa0506200:intron | 35.0% | |
| TTATGGCCTCACTATTTCAT+CGG | - | chr3_4:52413991-52414010 | Msa0506200:intron | 35.0% | |
| ATGTTTCCGATGAAATAGTG+AGG | + | chr3_4:52414000-52414019 | None:intergenic | 35.0% | |
| TCAAACAACACCACATCATA+TGG | + | chr3_4:52414059-52414078 | None:intergenic | 35.0% | |
| TTTACCTCGACACTCTATTT+CGG | - | chr3_4:52414163-52414182 | Msa0506200:intron | 35.0% | |
| AGATGATCCAATATGTCTTC+TGG | - | chr3_4:52414261-52414280 | Msa0506200:intron | 35.0% | |
| AGTTGACAAAAGGAAGAAGT+CGG | + | chr3_4:52414334-52414353 | None:intergenic | 35.0% | |
| ! | TTGTGTTTGTGAGCTTGTTT+CGG | - | chr3_4:52414360-52414379 | Msa0506200:intron | 35.0% |
| TTACAATGAGTGCAAAAGTC+CGG | - | chr3_4:52414423-52414442 | Msa0506200:intron | 35.0% | |
| GTTACTAAGAACAGGTTGTT+TGG | + | chr3_4:52414560-52414579 | None:intergenic | 35.0% | |
| ! | AACTTTGTTTGAGATCGCAA+GGG | + | chr3_4:52414612-52414631 | None:intergenic | 35.0% |
| ! | GATGATAACGAATAAGGAGA+TGG | + | chr3_4:52414694-52414713 | None:intergenic | 35.0% |
| CATTATGAAGGTAGTAGAGT+TGG | + | chr3_4:52414750-52414769 | None:intergenic | 35.0% | |
| CAACTCTACTACCTTCATAA+TGG | - | chr3_4:52414748-52414767 | Msa0506200:intron | 35.0% | |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | + | chr3_4:52415005-52415024 | None:intergenic | 35.0% |
| CTAATTTATGTTGAGTCCCA+AGG | - | chr3_4:52415232-52415251 | Msa0506200:intron | 35.0% | |
| GTATACCAGAGTAAGAAGAA+AGG | - | chr3_4:52416167-52416186 | Msa0506200:intron | 35.0% | |
| GAAAGGCAACATTTGGAAAA+AGG | - | chr3_4:52416301-52416320 | Msa0506200:intron | 35.0% | |
| !! | CTCTTGCTATGTTTTCAAAC+AGG | - | chr3_4:52416513-52416532 | Msa0506200:intron | 35.0% |
| AATGAAATCAGCACCTTATG+TGG | - | chr3_4:52416552-52416571 | Msa0506200:intron | 35.0% | |
| TGAACAAAGAAAATCGATGG+TGG | - | chr3_4:52416686-52416705 | Msa0506200:intron | 35.0% | |
| ATTCATTCATACGGGTGAAT+TGG | - | chr3_4:52416812-52416831 | Msa0506200:intron | 35.0% | |
| GCTTATTGTTGAGAACCTTA+AGG | - | chr3_4:52416875-52416894 | Msa0506200:intron | 35.0% | |
| TTCTTTGTTCGACTTCCTTA+AGG | + | chr3_4:52416893-52416912 | None:intergenic | 35.0% | |
| AAGTCGAACAAAGAATCGAA+TGG | - | chr3_4:52416898-52416917 | Msa0506200:intron | 35.0% | |
| ! | GGAACTCTTTGCCATTTCTT+AGG | - | chr3_4:52408279-52408298 | Msa0506200:CDS | 40.0% |
| GATGTAACTTGGATTGAGAG+AGG | + | chr3_4:52408337-52408356 | None:intergenic | 40.0% | |
| ! | GGTTTTCATAAAACTCGCAG+CGG | + | chr3_4:52408510-52408529 | None:intergenic | 40.0% |
| ! | TCATTTTGTGTGGAGTCTTG+AGG | - | chr3_4:52408655-52408674 | Msa0506200:intron | 40.0% |
| CTCTTTGGCACAAAAGTTCT+TGG | + | chr3_4:52408780-52408799 | None:intergenic | 40.0% | |
| TCTCTTTGTGGTTGCATAAG+TGG | - | chr3_4:52409190-52409209 | Msa0506200:intron | 40.0% | |
| !! | ATTTCTTGGTGGTGCTTAAG+TGG | - | chr3_4:52409258-52409277 | Msa0506200:intron | 40.0% |
| ACTTCTTTGTGGTGTCTAAG+TGG | - | chr3_4:52409332-52409351 | Msa0506200:intron | 40.0% | |
| GATTCACAATAAGGTGGCAA+AGG | + | chr3_4:52410096-52410115 | None:intergenic | 40.0% | |
| GTTCGAGATTCACAATAAGG+TGG | + | chr3_4:52410102-52410121 | None:intergenic | 40.0% | |
| ACCTTTATTCGTTCGTCACA+GGG | + | chr3_4:52410183-52410202 | None:intergenic | 40.0% | |
| AACCTTTATTCGTTCGTCAC+AGG | + | chr3_4:52410184-52410203 | None:intergenic | 40.0% | |
| ! | TACTCTAAGAACAAAGGCAG+AGG | - | chr3_4:52410278-52410297 | Msa0506200:intron | 40.0% |
| !! | TGCATATTTCTAGGTGGGTT+TGG | - | chr3_4:52410373-52410392 | Msa0506200:intron | 40.0% |
| ! | TATTTTCTCGTAACAGCACG+TGG | - | chr3_4:52410450-52410469 | Msa0506200:intron | 40.0% |
| !! | GTCAGTGGGTTGATGATATA+TGG | - | chr3_4:52410540-52410559 | Msa0506200:intron | 40.0% |
| GTTGGAAGTTTGATTAGAGG+AGG | - | chr3_4:52410564-52410583 | Msa0506200:intron | 40.0% | |
| TGGAAGTTTGATTAGAGGAG+GGG | - | chr3_4:52410566-52410585 | Msa0506200:intron | 40.0% | |
| TGAAATGGAGGAGCAAATGT+TGG | - | chr3_4:52410595-52410614 | Msa0506200:intron | 40.0% | |
| GAAATGGAGGAGCAAATGTT+GGG | - | chr3_4:52410596-52410615 | Msa0506200:intron | 40.0% | |
| AAATGGAGGAGCAAATGTTG+GGG | - | chr3_4:52410597-52410616 | Msa0506200:intron | 40.0% | |
| GCAAATGTTGGGGGTTATTA+AGG | - | chr3_4:52410607-52410626 | Msa0506200:intron | 40.0% | |
| ACAGTATTTCATCCGCAACA+CGG | + | chr3_4:52410848-52410867 | None:intergenic | 40.0% | |
| GTGTATGACTAATATCCAGC+TGG | + | chr3_4:52411409-52411428 | None:intergenic | 40.0% | |
| AGCAGCATCATTCACAATGA+AGG | + | chr3_4:52411601-52411620 | None:intergenic | 40.0% | |
| TCATTGTGAATGATGCTGCT+AGG | - | chr3_4:52411601-52411620 | Msa0506200:intron | 40.0% | |
| CAAGCATGCGCTGTAATTTA+TGG | - | chr3_4:52411696-52411715 | Msa0506200:intron | 40.0% | |
| ATCACCATGTGAAGTCGAAA+GGG | - | chr3_4:52411749-52411768 | Msa0506200:intron | 40.0% | |
| AAGAGACTTTCATGAGCCAA+AGG | - | chr3_4:52411829-52411848 | Msa0506200:intron | 40.0% | |
| AGAGACTTTCATGAGCCAAA+GGG | - | chr3_4:52411830-52411849 | Msa0506200:intron | 40.0% | |
| CTTTCGCTTTCAAAACCCTT+TGG | + | chr3_4:52411848-52411867 | None:intergenic | 40.0% | |
| TACCAAGGTCCTTCAATTTG+TGG | + | chr3_4:52412007-52412026 | None:intergenic | 40.0% | |
| AATTGAAGGACCTTGGTAGA+AGG | - | chr3_4:52412009-52412028 | Msa0506200:intron | 40.0% | |
| ATGATTCCAACCTTCTACCA+AGG | + | chr3_4:52412022-52412041 | None:intergenic | 40.0% | |
| TTGGTAGAAGGTTGGAATCA+TGG | - | chr3_4:52412021-52412040 | Msa0506200:intron | 40.0% | |
| TGGTAGAAGGTTGGAATCAT+GGG | - | chr3_4:52412022-52412041 | Msa0506200:intron | 40.0% | |
| ! | CATTGTCATTTCCTCATTCG+TGG | + | chr3_4:52412117-52412136 | None:intergenic | 40.0% |
| ATGATGAATCATGGCCATGT+TGG | - | chr3_4:52412134-52412153 | Msa0506200:intron | 40.0% | |
| TGATGAATCATGGCCATGTT+GGG | - | chr3_4:52412135-52412154 | Msa0506200:intron | 40.0% | |
| !! | CTTGATGATGAATGGTGATG+GGG | - | chr3_4:52412205-52412224 | Msa0506200:intron | 40.0% |
| ! | CAATACCATACCATTTGGTG+AGG | - | chr3_4:52412229-52412248 | Msa0506200:intron | 40.0% |
| CAAAGGATATGCAAAACTCC+AGG | + | chr3_4:52412260-52412279 | None:intergenic | 40.0% | |
| ! | GGAGTTTTGCATATCCTTTG+AGG | - | chr3_4:52412260-52412279 | Msa0506200:intron | 40.0% |
| !!! | GGAAGACATAGTGGTTTTGA+TGG | - | chr3_4:52412346-52412365 | Msa0506200:intron | 40.0% |
| ACACACCCAATCAAACTCAA+CGG | - | chr3_4:52412662-52412681 | Msa0506200:intron | 40.0% | |
| GAGAAAAGACAAGCATCAAG+AGG | - | chr3_4:52413144-52413163 | Msa0506200:intron | 40.0% | |
| CCAATCTTATTGGGATGTCA+AGG | + | chr3_4:52413173-52413192 | None:intergenic | 40.0% | |
| CCTTGACATCCCAATAAGAT+TGG | - | chr3_4:52413170-52413189 | Msa0506200:CDS | 40.0% | |
| !!! | CTTTTAGAGTTTAGCGGCAT+AGG | + | chr3_4:52413215-52413234 | None:intergenic | 40.0% |
| !! | TCTTTGTCTTCTGAGGGTTT+TGG | + | chr3_4:52413282-52413301 | None:intergenic | 40.0% |
| CATTCATTGAGCATTTGGAG+AGG | - | chr3_4:52413422-52413441 | Msa0506200:CDS | 40.0% | |
| TTCAGCGTGATATGGAATTG+TGG | + | chr3_4:52413584-52413603 | None:intergenic | 40.0% | |
| GACAACAACTGCAGAAACAA+TGG | - | chr3_4:52413746-52413765 | Msa0506200:intron | 40.0% | |
| CTGCAGAAACAATGGAGAAA+CGG | - | chr3_4:52413754-52413773 | Msa0506200:intron | 40.0% | |
| TGCAGAAACAATGGAGAAAC+GGG | - | chr3_4:52413755-52413774 | Msa0506200:intron | 40.0% | |
| ! | AATTGATGGTCCAGAAGATC+CGG | + | chr3_4:52413903-52413922 | None:intergenic | 40.0% |
| CACATCATATGGACAAGTCT+GGG | + | chr3_4:52414048-52414067 | None:intergenic | 40.0% | |
| !! | GTGTAACTTGTGGTTCTGAT+GGG | - | chr3_4:52414216-52414235 | Msa0506200:intron | 40.0% |
| !! | TGTAACTTGTGGTTCTGATG+GGG | - | chr3_4:52414217-52414236 | Msa0506200:intron | 40.0% |
| ! | ATCTAAGGTGTTTGAGGATG+CGG | + | chr3_4:52414245-52414264 | None:intergenic | 40.0% |
| ! | TGGATCATCTAAGGTGTTTG+AGG | + | chr3_4:52414251-52414270 | None:intergenic | 40.0% |
| ATGTCTTCTGGATTATTCCG+TGG | - | chr3_4:52414273-52414292 | Msa0506200:intron | 40.0% | |
| AGTCGGTAATTTCGCAGAAA+CGG | + | chr3_4:52414317-52414336 | None:intergenic | 40.0% | |
| ! | GACTTCTTCCTTTTGTCAAC+TGG | - | chr3_4:52414333-52414352 | Msa0506200:intron | 40.0% |
| ACAAGCATCCAGTTGACAAA+AGG | + | chr3_4:52414344-52414363 | None:intergenic | 40.0% | |
| GTTGTTTGGACACTATGTCA+GGG | + | chr3_4:52414546-52414565 | None:intergenic | 40.0% | |
| ! | GAACTTTGTTTGAGATCGCA+AGG | + | chr3_4:52414613-52414632 | None:intergenic | 40.0% |
| TTCTCTCCATCCAATTATGC+TGG | - | chr3_4:52414630-52414649 | Msa0506200:intron | 40.0% | |
| TCTCTCCATCCAATTATGCT+GGG | - | chr3_4:52414631-52414650 | Msa0506200:intron | 40.0% | |
| GAAATCCCAGCATAATTGGA+TGG | + | chr3_4:52414639-52414658 | None:intergenic | 40.0% | |
| TTATGAACATGTGGTTGCCT+TGG | + | chr3_4:52414721-52414740 | None:intergenic | 40.0% | |
| AACGAAGTGAGCCATTATGA+AGG | + | chr3_4:52414762-52414781 | None:intergenic | 40.0% | |
| TTCGTTACACGTGTTATCAG+AGG | - | chr3_4:52414776-52414795 | Msa0506200:intron | 40.0% | |
| ! | TTTTTACATTGGCCCAAGTC+GGG | + | chr3_4:52415004-52415023 | None:intergenic | 40.0% |
| CAAGATCCATACTCTTGTAG+CGG | - | chr3_4:52415435-52415454 | Msa0506200:intron | 40.0% | |
| ! | TCTTTTCCGCTACAAGAGTA+TGG | + | chr3_4:52415444-52415463 | None:intergenic | 40.0% |
| GGTGGTCAAAATAGTCTGTT+AGG | + | chr3_4:52416077-52416096 | None:intergenic | 40.0% | |
| TCATGCCTTTCTTCTTACTC+TGG | + | chr3_4:52416175-52416194 | None:intergenic | 40.0% | |
| ! | CAGTTTTCCAATCACTACCA+TGG | - | chr3_4:52416233-52416252 | Msa0506200:intron | 40.0% |
| !! | TTTCGAATTTCTAGCAGCCA+TGG | + | chr3_4:52416253-52416272 | None:intergenic | 40.0% |
| AACTGATGACTCGAAGAGAA+AGG | - | chr3_4:52416284-52416303 | Msa0506200:intron | 40.0% | |
| TCGAAGAGAAAGGCAACATT+TGG | - | chr3_4:52416294-52416313 | Msa0506200:intron | 40.0% | |
| GGAAAACAATGCTCAAGCAA+TGG | - | chr3_4:52416602-52416621 | Msa0506200:intron | 40.0% | |
| ATCTGGACTTCTTCTTTGGA+TGG | + | chr3_4:52416633-52416652 | None:intergenic | 40.0% | |
| ATCCAAAGAAGAAGTCCAGA+TGG | - | chr3_4:52416632-52416651 | Msa0506200:intron | 40.0% | |
| !! | AAAATCGATGGTGGATCATG+AGG | - | chr3_4:52416695-52416714 | Msa0506200:intron | 40.0% |
| !! | AAATCGATGGTGGATCATGA+GGG | - | chr3_4:52416696-52416715 | Msa0506200:intron | 40.0% |
| ATTCATACGGGTGAATTGGA+TGG | - | chr3_4:52416816-52416835 | Msa0506200:intron | 40.0% | |
| GGTGAATTGGATGGAAATGT+TGG | - | chr3_4:52416825-52416844 | Msa0506200:intron | 40.0% | |
| !! | AAGCGCTGATTAGGATTGTC+AGG | - | chr3_4:52408363-52408382 | Msa0506200:CDS | 45.0% |
| ACTTCTTTGTGGTGCCTAAG+TGG | - | chr3_4:52409298-52409317 | Msa0506200:intron | 45.0% | |
| CTTTGTGGTGTCTAAGTGGA+TGG | - | chr3_4:52409336-52409355 | Msa0506200:intron | 45.0% | |
| CTTTATTCGTTCGTCACAGG+GGG | + | chr3_4:52410181-52410200 | None:intergenic | 45.0% | |
| CCTTTATTCGTTCGTCACAG+GGG | + | chr3_4:52410182-52410201 | None:intergenic | 45.0% | |
| GTGGGTTTGGACTGAAAACT+AGG | - | chr3_4:52410386-52410405 | Msa0506200:intron | 45.0% | |
| CTGACCCATTTGACTCACTT+TGG | + | chr3_4:52410525-52410544 | None:intergenic | 45.0% | |
| AAGTGAGTCAAATGGGTCAG+TGG | - | chr3_4:52410525-52410544 | Msa0506200:intron | 45.0% | |
| AGTGAGTCAAATGGGTCAGT+GGG | - | chr3_4:52410526-52410545 | Msa0506200:intron | 45.0% | |
| !! | GGGTTGATGATATATGGCGT+TGG | - | chr3_4:52410546-52410565 | Msa0506200:intron | 45.0% |
| ! | GGCGTTGGAAGTTTGATTAG+AGG | - | chr3_4:52410561-52410580 | Msa0506200:intron | 45.0% |
| !!! | GAGGAGGGGCTTTTTTGAAA+TGG | - | chr3_4:52410580-52410599 | Msa0506200:intron | 45.0% |
| !!! | GAGGGGCTTTTTTGAAATGG+AGG | - | chr3_4:52410583-52410602 | Msa0506200:intron | 45.0% |
| AATGGAGGAGCAAATGTTGG+GGG | - | chr3_4:52410598-52410617 | Msa0506200:intron | 45.0% | |
| GAGTGAAAACTTCCATCGAC+AGG | - | chr3_4:52410734-52410753 | Msa0506200:intron | 45.0% | |
| TTACAGCTCAAAATGCCAGC+TGG | - | chr3_4:52411391-52411410 | Msa0506200:intron | 45.0% | |
| !! | ACCTCAGGTTGAGGTTCATA+GGG | + | chr3_4:52411723-52411742 | None:intergenic | 45.0% |
| !! | AACCTCAGGTTGAGGTTCAT+AGG | + | chr3_4:52411724-52411743 | None:intergenic | 45.0% |
| ATGAACCTCAACCTGAGGTT+TGG | - | chr3_4:52411724-52411743 | Msa0506200:intron | 45.0% | |
| CTTTCGACTTCACATGGTGA+TGG | + | chr3_4:52411750-52411769 | None:intergenic | 45.0% | |
| CATCACCATGTGAAGTCGAA+AGG | - | chr3_4:52411748-52411767 | Msa0506200:intron | 45.0% | |
| TGTGAACAACGATATGGCAG+TGG | - | chr3_4:52411950-52411969 | Msa0506200:intron | 45.0% | |
| GACCACAAATTGAAGGACCT+TGG | - | chr3_4:52412002-52412021 | Msa0506200:intron | 45.0% | |
| GCAGTGGAACCAATTGTAGT+TGG | + | chr3_4:52412082-52412101 | None:intergenic | 45.0% | |
| ATTTCCTCATTCGTGGATGG+TGG | + | chr3_4:52412110-52412129 | None:intergenic | 45.0% | |
| GTCATTTCCTCATTCGTGGA+TGG | + | chr3_4:52412113-52412132 | None:intergenic | 45.0% | |
| GGGGACAATACCATACCATT+TGG | - | chr3_4:52412224-52412243 | Msa0506200:intron | 45.0% | |
| ATCGACCTCACCAAATGGTA+TGG | + | chr3_4:52412237-52412256 | None:intergenic | 45.0% | |
| GGTAGCCGTTGAGTTTGATT+GGG | + | chr3_4:52412670-52412689 | None:intergenic | 45.0% | |
| TGGTAGCCGTTGAGTTTGAT+TGG | + | chr3_4:52412671-52412690 | None:intergenic | 45.0% | |
| TAGAGTTTAGCGGCATAGGA+TGG | + | chr3_4:52413211-52413230 | None:intergenic | 45.0% | |
| TCTTTCTTTCGTGATCGGTG+TGG | + | chr3_4:52413353-52413372 | None:intergenic | 45.0% | |
| !! | CTTGAGAGTGTTCGATAGAC+CGG | - | chr3_4:52413453-52413472 | Msa0506200:CDS | 45.0% |
| !! | TTGAGAGTGTTCGATAGACC+GGG | - | chr3_4:52413454-52413473 | Msa0506200:CDS | 45.0% |
| ACAACAAGTCTTGGGAAACC+CGG | + | chr3_4:52413475-52413494 | None:intergenic | 45.0% | |
| CTTGAATCGTTACCGTCAAC+CGG | - | chr3_4:52413672-52413691 | Msa0506200:intron | 45.0% | |
| ! | AGATGGTCAGGTTGTCTTTC+CGG | + | chr3_4:52413694-52413713 | None:intergenic | 45.0% |
| CAAAAGTCCTCCGCAATCAT+AGG | + | chr3_4:52413783-52413802 | None:intergenic | 45.0% | |
| ! | CTATGATTGCGGAGGACTTT+TGG | - | chr3_4:52413781-52413800 | Msa0506200:intron | 45.0% |
| TGTACAGAACCAGAGAGATC+AGG | + | chr3_4:52413831-52413850 | None:intergenic | 45.0% | |
| CTCTCAATACCCCTCACTAT+CGG | - | chr3_4:52413872-52413891 | Msa0506200:intron | 45.0% | |
| TCAGAATCCAACGTGAGGAT+CGG | - | chr3_4:52413947-52413966 | Msa0506200:intron | 45.0% | |
| CCACATCATATGGACAAGTC+TGG | + | chr3_4:52414049-52414068 | None:intergenic | 45.0% | |
| CCAGACTTGTCCATATGATG+TGG | - | chr3_4:52414046-52414065 | Msa0506200:intron | 45.0% | |
| !! | CATTCCGAAATAGAGTGTCG+AGG | + | chr3_4:52414170-52414189 | None:intergenic | 45.0% |
| CTCGACACTCTATTTCGGAA+TGG | - | chr3_4:52414168-52414187 | Msa0506200:intron | 45.0% | |
| GACACTCTATTTCGGAATGG+CGG | - | chr3_4:52414171-52414190 | Msa0506200:intron | 45.0% | |
| CCACAAGTTACACGCATAGA+AGG | + | chr3_4:52414209-52414228 | None:intergenic | 45.0% | |
| CCTTCTATGCGTGTAACTTG+TGG | - | chr3_4:52414206-52414225 | Msa0506200:intron | 45.0% | |
| !! | CGTGTAACTTGTGGTTCTGA+TGG | - | chr3_4:52414215-52414234 | Msa0506200:intron | 45.0% |
| GATTGAATATGAGGGGTTGC+CGG | + | chr3_4:52414445-52414464 | None:intergenic | 45.0% | |
| CGGTGGAGATTGAATATGAG+GGG | + | chr3_4:52414452-52414471 | None:intergenic | 45.0% | |
| CCGGTGGAGATTGAATATGA+GGG | + | chr3_4:52414453-52414472 | None:intergenic | 45.0% | |
| CCCTCATATTCAATCTCCAC+CGG | - | chr3_4:52414450-52414469 | Msa0506200:intron | 45.0% | |
| CCTCATATTCAATCTCCACC+GGG | - | chr3_4:52414451-52414470 | Msa0506200:intron | 45.0% | |
| !! | ACACTATGTCAGGGTATTGG+TGG | + | chr3_4:52414537-52414556 | None:intergenic | 45.0% |
| TGGACACTATGTCAGGGTAT+TGG | + | chr3_4:52414540-52414559 | None:intergenic | 45.0% | |
| GGTTGTTTGGACACTATGTC+AGG | + | chr3_4:52414547-52414566 | None:intergenic | 45.0% | |
| ! | TTGTTTGAGATCGCAAGGGT+TGG | + | chr3_4:52414608-52414627 | None:intergenic | 45.0% |
| ! | GGTGCGGATGATAACGAATA+AGG | + | chr3_4:52414700-52414719 | None:intergenic | 45.0% |
| ATTCGTTATCATCCGCACCA+AGG | - | chr3_4:52414701-52414720 | Msa0506200:intron | 45.0% | |
| AAATTTGTCTGGTCCCGACT+TGG | - | chr3_4:52414988-52415007 | Msa0506200:intron | 45.0% | |
| AATTTGTCTGGTCCCGACTT+GGG | - | chr3_4:52414989-52415008 | Msa0506200:intron | 45.0% | |
| ATTACGTTGCAGCGAACCTT+GGG | + | chr3_4:52415251-52415270 | None:intergenic | 45.0% | |
| AATTACGTTGCAGCGAACCT+TGG | + | chr3_4:52415252-52415271 | None:intergenic | 45.0% | |
| CGCTGCAACGTAATTCTAAG+AGG | - | chr3_4:52415257-52415276 | Msa0506200:intron | 45.0% | |
| AAATTGCACTTTGGCCCTCT+TGG | - | chr3_4:52415759-52415778 | Msa0506200:intron | 45.0% | |
| CACCATCTGGACTTCTTCTT+TGG | + | chr3_4:52416637-52416656 | None:intergenic | 45.0% | |
| AGAAGAAGTCCAGATGGTGT+TGG | - | chr3_4:52416638-52416657 | Msa0506200:intron | 45.0% | |
| TGAACTTGTCCAACACCATC+TGG | + | chr3_4:52416650-52416669 | None:intergenic | 45.0% | |
| !!! | CTTCTCTAGGGCTTTTGCTA+TGG | + | chr3_4:52416736-52416755 | None:intergenic | 45.0% |
| !! | TCTTTATAAAAAAAAAAATT+AGG | + | chr3_4:52409903-52409922 | None:intergenic | 5.0% |
| !!! | AATGTTTATTTTATAAAATT+GGG | - | chr3_4:52414807-52414826 | Msa0506200:intron | 5.0% |
| !!! | ATAATAAGATAATAATTTTT+CGG | - | chr3_4:52415042-52415061 | Msa0506200:intron | 5.0% |
| !! | ATAAAATATGTTTATATAAA+TGG | - | chr3_4:52415797-52415816 | Msa0506200:intron | 5.0% |
| !! | TAAAATATGTTTATATAAAT+GGG | - | chr3_4:52415798-52415817 | Msa0506200:intron | 5.0% |
| ACGCGATGAAAACGTACGCA+GGG | - | chr3_4:52409656-52409675 | Msa0506200:intron | 50.0% | |
| CCCCTGTGACGAACGAATAA+AGG | - | chr3_4:52410179-52410198 | Msa0506200:intron | 50.0% | |
| CAAGCGTAGAGAGCAACATG+AGG | + | chr3_4:52410315-52410334 | None:intergenic | 50.0% | |
| GTTGCACTCAAACCTGTCGA+TGG | + | chr3_4:52410749-52410768 | None:intergenic | 50.0% | |
| !! | CCTCAGGTTGAGGTTCATAG+GGG | + | chr3_4:52411722-52411741 | None:intergenic | 50.0% |
| AGCACCCTTTCGACTTCACA+TGG | + | chr3_4:52411756-52411775 | None:intergenic | 50.0% | |
| GAAGGACCTTGGTAGAAGGT+TGG | - | chr3_4:52412013-52412032 | Msa0506200:intron | 50.0% | |
| GGGTGTATGGGAAGACATAG+TGG | - | chr3_4:52412337-52412356 | Msa0506200:intron | 50.0% | |
| ACATTTGCAGTGGCAAGTCC+CGG | - | chr3_4:52412466-52412485 | Msa0506200:intron | 50.0% | |
| ! | CTCGGGGTGCCAATCTTATT+GGG | + | chr3_4:52413182-52413201 | None:intergenic | 50.0% |
| ! | TCTCGGGGTGCCAATCTTAT+TGG | + | chr3_4:52413183-52413202 | None:intergenic | 50.0% |
| CATAGGATGGAGGTTTCTCG+GGG | + | chr3_4:52413198-52413217 | None:intergenic | 50.0% | |
| GCATAGGATGGAGGTTTCTC+GGG | + | chr3_4:52413199-52413218 | None:intergenic | 50.0% | |
| GGCATAGGATGGAGGTTTCT+CGG | + | chr3_4:52413200-52413219 | None:intergenic | 50.0% | |
| AGTTTAGCGGCATAGGATGG+AGG | + | chr3_4:52413208-52413227 | None:intergenic | 50.0% | |
| TGGGAATGCTATGTTACCGC+CGG | + | chr3_4:52413391-52413410 | None:intergenic | 50.0% | |
| CGGTCTATCGAACACTCTCA+AGG | + | chr3_4:52413455-52413474 | None:intergenic | 50.0% | |
| TTGGTGAAGACCGGTGTGAA+TGG | - | chr3_4:52413519-52413538 | Msa0506200:CDS | 50.0% | |
| AGCTGAAGAGCCATTCACAC+CGG | + | chr3_4:52413532-52413551 | None:intergenic | 50.0% | |
| CAGCAACATGGTCACGCAAA+GGG | + | chr3_4:52413637-52413656 | None:intergenic | 50.0% | |
| ACAGCAACATGGTCACGCAA+AGG | + | chr3_4:52413638-52413657 | None:intergenic | 50.0% | |
| CGATTCAAGCATGATACCCG+AGG | + | chr3_4:52413661-52413680 | None:intergenic | 50.0% | |
| CAGGTTGTCTTTCCGGTTGA+CGG | + | chr3_4:52413687-52413706 | None:intergenic | 50.0% | |
| GAAACGGGAGCCTATGATTG+CGG | - | chr3_4:52413770-52413789 | Msa0506200:intron | 50.0% | |
| CAGGAAGACGAGGTCATGTT+GGG | + | chr3_4:52413812-52413831 | None:intergenic | 50.0% | |
| TCAGGAAGACGAGGTCATGT+TGG | + | chr3_4:52413813-52413832 | None:intergenic | 50.0% | |
| TGTTCAACCGATCCTCACGT+TGG | + | chr3_4:52413957-52413976 | None:intergenic | 50.0% | |
| AGAAACGGTACACGCAATGG+TGG | + | chr3_4:52414302-52414321 | None:intergenic | 50.0% | |
| CCCGGTGGAGATTGAATATG+AGG | + | chr3_4:52414454-52414473 | None:intergenic | 50.0% | |
| ! | ACGCGAAGGTTTTGCATTCC+CGG | + | chr3_4:52414472-52414491 | None:intergenic | 50.0% |
| ! | TTTGAGATCGCAAGGGTTGG+CGG | + | chr3_4:52414605-52414624 | None:intergenic | 50.0% |
| AACATGTGGTTGCCTTGGTG+CGG | + | chr3_4:52414716-52414735 | None:intergenic | 50.0% | |
| ! | CTAGCAGCCATGGTAGTGAT+TGG | + | chr3_4:52416243-52416262 | None:intergenic | 50.0% |
| TGGATCATGAGGGCTTCTTG+AGG | - | chr3_4:52416706-52416725 | Msa0506200:intron | 50.0% | |
| !! | CTTGGTGGTGCTTAAGTGGC+CGG | - | chr3_4:52409262-52409281 | Msa0506200:intron | 55.0% |
| CTTTGTGGTGCCTAAGTGGC+TGG | - | chr3_4:52409302-52409321 | Msa0506200:intron | 55.0% | |
| GACGCGATGAAAACGTACGC+AGG | - | chr3_4:52409655-52409674 | Msa0506200:intron | 55.0% | |
| CCCCTATGAACCTCAACCTG+AGG | - | chr3_4:52411719-52411738 | Msa0506200:intron | 55.0% | |
| ! | GATGGCCAAACCTCAGGTTG+AGG | + | chr3_4:52411732-52411751 | None:intergenic | 55.0% |
| !! | CATGGTGATGGCCAAACCTC+AGG | + | chr3_4:52411738-52411757 | None:intergenic | 55.0% |
| ! | TCCTCATTCGTGGATGGTGG+CGG | + | chr3_4:52412107-52412126 | None:intergenic | 55.0% |
| CCAGGATCGACCTCACCAAA+TGG | + | chr3_4:52412242-52412261 | None:intergenic | 55.0% | |
| ! | CCATTTGGTGAGGTCGATCC+TGG | - | chr3_4:52412239-52412258 | Msa0506200:intron | 55.0% |
| !! | GTTGGGTATCGAGACCTCGT+AGG | - | chr3_4:52412557-52412576 | Msa0506200:intron | 55.0% |
| CGTGACCATGTTGCTGTCCT+CGG | - | chr3_4:52413641-52413660 | Msa0506200:intron | 55.0% | |
| GTGACCATGTTGCTGTCCTC+GGG | - | chr3_4:52413642-52413661 | Msa0506200:intron | 55.0% | |
| GATACCCGAGGACAGCAACA+TGG | + | chr3_4:52413649-52413668 | None:intergenic | 55.0% | |
| ! | TATGCACTGCGTGCTGCTCA+AGG | - | chr3_4:52413724-52413743 | Msa0506200:intron | 55.0% |
| CCAGAGAGATCAGGAAGACG+AGG | + | chr3_4:52413822-52413841 | None:intergenic | 55.0% | |
| CCTCGTCTTCCTGATCTCTC+TGG | - | chr3_4:52413819-52413838 | Msa0506200:intron | 55.0% | |
| TCCGGTGGATCCGATAGTGA+GGG | + | chr3_4:52413885-52413904 | None:intergenic | 55.0% | |
| ATCCGGTGGATCCGATAGTG+AGG | + | chr3_4:52413886-52413905 | None:intergenic | 55.0% | |
| ATCGGATCCACCGGATCTTC+TGG | - | chr3_4:52413890-52413909 | Msa0506200:intron | 55.0% | |
| TGATGGTCCAGAAGATCCGG+TGG | + | chr3_4:52413900-52413919 | None:intergenic | 55.0% | |
| ACAACCTGCGCCTTCTCTAC+TGG | - | chr3_4:52414121-52414140 | Msa0506200:intron | 55.0% | |
| GCTTGAGCAGCCAGTAGAGA+AGG | + | chr3_4:52414134-52414153 | None:intergenic | 55.0% | |
| ! | ACACGCAATGGTGGAAGCCA+CGG | + | chr3_4:52414293-52414312 | None:intergenic | 55.0% |
| CGCAGAAACGGTACACGCAA+TGG | + | chr3_4:52414305-52414324 | None:intergenic | 55.0% | |
| ! | CGAAGGTTTTGCATTCCCGG+TGG | + | chr3_4:52414469-52414488 | None:intergenic | 55.0% |
| ! | TTGAGATCGCAAGGGTTGGC+GGG | + | chr3_4:52414604-52414623 | None:intergenic | 55.0% |
| !! | TCATTCGTGGATGGTGGCGG+CGG | + | chr3_4:52412104-52412123 | None:intergenic | 60.0% |
| ACGGGAGCCTATGATTGCGG+AGG | - | chr3_4:52413773-52413792 | Msa0506200:intron | 60.0% | |
| CCGGTGGATCCGATAGTGAG+GGG | + | chr3_4:52413884-52413903 | None:intergenic | 60.0% | |
| CCCCTCACTATCGGATCCAC+CGG | - | chr3_4:52413881-52413900 | Msa0506200:intron | 60.0% | |
| GAAGTTACGGTGGGACGCGA+AGG | + | chr3_4:52414486-52414505 | None:intergenic | 60.0% | |
| GCCGCCACCATCCACGAATG+AGG | - | chr3_4:52412103-52412122 | Msa0506200:intron | 65.0% | |
| ! | GCAGCCAGTAGAGAAGGCGC+AGG | + | chr3_4:52414128-52414147 | None:intergenic | 65.0% |
| ACAGCACGTGGCTCGCGCGT+AGG | - | chr3_4:52410462-52410481 | Msa0506200:intron | 70.0% | |
| CAGCACGTGGCTCGCGCGTA+GGG | - | chr3_4:52410463-52410482 | Msa0506200:intron | 70.0% | |
| AGCACGTGGCTCGCGCGTAG+GGG | - | chr3_4:52410464-52410483 | Msa0506200:intron | 70.0% | |
| !! | GTGGATGGTGGCGGCGGCAG+TGG | + | chr3_4:52412098-52412117 | None:intergenic | 75.0% |
| ! | CGTGGCTCGCGCGTAGGGGC+AGG | - | chr3_4:52410468-52410487 | Msa0506200:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 52408214 | 52416944 | 52408214 | ID=Msa0506200;Name=Msa0506200 |
| chr3_4 | mRNA | 52408214 | 52416944 | 52408214 | ID=Msa0506200-mRNA-1;Parent=Msa0506200;Name=Msa0506200-mRNA-1;_AED=0.28;_eAED=0.29;_QI=0|0|0|0.71|0|0|7|0|313 |
| chr3_4 | exon | 52416940 | 52416944 | 52416940 | ID=Msa0506200-mRNA-1:exon:11443;Parent=Msa0506200-mRNA-1 |
| chr3_4 | exon | 52414082 | 52414087 | 52414082 | ID=Msa0506200-mRNA-1:exon:11442;Parent=Msa0506200-mRNA-1 |
| chr3_4 | exon | 52413358 | 52413589 | 52413358 | ID=Msa0506200-mRNA-1:exon:11441;Parent=Msa0506200-mRNA-1 |
| chr3_4 | exon | 52413307 | 52413313 | 52413307 | ID=Msa0506200-mRNA-1:exon:11440;Parent=Msa0506200-mRNA-1 |
| chr3_4 | exon | 52413168 | 52413215 | 52413168 | ID=Msa0506200-mRNA-1:exon:11439;Parent=Msa0506200-mRNA-1 |
| chr3_4 | exon | 52412908 | 52413155 | 52412908 | ID=Msa0506200-mRNA-1:exon:11438;Parent=Msa0506200-mRNA-1 |
| chr3_4 | exon | 52408214 | 52408609 | 52408214 | ID=Msa0506200-mRNA-1:exon:11437;Parent=Msa0506200-mRNA-1 |
| chr3_4 | CDS | 52416940 | 52416944 | 52416940 | ID=Msa0506200-mRNA-1:cds;Parent=Msa0506200-mRNA-1 |
| chr3_4 | CDS | 52414082 | 52414087 | 52414082 | ID=Msa0506200-mRNA-1:cds;Parent=Msa0506200-mRNA-1 |
| chr3_4 | CDS | 52413358 | 52413589 | 52413358 | ID=Msa0506200-mRNA-1:cds;Parent=Msa0506200-mRNA-1 |
| chr3_4 | CDS | 52413307 | 52413313 | 52413307 | ID=Msa0506200-mRNA-1:cds;Parent=Msa0506200-mRNA-1 |
| chr3_4 | CDS | 52413168 | 52413215 | 52413168 | ID=Msa0506200-mRNA-1:cds;Parent=Msa0506200-mRNA-1 |
| chr3_4 | CDS | 52412908 | 52413155 | 52412908 | ID=Msa0506200-mRNA-1:cds;Parent=Msa0506200-mRNA-1 |
| chr3_4 | CDS | 52408214 | 52408609 | 52408214 | ID=Msa0506200-mRNA-1:cds;Parent=Msa0506200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
