AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0509290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509290 MtrunA17_Chr3g0114161 94.631 1248 44 1 34 1281 24 1248 0.0 2429
Msa0509290 MtrunA17_Chr7g0224051 79.766 855 153 8 427 1280 281 1116 0.0 1364
Msa0509290 MtrunA17_Chr7g0224051 72.569 288 72 2 61 347 1 282 2.10e-128 424
Msa0509290 MtrunA17_Chr5g0437621 55.707 1323 471 26 35 1280 19 1303 0.0 1335
Msa0509290 MtrunA17_Chr1g0191141 72.304 881 214 11 402 1280 250 1102 0.0 1247
Msa0509290 MtrunA17_Chr1g0191141 65.126 238 78 3 28 265 2 234 3.12e-86 305
Msa0509290 MtrunA17_Chr7g0233021 35.359 724 395 18 564 1261 537 1213 1.53e-112 382
Msa0509290 MtrunA17_Chr7g0233031 33.912 749 423 18 543 1267 532 1232 2.09e-112 382
Msa0509290 MtrunA17_Chr7g0225791 33.607 732 436 17 543 1261 574 1268 1.38e-108 372
Msa0509290 MtrunA17_Chr7g0232971 33.119 776 428 20 540 1281 580 1298 1.82e-105 363
Msa0509290 MtrunA17_Chr4g0047081 33.608 729 411 18 564 1269 548 1226 6.56e-105 361
Msa0509290 MtrunA17_Chr7g0224031 73.973 219 56 1 842 1060 25 242 2.65e-102 324
Msa0509290 MtrunA17_Chr7g0232991 33.549 617 350 15 684 1269 61 648 1.56e-91 310
Msa0509290 MtrunA17_Chr2g0296421 31.392 704 382 22 545 1236 387 1001 1.88e-88 310
Msa0509290 MtrunA17_Chr8g0352361 30.929 721 408 23 522 1236 216 852 1.48e-85 299
Msa0509290 MtrunA17_Chr7g0233001 32.710 535 323 10 746 1269 3 511 2.08e-77 266
Msa0509290 MtrunA17_Chr7g0224021 74.336 113 27 1 665 777 1 111 2.18e-51 176
Msa0509290 MtrunA17_Chr2g0320781 34.818 247 145 6 989 1229 4 240 3.86e-38 143
Msa0509290 MtrunA17_Chr8g0384531 25.729 583 332 25 678 1228 367 880 2.76e-31 133
Msa0509290 MtrunA17_Chr5g0393461 23.716 662 370 26 654 1274 159 726 4.53e-28 122
Msa0509290 MtrunA17_Chr5g0403921 26.325 547 316 20 730 1264 206 677 5.93e-27 118
Msa0509290 MtrunA17_Chr4g0052341 24.505 555 310 20 726 1255 763 1233 3.84e-24 110
Msa0509290 MtrunA17_Chr1g0190391 29.461 241 139 8 689 925 576 789 3.28e-23 107
Msa0509290 MtrunA17_Chr3g0137091 24.691 567 323 19 730 1270 311 799 1.29e-21 102
Msa0509290 MtrunA17_Chr5g0394201 23.636 550 323 17 724 1263 379 841 3.58e-19 94.4
Msa0509290 MtrunA17_Chr1g0190381 35.583 163 93 4 1088 1241 196 355 1.38e-18 91.3
Msa0509290 MtrunA17_Chr1g0205891 23.273 550 324 17 724 1262 392 854 2.21e-16 85.1
Msa0509290 MtrunA17_Chr5g0442141 22.510 502 316 12 729 1225 638 1071 1.33e-15 82.8
Msa0509290 MtrunA17_Chr4g0040301 32.335 167 100 4 1091 1250 389 549 4.40e-15 80.5
Msa0509290 MtrunA17_Chr3g0114111 88.889 36 4 0 1234 1269 1 36 1.14e-13 67.4
Msa0509290 MtrunA17_Chr1g0183681 31.429 140 90 3 1097 1236 750 883 5.28e-13 73.9
Msa0509290 MtrunA17_Chr3g0095091 28.729 181 120 4 1049 1228 856 1028 9.73e-12 70.1
Msa0509290 MtrunA17_Chr7g0232121 22.464 552 318 19 729 1246 60 535 1.14e-11 69.7
Msa0509290 MtrunA17_Chr7g0257101 29.545 176 116 5 1063 1237 1173 1341 1.35e-11 69.7
Msa0509290 MtrunA17_Chr7g0255821 38.298 94 57 1 1127 1219 690 783 6.00e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509290 AT5G20420.1 61.772 790 276 12 502 1280 486 1260 0.0 956
Msa0509290 AT5G20420.1 38.226 327 158 11 26 335 9 308 3.10e-50 195
Msa0509290 AT3G42670.2 58.796 847 300 14 457 1280 434 1254 0.0 954
Msa0509290 AT3G42670.2 38.732 284 154 7 35 316 18 283 1.67e-47 186
Msa0509290 AT3G42670.3 58.796 847 300 14 457 1280 434 1254 0.0 954
Msa0509290 AT3G42670.3 38.732 284 154 7 35 316 18 283 1.67e-47 186
Msa0509290 AT3G42670.1 58.796 847 300 14 457 1280 434 1254 0.0 954
Msa0509290 AT3G42670.1 38.732 284 154 7 35 316 18 283 1.67e-47 186
Msa0509290 AT3G42670.4 58.657 849 300 14 457 1280 434 1256 0.0 954
Msa0509290 AT3G42670.4 38.732 284 154 7 35 316 18 283 1.85e-47 186
Msa0509290 AT3G24340.1 32.852 761 420 20 524 1269 430 1114 5.98e-107 365
Msa0509290 AT1G05490.1 32.603 730 428 19 562 1265 693 1384 1.28e-102 357
Msa0509290 AT2G21450.3 30.629 715 402 21 544 1236 40 682 8.01e-82 285
Msa0509290 AT2G21450.2 31.402 656 368 19 598 1236 190 780 2.62e-81 285
Msa0509290 AT2G21450.1 31.402 656 368 19 598 1236 183 773 2.95e-81 285
Msa0509290 AT2G16390.1 30.472 699 396 19 551 1236 226 847 2.40e-79 281
Msa0509290 AT2G16390.2 30.472 699 396 19 551 1236 229 850 2.70e-79 281
Msa0509290 AT5G63950.1 25.694 576 326 23 685 1228 367 872 3.30e-29 127
Msa0509290 AT5G63950.2 26.178 573 310 24 685 1228 367 855 1.59e-28 125
Msa0509290 AT3G19210.2 23.051 603 349 22 695 1260 180 704 5.25e-28 123
Msa0509290 AT3G19210.3 23.471 605 346 23 695 1260 180 706 1.92e-27 120
Msa0509290 AT3G19210.1 23.471 605 346 23 695 1260 180 706 1.92e-27 121
Msa0509290 AT1G08600.4 25.872 344 188 12 694 1025 718 1006 6.54e-24 110
Msa0509290 AT1G08600.4 34.969 163 94 4 1088 1241 1123 1282 1.23e-17 89.7
Msa0509290 AT1G08600.3 25.872 344 188 12 694 1025 718 1006 6.54e-24 110
Msa0509290 AT1G08600.3 34.969 163 94 4 1088 1241 1123 1282 1.23e-17 89.7
Msa0509290 AT1G08600.2 25.872 344 188 12 694 1025 718 1006 6.54e-24 110
Msa0509290 AT1G08600.2 34.969 163 94 4 1088 1241 1123 1282 1.23e-17 89.7
Msa0509290 AT5G44800.1 25.946 555 306 24 726 1263 707 1173 1.42e-21 102
Msa0509290 AT4G31900.2 24.007 554 291 21 685 1219 173 615 9.85e-20 96.7
Msa0509290 AT4G31900.1 24.007 554 291 21 685 1219 214 656 1.07e-19 96.3
Msa0509290 AT4G31900.3 24.007 554 291 21 685 1219 214 656 1.14e-19 96.3
Msa0509290 AT2G25170.1 24.213 508 294 19 729 1219 294 727 2.31e-18 92.0
Msa0509290 AT2G25170.4 24.213 508 294 19 729 1219 294 727 2.31e-18 92.0
Msa0509290 AT2G25170.3 24.213 508 294 19 729 1219 320 753 2.85e-18 92.0
Msa0509290 AT1G08600.1 34.969 163 94 4 1088 1241 1102 1261 1.11e-17 90.1
Msa0509290 AT3G06010.1 24.275 552 318 19 724 1263 419 882 5.44e-17 87.4
Msa0509290 AT1G03750.1 30.387 181 112 5 1078 1250 523 697 6.12e-16 84.0
Msa0509290 AT5G66750.1 34.091 176 109 4 1098 1272 540 709 1.00e-15 83.2
Msa0509290 AT2G25170.2 26.171 363 200 14 871 1219 436 744 1.03e-15 83.6
Msa0509290 AT2G44980.1 24.853 511 293 21 736 1232 80 513 5.05e-14 77.8
Msa0509290 AT3G57300.1 32.414 145 92 3 1098 1242 1222 1360 3.24e-12 72.0
Msa0509290 AT3G57300.4 32.414 145 92 3 1098 1242 1222 1360 3.24e-12 72.0
Msa0509290 AT3G57300.2 32.414 145 92 3 1098 1242 1255 1393 4.02e-12 71.6
Msa0509290 AT2G28290.2 39.623 106 63 1 1114 1219 1101 1205 4.49e-12 71.6
Msa0509290 AT2G28290.6 39.623 106 63 1 1114 1219 1102 1206 4.57e-12 71.6
Msa0509290 AT2G28290.3 39.623 106 63 1 1114 1219 1101 1205 4.65e-12 71.6
Msa0509290 AT2G28290.4 39.623 106 63 1 1114 1219 1101 1205 4.65e-12 71.6
Msa0509290 AT2G28290.1 39.623 106 63 1 1114 1219 1101 1205 4.65e-12 71.6
Msa0509290 AT2G28290.5 39.623 106 63 1 1114 1219 1102 1206 4.69e-12 71.6
Msa0509290 AT2G18760.4 30.714 140 91 3 1097 1236 742 875 5.61e-12 71.2
Msa0509290 AT2G18760.1 30.714 140 91 3 1097 1236 742 875 5.61e-12 71.2
Msa0509290 AT2G18760.2 30.714 140 91 3 1097 1236 742 875 5.61e-12 71.2
Msa0509290 AT2G18760.7 30.714 140 91 3 1097 1236 742 875 5.61e-12 71.2
Msa0509290 AT2G18760.5 30.714 140 91 3 1097 1236 742 875 5.61e-12 71.2
Msa0509290 AT2G18760.6 30.714 140 91 3 1097 1236 742 875 5.61e-12 71.2
Msa0509290 AT2G18760.3 30.714 140 91 3 1097 1236 801 934 6.00e-12 71.2
Msa0509290 AT5G19310.2 29.319 191 122 4 1079 1268 427 605 6.57e-12 70.9
Msa0509290 AT5G19310.1 29.319 191 122 4 1079 1268 691 869 7.84e-12 70.9
Msa0509290 AT2G13370.1 33.846 130 79 2 1100 1228 957 1080 1.23e-11 70.1
Msa0509290 AT2G13370.2 33.846 130 79 2 1100 1228 957 1080 1.23e-11 70.1
Msa0509290 AT2G13370.3 33.846 130 79 2 1100 1228 957 1080 1.23e-11 70.1
Msa0509290 AT5G05130.1 34.959 123 74 3 1098 1219 725 842 3.92e-11 68.2

Find 196 sgRNAs with CRISPR-Local

Find 607 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATTAACCTCTTTATTA+AGG 0.150785 3_4:+57695607 None:intergenic
ACATTGTTTCAGAACAATTT+TGG 0.187519 3_4:-57692736 Msa0509290:CDS
ATTAGTCAAATAATGATATT+TGG 0.190711 3_4:+57694891 None:intergenic
TGACGGTGATGGCAAGTTTA+AGG 0.211148 3_4:-57694938 Msa0509290:CDS
CCTCTGAAATTAAGCCTTAT+AGG 0.223041 3_4:-57695509 Msa0509290:CDS
TATAGATTGGATGAAGAAAT+TGG 0.225183 3_4:-57693978 Msa0509290:CDS
AACAAGCATGTTGGAGAAAA+AGG 0.240380 3_4:-57694467 Msa0509290:CDS
TCATCACTTGATATTGTTGT+AGG 0.263435 3_4:+57694808 None:intergenic
AACCTTGATTTAGTGCTTCT+AGG 0.271299 3_4:+57692811 None:intergenic
ACTATCCTTGGATTCTTTCT+TGG 0.272245 3_4:+57694013 None:intergenic
CATATAAGTTGTTCTCTTGT+AGG 0.274870 3_4:+57695077 None:intergenic
TTATAATCTTCATCAACTTT+TGG 0.276698 3_4:+57693483 None:intergenic
TAGTGATGTCAAACATGTTT+TGG 0.279882 3_4:-57693007 Msa0509290:CDS
GCATAACATTGCTGGCTCTA+TGG 0.281856 3_4:-57693325 Msa0509290:CDS
GCAAAATGGCAAAGAGATTA+TGG 0.292136 3_4:-57692074 Msa0509290:CDS
ACATCAAGTTATCTTCTTGA+TGG 0.297384 3_4:-57694358 Msa0509290:CDS
TAGCATAGATATATCAATTC+CGG 0.299300 3_4:+57696131 None:intergenic
CAGAAGAGGATGGTGGTAAG+AGG 0.300780 3_4:-57695026 Msa0509290:CDS
AGAACTTCATGAACAAATTT+CGG 0.305114 3_4:+57692682 None:intergenic
CTTACTGGAATAGACATAAA+TGG 0.309451 3_4:+57696078 None:intergenic
CAAGATTGTGTATCAAGTTA+TGG 0.313307 3_4:-57695352 Msa0509290:CDS
TCGACCGGGCCAGCAGAAAA+TGG 0.318508 3_4:-57691852 Msa0509290:CDS
GGAAGAAAATCCTGATGATT+TGG 0.323484 3_4:-57694413 Msa0509290:CDS
TTCTCTGCTTGCCATTTAGA+AGG 0.325243 3_4:+57691716 None:intergenic
TGGTGCTGATGTGTTGAATT+TGG 0.328233 3_4:-57694845 Msa0509290:CDS
TGCATTAACCTCTTTATTAA+GGG 0.331125 3_4:+57695608 None:intergenic
GCAAAATCAATGATTCTTCC+TGG 0.333207 3_4:-57693045 Msa0509290:CDS
ATTGATATATCTATGCTATT+AGG 0.338830 3_4:-57696126 Msa0509290:CDS
GCTGTCGTCGAACTTGAACC+TGG 0.338982 3_4:+57693066 None:intergenic
ACTTCATGTTGTGGATGATA+TGG 0.339055 3_4:-57694716 Msa0509290:CDS
TCTGATGAATCCCACCTATA+AGG 0.345661 3_4:+57695495 None:intergenic
CTCAACCTCAAGAGGGTAAC+TGG 0.345817 3_4:+57692348 None:intergenic
AGGGCTTTCTCTCAATGCTT+TGG 0.345836 3_4:+57692864 None:intergenic
AATTCTTCTGAGACTCTTCC+TGG 0.348075 3_4:-57692457 Msa0509290:CDS
AGCAAATTTGATTTGAGAAA+AGG 0.352698 3_4:-57692223 Msa0509290:CDS
TCAACTTCATGTGATGGCTT+TGG 0.355507 3_4:+57695195 None:intergenic
TTAATGAAATCGACAACGTT+TGG 0.355745 3_4:-57693413 Msa0509290:CDS
AAGTATTATGTTGAAGCCTT+TGG 0.358364 3_4:+57695559 None:intergenic
ACAGAAACTTCAGAAGAAAA+TGG 0.360997 3_4:-57692380 Msa0509290:CDS
TCATTAATCAATGGTTCATC+AGG 0.361796 3_4:+57693429 None:intergenic
TTGTGGAAGATCCTTCTAAA+TGG 0.362063 3_4:-57691727 Msa0509290:CDS
TTTCTTTGGCATAACATTGC+TGG 0.370580 3_4:-57693333 Msa0509290:CDS
GAAATGTATCCCTTCCCATT+TGG 0.379249 3_4:+57694684 None:intergenic
ACAGTGCAGTGAAGAAAATA+AGG 0.381838 3_4:-57693520 Msa0509290:CDS
AAGATTGTGTATCAAGTTAT+GGG 0.386679 3_4:-57695351 Msa0509290:CDS
TCATCAAGTATCAAGATTCC+AGG 0.400291 3_4:+57692844 None:intergenic
TAATGAAATCGACAACGTTT+GGG 0.400568 3_4:-57693412 Msa0509290:CDS
TGAAGCACTGGGAGGCTGTA+TGG 0.404240 3_4:-57703398 Msa0509290:CDS
GATAGGCGGAATGCCCAAAA+AGG 0.406317 3_4:-57693557 Msa0509290:intron
GCTCAGAACAAATCTTACTT+TGG 0.411413 3_4:+57692198 None:intergenic
AAAGAGATTATGGTACTAAC+AGG 0.411733 3_4:-57692064 Msa0509290:CDS
TCTTTAAAGAGAAGATTAAG+AGG 0.416809 3_4:-57694744 Msa0509290:CDS
TTCAGTATCAATGAAATGTA+AGG 0.418514 3_4:+57696236 None:intergenic
CACAATCTAGATTACTCGTT+GGG 0.425426 3_4:-57695455 Msa0509290:CDS
AGTAATATTCTCAATTCTGT+TGG 0.426455 3_4:+57692766 None:intergenic
GCATTTGAAGCAGTATTGAA+TGG 0.430979 3_4:-57696306 Msa0509290:CDS
AAAGACAATGCTGGTTCTGC+AGG 0.432612 3_4:-57703481 None:intergenic
AAACTGACATTATTAGTCCT+TGG 0.435671 3_4:-57695323 Msa0509290:CDS
ATCATGTTCACAACTATCCT+TGG 0.438359 3_4:+57694001 None:intergenic
AGGACCAGAGGTCGTTTCCT+TGG 0.438685 3_4:+57693183 None:intergenic
ATATAAGTTGTTCTCTTGTA+GGG 0.439124 3_4:+57695078 None:intergenic
AGCATAGATATATCAATTCC+GGG 0.439467 3_4:+57696132 None:intergenic
ATTTCTTGTGCAAAGAAGAA+TGG 0.444673 3_4:-57694865 Msa0509290:CDS
TTGTCGATTTCATTAATCAA+TGG 0.444704 3_4:+57693420 None:intergenic
TGATGATTTGGATGCCTTGT+GGG 0.445174 3_4:-57694401 Msa0509290:CDS
TCAAGTGATGAAGAAGTTGA+TGG 0.452513 3_4:-57694796 Msa0509290:CDS
GTCGTACACATCAATAAAAC+CGG 0.453824 3_4:+57692486 None:intergenic
GAAGCACTGGGAGGCTGTAT+GGG 0.454648 3_4:-57703397 Msa0509290:CDS
CACAAGGCATCCAAATCATC+AGG 0.457690 3_4:+57694403 None:intergenic
CATGATTATGAAGAATGAAA+AGG 0.465758 3_4:-57691636 Msa0509290:CDS
ATCAAAAGCTCAACCTCAAG+AGG 0.468504 3_4:+57692340 None:intergenic
CATGAAGAACAAGATCATAA+AGG 0.469713 3_4:-57694601 Msa0509290:CDS
ACATCAAATTGAGAAACAAT+AGG 0.472158 3_4:+57695255 None:intergenic
ATATCACATGCTCCTGGAGC+AGG 0.473334 3_4:-57693255 Msa0509290:CDS
GATTGAAGATGATATACTTA+GGG 0.473462 3_4:-57691693 Msa0509290:CDS
CTGTCGTCGAACTTGAACCT+GGG 0.474123 3_4:+57693067 None:intergenic
AGATTGAAGATGATATACTT+AGG 0.475140 3_4:-57691694 Msa0509290:CDS
ACACAACCTACGTAACGTTC+AGG 0.477670 3_4:+57695138 None:intergenic
CTAGAAGGTCGTGGAAATCC+AGG 0.481696 3_4:+57693027 None:intergenic
ACACCCTAGTGTTCTTGTCA+TGG 0.484111 3_4:-57692953 Msa0509290:CDS
ATTTCCAAGGAAACGACCTC+TGG 0.484818 3_4:-57693187 Msa0509290:CDS
TGGTGGTAAGAGGGATCAAA+AGG 0.487310 3_4:-57695016 Msa0509290:CDS
CTGGGGAGGTTCGACGGCCA+TGG 0.487953 3_4:+57693085 None:intergenic
CACCCTAGTGTTCTTGTCAT+GGG 0.490664 3_4:-57692952 Msa0509290:CDS
GTGCCGGTTTATCTTATCCA+TGG 0.492001 3_4:-57693102 Msa0509290:CDS
ACAGTAGGCTCTTCTTCAGT+TGG 0.493427 3_4:+57694508 None:intergenic
ACTATCTATTATTTCCATGC+AGG 0.495167 3_4:+57694555 None:intergenic
GAGCTAGACTTGTTTGAAAG+AGG 0.495712 3_4:-57692040 Msa0509290:CDS
GTGTATCAGTTATTGACCAC+CGG 0.497361 3_4:-57691824 Msa0509290:CDS
TATTATGTTGAAGCCTTTGG+AGG 0.500254 3_4:+57695562 None:intergenic
GTTACTTGAAGTTATTTCCA+AGG 0.501704 3_4:-57693200 Msa0509290:CDS
GTAAACTTATATGATGATCA+AGG 0.502369 3_4:-57695654 Msa0509290:CDS
GAACTCTTGAAAATAGAGTC+AGG 0.506353 3_4:-57696267 Msa0509290:CDS
AAGCAGTATTGAATGGATCA+TGG 0.507736 3_4:-57696299 Msa0509290:CDS
GTGGCTGGGTATATTACCTT+GGG 0.508304 3_4:-57703428 Msa0509290:CDS
AAAATGGAAGATTCCTGTGC+CGG 0.511195 3_4:-57693118 Msa0509290:CDS
TATTGATGAGGAGAAGATGC+AGG 0.512826 3_4:-57692536 Msa0509290:CDS
AAGCCATCACATGAAGTTGA+AGG 0.513509 3_4:-57695192 Msa0509290:CDS
AAGAAAAGAAATGATGAGAA+AGG 0.514012 3_4:+57693227 None:intergenic
ACTTCATGTGATGGCTTTGG+TGG 0.514522 3_4:+57695198 None:intergenic
CAGATATTCGAATAAGATCA+AGG 0.515169 3_4:-57696191 Msa0509290:CDS
CTTCAACATAATACTTGTGA+AGG 0.515406 3_4:-57695552 Msa0509290:CDS
TCAATCAATGCTTGTGCTGA+AGG 0.515842 3_4:-57691962 Msa0509290:CDS
AACACAGCCACCACTTGAGT+TGG 0.516402 3_4:+57693278 None:intergenic
GAAGAACTACTTGGAAAGAG+TGG 0.517977 3_4:-57691778 Msa0509290:CDS
AGGTTGTGTTGTTGAGAAGT+TGG 0.518892 3_4:-57695124 Msa0509290:CDS
CGGCCATGGATAAGATAAAC+CGG 0.521874 3_4:+57693099 None:intergenic
TTCACAACATTTATAAGCCA+AGG 0.522728 3_4:+57695306 None:intergenic
AACTCTATTAAGAATCTCAC+AGG 0.523720 3_4:+57692118 None:intergenic
CATGGCCGTCGAACCTCCCC+AGG 0.526398 3_4:-57693084 Msa0509290:CDS
CCATGGATGTATTGATCCGA+GGG 0.527482 3_4:+57692315 None:intergenic
AAGCCTTCAACTTCATGTGA+TGG 0.530172 3_4:+57695189 None:intergenic
ACATGTTTGACATCACTAGA+AGG 0.531328 3_4:+57693012 None:intergenic
TTGTGAACATGATTATAGAT+TGG 0.534056 3_4:-57693991 Msa0509290:CDS
TTCCACTTGTCATTTACAGT+AGG 0.536954 3_4:+57694493 None:intergenic
AGATGATATACTTAGGGAGA+TGG 0.537029 3_4:-57691687 Msa0509290:CDS
GTTGTTGAGAAGTTGGAAGT+TGG 0.537957 3_4:-57695117 Msa0509290:CDS
AGTGGCTGGGTATATTACCT+TGG 0.539577 3_4:-57703429 Msa0509290:CDS
CTCTTCTTCAGATTCAGAAG+AGG 0.540428 3_4:-57695040 Msa0509290:CDS
GTTATTGACCACCGGGTCGA+TGG 0.541841 3_4:-57691816 Msa0509290:CDS
ATCCTAGAAGCACTAAATCA+AGG 0.543534 3_4:-57692813 Msa0509290:CDS
AGCTAGACTTGTTTGAAAGA+GGG 0.545005 3_4:-57692039 Msa0509290:CDS
TGTGTTATATCACATGCTCC+TGG 0.545385 3_4:-57693261 Msa0509290:CDS
GGAATCTTGATACTTGATGA+AGG 0.550715 3_4:-57692841 Msa0509290:CDS
CTCTATGGAACCATCACTCA+TGG 0.552151 3_4:-57693310 Msa0509290:CDS
TACAATCTCATGTTGTTCAT+CGG 0.552573 3_4:+57692402 None:intergenic
TTGAACCTGGGGAGGTTCGA+CGG 0.553335 3_4:+57693079 None:intergenic
AATTCCGGGTCGTAAGAAGC+TGG 0.554976 3_4:+57696146 None:intergenic
TCTTCAGATTCAGAAGAGGA+TGG 0.556076 3_4:-57695036 Msa0509290:CDS
TGGATAAGATAAACCGGCAC+AGG 0.556571 3_4:+57693105 None:intergenic
AGCCTACTGTAAATGACAAG+TGG 0.559328 3_4:-57694495 Msa0509290:CDS
AATGTATATATTTGTAAACC+AGG 0.562154 3_4:+57692439 None:intergenic
ATAAGTATAGAAGAACTACT+TGG 0.563508 3_4:-57691787 Msa0509290:CDS
ACCATGGATGTATTGATCCG+AGG 0.564240 3_4:+57692314 None:intergenic
CCCTCGGATCAATACATCCA+TGG 0.564663 3_4:-57692315 Msa0509290:CDS
TTGGGACAGAGATGAAGCAC+TGG 0.567036 3_4:-57703410 Msa0509290:CDS
AAGAACTACTTGGAAAGAGT+GGG 0.567137 3_4:-57691777 Msa0509290:CDS
ATTCAACGCTGATGCCTGCA+TGG 0.568999 3_4:-57694569 Msa0509290:CDS
TATGATGATCAAGGTTCACT+TGG 0.572239 3_4:-57695645 Msa0509290:CDS
AGAAGAGGATGGTGGTAAGA+GGG 0.572455 3_4:-57695025 Msa0509290:CDS
TGAAATTAAGCCTTATAGGT+GGG 0.572501 3_4:-57695505 Msa0509290:CDS
CCTATAAGGCTTAATTTCAG+AGG 0.573942 3_4:+57695509 None:intergenic
GATTCTAAATACAGAAGGAA+AGG 0.574058 3_4:-57692649 Msa0509290:CDS
TTTATTGATGTGTACGACAG+TGG 0.574824 3_4:-57692481 Msa0509290:CDS
GTGGAAGGAAACAAGCATGT+TGG 0.575605 3_4:-57694476 Msa0509290:CDS
CTTATCTTCCTCCATCGACC+CGG 0.577427 3_4:+57691805 None:intergenic
CATCAAGTATCAAGATTCCA+GGG 0.577717 3_4:+57692845 None:intergenic
GAGTACCAGTTACCCTCTTG+AGG 0.579454 3_4:-57692353 Msa0509290:CDS
TCACAATCTAGATTACTCGT+TGG 0.580048 3_4:-57695456 Msa0509290:CDS
ACTTAGGGAGATGGTTGAAG+AGG 0.582988 3_4:-57691678 Msa0509290:CDS
CGTCGAACTTGAACCTGGGG+AGG 0.583803 3_4:+57693071 None:intergenic
TCGTAAGAAGCTGGAGCAGT+CGG 0.585001 3_4:+57696155 None:intergenic
GCTTGCGACGTTCGAAACGT+AGG 0.587148 3_4:-57695170 Msa0509290:CDS
GAAGCACTAAATCAAGGTTG+AGG 0.587727 3_4:-57692807 Msa0509290:CDS
ATTGTTCTGAAACAATGTGC+CGG 0.589502 3_4:+57692741 None:intergenic
TGATACCAAGAAAGAATCCA+AGG 0.593538 3_4:-57694018 Msa0509290:CDS
TGCTCCAGCTTCTTACGACC+CGG 0.594592 3_4:-57696150 Msa0509290:CDS
TAGCCCATGACAAGAACACT+AGG 0.596138 3_4:+57692949 None:intergenic
CTGAAATTAAGCCTTATAGG+TGG 0.602209 3_4:-57695506 Msa0509290:CDS
AGCATCGAAAAGCGATGACG+AGG 0.602778 3_4:-57694434 Msa0509290:CDS
TTGACATCACTAGAAGGTCG+TGG 0.605241 3_4:+57693018 None:intergenic
GAGGAAGAGACTTCATGTTG+TGG 0.605764 3_4:-57694725 Msa0509290:CDS
GAAAGAACGTCATTTGCTTG+AGG 0.606173 3_4:-57692611 Msa0509290:CDS
AAGCACTGGGAGGCTGTATG+GGG 0.606380 3_4:-57703396 Msa0509290:intron
AGTTAGATTCTAAATACAGA+AGG 0.607419 3_4:-57692654 Msa0509290:CDS
AAAGCATTGAGAGAAAGCCC+TGG 0.610887 3_4:-57692862 Msa0509290:CDS
ATTCGCACACAGAAAATACA+TGG 0.611483 3_4:-57692887 Msa0509290:CDS
CTGATGATTTGGATGCCTTG+TGG 0.612273 3_4:-57694402 Msa0509290:CDS
TACTGTAAATGACAAGTGGA+AGG 0.615462 3_4:-57694491 Msa0509290:CDS
GGAATATACTGTCTTCGATG+TGG 0.617949 3_4:-57693957 Msa0509290:CDS
TGTATTCATTTCTTCCCACA+AGG 0.620617 3_4:+57694387 None:intergenic
TGTATCAGTTATTGACCACC+GGG 0.621006 3_4:-57691823 Msa0509290:CDS
GAATTGAGAATATTACTCTC+CGG 0.621894 3_4:-57692760 Msa0509290:CDS
ATTGACCACCGGGTCGATGG+AGG 0.625349 3_4:-57691813 Msa0509290:CDS
TCTAAATACAGAAGGAAAGG+CGG 0.627794 3_4:-57692646 Msa0509290:CDS
AGTGCTTCATCTCTGTCCCA+AGG 0.631379 3_4:+57703412 None:intergenic
TCAAGGTTCACTTGGTACAG+AGG 0.634309 3_4:-57695637 Msa0509290:CDS
GAATGGATCATGGCAACATG+TGG 0.640947 3_4:-57696289 Msa0509290:CDS
GATGTGTTGAATTTGGAGTA+CGG 0.641704 3_4:-57694838 Msa0509290:CDS
ATCTTCCTCCATCGACCCGG+TGG 0.645340 3_4:+57691808 None:intergenic
TGTCGTCGAACTTGAACCTG+GGG 0.645719 3_4:+57693068 None:intergenic
AATTAACTCAGATATTGATG+AGG 0.647649 3_4:-57692548 Msa0509290:CDS
TGGGACAGAGATGAAGCACT+GGG 0.648921 3_4:-57703409 Msa0509290:CDS
AAATTTGAAGATCAAAGCAG+CGG 0.654526 3_4:-57692004 Msa0509290:CDS
ATTGATGAGGAGAAGATGCA+GGG 0.655538 3_4:-57692535 Msa0509290:CDS
GTCTTGGCAAGATACAGAAG+TGG 0.663388 3_4:-57692981 Msa0509290:CDS
TCAAAAGCTCAACCTCAAGA+GGG 0.663408 3_4:+57692341 None:intergenic
TCAGATTCAGAAGAGGATGG+TGG 0.664458 3_4:-57695033 Msa0509290:CDS
TTATCTTCTTGATGGAACTG+CGG 0.671963 3_4:-57694350 Msa0509290:intron
AAGCTATTAATGTGAACACA+AGG 0.677127 3_4:-57694972 Msa0509290:CDS
GAACATTGATCAGATTTGTG+AGG 0.682243 3_4:+57695690 None:intergenic
TCTGCAGGAGCTCTATATCG+AGG 0.689607 3_4:-57703466 Msa0509290:CDS
GAAGAACAAGATCATAAAGG+CGG 0.691605 3_4:-57694598 Msa0509290:CDS
AGCCCATGACAAGAACACTA+GGG 0.709112 3_4:+57692950 None:intergenic
GTACAGCCTGAACGTTACGT+AGG 0.720601 3_4:-57695144 Msa0509290:CDS
GACAGAGATGAAGCACTGGG+AGG 0.732631 3_4:-57703406 Msa0509290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr3_4:57692090-57692109 Msa0509290:CDS 0.0%
!!! CATTTTTAGAATTTTTTTTA+AGG - chr3_4:57692200-57692219 Msa0509290:CDS 10.0%
!!! TTTTTAATTACAAGATAAAA+AGG - chr3_4:57692733-57692752 Msa0509290:CDS 10.0%
!!! ATTATTAAAGTTTTTTTTGT+TGG + chr3_4:57696408-57696427 None:intergenic 10.0%
!!! AAATATAAATAGAATTTTGA+CGG - chr3_4:57696598-57696617 Msa0509290:intron 10.0%
!!! GTATTTGTTTTTTTTTTTTA+AGG - chr3_4:57696975-57696994 Msa0509290:intron 10.0%
!! TTAAAAAAATATATAAGACT+TGG - chr3_4:57697044-57697063 Msa0509290:intron 10.0%
!!! TATGATTTTTTTTTTTATGT+GGG + chr3_4:57697296-57697315 None:intergenic 10.0%
!!! TTAAATATTTTTGAATTCAA+TGG - chr3_4:57697845-57697864 Msa0509290:intron 10.0%
!! CATATATAGTAATAAAATTA+AGG + chr3_4:57697944-57697963 None:intergenic 10.0%
!!! TAATTTTTTTAAGCAAAAAT+TGG + chr3_4:57698488-57698507 None:intergenic 10.0%
!! TCTATATATTATTAATGAAT+GGG + chr3_4:57698728-57698747 None:intergenic 10.0%
!! ATCTATATATTATTAATGAA+TGG + chr3_4:57698729-57698748 None:intergenic 10.0%
!! CTTAATTTATATATAATGAT+AGG - chr3_4:57701522-57701541 Msa0509290:intron 10.0%
!!! ATAATCTGAAATGTATTTAA+CGG - chr3_4:57691926-57691945 Msa0509290:CDS 15.0%
!! AAATCGGATTATATATAATT+TGG - chr3_4:57692035-57692054 Msa0509290:CDS 15.0%
!! AATCGGATTATATATAATTT+GGG - chr3_4:57692036-57692055 Msa0509290:CDS 15.0%
!! AGAAATAAATGATTAAATGA+TGG - chr3_4:57692460-57692479 Msa0509290:CDS 15.0%
!! GAAATAAATGATTAAATGAT+GGG - chr3_4:57692461-57692480 Msa0509290:CDS 15.0%
!! ATTGTAAAATGCAAATAAAA+TGG - chr3_4:57692710-57692729 Msa0509290:CDS 15.0%
!!! AAGTTTTTCTTTTATAGATA+TGG - chr3_4:57693573-57693592 Msa0509290:intron 15.0%
!!! AAGTTTTTCTTTTATAGATA+TGG - chr3_4:57693573-57693592 Msa0509290:intron 15.0%
!! AGAATAAATCTAAAAAAAAC+TGG + chr3_4:57694779-57694798 None:intergenic 15.0%
!!! AAGTTTTTCTTTTATAGATA+TGG - chr3_4:57693573-57693592 Msa0509290:intron 15.0%
!! GAATAAATCTAAAAAAAAAC+TGG + chr3_4:57695594-57695613 None:intergenic 15.0%
!!! TTTTTGTTATTGATTCATAT+TGG + chr3_4:57696054-57696073 None:intergenic 15.0%
!!! TAAAGAATAATTGCTTATTT+TGG + chr3_4:57696135-57696154 None:intergenic 15.0%
!!! TTAATTTTCCATTTCTATAA+GGG + chr3_4:57696265-57696284 None:intergenic 15.0%
!!! ATTAATTTTCCATTTCTATA+AGG + chr3_4:57696266-57696285 None:intergenic 15.0%
!!! GATTATTACCAATTTTTTAA+AGG - chr3_4:57696339-57696358 Msa0509290:intron 15.0%
!!! GTATTATACCTTTAAAAAAT+TGG + chr3_4:57696350-57696369 None:intergenic 15.0%
!!! ACTTCAAAATATTTCTATAT+TGG + chr3_4:57696460-57696479 None:intergenic 15.0%
!!! AATTTTCATTTATTCTAGAA+TGG + chr3_4:57696916-57696935 None:intergenic 15.0%
!!! TGCAATTGTTATTTTTTTTT+TGG - chr3_4:57697073-57697092 Msa0509290:intron 15.0%
!!! GCAATTGTTATTTTTTTTTT+GGG - chr3_4:57697074-57697093 Msa0509290:intron 15.0%
!!! GTGTAACTTTTTTTTTTTTT+TGG - chr3_4:57697243-57697262 Msa0509290:intron 15.0%
!!! CTATGATTTTTTTTTTTATG+TGG + chr3_4:57697297-57697316 None:intergenic 15.0%
!! CACATAAAAAAAAAAATCAT+AGG - chr3_4:57697295-57697314 Msa0509290:intron 15.0%
!!! TTTGTATTTTGTATTTTTTG+AGG - chr3_4:57697326-57697345 Msa0509290:intron 15.0%
!!! TTTTTTGTTTGAAATAAATG+AGG - chr3_4:57697367-57697386 Msa0509290:intron 15.0%
!! AAAATATGAATAATCATCAA+TGG - chr3_4:57697990-57698009 Msa0509290:intron 15.0%
!!! TACACTTATTATTAATTTGA+TGG - chr3_4:57698181-57698200 Msa0509290:intron 15.0%
!! TGATCTAATTAAATATTTGT+TGG - chr3_4:57698337-57698356 Msa0509290:intron 15.0%
!!! AATTACATCTTTTTTAAAGA+AGG - chr3_4:57699693-57699712 Msa0509290:intron 15.0%
!! ATTAGTCAAATAATGATATT+TGG + chr3_4:57700208-57700227 None:intergenic 15.0%
!!! TTTTAAACTTTTTACACTAA+CGG + chr3_4:57700831-57700850 None:intergenic 15.0%
!!! TTTTTTATTTGACTTACAAA+TGG + chr3_4:57701199-57701218 None:intergenic 15.0%
!! AATTTATATATAATGATAGG+CGG - chr3_4:57701525-57701544 Msa0509290:intron 15.0%
!! TTCTTAAAAAAATCGCAAAT+CGG - chr3_4:57692019-57692038 Msa0509290:CDS 20.0%
!! ATATATATATATGAGGACTT+CGG + chr3_4:57692081-57692100 None:intergenic 20.0%
!! GATCATATGTATAAAATAGA+GGG - chr3_4:57692646-57692665 Msa0509290:CDS 20.0%
!! ATCATATGTATAAAATAGAG+GGG - chr3_4:57692647-57692666 Msa0509290:CDS 20.0%
!! TAGATCAAATTCAATAACTA+GGG - chr3_4:57693017-57693036 Msa0509290:CDS 20.0%
!! TTAGATCATATTCAATAACT+AGG - chr3_4:57693141-57693160 Msa0509290:CDS 20.0%
!! TAGATCATATTCAATAACTA+GGG - chr3_4:57693142-57693161 Msa0509290:CDS 20.0%
!!! AATTACTATATGATTTGGTT+TGG + chr3_4:57693357-57693376 None:intergenic 20.0%
!! AATGCAATTACTATATGATT+TGG + chr3_4:57693362-57693381 None:intergenic 20.0%
!!! TAAAGTGAATCATAATCTTT+TGG + chr3_4:57693486-57693505 None:intergenic 20.0%
!!! TTTTAATTCTCGAAAAAATG+TGG + chr3_4:57693766-57693785 None:intergenic 20.0%
!!! TTGTAGAAGGTATTATATTT+AGG + chr3_4:57693829-57693848 None:intergenic 20.0%
!! TGTATCTAAAAATTTGTAGA+AGG + chr3_4:57693842-57693861 None:intergenic 20.0%
!! CAAATGGATAGTATTAATAA+GGG + chr3_4:57693886-57693905 None:intergenic 20.0%
!! ACAAATGGATAGTATTAATA+AGG + chr3_4:57693887-57693906 None:intergenic 20.0%
!!! TTTTCATATTTCAAGACAAA+TGG + chr3_4:57693902-57693921 None:intergenic 20.0%
!! TAAATATATCTAATACTCGA+AGG - chr3_4:57693930-57693949 Msa0509290:CDS 20.0%
!! AAATATATCTAATACTCGAA+GGG - chr3_4:57693931-57693950 Msa0509290:CDS 20.0%
!! TGTTATAAGGTTCTATAAAA+CGG - chr3_4:57694020-57694039 Msa0509290:CDS 20.0%
!! GTAATAAATTAGCTAATGAT+TGG - chr3_4:57694060-57694079 Msa0509290:intron 20.0%
!!! AAATTGATTTTACAAGTTGT+AGG - chr3_4:57694102-57694121 Msa0509290:intron 20.0%
!!! TTTTAATTCTCGAAAAAATG+TGG + chr3_4:57693766-57693785 None:intergenic 20.0%
!!! GCTTTTTATTAGAGTTTTTA+AGG + chr3_4:57694607-57694626 None:intergenic 20.0%
!! TGTTATAAGGTTCTATAAAA+CGG - chr3_4:57694020-57694039 Msa0509290:CDS 20.0%
!! GTAATAAATTAGCTAATGAT+TGG - chr3_4:57694060-57694079 Msa0509290:intron 20.0%
!!! AAATTGATTTTACAAGTTGT+AGG - chr3_4:57694102-57694121 Msa0509290:intron 20.0%
!!! TTTTAATTCTCGAAAAAATG+TGG + chr3_4:57693766-57693785 None:intergenic 20.0%
!!! GCTTTTTATTAGAGTTTTTA+AGG + chr3_4:57694607-57694626 None:intergenic 20.0%
!! TAATCAATACAAGACAAAAT+TGG + chr3_4:57695852-57695871 None:intergenic 20.0%
!! TATTTATATTTATAGGGTCA+TGG + chr3_4:57696589-57696608 None:intergenic 20.0%
!!! TTTTTTTTCTTCAGATTTTG+AGG + chr3_4:57696652-57696671 None:intergenic 20.0%
!! ACATTACATAAGATATGTAA+GGG - chr3_4:57696796-57696815 Msa0509290:intron 20.0%
!!! TATTTTTGCAACTTAATTAG+CGG - chr3_4:57697428-57697447 Msa0509290:intron 20.0%
!!! GATTTTAAGTCTTCTTTTTT+TGG - chr3_4:57697477-57697496 Msa0509290:intron 20.0%
!! TTTATAGAAACAGTTATCTT+TGG - chr3_4:57697704-57697723 Msa0509290:intron 20.0%
!! AGGAAAAATAACAAAAATGT+GGG + chr3_4:57698390-57698409 None:intergenic 20.0%
!! AAGGAAAAATAACAAAAATG+TGG + chr3_4:57698391-57698410 None:intergenic 20.0%
!!! TTGTTATTTTTCCTTTTACT+TGG - chr3_4:57698396-57698415 Msa0509290:intron 20.0%
!! AATACAATAAATGTCAAGAT+TGG + chr3_4:57698512-57698531 None:intergenic 20.0%
!! ATTGATATATCTATGCTATT+AGG - chr3_4:57698970-57698989 Msa0509290:intron 20.0%
!! AATAAAAAGTTTGAACTTAC+TGG + chr3_4:57699036-57699055 None:intergenic 20.0%
!!! GATGTATTTTATGATTATGA+TGG - chr3_4:57699859-57699878 Msa0509290:intron 20.0%
!!! TGTAAAAAGTTTAAAACTGT+CGG - chr3_4:57700835-57700854 Msa0509290:intron 20.0%
!!! TTTAAAGTCACATATACAAT+TGG + chr3_4:57700871-57700890 None:intergenic 20.0%
!!! TGTTTTTATCTTCTTTTATG+AGG - chr3_4:57701002-57701021 Msa0509290:intron 20.0%
!! TTAACTGTATTCTCTTTATT+TGG - chr3_4:57701452-57701471 Msa0509290:intron 20.0%
!!! AAAAAGCTTTTGAATTTCTT+TGG - chr3_4:57701749-57701768 Msa0509290:intron 20.0%
!! AATGTATATATTTGTAAACC+AGG + chr3_4:57702660-57702679 None:intergenic 20.0%
!!! TATTTGAGAAATATTTTCAG+TGG - chr3_4:57703000-57703019 Msa0509290:intron 20.0%
! GATTATATATAATTTGGGTG+TGG - chr3_4:57692041-57692060 Msa0509290:CDS 25.0%
!!! TTTGAAAAAGTTTGTTGAGT+AGG - chr3_4:57692228-57692247 Msa0509290:CDS 25.0%
! ATCATACAATCTTTCTCATT+AGG - chr3_4:57692296-57692315 Msa0509290:CDS 25.0%
! CTTTGTATGTTGAAAAGTAA+GGG + chr3_4:57692356-57692375 None:intergenic 25.0%
! AAATGCATAGAAATCGAATT+AGG + chr3_4:57692513-57692532 None:intergenic 25.0%
! GGATCATATGTATAAAATAG+AGG - chr3_4:57692645-57692664 Msa0509290:CDS 25.0%
!!! GTAATCGTTGAAAGTTTTAA+TGG - chr3_4:57692922-57692941 Msa0509290:CDS 25.0%
! CTAGATCAAATTCAATAACT+AGG - chr3_4:57693016-57693035 Msa0509290:CDS 25.0%
!!! AATATCTAAAGTGACTTGTT+AGG - chr3_4:57693105-57693124 Msa0509290:CDS 25.0%
! AAATAATTGTGAATAGCACT+GGG - chr3_4:57693229-57693248 Msa0509290:CDS 25.0%
! AAGCTAATTTACCTCTTATT+AGG + chr3_4:57693441-57693460 None:intergenic 25.0%
!! TATTCTAACAATTTTTCACG+TGG - chr3_4:57693993-57694012 Msa0509290:CDS 25.0%
! GTTATAAGGTTCTATAAAAC+GGG - chr3_4:57694021-57694040 Msa0509290:CDS 25.0%
!! CTAATGATTGGATTCAATTT+TGG - chr3_4:57694072-57694091 Msa0509290:intron 25.0%
!! TCATGTTTTCGATGATTTAA+AGG - chr3_4:57694135-57694154 Msa0509290:intron 25.0%
!! TTTGGATTAGATAATCTGAA+TGG + chr3_4:57694699-57694718 None:intergenic 25.0%
!!! AACTGTGTTTTTCAAACTTT+TGG + chr3_4:57694717-57694736 None:intergenic 25.0%
! TAATCAGAACCATGTATTTA+TGG - chr3_4:57694746-57694765 Msa0509290:CDS 25.0%
!! TATTCTAACAATTTTTCACG+TGG - chr3_4:57693993-57694012 Msa0509290:CDS 25.0%
! GTTATAAGGTTCTATAAAAC+GGG - chr3_4:57694021-57694040 Msa0509290:CDS 25.0%
!! CTAATGATTGGATTCAATTT+TGG - chr3_4:57694072-57694091 Msa0509290:intron 25.0%
!! TCATGTTTTCGATGATTTAA+AGG - chr3_4:57694135-57694154 Msa0509290:intron 25.0%
!! TTTGGATTAGATAATCTGAA+TGG + chr3_4:57694699-57694718 None:intergenic 25.0%
!!! AACTGTGTTTTTCAAACTTT+TGG + chr3_4:57694717-57694736 None:intergenic 25.0%
! TAATCAGAACCATGTATTTA+TGG - chr3_4:57694746-57694765 Msa0509290:CDS 25.0%
!! TCGTGAAGTAAACTTTTTAT+AGG + chr3_4:57695891-57695910 None:intergenic 25.0%
! AATATGTGTATTCAATGCAT+TGG + chr3_4:57696181-57696200 None:intergenic 25.0%
! GACATTACATAAGATATGTA+AGG - chr3_4:57696795-57696814 Msa0509290:intron 25.0%
! TGCAAAAATATTGCAAAGAT+CGG + chr3_4:57697418-57697437 None:intergenic 25.0%
! TTACGATAATTAGCATCAAA+TGG + chr3_4:57697906-57697925 None:intergenic 25.0%
! TTAATCTAACAATCTATAGC+CGG + chr3_4:57698105-57698124 None:intergenic 25.0%
!!! AGCTTTGTTAATTCACAATT+TGG + chr3_4:57698223-57698242 None:intergenic 25.0%
! AAAAATCATCTCCAAGTAAA+AGG + chr3_4:57698410-57698429 None:intergenic 25.0%
!!! TGTTTTGAAACAAGAATTAG+AGG + chr3_4:57698770-57698789 None:intergenic 25.0%
! TTCAGTATCAATGAAATGTA+AGG + chr3_4:57698863-57698882 None:intergenic 25.0%
! TAGCATAGATATATCAATTC+CGG + chr3_4:57698968-57698987 None:intergenic 25.0%
! AACTTCATTTCTTAGTAAAC+TGG - chr3_4:57699057-57699076 Msa0509290:intron 25.0%
! GATAATCCAAGTTCAAATTA+TGG + chr3_4:57699225-57699244 None:intergenic 25.0%
! CAAATGTGATTTATTTCAAG+TGG + chr3_4:57699276-57699295 None:intergenic 25.0%
!! CTTTTTGTAAATTGTAGATG+TGG - chr3_4:57699350-57699369 Msa0509290:intron 25.0%
! GTAAACTTATATGATGATCA+AGG - chr3_4:57699442-57699461 Msa0509290:intron 25.0%
! TGCATTAACCTCTTTATTAA+GGG + chr3_4:57699491-57699510 None:intergenic 25.0%
! TTGCATTAACCTCTTTATTA+AGG + chr3_4:57699492-57699511 None:intergenic 25.0%
! AAGATTGTGTATCAAGTTAT+GGG - chr3_4:57699745-57699764 Msa0509290:intron 25.0%
! ACATCAAATTGAGAAACAAT+AGG + chr3_4:57699844-57699863 None:intergenic 25.0%
! ATATAAGTTGTTCTCTTGTA+GGG + chr3_4:57700021-57700040 None:intergenic 25.0%
!! TCTTTAAAGAGAAGATTAAG+AGG - chr3_4:57700352-57700371 Msa0509290:intron 25.0%
!!! ATATGGATTTTGAAACCAAA+TGG - chr3_4:57700397-57700416 Msa0509290:intron 25.0%
!!! TATGGATTTTGAAACCAAAT+GGG - chr3_4:57700398-57700417 Msa0509290:intron 25.0%
! AATGATGTGACAATTATGAT+TGG - chr3_4:57700920-57700939 Msa0509290:intron 25.0%
! TTGTGAACATGATTATAGAT+TGG - chr3_4:57701105-57701124 Msa0509290:intron 25.0%
! TATAGATTGGATGAAGAAAT+TGG - chr3_4:57701118-57701137 Msa0509290:intron 25.0%
!!! TTGTCGATTTCATTAATCAA+TGG + chr3_4:57701679-57701698 None:intergenic 25.0%
!!! GAAATTCAAAAGCTTTTTTC+TGG + chr3_4:57701747-57701766 None:intergenic 25.0%
! AAGAAAAGAAATGATGAGAA+AGG + chr3_4:57701872-57701891 None:intergenic 25.0%
! AGTAATATTCTCAATTCTGT+TGG + chr3_4:57702333-57702352 None:intergenic 25.0%
!! ACATTGTTTCAGAACAATTT+TGG - chr3_4:57702360-57702379 Msa0509290:intron 25.0%
! AGAACTTCATGAACAAATTT+CGG + chr3_4:57702417-57702436 None:intergenic 25.0%
! AGTTAGATTCTAAATACAGA+AGG - chr3_4:57702442-57702461 Msa0509290:intron 25.0%
! AATTAACTCAGATATTGATG+AGG - chr3_4:57702548-57702567 Msa0509290:intron 25.0%
!!! AGCAAATTTGATTTGAGAAA+AGG - chr3_4:57702873-57702892 Msa0509290:intron 25.0%
!! AAATATTTTCAGTGGCAAAA+TGG - chr3_4:57703008-57703027 Msa0509290:intron 25.0%
! ATAAGTATAGAAGAACTACT+TGG - chr3_4:57703309-57703328 Msa0509290:intron 25.0%
! AGATTGAAGATGATATACTT+AGG - chr3_4:57703402-57703421 Msa0509290:CDS 25.0%
! GATTGAAGATGATATACTTA+GGG - chr3_4:57703403-57703422 Msa0509290:CDS 25.0%
! CATGATTATGAAGAATGAAA+AGG - chr3_4:57703460-57703479 Msa0509290:CDS 25.0%
! CTTTGCTATATTCTACCTAA+CGG - chr3_4:57691862-57691881 Msa0509290:CDS 30.0%
TATATATGGACAATGCATCT+AGG - chr3_4:57692150-57692169 Msa0509290:CDS 30.0%
GCTTTGTATGTTGAAAAGTA+AGG + chr3_4:57692357-57692376 None:intergenic 30.0%
ACATATAATTCGTATCCACA+CGG - chr3_4:57692588-57692607 Msa0509290:CDS 30.0%
TGAAAATAAAACAATCCGTG+TGG + chr3_4:57692606-57692625 None:intergenic 30.0%
CAACTTAGCAATGACATTAT+TGG - chr3_4:57692624-57692643 Msa0509290:CDS 30.0%
TTTAGAGATAGAGGATTGTT+AGG + chr3_4:57692970-57692989 None:intergenic 30.0%
!! TATCTCTAAAGTGACATGTT+AGG - chr3_4:57692980-57692999 Msa0509290:CDS 30.0%
CAAATAATTGTGAATAGCAC+TGG - chr3_4:57693228-57693247 Msa0509290:CDS 30.0%
!! CTATATGATTTGGTTTGGTT+CGG + chr3_4:57693352-57693371 None:intergenic 30.0%
ACAGAGTTAATACAATCACA+TGG - chr3_4:57693384-57693403 Msa0509290:CDS 30.0%
! TTCATCTAAGACCTAATAAG+AGG - chr3_4:57693427-57693446 Msa0509290:CDS 30.0%
TCTTAAGCTGAGTTCAATTT+GGG + chr3_4:57693549-57693568 None:intergenic 30.0%
TTCTTAAGCTGAGTTCAATT+TGG + chr3_4:57693550-57693569 None:intergenic 30.0%
TGGAAAGGTTTCTTAGAATA+TGG + chr3_4:57693620-57693639 None:intergenic 30.0%
ATTAATGAGTAATCGTGGAA+AGG + chr3_4:57693635-57693654 None:intergenic 30.0%
!! TTCACGTGGTTTTTGTTATA+AGG - chr3_4:57694007-57694026 Msa0509290:CDS 30.0%
! TGATTGGATTCAATTTTGGA+AGG - chr3_4:57694076-57694095 Msa0509290:intron 30.0%
TGGAAAGGTTTCTTAGAATA+TGG + chr3_4:57693620-57693639 None:intergenic 30.0%
ATTAATGAGTAATCGTGGAA+AGG + chr3_4:57693635-57693654 None:intergenic 30.0%
ATAGGATTAATGAGTAATCG+TGG + chr3_4:57694363-57694382 None:intergenic 30.0%
ACTCATTAATCCTATGTGTT+TGG - chr3_4:57694368-57694387 Msa0509290:CDS 30.0%
!!! TTAAGGAGTTTTAGACTGTT+TGG + chr3_4:57694590-57694609 None:intergenic 30.0%
GGTATGTTTCCATAAATACA+TGG + chr3_4:57694758-57694777 None:intergenic 30.0%
!! TTCACGTGGTTTTTGTTATA+AGG - chr3_4:57694007-57694026 Msa0509290:CDS 30.0%
! TGATTGGATTCAATTTTGGA+AGG - chr3_4:57694076-57694095 Msa0509290:intron 30.0%
TGGAAAGGTTTCTTAGAATA+TGG + chr3_4:57693620-57693639 None:intergenic 30.0%
ATTAATGAGTAATCGTGGAA+AGG + chr3_4:57693635-57693654 None:intergenic 30.0%
ATAGGATTAATGAGTAATCG+TGG + chr3_4:57694363-57694382 None:intergenic 30.0%
ACTCATTAATCCTATGTGTT+TGG - chr3_4:57694368-57694387 Msa0509290:CDS 30.0%
!!! TTAAGGAGTTTTAGACTGTT+TGG + chr3_4:57694590-57694609 None:intergenic 30.0%
GGTATGTTTCCATAAATACA+TGG + chr3_4:57694758-57694777 None:intergenic 30.0%
TATTCGCACTGTTTCAAATA+TGG - chr3_4:57695609-57695628 Msa0509290:CDS 30.0%
! TGTGAAATCTCTTGTTTATG+TGG - chr3_4:57695684-57695703 Msa0509290:CDS 30.0%
TCAATACAAGACAAAATTGG+AGG + chr3_4:57695849-57695868 None:intergenic 30.0%
TTATAGGAGTAGACTATATG+TGG + chr3_4:57695875-57695894 None:intergenic 30.0%
TAGCATTTCCCTTATAGAAA+TGG - chr3_4:57696254-57696273 Msa0509290:CDS 30.0%
GTGAATAAATGGAGTCTATA+GGG + chr3_4:57696834-57696853 None:intergenic 30.0%
TCACTGTTAAGGTGAATAAA+TGG + chr3_4:57696845-57696864 None:intergenic 30.0%
TGGTTAGAAATTCACTGTTA+AGG + chr3_4:57696856-57696875 None:intergenic 30.0%
!!! TTTTTTTTTGGGTACAATGC+AGG - chr3_4:57697085-57697104 Msa0509290:intron 30.0%
! GACTTAAAATCCGTTGATTA+TGG + chr3_4:57697468-57697487 None:intergenic 30.0%
GTAAGTAATCTAGTTGACTA+TGG + chr3_4:57697536-57697555 None:intergenic 30.0%
GTAACAGTTTAAACATGAAC+TGG + chr3_4:57697629-57697648 None:intergenic 30.0%
ATTAGATTTGAGAACAAACG+AGG + chr3_4:57697678-57697697 None:intergenic 30.0%
!! GGTTTTTCACGACATTTTTT+TGG - chr3_4:57697725-57697744 Msa0509290:intron 30.0%
! TGATGCAAATGCCTTTTTAT+GGG + chr3_4:57697873-57697892 None:intergenic 30.0%
! TTGATGCAAATGCCTTTTTA+TGG + chr3_4:57697874-57697893 None:intergenic 30.0%
!! TAAAAAGGCATTTGCATCAA+TGG - chr3_4:57697874-57697893 Msa0509290:intron 30.0%
! ATCATTTGTTGCATTCATCA+TGG + chr3_4:57698061-57698080 None:intergenic 30.0%
! ATTGACCATGATTTTGAATG+TGG - chr3_4:57698558-57698577 Msa0509290:intron 30.0%
! TGTTCTAACTAGTTTCTACA+AGG + chr3_4:57698685-57698704 None:intergenic 30.0%
TGAATGGGAAAATGAAGTTA+TGG + chr3_4:57698713-57698732 None:intergenic 30.0%
CAGATATTCGAATAAGATCA+AGG - chr3_4:57698905-57698924 Msa0509290:intron 30.0%
AGCATAGATATATCAATTCC+GGG + chr3_4:57698967-57698986 None:intergenic 30.0%
CTTACTGGAATAGACATAAA+TGG + chr3_4:57699021-57699040 None:intergenic 30.0%
TTCTAGCCATAATTTGAACT+TGG - chr3_4:57699216-57699235 Msa0509290:intron 30.0%
TCAAGTGGTTAATTCAGTTA+AGG + chr3_4:57699261-57699280 None:intergenic 30.0%
GGTAAAAACCCTTAATAAAG+AGG - chr3_4:57699480-57699499 Msa0509290:intron 30.0%
! ATCAAATTTTCATCCTCCAA+AGG - chr3_4:57699521-57699540 Msa0509290:intron 30.0%
AAGTATTATGTTGAAGCCTT+TGG + chr3_4:57699540-57699559 None:intergenic 30.0%
CTTCAACATAATACTTGTGA+AGG - chr3_4:57699544-57699563 Msa0509290:intron 30.0%
! TGAAATTAAGCCTTATAGGT+GGG - chr3_4:57699591-57699610 Msa0509290:intron 30.0%
! AATTTTCATCTGATCTTTCG+TGG - chr3_4:57699665-57699684 Msa0509290:intron 30.0%
! TGTTTTGCACAGATCTTATA+TGG + chr3_4:57699726-57699745 None:intergenic 30.0%
CAAGATTGTGTATCAAGTTA+TGG - chr3_4:57699744-57699763 Msa0509290:intron 30.0%
AAACTGACATTATTAGTCCT+TGG - chr3_4:57699773-57699792 Msa0509290:intron 30.0%
TTCACAACATTTATAAGCCA+AGG + chr3_4:57699793-57699812 None:intergenic 30.0%
TGTGAACTTCAGCTTAAAAA+AGG - chr3_4:57699807-57699826 Msa0509290:intron 30.0%
CATATAAGTTGTTCTCTTGT+AGG + chr3_4:57700022-57700041 None:intergenic 30.0%
AAGCTATTAATGTGAACACA+AGG - chr3_4:57700124-57700143 Msa0509290:intron 30.0%
ACAAGGAACAAAAATTCTGA+CGG - chr3_4:57700141-57700160 Msa0509290:intron 30.0%
ATTTCTTGTGCAAAGAAGAA+TGG - chr3_4:57700231-57700250 Msa0509290:intron 30.0%
TCATCACTTGATATTGTTGT+AGG + chr3_4:57700291-57700310 None:intergenic 30.0%
!!! ATTTTGAAACCAAATGGGAA+GGG - chr3_4:57700403-57700422 Msa0509290:intron 30.0%
GAAGGGATACATTTCAAAAA+AGG - chr3_4:57700420-57700439 Msa0509290:intron 30.0%
CATGAAGAACAAGATCATAA+AGG - chr3_4:57700495-57700514 Msa0509290:intron 30.0%
ACTATCTATTATTTCCATGC+AGG + chr3_4:57700544-57700563 None:intergenic 30.0%
ACATCAAGTTATCTTCTTGA+TGG - chr3_4:57700738-57700757 Msa0509290:intron 30.0%
TGATTCAGTTCAAATATAGC+AGG - chr3_4:57701033-57701052 Msa0509290:intron 30.0%
GATTCAGTTCAAATATAGCA+GGG - chr3_4:57701034-57701053 Msa0509290:intron 30.0%
!! ATTTTAGTCCCTCATTTTGT+TGG - chr3_4:57701241-57701260 Msa0509290:intron 30.0%
CAACATATCCAACAAAATGA+GGG + chr3_4:57701252-57701271 None:intergenic 30.0%
ACAACATATCCAACAAAATG+AGG + chr3_4:57701253-57701272 None:intergenic 30.0%
TTAAATATCAGCAATAGCGT+AGG - chr3_4:57701285-57701304 Msa0509290:intron 30.0%
TACAAAATGCTGACATATAG+CGG - chr3_4:57701350-57701369 Msa0509290:intron 30.0%
GTTATCAGTTAGATTCATAC+CGG + chr3_4:57701503-57701522 None:intergenic 30.0%
TCATTAATCAATGGTTCATC+AGG + chr3_4:57701670-57701689 None:intergenic 30.0%
TTAATGAAATCGACAACGTT+TGG - chr3_4:57701683-57701702 Msa0509290:intron 30.0%
TAATGAAATCGACAACGTTT+GGG - chr3_4:57701684-57701703 Msa0509290:intron 30.0%
! GTTACTTGAAGTTATTTCCA+AGG - chr3_4:57701896-57701915 Msa0509290:intron 30.0%
! TAGTGATGTCAAACATGTTT+TGG - chr3_4:57702089-57702108 Msa0509290:intron 30.0%
!! AAACATGTTTTGGATTGTCT+TGG - chr3_4:57702099-57702118 Msa0509290:intron 30.0%
GAATTGAGAATATTACTCTC+CGG - chr3_4:57702336-57702355 Msa0509290:intron 30.0%
GATTCTAAATACAGAAGGAA+AGG - chr3_4:57702447-57702466 Msa0509290:intron 30.0%
TACAATCTCATGTTGTTCAT+CGG + chr3_4:57702697-57702716 None:intergenic 30.0%
ACAGAAACTTCAGAAGAAAA+TGG - chr3_4:57702716-57702735 Msa0509290:intron 30.0%
!!! ATGTGCAACTAAGTTTTTTG+CGG - chr3_4:57702824-57702843 Msa0509290:intron 30.0%
ACGAGTAGTGAAAAATGAAA+AGG - chr3_4:57702929-57702948 Msa0509290:intron 30.0%
AACTCTATTAAGAATCTCAC+AGG + chr3_4:57702981-57703000 None:intergenic 30.0%
AAAGAGATTATGGTACTAAC+AGG - chr3_4:57703032-57703051 Msa0509290:intron 30.0%
AAATTTGAAGATCAAAGCAG+CGG - chr3_4:57703092-57703111 Msa0509290:intron 30.0%
!!! ATAGCTTGCTTTGTTTTTGA+AGG + chr3_4:57703212-57703231 None:intergenic 30.0%
ACATACATACTGAATCCGTT+AGG + chr3_4:57691880-57691899 None:intergenic 35.0%
!! TGAAAAGTAAGGGTTTGTTG+TGG + chr3_4:57692346-57692365 None:intergenic 35.0%
CTCATAATTTCTCACGTATG+CGG + chr3_4:57692423-57692442 None:intergenic 35.0%
! TAGTTTTTCTCGAGAGGAAA+TGG - chr3_4:57692485-57692504 Msa0509290:CDS 35.0%
!!! TGTCACTTTGACGAGTTTTT+AGG + chr3_4:57692569-57692588 None:intergenic 35.0%
ATCCTATATTGCTCGTTGTT+TGG - chr3_4:57692772-57692791 Msa0509290:CDS 35.0%
TACCAAACAACGAGCAATAT+AGG + chr3_4:57692777-57692796 None:intergenic 35.0%
TGACTCAAAACCCTATTCTA+AGG - chr3_4:57692869-57692888 Msa0509290:CDS 35.0%
GGGATTGTAACCTTAGAATA+GGG + chr3_4:57692882-57692901 None:intergenic 35.0%
TTACAATCCCCTAATCTCTT+AGG - chr3_4:57692892-57692911 Msa0509290:CDS 35.0%
!! ACATGTCACTTTAGAGATAG+AGG + chr3_4:57692979-57692998 None:intergenic 35.0%
AATTCAATAACTAGGGCTAG+TGG - chr3_4:57693024-57693043 Msa0509290:CDS 35.0%
CATATTCAGTTCAAACGGTT+CGG + chr3_4:57693327-57693346 None:intergenic 35.0%
CGGTTCATATTCAGTTCAAA+CGG + chr3_4:57693332-57693351 None:intergenic 35.0%
GAAGGGTTATACTACATAGT+AGG + chr3_4:57693520-57693539 None:intergenic 35.0%
!! TTCAATTTGGGAGCTTTGAA+GGG + chr3_4:57693537-57693556 None:intergenic 35.0%
GTAGGATTAATGAGTAATCG+TGG + chr3_4:57693640-57693659 None:intergenic 35.0%
ACTCATTAATCCTACGTGTT+TGG - chr3_4:57693645-57693664 Msa0509290:intron 35.0%
AAAAAATGTGGCACAGTTTG+AGG + chr3_4:57693754-57693773 None:intergenic 35.0%
TAAAACGGGACAGATTACAT+AGG - chr3_4:57694035-57694054 Msa0509290:CDS 35.0%
AAAACGGGACAGATTACATA+GGG - chr3_4:57694036-57694055 Msa0509290:CDS 35.0%
ATTCTCGAAAAAATGTGGCA+CGG + chr3_4:57693761-57693780 None:intergenic 35.0%
TAAAACGGGACAGATTACAT+AGG - chr3_4:57694035-57694054 Msa0509290:CDS 35.0%
AAAACGGGACAGATTACATA+GGG - chr3_4:57694036-57694055 Msa0509290:CDS 35.0%
ATTCTCGAAAAAATGTGGCA+CGG + chr3_4:57693761-57693780 None:intergenic 35.0%
GTCACGATATCTTTAAATCG+TGG - chr3_4:57695332-57695351 Msa0509290:CDS 35.0%
GATATCTTTAAATCGTGGCA+CGG - chr3_4:57695337-57695356 Msa0509290:CDS 35.0%
ACAAGAGATTTCACAATGTG+AGG + chr3_4:57695679-57695698 None:intergenic 35.0%
TCATGCCATTGTACAAGTTT+AGG - chr3_4:57695736-57695755 Msa0509290:intron 35.0%
TGGAACCTAAACTTGTACAA+TGG + chr3_4:57695744-57695763 None:intergenic 35.0%
! AGTTTAGGTTCCACTATAGT+TGG - chr3_4:57695751-57695770 Msa0509290:intron 35.0%
! GTTTAGGTTCCACTATAGTT+GGG - chr3_4:57695752-57695771 Msa0509290:intron 35.0%
AAAAGGATTCCCAACTATAG+TGG + chr3_4:57695764-57695783 None:intergenic 35.0%
AAGTACACAAACCTCCTATA+TGG - chr3_4:57695964-57695983 Msa0509290:intron 35.0%
! TGTCATGAGAGTTGATTGAT+GGG + chr3_4:57696019-57696038 None:intergenic 35.0%
ACTCTCATGACACATATCTT+TGG - chr3_4:57696027-57696046 Msa0509290:intron 35.0%
! CACTCTTTAAGGATCATAAG+TGG + chr3_4:57696218-57696237 None:intergenic 35.0%
! CTGAGTTTAACTTACAAGGA+TGG + chr3_4:57696766-57696785 None:intergenic 35.0%
TAAGTTAAACTCAGCTGCTA+AGG - chr3_4:57696772-57696791 Msa0509290:intron 35.0%
AAGTTAAACTCAGCTGCTAA+GGG - chr3_4:57696773-57696792 Msa0509290:intron 35.0%
GGTGAATAAATGGAGTCTAT+AGG + chr3_4:57696835-57696854 None:intergenic 35.0%
TTTCTAACCACTAGACTACT+TGG - chr3_4:57696866-57696885 Msa0509290:intron 35.0%
TTCTAACCACTAGACTACTT+GGG - chr3_4:57696867-57696886 Msa0509290:intron 35.0%
! TTTTTACCCAAGTAGTCTAG+TGG + chr3_4:57696876-57696895 None:intergenic 35.0%
AAAAAAAATCATAGGCAGCG+AGG - chr3_4:57697303-57697322 Msa0509290:intron 35.0%
TGAAAGAGAAAGAAAGACAG+TGG + chr3_4:57697575-57697594 None:intergenic 35.0%
!!! CGACATTTTTTTGGTGCAAT+TGG - chr3_4:57697734-57697753 Msa0509290:intron 35.0%
AGACTTGAAATCTCTTCAAC+CGG - chr3_4:57698083-57698102 Msa0509290:intron 35.0%
GCTTATAAAGTTAGCTGCAA+AGG - chr3_4:57698142-57698161 Msa0509290:intron 35.0%
!! TATTTGTTGGTTTCCCTTCT+AGG - chr3_4:57698350-57698369 Msa0509290:intron 35.0%
! GCATTTGAAGCAGTATTGAA+TGG - chr3_4:57698790-57698809 Msa0509290:intron 35.0%
! AAGCAGTATTGAATGGATCA+TGG - chr3_4:57698797-57698816 Msa0509290:intron 35.0%
GAACTCTTGAAAATAGAGTC+AGG - chr3_4:57698829-57698848 Msa0509290:intron 35.0%
CAGTTAAGGACAAATCATTC+AGG + chr3_4:57699247-57699266 None:intergenic 35.0%
TAAATATCAAGCCAAGTGCT+TGG + chr3_4:57699329-57699348 None:intergenic 35.0%
GAACATTGATCAGATTTGTG+AGG + chr3_4:57699409-57699428 None:intergenic 35.0%
TATGATGATCAAGGTTCACT+TGG - chr3_4:57699451-57699470 Msa0509290:intron 35.0%
TATTATGTTGAAGCCTTTGG+AGG + chr3_4:57699537-57699556 None:intergenic 35.0%
CCTATAAGGCTTAATTTCAG+AGG + chr3_4:57699590-57699609 None:intergenic 35.0%
!! CCTCTGAAATTAAGCCTTAT+AGG - chr3_4:57699587-57699606 Msa0509290:intron 35.0%
! CTGAAATTAAGCCTTATAGG+TGG - chr3_4:57699590-57699609 Msa0509290:intron 35.0%
TCACAATCTAGATTACTCGT+TGG - chr3_4:57699640-57699659 Msa0509290:intron 35.0%
CACAATCTAGATTACTCGTT+GGG - chr3_4:57699641-57699660 Msa0509290:intron 35.0%
AACAAAAATTCTGACGGTGA+TGG - chr3_4:57700147-57700166 Msa0509290:intron 35.0%
! GATGTGTTGAATTTGGAGTA+CGG - chr3_4:57700258-57700277 Msa0509290:intron 35.0%
TCAAGTGATGAAGAAGTTGA+TGG - chr3_4:57700300-57700319 Msa0509290:intron 35.0%
ACTTCATGTTGTGGATGATA+TGG - chr3_4:57700380-57700399 Msa0509290:intron 35.0%
!!! GATTTTGAAACCAAATGGGA+AGG - chr3_4:57700402-57700421 Msa0509290:intron 35.0%
! CTCGAATGAAAATTTTCTGC+TGG + chr3_4:57700450-57700469 None:intergenic 35.0%
GAAGAACAAGATCATAAAGG+CGG - chr3_4:57700498-57700517 Msa0509290:intron 35.0%
! TTCCACTTGTCATTTACAGT+AGG + chr3_4:57700606-57700625 None:intergenic 35.0%
TACTGTAAATGACAAGTGGA+AGG - chr3_4:57700605-57700624 Msa0509290:intron 35.0%
AACAAGCATGTTGGAGAAAA+AGG - chr3_4:57700629-57700648 Msa0509290:intron 35.0%
GGAAGAAAATCCTGATGATT+TGG - chr3_4:57700683-57700702 Msa0509290:intron 35.0%
TGTATTCATTTCTTCCCACA+AGG + chr3_4:57700712-57700731 None:intergenic 35.0%
TTATCTTCTTGATGGAACTG+CGG - chr3_4:57700746-57700765 Msa0509290:intron 35.0%
TGATACCAAGAAAGAATCCA+AGG - chr3_4:57701078-57701097 Msa0509290:intron 35.0%
ACTATCCTTGGATTCTTTCT+TGG + chr3_4:57701086-57701105 None:intergenic 35.0%
ATCATGTTCACAACTATCCT+TGG + chr3_4:57701098-57701117 None:intergenic 35.0%
! ATTTTGTCTATTGCTTGCTC+CGG - chr3_4:57701481-57701500 Msa0509290:intron 35.0%
! TCTCCTCTTTGTACCTTTTT+GGG + chr3_4:57701555-57701574 None:intergenic 35.0%
! TTCTCCTCTTTGTACCTTTT+TGG + chr3_4:57701556-57701575 None:intergenic 35.0%
ACAGTGCAGTGAAGAAAATA+AGG - chr3_4:57701576-57701595 Msa0509290:intron 35.0%
!! TGCATCTTTTCTTCAAGTTC+AGG + chr3_4:57701718-57701737 None:intergenic 35.0%
TTTCTTTGGCATAACATTGC+TGG - chr3_4:57701763-57701782 Msa0509290:intron 35.0%
! GATTTTTCTTCCATGAGTGA+TGG + chr3_4:57701799-57701818 None:intergenic 35.0%
GAAGAAAAATCCAACTCAAG+TGG - chr3_4:57701808-57701827 Msa0509290:intron 35.0%
GGCGAAAAGAGTTCAAAAAA+TGG - chr3_4:57701962-57701981 Msa0509290:intron 35.0%
GCAAAATCAATGATTCTTCC+TGG - chr3_4:57702051-57702070 Msa0509290:intron 35.0%
ACATGTTTGACATCACTAGA+AGG + chr3_4:57702087-57702106 None:intergenic 35.0%
ATTCGCACACAGAAAATACA+TGG - chr3_4:57702209-57702228 Msa0509290:intron 35.0%
CATCAAGTATCAAGATTCCA+GGG + chr3_4:57702254-57702273 None:intergenic 35.0%
TCATCAAGTATCAAGATTCC+AGG + chr3_4:57702255-57702274 None:intergenic 35.0%
GGAATCTTGATACTTGATGA+AGG - chr3_4:57702255-57702274 Msa0509290:intron 35.0%
!! ATCCTAGAAGCACTAAATCA+AGG - chr3_4:57702283-57702302 Msa0509290:intron 35.0%
AACCTTGATTTAGTGCTTCT+AGG + chr3_4:57702288-57702307 None:intergenic 35.0%
!! ATTGTTCTGAAACAATGTGC+CGG + chr3_4:57702358-57702377 None:intergenic 35.0%
TCTAAATACAGAAGGAAAGG+CGG - chr3_4:57702450-57702469 Msa0509290:intron 35.0%
GTCGTACACATCAATAAAAC+CGG + chr3_4:57702613-57702632 None:intergenic 35.0%
TTTATTGATGTGTACGACAG+TGG - chr3_4:57702615-57702634 Msa0509290:intron 35.0%
GCTCAGAACAAATCTTACTT+TGG + chr3_4:57702901-57702920 None:intergenic 35.0%
! TTTTCACTACTCGTGAGATT+AGG + chr3_4:57702923-57702942 None:intergenic 35.0%
GCAAAATGGCAAAGAGATTA+TGG - chr3_4:57703022-57703041 Msa0509290:intron 35.0%
! AGCTAGACTTGTTTGAAAGA+GGG - chr3_4:57703057-57703076 Msa0509290:intron 35.0%
!!! AGCTTCTAGAGTGATTTTTC+TGG - chr3_4:57703172-57703191 Msa0509290:intron 35.0%
! ACACATAAACCATTTTCTGC+TGG + chr3_4:57703256-57703275 None:intergenic 35.0%
AAGAACTACTTGGAAAGAGT+GGG - chr3_4:57703319-57703338 Msa0509290:intron 35.0%
!!! TTCGTGCATGATTTTTAGTG+AGG - chr3_4:57703343-57703362 Msa0509290:intron 35.0%
!!! GATTTTTAGTGAGGAGTTTG+TGG - chr3_4:57703352-57703371 Msa0509290:intron 35.0%
TTGTGGAAGATCCTTCTAAA+TGG - chr3_4:57703369-57703388 Msa0509290:intron 35.0%
AGATGATATACTTAGGGAGA+TGG - chr3_4:57703409-57703428 Msa0509290:CDS 35.0%
ATATGGACAATGCATCTAGG+AGG - chr3_4:57692153-57692172 Msa0509290:CDS 40.0%
TATGGACAATGCATCTAGGA+GGG - chr3_4:57692154-57692173 Msa0509290:CDS 40.0%
AAAAATGTTGTGCATGCACG+TGG + chr3_4:57692187-57692206 None:intergenic 40.0%
TATGATGTGTGTGAGTCAAG+TGG + chr3_4:57692282-57692301 None:intergenic 40.0%
AAGTGTGATGAGTGTAGTGT+GGG + chr3_4:57692322-57692341 None:intergenic 40.0%
!!! ATGGGTTAGTTTTTCTCGAG+AGG - chr3_4:57692479-57692498 Msa0509290:CDS 40.0%
TAAAATAGAGGGGTTGCACA+TGG - chr3_4:57692657-57692676 Msa0509290:CDS 40.0%
AAAATAGAGGGGTTGCACAT+GGG - chr3_4:57692658-57692677 Msa0509290:CDS 40.0%
GGGGATTGTAACCTTAGAAT+AGG + chr3_4:57692883-57692902 None:intergenic 40.0%
AGACTCACCTAAGAGATTAG+GGG + chr3_4:57692902-57692921 None:intergenic 40.0%
CAGACTCACCTAAGAGATTA+GGG + chr3_4:57692903-57692922 None:intergenic 40.0%
ACAGACTCACCTAAGAGATT+AGG + chr3_4:57692904-57692923 None:intergenic 40.0%
! GTTCAATTTGGGAGCTTTGA+AGG + chr3_4:57693538-57693557 None:intergenic 40.0%
TTGTGTCTCTTCTCCAATCA+TGG - chr3_4:57693720-57693739 Msa0509290:intron 40.0%
TGTCACGTTGCTGAAAATCT+TGG - chr3_4:57694391-57694410 Msa0509290:CDS 40.0%
! TTTTGTCTCTTCTCCAATCG+TGG - chr3_4:57694443-57694462 Msa0509290:CDS 40.0%
AAAAAATGTGGCACGGTTTG+AGG + chr3_4:57694477-57694496 None:intergenic 40.0%
TTATCTCCAAGATCGTGTCA+CGG - chr3_4:57694517-57694536 Msa0509290:CDS 40.0%
!! GTTTTAGACTGTTTGGAGGT+TGG + chr3_4:57694583-57694602 None:intergenic 40.0%
!!! AGGAGTTTTAGACTGTTTGG+AGG + chr3_4:57694587-57694606 None:intergenic 40.0%
TGTCACGTTGCTGAAAATCT+TGG - chr3_4:57694391-57694410 Msa0509290:CDS 40.0%
! TTTTGTCTCTTCTCCAATCG+TGG - chr3_4:57694443-57694462 Msa0509290:CDS 40.0%
AAAAAATGTGGCACGGTTTG+AGG + chr3_4:57694477-57694496 None:intergenic 40.0%
AAGATATCGTGACACGATCT+TGG + chr3_4:57695325-57695344 None:intergenic 40.0%
!! GTTTTAGACTGTTTGGAGGT+TGG + chr3_4:57694583-57694602 None:intergenic 40.0%
!!! AGGAGTTTTAGACTGTTTGG+AGG + chr3_4:57694587-57694606 None:intergenic 40.0%
GAATGGTACCAGTACAGATT+GGG + chr3_4:57695497-57695516 None:intergenic 40.0%
TGAATGGTACCAGTACAGAT+TGG + chr3_4:57695498-57695517 None:intergenic 40.0%
TGAGGTGCAAAAACATTGTG+GGG + chr3_4:57695661-57695680 None:intergenic 40.0%
GTGAGGTGCAAAAACATTGT+GGG + chr3_4:57695662-57695681 None:intergenic 40.0%
TGTGAGGTGCAAAAACATTG+TGG + chr3_4:57695663-57695682 None:intergenic 40.0%
!! CTCAACTTTGGCTTGTCAAA+AGG + chr3_4:57695781-57695800 None:intergenic 40.0%
! CTTTTGACAAGCCAAAGTTG+AGG - chr3_4:57695779-57695798 Msa0509290:intron 40.0%
TCGAATTTGGCATTTCCAGA+AGG + chr3_4:57695819-57695838 None:intergenic 40.0%
! TTCTGGAAATGCCAAATTCG+AGG - chr3_4:57695818-57695837 Msa0509290:intron 40.0%
! TGGAGGTATAACCTCGAATT+TGG + chr3_4:57695832-57695851 None:intergenic 40.0%
!! GTTGGTGGTTTGATCCATAT+AGG + chr3_4:57695981-57696000 None:intergenic 40.0%
!! TGATGGGTTGAAGAAGACAA+CGG + chr3_4:57696003-57696022 None:intergenic 40.0%
! GTGTCATGAGAGTTGATTGA+TGG + chr3_4:57696020-57696039 None:intergenic 40.0%
! GCAGCTGAGTTTAACTTACA+AGG + chr3_4:57696770-57696789 None:intergenic 40.0%
CTCTCAACGTCCATAATCAA+CGG - chr3_4:57697455-57697474 Msa0509290:intron 40.0%
AGAGAGAAAAAGAGTGAGAG+AGG + chr3_4:57697505-57697524 None:intergenic 40.0%
CAGTGGAAAACAAAGAGTGA+TGG + chr3_4:57697558-57697577 None:intergenic 40.0%
! TCTTTCATTTTGTTGCACCC+TGG - chr3_4:57697588-57697607 Msa0509290:intron 40.0%
GGAACATCAAATAGAGACCA+GGG + chr3_4:57697608-57697627 None:intergenic 40.0%
TGGAACATCAAATAGAGACC+AGG + chr3_4:57697609-57697628 None:intergenic 40.0%
AGATTTGAGAACAAACGAGG+TGG + chr3_4:57697675-57697694 None:intergenic 40.0%
TTTAACAGCTGATAGAGCAG+CGG + chr3_4:57697830-57697849 None:intergenic 40.0%
ATTCAATGGCGCCCATAAAA+AGG - chr3_4:57697859-57697878 Msa0509290:intron 40.0%
GACGTAAACCAAACCTAGAA+GGG + chr3_4:57698366-57698385 None:intergenic 40.0%
AGACGTAAACCAAACCTAGA+AGG + chr3_4:57698367-57698386 None:intergenic 40.0%
GCATGCCACATTCAAAATCA+TGG + chr3_4:57698566-57698585 None:intergenic 40.0%
CTAGACTTAACTTCGCTACT+GGG + chr3_4:57699186-57699205 None:intergenic 40.0%
ACTAGACTTAACTTCGCTAC+TGG + chr3_4:57699187-57699206 None:intergenic 40.0%
!! ATGTTGACTTACCAAGCACT+TGG - chr3_4:57699315-57699334 Msa0509290:intron 40.0%
TCTGATGAATCCCACCTATA+AGG + chr3_4:57699604-57699623 None:intergenic 40.0%
TCAACTTCATGTGATGGCTT+TGG + chr3_4:57699904-57699923 None:intergenic 40.0%
AAGCCATCACATGAAGTTGA+AGG - chr3_4:57699904-57699923 Msa0509290:intron 40.0%
AAGCCTTCAACTTCATGTGA+TGG + chr3_4:57699910-57699929 None:intergenic 40.0%
! AGGTTGTGTTGTTGAGAAGT+TGG - chr3_4:57699972-57699991 Msa0509290:intron 40.0%
GTTGTTGAGAAGTTGGAAGT+TGG - chr3_4:57699979-57699998 Msa0509290:intron 40.0%
CTCTTCTTCAGATTCAGAAG+AGG - chr3_4:57700056-57700075 Msa0509290:intron 40.0%
TCTTCAGATTCAGAAGAGGA+TGG - chr3_4:57700060-57700079 Msa0509290:intron 40.0%
!! TGGTGCTGATGTGTTGAATT+TGG - chr3_4:57700251-57700270 Msa0509290:intron 40.0%
GAAATGTATCCCTTCCCATT+TGG + chr3_4:57700415-57700434 None:intergenic 40.0%
AGCCTACTGTAAATGACAAG+TGG - chr3_4:57700601-57700620 Msa0509290:intron 40.0%
! TGATGATTTGGATGCCTTGT+GGG - chr3_4:57700695-57700714 Msa0509290:intron 40.0%
AGCGTACAAAGTCTTTACAC+TGG - chr3_4:57700948-57700967 Msa0509290:intron 40.0%
GGAATATACTGTCTTCGATG+TGG - chr3_4:57701139-57701158 Msa0509290:intron 40.0%
! ATGCCCAAAAAGGTACAAAG+AGG - chr3_4:57701549-57701568 Msa0509290:intron 40.0%
GAAAAATCCAACTCAAGTGG+TGG - chr3_4:57701811-57701830 Msa0509290:intron 40.0%
TGTGTTATATCACATGCTCC+TGG - chr3_4:57701835-57701854 Msa0509290:intron 40.0%
! CATGTGTAGAGTGTGGTTTT+TGG + chr3_4:57701943-57701962 None:intergenic 40.0%
CAAAAACCACACTCTACACA+TGG - chr3_4:57701941-57701960 Msa0509290:intron 40.0%
AAAATGGAAGATTCCTGTGC+CGG - chr3_4:57701978-57701997 Msa0509290:intron 40.0%
! GAAGCACTAAATCAAGGTTG+AGG - chr3_4:57702289-57702308 Msa0509290:intron 40.0%
GAAAGAACGTCATTTGCTTG+AGG - chr3_4:57702485-57702504 Msa0509290:intron 40.0%
TATTGATGAGGAGAAGATGC+AGG - chr3_4:57702560-57702579 Msa0509290:intron 40.0%
ATTGATGAGGAGAAGATGCA+GGG - chr3_4:57702561-57702580 Msa0509290:intron 40.0%
!! AATTCTTCTGAGACTCTTCC+TGG - chr3_4:57702639-57702658 Msa0509290:intron 40.0%
TCAAAAGCTCAACCTCAAGA+GGG + chr3_4:57702758-57702777 None:intergenic 40.0%
ATCAAAAGCTCAACCTCAAG+AGG + chr3_4:57702759-57702778 None:intergenic 40.0%
!! GTTGAGCTTTTGATAACCCT+CGG - chr3_4:57702765-57702784 Msa0509290:intron 40.0%
!!! TGCAACTAAGTTTTTTGCGG+AGG - chr3_4:57702827-57702846 Msa0509290:intron 40.0%
! GAGCTAGACTTGTTTGAAAG+AGG - chr3_4:57703056-57703075 Msa0509290:intron 40.0%
TCAATCAATGCTTGTGCTGA+AGG - chr3_4:57703134-57703153 Msa0509290:intron 40.0%
! TGATTTTTCTGGACTCTGAG+TGG - chr3_4:57703183-57703202 Msa0509290:intron 40.0%
GTGTATCAGTTATTGACCAC+CGG - chr3_4:57703272-57703291 Msa0509290:intron 40.0%
TGTATCAGTTATTGACCACC+GGG - chr3_4:57703273-57703292 Msa0509290:intron 40.0%
GAAGAACTACTTGGAAAGAG+TGG - chr3_4:57703318-57703337 Msa0509290:intron 40.0%
! TTCTCTGCTTGCCATTTAGA+AGG + chr3_4:57703383-57703402 None:intergenic 40.0%
! GAGGAGATTTTTGCAGCTAG+TGG - chr3_4:57691649-57691668 Msa0509290:CDS 45.0%
! AGATTTTTGCAGCTAGTGGC+TGG - chr3_4:57691653-57691672 Msa0509290:CDS 45.0%
! GATTTTTGCAGCTAGTGGCT+GGG - chr3_4:57691654-57691673 Msa0509290:CDS 45.0%
AGTGGCTGGGTATATTACCT+TGG - chr3_4:57691667-57691686 Msa0509290:CDS 45.0%
GTGGCTGGGTATATTACCTT+GGG - chr3_4:57691668-57691687 Msa0509290:CDS 45.0%
!! AATGCATCTAGGAGGGTATC+TGG - chr3_4:57692161-57692180 Msa0509290:CDS 45.0%
CAAGTGTGATGAGTGTAGTG+TGG + chr3_4:57692323-57692342 None:intergenic 45.0%
GTTGCACATGGGAATTGGTT+TGG - chr3_4:57692669-57692688 Msa0509290:CDS 45.0%
!! TCAGTTCAAACGGTTCGGTT+CGG + chr3_4:57693322-57693341 None:intergenic 45.0%
CGTCACGTTGCTGAAAATCT+TGG - chr3_4:57693668-57693687 Msa0509290:intron 45.0%
TGAGGTTAACACGCCATGAT+TGG + chr3_4:57693736-57693755 None:intergenic 45.0%
CAACGTGACACCAAACACAT+AGG + chr3_4:57694381-57694400 None:intergenic 45.0%
GAATGGTACCAGTACAGACT+GGG + chr3_4:57694682-57694701 None:intergenic 45.0%
TGAATGGTACCAGTACAGAC+TGG + chr3_4:57694683-57694702 None:intergenic 45.0%
CAACGTGACACCAAACACAT+AGG + chr3_4:57694381-57694400 None:intergenic 45.0%
TCACATCACCCAATCTGTAC+TGG - chr3_4:57695486-57695505 Msa0509290:CDS 45.0%
TGCAAAAACATTGTGGGGGT+GGG + chr3_4:57695656-57695675 None:intergenic 45.0%
GAGGTGCAAAAACATTGTGG+GGG + chr3_4:57695660-57695679 None:intergenic 45.0%
GCATGATCATCTGCAACTTG+AGG + chr3_4:57695722-57695741 None:intergenic 45.0%
GGTGGTTTGATCCATATAGG+AGG + chr3_4:57695978-57695997 None:intergenic 45.0%
TTGAAGAAGACAACGGTTGG+TGG + chr3_4:57695996-57696015 None:intergenic 45.0%
!! ATGATCCTTAAAGAGTGCCC+AGG - chr3_4:57696221-57696240 Msa0509290:CDS 45.0%
AATGCTAACGAGTGTCTCCT+GGG + chr3_4:57696241-57696260 None:intergenic 45.0%
AAATGCTAACGAGTGTCTCC+TGG + chr3_4:57696242-57696261 None:intergenic 45.0%
! GTTGGTTTCCCTTCTAGGTT+TGG - chr3_4:57698355-57698374 Msa0509290:intron 45.0%
GAATGGATCATGGCAACATG+TGG - chr3_4:57698807-57698826 Msa0509290:intron 45.0%
! TCTGAACCCTCCGATTTGTA+AGG - chr3_4:57699134-57699153 Msa0509290:intron 45.0%
CCAGTTCCTTACAAATCGGA+GGG + chr3_4:57699143-57699162 None:intergenic 45.0%
GTGGCCAGTTCCTTACAAAT+CGG + chr3_4:57699147-57699166 None:intergenic 45.0%
GATTTGTAAGGAACTGGCCA+CGG - chr3_4:57699146-57699165 Msa0509290:intron 45.0%
TCAAGGTTCACTTGGTACAG+AGG - chr3_4:57699459-57699478 Msa0509290:intron 45.0%
!! ACTTCATGTGATGGCTTTGG+TGG + chr3_4:57699901-57699920 None:intergenic 45.0%
ACACAACCTACGTAACGTTC+AGG + chr3_4:57699961-57699980 None:intergenic 45.0%
TCAGATTCAGAAGAGGATGG+TGG - chr3_4:57700063-57700082 Msa0509290:intron 45.0%
! AGAAGAGGATGGTGGTAAGA+GGG - chr3_4:57700071-57700090 Msa0509290:intron 45.0%
TGGTGGTAAGAGGGATCAAA+AGG - chr3_4:57700080-57700099 Msa0509290:intron 45.0%
! TGACGGTGATGGCAAGTTTA+AGG - chr3_4:57700158-57700177 Msa0509290:intron 45.0%
GAGGAAGAGACTTCATGTTG+TGG - chr3_4:57700371-57700390 Msa0509290:intron 45.0%
ACAGTAGGCTCTTCTTCAGT+TGG + chr3_4:57700591-57700610 None:intergenic 45.0%
GTGGAAGGAAACAAGCATGT+TGG - chr3_4:57700620-57700639 Msa0509290:intron 45.0%
! CACAAGGCATCCAAATCATC+AGG + chr3_4:57700696-57700715 None:intergenic 45.0%
! CTGATGATTTGGATGCCTTG+TGG - chr3_4:57700694-57700713 Msa0509290:intron 45.0%
!! GCATAACATTGCTGGCTCTA+TGG - chr3_4:57701771-57701790 Msa0509290:intron 45.0%
CTCTATGGAACCATCACTCA+TGG - chr3_4:57701786-57701805 Msa0509290:intron 45.0%
! AGAAAGGTTTTTCCTGCTCC+AGG + chr3_4:57701856-57701875 None:intergenic 45.0%
ATTTCCAAGGAAACGACCTC+TGG - chr3_4:57701909-57701928 Msa0509290:intron 45.0%
!!! AGAGTGTGGTTTTTGGAGCT+AGG + chr3_4:57701936-57701955 None:intergenic 45.0%
! TTTTCGCCATGTGTAGAGTG+TGG + chr3_4:57701950-57701969 None:intergenic 45.0%
TGGATAAGATAAACCGGCAC+AGG + chr3_4:57701994-57702013 None:intergenic 45.0%
!! GTGCCGGTTTATCTTATCCA+TGG - chr3_4:57701994-57702013 Msa0509290:intron 45.0%
CGGCCATGGATAAGATAAAC+CGG + chr3_4:57702000-57702019 None:intergenic 45.0%
TTGACATCACTAGAAGGTCG+TGG + chr3_4:57702081-57702100 None:intergenic 45.0%
GTCTTGGCAAGATACAGAAG+TGG - chr3_4:57702115-57702134 Msa0509290:intron 45.0%
ACACCCTAGTGTTCTTGTCA+TGG - chr3_4:57702143-57702162 Msa0509290:intron 45.0%
CACCCTAGTGTTCTTGTCAT+GGG - chr3_4:57702144-57702163 Msa0509290:intron 45.0%
AGCCCATGACAAGAACACTA+GGG + chr3_4:57702149-57702168 None:intergenic 45.0%
TAGCCCATGACAAGAACACT+AGG + chr3_4:57702150-57702169 None:intergenic 45.0%
AGGGCTTTCTCTCAATGCTT+TGG + chr3_4:57702235-57702254 None:intergenic 45.0%
!! AAAGCATTGAGAGAAAGCCC+TGG - chr3_4:57702234-57702253 Msa0509290:intron 45.0%
GTGCTGCGAAAAATCACTTC+CGG - chr3_4:57702591-57702610 Msa0509290:intron 45.0%
! CCATGGATGTATTGATCCGA+GGG + chr3_4:57702784-57702803 None:intergenic 45.0%
! ACCATGGATGTATTGATCCG+AGG + chr3_4:57702785-57702804 None:intergenic 45.0%
!!! GCAGCTGTTTTGATCAACCA+TGG + chr3_4:57702801-57702820 None:intergenic 45.0%
! TATTGCACGTGCTTTTCGAC+CGG - chr3_4:57703229-57703248 Msa0509290:intron 45.0%
! TAAACCATTTTCTGCTGGCC+CGG + chr3_4:57703251-57703270 None:intergenic 45.0%
ACTTAGGGAGATGGTTGAAG+AGG - chr3_4:57703418-57703437 Msa0509290:CDS 45.0%
!!! ATTTTTTTAAGAAAAAAAAA+AGG + chr3_4:57692012-57692031 None:intergenic 5.0%
!! TATATATATATATATATATG+AGG + chr3_4:57692138-57692157 None:intergenic 5.0%
!!! ATTTTTAGAATTTTTTTTAA+GGG - chr3_4:57692201-57692220 Msa0509290:CDS 5.0%
!!! TTAATAAATTCTTTTTTTAA+AGG - chr3_4:57696281-57696300 Msa0509290:CDS 5.0%
!! AAATTCTATTTATATTTATA+GGG + chr3_4:57696595-57696614 None:intergenic 5.0%
!! AAAATTCTATTTATATTTAT+AGG + chr3_4:57696596-57696615 None:intergenic 5.0%
!!! AATTAATACATTTTAATTAT+AGG - chr3_4:57698625-57698644 Msa0509290:intron 5.0%
TCTGCAGGAGCTCTATATCG+AGG - chr3_4:57691630-57691649 Msa0509290:CDS 50.0%
AGTGCTTCATCTCTGTCCCA+AGG + chr3_4:57691687-57691706 None:intergenic 50.0%
TTGGGACAGAGATGAAGCAC+TGG - chr3_4:57691686-57691705 Msa0509290:CDS 50.0%
! TGGGACAGAGATGAAGCACT+GGG - chr3_4:57691687-57691706 Msa0509290:CDS 50.0%
TGAGGTTAACACGCCACGAT+TGG + chr3_4:57694459-57694478 None:intergenic 50.0%
TCACATCACCCAGTCTGTAC+TGG - chr3_4:57694671-57694690 Msa0509290:CDS 50.0%
TGAGGTTAACACGCCACGAT+TGG + chr3_4:57694459-57694478 None:intergenic 50.0%
AAAAACATTGTGGGGGTGGG+GGG + chr3_4:57695653-57695672 None:intergenic 50.0%
CAAAAACATTGTGGGGGTGG+GGG + chr3_4:57695654-57695673 None:intergenic 50.0%
GCAAAAACATTGTGGGGGTG+GGG + chr3_4:57695655-57695674 None:intergenic 50.0%
GTGCAAAAACATTGTGGGGG+TGG + chr3_4:57695657-57695676 None:intergenic 50.0%
TTTCCAGAAGGAGCTAGAGG+CGG + chr3_4:57695807-57695826 None:intergenic 50.0%
GCATTTCCAGAAGGAGCTAG+AGG + chr3_4:57695810-57695829 None:intergenic 50.0%
GGGTTGAAGAAGACAACGGT+TGG + chr3_4:57695999-57696018 None:intergenic 50.0%
TGTCTCCTGGGCACTCTTTA+AGG + chr3_4:57696229-57696248 None:intergenic 50.0%
TCATGCAACGCGAGAGTCTT+CGG + chr3_4:57697806-57697825 None:intergenic 50.0%
TCGTAAGAAGCTGGAGCAGT+CGG + chr3_4:57698944-57698963 None:intergenic 50.0%
AATTCCGGGTCGTAAGAAGC+TGG + chr3_4:57698953-57698972 None:intergenic 50.0%
! CCCTCCGATTTGTAAGGAAC+TGG - chr3_4:57699140-57699159 Msa0509290:intron 50.0%
GCCAGTTCCTTACAAATCGG+AGG + chr3_4:57699144-57699163 None:intergenic 50.0%
GTACAGCCTGAACGTTACGT+AGG - chr3_4:57699952-57699971 Msa0509290:intron 50.0%
! CAGAAGAGGATGGTGGTAAG+AGG - chr3_4:57700070-57700089 Msa0509290:intron 50.0%
ATTCAACGCTGATGCCTGCA+TGG - chr3_4:57700527-57700546 Msa0509290:intron 50.0%
! AGCATCGAAAAGCGATGACG+AGG - chr3_4:57700662-57700681 Msa0509290:intron 50.0%
GATAGGCGGAATGCCCAAAA+AGG - chr3_4:57701539-57701558 Msa0509290:intron 50.0%
AACACAGCCACCACTTGAGT+TGG + chr3_4:57701821-57701840 None:intergenic 50.0%
ATATCACATGCTCCTGGAGC+AGG - chr3_4:57701841-57701860 Msa0509290:intron 50.0%
!!! GTTTTTGGAGCTAGGACCAG+AGG + chr3_4:57701928-57701947 None:intergenic 50.0%
TGTCGTCGAACTTGAACCTG+GGG + chr3_4:57702031-57702050 None:intergenic 50.0%
CTGTCGTCGAACTTGAACCT+GGG + chr3_4:57702032-57702051 None:intergenic 50.0%
CTAGAAGGTCGTGGAAATCC+AGG + chr3_4:57702072-57702091 None:intergenic 50.0%
GAGTACCAGTTACCCTCTTG+AGG - chr3_4:57702743-57702762 Msa0509290:intron 50.0%
CTCAACCTCAAGAGGGTAAC+TGG + chr3_4:57702751-57702770 None:intergenic 50.0%
CCCTCGGATCAATACATCCA+TGG - chr3_4:57702781-57702800 Msa0509290:intron 50.0%
! ATTGCACGTGCTTTTCGACC+GGG - chr3_4:57703230-57703249 Msa0509290:intron 50.0%
CTTATCTTCCTCCATCGACC+CGG + chr3_4:57703294-57703313 None:intergenic 50.0%
!! GACAGAGATGAAGCACTGGG+AGG - chr3_4:57691690-57691709 Msa0509290:CDS 55.0%
!! TGAAGCACTGGGAGGCTGTA+TGG - chr3_4:57691698-57691717 Msa0509290:CDS 55.0%
!! GAAGCACTGGGAGGCTGTAT+GGG - chr3_4:57691699-57691718 Msa0509290:CDS 55.0%
!! AAGCACTGGGAGGCTGTATG+GGG - chr3_4:57691700-57691719 Msa0509290:CDS 55.0%
GGAGGCTGTATGGGGTAAAC+TGG - chr3_4:57691708-57691727 Msa0509290:CDS 55.0%
GAGGGGTTGCACATGGGAAT+TGG - chr3_4:57692664-57692683 Msa0509290:CDS 55.0%
CAACGTGACGCCAAACACGT+AGG + chr3_4:57693658-57693677 None:intergenic 55.0%
TCCAAGATCGTGTCACGGCA+CGG - chr3_4:57694522-57694541 Msa0509290:CDS 55.0%
AAAACATTGTGGGGGTGGGG+GGG + chr3_4:57695652-57695671 None:intergenic 55.0%
TAGAGGCGGAGCCTCAACTT+TGG + chr3_4:57695793-57695812 None:intergenic 55.0%
TGCTCCAGCTTCTTACGACC+CGG - chr3_4:57698946-57698965 Msa0509290:intron 55.0%
GGGTGAACTCTGGATTACCG+TGG + chr3_4:57699166-57699185 None:intergenic 55.0%
CTTCGCTACTGGGTGAACTC+TGG + chr3_4:57699176-57699195 None:intergenic 55.0%
GCTTGCGACGTTCGAAACGT+AGG - chr3_4:57699926-57699945 Msa0509290:intron 55.0%
AGGACCAGAGGTCGTTTCCT+TGG + chr3_4:57701916-57701935 None:intergenic 55.0%
TTGAACCTGGGGAGGTTCGA+CGG + chr3_4:57702020-57702039 None:intergenic 55.0%
GCTGTCGTCGAACTTGAACC+TGG + chr3_4:57702033-57702052 None:intergenic 55.0%
GTTATTGACCACCGGGTCGA+TGG - chr3_4:57703280-57703299 Msa0509290:intron 55.0%
ACCGTGCCGTGACACGATCT+TGG + chr3_4:57694526-57694545 None:intergenic 60.0%
GTCTTGCTCACGAGTGCTCG+AGG - chr3_4:57696092-57696111 Msa0509290:CDS 60.0%
CGTCGAACTTGAACCTGGGG+AGG + chr3_4:57702028-57702047 None:intergenic 60.0%
TCGACCGGGCCAGCAGAAAA+TGG - chr3_4:57703244-57703263 Msa0509290:intron 60.0%
ATTGACCACCGGGTCGATGG+AGG - chr3_4:57703283-57703302 Msa0509290:intron 60.0%
ATCTTCCTCCATCGACCCGG+TGG + chr3_4:57703291-57703310 None:intergenic 60.0%
!! GGGTGGGGGGGTGGGTTAAT+TGG + chr3_4:57695640-57695659 None:intergenic 65.0%
! GCTCCGCCTCTAGCTCCTTC+TGG - chr3_4:57695801-57695820 Msa0509290:intron 65.0%
CATTGTGGGGGTGGGGGGGT+GGG + chr3_4:57695648-57695667 None:intergenic 70.0%
ACATTGTGGGGGTGGGGGGG+TGG + chr3_4:57695649-57695668 None:intergenic 70.0%
CTGGGGAGGTTCGACGGCCA+TGG + chr3_4:57702014-57702033 None:intergenic 70.0%
CATGGCCGTCGAACCTCCCC+AGG - chr3_4:57702012-57702031 Msa0509290:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 57691622 57703496 57691622 ID=Msa0509290;Name=Msa0509290
chr3_4 mRNA 57691622 57703496 57691622 ID=Msa0509290-mRNA-1;Parent=Msa0509290;Name=Msa0509290-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|0.8|1|1|5|0|1281
chr3_4 exon 57703397 57703496 57703397 ID=Msa0509290-mRNA-1:exon:13245;Parent=Msa0509290-mRNA-1
chr3_4 exon 57696083 57696327 57696083 ID=Msa0509290-mRNA-1:exon:13244;Parent=Msa0509290-mRNA-1
chr3_4 exon 57694351 57695751 57694351 ID=Msa0509290-mRNA-1:exon:13243;Parent=Msa0509290-mRNA-1
chr3_4 exon 57693917 57694063 57693917 ID=Msa0509290-mRNA-1:exon:13242;Parent=Msa0509290-mRNA-1
chr3_4 exon 57691622 57693574 57691622 ID=Msa0509290-mRNA-1:exon:13241;Parent=Msa0509290-mRNA-1
chr3_4 CDS 57703397 57703496 57703397 ID=Msa0509290-mRNA-1:cds;Parent=Msa0509290-mRNA-1
chr3_4 CDS 57696083 57696327 57696083 ID=Msa0509290-mRNA-1:cds;Parent=Msa0509290-mRNA-1
chr3_4 CDS 57694351 57695751 57694351 ID=Msa0509290-mRNA-1:cds;Parent=Msa0509290-mRNA-1
chr3_4 CDS 57693917 57694063 57693917 ID=Msa0509290-mRNA-1:cds;Parent=Msa0509290-mRNA-1
chr3_4 CDS 57691622 57693574 57691622 ID=Msa0509290-mRNA-1:cds;Parent=Msa0509290-mRNA-1
Gene Sequence

>Msa0509290

ATGCTGGTTCTGCAGGAGCTCTATATCGAGGAGATTTTTGCAGCTAGTGGCTGGGTATATTACCTTGGGACAGAGATGAAGCACTGGGAGGCTGTATGGGCATTTGAAGCAGTATTGAATGGATCATGGCAACATGTGGAACTCTTGAAAATAGAGTCAGGAAAAACTACCTTACATTTCATTGATACTGAACAAATTCAAAGCACTTTGTCATCAGATATTCGAATAAGATCAAGGAAAGCTACTTCATCCGACTGCTCCAGCTTCTTACGACCCGGAATTGATATATCTATGCTATTAGGCTATCGATACAATGATAATTCAGATCCATTTATGTCTATTCCAATGTGGATTGATGCAAGAATAAATTCTATACATAGACAGCCTCACAAATCTGATCAATGTTCATGTCAATTTTATGTAAACTTATATGATGATCAAGGTTCACTTGGTACAGAGGTAAAAACCCTTAATAAAGAGGTTAATGCAATTGAAATAGATCAAATTTTCATCCTCCAAAGGCTTCAACATAATACTTGTGAAGGCTTGTTAAAAGAAAATGATACCTCTGAAATTAAGCCTTATAGGTGGGATTCATCAGAAGATTGCTCTTCATTATCACAATCTAGATTACTCGTTGGGAAATTTTCATCTGATCTTTCGTGGTTTGTAATTACATCTTTTTTAAAGAAGGTTTCATTCCATATAAGATCTGTGCAAAACAAGATTGTGTATCAAGTTATGGGAAATGAAACTGACATTATTAGTCCTTGGCTTATAAATGTTGTGAACTTCAGCTTAAAAAAGGAATCACTAGTACCTATTGTTTCTCAATTTGATGTATTTTATGATTATGATGGAGAAGAAGATGAAGCGCCACCAAAGCCATCACATGAAGTTGAAGGCTTGCGACGTTCGAAACGTAGGAATGTACAGCCTGAACGTTACGTAGGTTGTGTTGTTGAGAAGTTGGAAGTTGGTAATTTTCGAACGTGTCCCTACAAGAGAACAACTTATATGATAGAAGATGAAAACTCTTCTTCAGATTCAGAAGAGGATGGTGGTAAGAGGGATCAAAAGGTTAATAAGCTAAATCATTGCAAAGCTATTAATGTGAACACAAGGAACAAAAATTCTGACGGTGATGGCAAGTTTAAGGTACATAAAACTGATGACATTTCTTCCAAATATCATTATTTGACTAATTATATTTCTTGTGCAAAGAAGAATGGTGCTGATGTGTTGAATTTGGAGTACGGCAATGAGCCTACAACAATATCAAGTGATGAAGAAGTTGATGGTAATGTTACTTTGAGAAATTATAATAGTTTCTTTAAAGAGAAGATTAAGAGGAAGAGACTTCATGTTGTGGATGATATGGATTTTGAAACCAAATGGGAAGGGATACATTTCAAAAAAGGAGCTCCAGCAGAAAATTTTCATTCGAGTTATTCGTCTAACAGAAGTCATGTTCATGAAGAACAAGATCATAAAGGCGGTAGAACATTCAACGCTGATGCCTGCATGGAAATAATAGATAGTTACATGAAGAATTTTGATAGTCTACCAACTGAAGAAGAGCCTACTGTAAATGACAAGTGGAAGGAAACAAGCATGTTGGAGAAAAAGGAAGAAGAAAAAGCATCGAAAAGCGATGACGAGGAAGAAAATCCTGATGATTTGGATGCCTTGTGGGAAGAAATGAATACAGCTTTGACATCAAGTTATCTTCTTGATGGAACTGCGGGTTCAACTGCAGAGTTTGTAGCTGATACCAAGAAAGAATCCAAGGATAGTTGTGAACATGATTATAGATTGGATGAAGAAATTGGAATATACTGTCTTCGATGTGGATTTGTGAAAACTGCAATACGAGACATTTCTGAGCCATTTGCGGAATGCCCAAAAAGGTACAAAGAGGAGAAACAGTGCAGTGAAGAAAATAAGGAACATAAATCAGAGCCAAAAGTTGATGAAGATTATAATAATGATATGTTCTCGACTCATGCTACTGATCCTGATGAACCATTGATTAATGAAATCGACAACGTTTGGGAATTGATTCCTGAACTTGAAGAAAAGATGCATGAACACCAGAAAAAAGCTTTTGAATTTCTTTGGCATAACATTGCTGGCTCTATGGAACCATCACTCATGGAAGAAAAATCCAACTCAAGTGGTGGCTGTGTTATATCACATGCTCCTGGAGCAGGAAAAACCTTTCTCATCATTTCTTTTCTTGTCAGTTACTTGAAGTTATTTCCAAGGAAACGACCTCTGGTCCTAGCTCCAAAAACCACACTCTACACATGGCGAAAAGAGTTCAAAAAATGGAAGATTCCTGTGCCGGTTTATCTTATCCATGGCCGTCGAACCTCCCCAGGTTCAAGTTCGACGACAGCAAAATCAATGATTCTTCCTGGATTTCCACGACCTTCTAGTGATGTCAAACATGTTTTGGATTGTCTTGGCAAGATACAGAAGTGGCACTCACACCCTAGTGTTCTTGTCATGGGCTATACTTCATTTTTACAATTAATGAGATCAAAAGATACAAAATTCGCACACAGAAAATACATGGCCAAAGCATTGAGAGAAAGCCCTGGAATCTTGATACTTGATGAAGGACACAATCCTAGAAGCACTAAATCAAGGTTGAGGAAATGTTTAATGAAACTTCCAACAGAATTGAGAATATTACTCTCCGGCACATTGTTTCAGAACAATTTTGGTGAATATTTCAACACACTTTGTTTAGCTAGACCGAAATTTGTTCATGAAGTTCTACAAGAGTTAGATTCTAAATACAGAAGGAAAGGCGGAAAAGTTGCGAAGAAAGAACGTCATTTGCTTGAGGCGCGCGCAAGAAAATTCTTCTTGAACAACATTGAAAAGAAAATTAACTCAGATATTGATGAGGAGAAGATGCAGGGTCTATATGTGCTGCGAAAAATCACTTCCGGTTTTATTGATGTGTACGACAGTGGAAATTCTTCTGAGACTCTTCCTGGTTTACAAATATATACATTGCTCATGAATACGTCCGATGAACAACATGAGATTGTACAGAAACTTCAGAAGAAAATGGCTGAGAGTACCAGTTACCCTCTTGAGGTTGAGCTTTTGATAACCCTCGGATCAATACATCCATGGTTGATCAAAACAGCTGCATCATGTGCAACTAAGTTTTTTGCGGAGGAAGAATTGAAGAAACTAGAAACAAGCAAATTTGATTTGAGAAAAGGTTCCAAAGTAAGATTTGTTCTGAGCCTAATCTCACGAGTAGTGAAAAATGAAAAGGTTCTTATCTTTTGTCACAATCTTGCACCTGTGAGATTCTTAATAGAGTTATTTGAGAAATATTTTCAGTGGCAAAATGGCAAAGAGATTATGGTACTAACAGGTGAGCTAGACTTGTTTGAAAGAGGGAAAGTGATAGATAAATTTGAAGATCAAAGCAGCGGTTCAAAGATACTTCTTGCTTCAATCAATGCTTGTGCTGAAGGTATAAGTTTAACAGCAGCTTCTAGAGTGATTTTTCTGGACTCTGAGTGGAATCCTTCAAAAACAAAGCAAGCTATTGCACGTGCTTTTCGACCGGGCCAGCAGAAAATGGTTTATGTGTATCAGTTATTGACCACCGGGTCGATGGAGGAAGATAAGTATAGAAGAACTACTTGGAAAGAGTGGGTTTCGTGCATGATTTTTAGTGAGGAGTTTGTGGAAGATCCTTCTAAATGGCAAGCAGAGAAGATTGAAGATGATATACTTAGGGAGATGGTTGAAGAGGATAAGTCTAAAGCTATTCACATGATTATGAAGAATGAAAAGGCTTCAACAATCTAA
Protein sequence

>Msa0509290

MLVLQELYIEEIFAASGWVYYLGTEMKHWEAVWAFEAVLNGSWQHVELLKIESGKTTLHFIDTEQIQSTLSSDIRIRSRKATSSDCSSFLRPGIDISMLLGYRYNDNSDPFMSIPMWIDARINSIHRQPHKSDQCSCQFYVNLYDDQGSLGTEVKTLNKEVNAIEIDQIFILQRLQHNTCEGLLKENDTSEIKPYRWDSSEDCSSLSQSRLLVGKFSSDLSWFVITSFLKKVSFHIRSVQNKIVYQVMGNETDIISPWLINVVNFSLKKESLVPIVSQFDVFYDYDGEEDEAPPKPSHEVEGLRRSKRRNVQPERYVGCVVEKLEVGNFRTCPYKRTTYMIEDENSSSDSEEDGGKRDQKVNKLNHCKAINVNTRNKNSDGDGKFKVHKTDDISSKYHYLTNYISCAKKNGADVLNLEYGNEPTTISSDEEVDGNVTLRNYNSFFKEKIKRKRLHVVDDMDFETKWEGIHFKKGAPAENFHSSYSSNRSHVHEEQDHKGGRTFNADACMEIIDSYMKNFDSLPTEEEPTVNDKWKETSMLEKKEEEKASKSDDEEENPDDLDALWEEMNTALTSSYLLDGTAGSTAEFVADTKKESKDSCEHDYRLDEEIGIYCLRCGFVKTAIRDISEPFAECPKRYKEEKQCSEENKEHKSEPKVDEDYNNDMFSTHATDPDEPLINEIDNVWELIPELEEKMHEHQKKAFEFLWHNIAGSMEPSLMEEKSNSSGGCVISHAPGAGKTFLIISFLVSYLKLFPRKRPLVLAPKTTLYTWRKEFKKWKIPVPVYLIHGRRTSPGSSSTTAKSMILPGFPRPSSDVKHVLDCLGKIQKWHSHPSVLVMGYTSFLQLMRSKDTKFAHRKYMAKALRESPGILILDEGHNPRSTKSRLRKCLMKLPTELRILLSGTLFQNNFGEYFNTLCLARPKFVHEVLQELDSKYRRKGGKVAKKERHLLEARARKFFLNNIEKKINSDIDEEKMQGLYVLRKITSGFIDVYDSGNSSETLPGLQIYTLLMNTSDEQHEIVQKLQKKMAESTSYPLEVELLITLGSIHPWLIKTAASCATKFFAEEELKKLETSKFDLRKGSKVRFVLSLISRVVKNEKVLIFCHNLAPVRFLIELFEKYFQWQNGKEIMVLTGELDLFERGKVIDKFEDQSSGSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTTGSMEEDKYRRTTWKEWVSCMIFSEEFVEDPSKWQAEKIEDDILREMVEEDKSKAIHMIMKNEKASTI*