Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512680 | GAU32744.1 | 63.473 | 167 | 60 | 1 | 97 | 262 | 105 | 271 | 5.82e-58 | 201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512680 | sp|Q9SFD5|TAD2A_ARATH | 40.714 | 140 | 68 | 4 | 97 | 233 | 118 | 245 | 9.63e-24 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512680 | A0A2Z6MJE3 | 63.473 | 167 | 60 | 1 | 97 | 262 | 105 | 271 | 2.78e-58 | 201 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0512680 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512680 | MtrunA17_Chr3g0120841 | 65.649 | 131 | 43 | 2 | 103 | 232 | 125 | 254 | 2.95e-48 | 167 |
| Msa0512680 | MtrunA17_Chr3g0120191 | 81.690 | 71 | 13 | 0 | 96 | 166 | 17 | 87 | 2.42e-37 | 127 |
| Msa0512680 | MtrunA17_Chr3g0120221 | 78.873 | 71 | 15 | 0 | 96 | 166 | 113 | 183 | 1.70e-33 | 120 |
| Msa0512680 | MtrunA17_Chr2g0290321 | 44.615 | 130 | 68 | 4 | 97 | 224 | 115 | 242 | 1.05e-23 | 99.8 |
| Msa0512680 | MtrunA17_Chr2g0290341 | 56.923 | 65 | 28 | 0 | 97 | 161 | 99 | 163 | 1.63e-20 | 90.5 |
| Msa0512680 | MtrunA17_Chr7g0239471 | 57.812 | 64 | 27 | 0 | 104 | 167 | 121 | 184 | 3.03e-18 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512680 | AT3G07740.2 | 40.714 | 140 | 68 | 4 | 97 | 233 | 47 | 174 | 5.73e-25 | 103 |
| Msa0512680 | AT3G07740.3 | 40.714 | 140 | 68 | 4 | 97 | 233 | 97 | 224 | 8.44e-25 | 103 |
| Msa0512680 | AT3G07740.1 | 40.714 | 140 | 68 | 4 | 97 | 233 | 118 | 245 | 9.79e-25 | 103 |
| Msa0512680 | AT3G07740.4 | 40.714 | 140 | 68 | 4 | 97 | 233 | 125 | 252 | 1.03e-24 | 103 |
| Msa0512680 | AT4G16420.2 | 64.615 | 65 | 23 | 0 | 97 | 161 | 112 | 176 | 2.22e-23 | 99.0 |
| Msa0512680 | AT4G16420.1 | 64.615 | 65 | 23 | 0 | 97 | 161 | 112 | 176 | 2.24e-23 | 99.0 |
| Msa0512680 | AT4G16420.3 | 64.615 | 65 | 23 | 0 | 97 | 161 | 112 | 176 | 2.28e-23 | 99.0 |
Find 55 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAATGGGTATAATTTATA+TGG | 0.196386 | 3_4:-62582438 | Msa0512680:CDS |
| TCTAAGATGGCTGCCATTAA+TGG | 0.200660 | 3_4:-62582453 | Msa0512680:CDS |
| GTAGGATTTGTCTTATTCTA+TGG | 0.220086 | 3_4:-62583950 | Msa0512680:intron |
| AAAGAACCTCCGCTTTCTTA+TGG | 0.227689 | 3_4:-62582568 | Msa0512680:CDS |
| ACATGTATGGATTTGCAAAT+TGG | 0.237240 | 3_4:-62584371 | Msa0512680:CDS |
| ATATAAATTATACCCATTAA+TGG | 0.301447 | 3_4:+62582440 | None:intergenic |
| TTCAGAGTCAGCTCTGCATT+TGG | 0.311067 | 3_4:+62582589 | None:intergenic |
| CTACTTCAGTAACAAAATAA+AGG | 0.313654 | 3_4:+62582288 | None:intergenic |
| AATTCAAATGGCTTGTTCTC+TGG | 0.322239 | 3_4:-62585976 | None:intergenic |
| GGCTTGTTCTCTGGAATTCA+TGG | 0.325568 | 3_4:-62585967 | Msa0512680:CDS |
| CGGTAACTACATCATTATTC+TGG | 0.355984 | 3_4:+62582351 | None:intergenic |
| CTAAGATGGCTGCCATTAAT+GGG | 0.390665 | 3_4:-62582452 | Msa0512680:CDS |
| GAAGTACGCGCACTCCAATC+TGG | 0.448025 | 3_4:+62584529 | None:intergenic |
| TACTTCAGTAACAAAATAAA+GGG | 0.462407 | 3_4:+62582289 | None:intergenic |
| TAGGATTTGTCTTATTCTAT+GGG | 0.465480 | 3_4:-62583949 | Msa0512680:CDS |
| TTCCGCTTACATGTCCAGAT+TGG | 0.474697 | 3_4:-62584543 | Msa0512680:CDS |
| ACGTGGAAGCAAGAATATCC+TGG | 0.477248 | 3_4:+62585886 | None:intergenic |
| TCTTGCTTCCACGTTACAAA+AGG | 0.481014 | 3_4:-62585877 | Msa0512680:intron |
| TTAATGGGTATAATTTATAT+GGG | 0.485227 | 3_4:-62582437 | Msa0512680:CDS |
| AGAGTCAGCTCTGCATTTGG+AGG | 0.489977 | 3_4:+62582592 | None:intergenic |
| AAAAGCGAATCTCAGTGTAT+TGG | 0.503151 | 3_4:-62584321 | Msa0512680:CDS |
| TCAGATATACATCATTATAG+TGG | 0.505363 | 3_4:+62584298 | None:intergenic |
| AACAATTCTGAGAAGAAGAA+AGG | 0.509049 | 3_4:-62585924 | Msa0512680:CDS |
| GAACTCATTGCCATGGCAAA+GGG | 0.509241 | 3_4:-62583913 | Msa0512680:CDS |
| TCAAATAGCCTTACAGGTAG+AGG | 0.513546 | 3_4:+62584261 | None:intergenic |
| TCAGCTTGAATATTCTAAGA+TGG | 0.521307 | 3_4:-62582466 | Msa0512680:intron |
| ATCATTATTCTGGCTCACAT+TGG | 0.522015 | 3_4:+62582361 | None:intergenic |
| TGGAGTGCGCGTACTTCTTG+AGG | 0.523754 | 3_4:-62584523 | Msa0512680:intron |
| TTGCAAATCCATACATGTCA+AGG | 0.533100 | 3_4:+62584376 | None:intergenic |
| TGAAGATCATGAAGAAGAAG+AGG | 0.533474 | 3_4:-62585461 | Msa0512680:CDS |
| TAGTTTACTATTAGAACCAA+TGG | 0.537902 | 3_4:-62585383 | Msa0512680:CDS |
| GGAACTCATTGCCATGGCAA+AGG | 0.538488 | 3_4:-62583914 | Msa0512680:CDS |
| AGAAGAAAGGTTGGAACAAG+TGG | 0.539443 | 3_4:-62585911 | Msa0512680:CDS |
| ATTCTGAGAAGAAGAAAGGT+TGG | 0.540685 | 3_4:-62585920 | Msa0512680:CDS |
| CTTAGATCATACCAGTCCAT+TGG | 0.541324 | 3_4:+62585367 | None:intergenic |
| ATGGTGTTGCTGAACATGTT+GGG | 0.547672 | 3_4:-62584347 | Msa0512680:CDS |
| GAAGATCATGAAGAAGAAGA+GGG | 0.559113 | 3_4:-62585460 | Msa0512680:CDS |
| TACTATTAGAACCAATGGAC+TGG | 0.562499 | 3_4:-62585378 | Msa0512680:intron |
| CTTACAGGTAGAGGAAAAGA+TGG | 0.568809 | 3_4:+62584270 | None:intergenic |
| GAGTTGATCTCCCTTTGCCA+TGG | 0.571402 | 3_4:+62583903 | None:intergenic |
| TACTTTATTCCATAAGAAAG+CGG | 0.571493 | 3_4:+62582559 | None:intergenic |
| CGTGGAAGCAAGAATATCCT+GGG | 0.572834 | 3_4:+62585887 | None:intergenic |
| TCTTTCAAGAACAATCAAGA+AGG | 0.579208 | 3_4:-62582387 | Msa0512680:CDS |
| TATGGATTTGCAAATTGGAA+TGG | 0.589389 | 3_4:-62584366 | Msa0512680:CDS |
| AATGATGTAGTTACCGCGGA+AGG | 0.595395 | 3_4:-62582344 | Msa0512680:CDS |
| AATGGTGTTGCTGAACATGT+TGG | 0.605755 | 3_4:-62584348 | Msa0512680:CDS |
| CAAAGAGGAACTCATTGCCA+TGG | 0.615015 | 3_4:-62583920 | Msa0512680:CDS |
| CTCAGAAAACATACCTTCCG+CGG | 0.617736 | 3_4:+62582331 | None:intergenic |
| TGCAAATCCATACATGTCAA+GGG | 0.619428 | 3_4:+62584377 | None:intergenic |
| CTCCAATCTGGACATGTAAG+CGG | 0.649769 | 3_4:+62584541 | None:intergenic |
| TTCTATGGGAAAGAACAAAG+AGG | 0.651784 | 3_4:-62583935 | Msa0512680:CDS |
| AGGTTGGAACAAGTGGACCC+AGG | 0.653230 | 3_4:-62585904 | Msa0512680:CDS |
| TTTATTCCATAAGAAAGCGG+AGG | 0.664080 | 3_4:+62582562 | None:intergenic |
| AAGGGAGATCAACTCAACAA+AGG | 0.675949 | 3_4:-62583895 | Msa0512680:intron |
| GAATAATGATGTAGTTACCG+CGG | 0.694055 | 3_4:-62582348 | Msa0512680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATTAATAAATATAATGA+AGG | - | chr3_4:62582713-62582732 | Msa0512680:intron | 10.0% |
| !!! | ATTTTATTTTAGTTTTTTAC+AGG | - | chr3_4:62583644-62583663 | Msa0512680:intron | 10.0% |
| !! | ATGATAAAATGAAATAATTA+AGG | + | chr3_4:62583803-62583822 | None:intergenic | 10.0% |
| !!! | CGTAAAAAATTAATTTTTTT+TGG | + | chr3_4:62584153-62584172 | None:intergenic | 10.0% |
| !!! | AAAAAAATTAATTTTTTACG+TGG | - | chr3_4:62584153-62584172 | Msa0512680:intron | 10.0% |
| !!! | AAAAAATTAATTTTTTACGT+GGG | - | chr3_4:62584154-62584173 | Msa0512680:intron | 10.0% |
| !!! | AAATGCTATTTTTTTTAATA+GGG | + | chr3_4:62584464-62584483 | None:intergenic | 10.0% |
| !!! | AAAATGCTATTTTTTTTAAT+AGG | + | chr3_4:62584465-62584484 | None:intergenic | 10.0% |
| !!! | ATTAAAAAAAATAGCATTTT+TGG | - | chr3_4:62584465-62584484 | Msa0512680:intron | 10.0% |
| !!! | ACATATAAGATTTTAATTTT+TGG | + | chr3_4:62585372-62585391 | None:intergenic | 10.0% |
| !! | TTAAAAAAATAAGAGTAAAT+TGG | + | chr3_4:62585696-62585715 | None:intergenic | 10.0% |
| !! | AACAAAAAACAAAAAATGAA+GGG | - | chr3_4:62582493-62582512 | Msa0512680:intron | 15.0% |
| !!! | TTTTTTTCAAAACTATCTAA+TGG | - | chr3_4:62582886-62582905 | Msa0512680:intron | 15.0% |
| !!! | AATTTTAACTTTTTCCAATT+TGG | + | chr3_4:62583032-62583051 | None:intergenic | 15.0% |
| !! | ATTGGAAAAAGTTAAAATTA+TGG | - | chr3_4:62583033-62583052 | Msa0512680:intron | 15.0% |
| !! | TTGGAAAAAGTTAAAATTAT+GGG | - | chr3_4:62583034-62583053 | Msa0512680:intron | 15.0% |
| !! | GAAAAAAACAAATAAGTTAA+GGG | - | chr3_4:62583065-62583084 | Msa0512680:intron | 15.0% |
| !! | AAAATAATGATAATTACTCT+TGG | + | chr3_4:62583226-62583245 | None:intergenic | 15.0% |
| !! | TTGAATTAATACCATTATAA+CGG | - | chr3_4:62583590-62583609 | Msa0512680:intron | 15.0% |
| !! | ATAAAATAAATTAATGTGGT+AGG | + | chr3_4:62583631-62583650 | None:intergenic | 15.0% |
| !!! | AATGCTATTTTTTTTAATAG+GGG | + | chr3_4:62584463-62584482 | None:intergenic | 15.0% |
| !!! | ACTAATGCTATTTTTTTTAA+TGG | - | chr3_4:62584637-62584656 | Msa0512680:intron | 15.0% |
| !!! | CTAATGCTATTTTTTTTAAT+GGG | - | chr3_4:62584638-62584657 | Msa0512680:intron | 15.0% |
| !!! | TAATGCTATTTTTTTTAATG+GGG | - | chr3_4:62584639-62584658 | Msa0512680:intron | 15.0% |
| !!! | ATAAGATTTTAATTTTTGGA+GGG | + | chr3_4:62585368-62585387 | None:intergenic | 15.0% |
| !!! | TATAAGATTTTAATTTTTGG+AGG | + | chr3_4:62585369-62585388 | None:intergenic | 15.0% |
| !! | ATATAAATTATACCCATTAA+TGG | + | chr3_4:62585785-62585804 | None:intergenic | 15.0% |
| !!! | ATTAATGGGTATAATTTATA+TGG | - | chr3_4:62585784-62585803 | Msa0512680:intron | 15.0% |
| !!! | TTAATGGGTATAATTTATAT+GGG | - | chr3_4:62585785-62585804 | Msa0512680:intron | 15.0% |
| !!! | GTTTTATTTTTCATGTGTAT+AGG | - | chr3_4:62582421-62582440 | Msa0512680:CDS | 20.0% |
| !! | CAACAAAAAACAAAAAATGA+AGG | - | chr3_4:62582492-62582511 | Msa0512680:intron | 20.0% |
| !! | ACAAAAAACAAAAAATGAAG+GGG | - | chr3_4:62582494-62582513 | Msa0512680:intron | 20.0% |
| !!! | TTTGGTTAACTTGAATTTTA+AGG | - | chr3_4:62582678-62582697 | Msa0512680:intron | 20.0% |
| !!! | GATAGTTTTGAAAAAAAACA+AGG | + | chr3_4:62582883-62582902 | None:intergenic | 20.0% |
| !!! | CTTATTTGTTTTTTTCGATT+TGG | + | chr3_4:62583061-62583080 | None:intergenic | 20.0% |
| !! | CGAAAAAAACAAATAAGTTA+AGG | - | chr3_4:62583064-62583083 | Msa0512680:intron | 20.0% |
| !!! | ATGCTATTTTTTTTAATAGG+GGG | + | chr3_4:62584462-62584481 | None:intergenic | 20.0% |
| !!! | AATGCTATTTTTTTTAATGG+GGG | - | chr3_4:62584640-62584659 | Msa0512680:intron | 20.0% |
| !! | AAAACAAAGTAAATAGATTG+AGG | + | chr3_4:62585210-62585229 | None:intergenic | 20.0% |
| !! | AAGCTATCATATAATAAGTT+TGG | + | chr3_4:62585336-62585355 | None:intergenic | 20.0% |
| !! | AAAATAAGAGTAAATTGGTA+AGG | + | chr3_4:62585691-62585710 | None:intergenic | 20.0% |
| !! | TACTTCAGTAACAAAATAAA+GGG | + | chr3_4:62585936-62585955 | None:intergenic | 20.0% |
| !!! | AGGATTTTGTTGTTAATGTT+TGG | - | chr3_4:62582399-62582418 | Msa0512680:CDS | 25.0% |
| !! | TAGCTTCTGAATTTTTATTG+TGG | + | chr3_4:62582532-62582551 | None:intergenic | 25.0% |
| !!! | ATTTTGGTTGAATGAAGAAT+TGG | - | chr3_4:62582653-62582672 | Msa0512680:intron | 25.0% |
| !! | TTGAATGAAGAATTGGATTT+TGG | - | chr3_4:62582660-62582679 | Msa0512680:intron | 25.0% |
| !!! | AACTTGAATTTTAAGGTTTC+TGG | - | chr3_4:62582685-62582704 | Msa0512680:intron | 25.0% |
| !!! | ACTTGAATTTTAAGGTTTCT+GGG | - | chr3_4:62582686-62582705 | Msa0512680:intron | 25.0% |
| ! | TAGTTTACTATTAGAACCAA+TGG | - | chr3_4:62582839-62582858 | Msa0512680:intron | 25.0% |
| ! | ATTGATCCATCTTATACATT+TGG | - | chr3_4:62582953-62582972 | Msa0512680:intron | 25.0% |
| ! | TTGATCCATCTTATACATTT+GGG | - | chr3_4:62582954-62582973 | Msa0512680:intron | 25.0% |
| !!! | TTTTGGCTTAATTACATGTT+CGG | + | chr3_4:62583092-62583111 | None:intergenic | 25.0% |
| !!! | GTCGGTCATTTATATTTTTT+TGG | + | chr3_4:62583109-62583128 | None:intergenic | 25.0% |
| !!! | CTTACTTGCTATATGTTAAA+TGG | - | chr3_4:62583763-62583782 | Msa0512680:intron | 25.0% |
| !!! | TAACAAGCTTGTTTTGTTTT+AGG | - | chr3_4:62583822-62583841 | Msa0512680:intron | 25.0% |
| ! | TCAGATATACATCATTATAG+TGG | + | chr3_4:62583927-62583946 | None:intergenic | 25.0% |
| !! | TAGGATTTGTCTTATTCTAT+GGG | - | chr3_4:62584273-62584292 | Msa0512680:intron | 25.0% |
| !!! | TTTGCATCCTTGTTTTATTT+AGG | - | chr3_4:62584388-62584407 | Msa0512680:intron | 25.0% |
| !!! | GTTTTAGCCTAAATAAAACA+AGG | + | chr3_4:62584398-62584417 | None:intergenic | 25.0% |
| !!! | TGCAACTTTTTCTAAAGATA+AGG | - | chr3_4:62584546-62584565 | Msa0512680:CDS | 25.0% |
| !!! | GCAACTTTTTCTAAAGATAA+GGG | - | chr3_4:62584547-62584566 | Msa0512680:CDS | 25.0% |
| !!! | CAACTTTTTCTAAAGATAAG+GGG | - | chr3_4:62584548-62584567 | Msa0512680:CDS | 25.0% |
| !!! | ATGCTATTTTTTTTAATGGG+GGG | - | chr3_4:62584641-62584660 | Msa0512680:intron | 25.0% |
| ! | AGTAAGGATAGTAGATAATA+TGG | + | chr3_4:62584788-62584807 | None:intergenic | 25.0% |
| !!! | ATTTGAAGGGAAAGTTTTAT+CGG | + | chr3_4:62585107-62585126 | None:intergenic | 25.0% |
| !! | AAAGTATCACTCAATTTGAA+GGG | + | chr3_4:62585120-62585139 | None:intergenic | 25.0% |
| !!! | TCATATTTGAGTTGACATAT+TGG | - | chr3_4:62585441-62585460 | Msa0512680:CDS | 25.0% |
| !!! | CATATTTGAGTTGACATATT+GGG | - | chr3_4:62585442-62585461 | Msa0512680:CDS | 25.0% |
| ! | GTCAAAGAGAATATATTATC+CGG | + | chr3_4:62585479-62585498 | None:intergenic | 25.0% |
| ! | TAAAAATGCAACCAACAAAT+CGG | + | chr3_4:62585568-62585587 | None:intergenic | 25.0% |
| ! | TACTTTATTCCATAAGAAAG+CGG | + | chr3_4:62585666-62585685 | None:intergenic | 25.0% |
| ! | CTACTTCAGTAACAAAATAA+AGG | + | chr3_4:62585937-62585956 | None:intergenic | 25.0% |
| !!! | CTTTATTTTGTTACTGAAGT+AGG | - | chr3_4:62585935-62585954 | Msa0512680:CDS | 25.0% |
| ! | AACAATTCTGAGAAGAAGAA+AGG | - | chr3_4:62582298-62582317 | Msa0512680:CDS | 30.0% |
| GTTGAACTTGAACATGATTA+AGG | - | chr3_4:62582379-62582398 | Msa0512680:CDS | 30.0% | |
| ATAGGATTAAACACGACAAA+AGG | - | chr3_4:62582439-62582458 | Msa0512680:CDS | 30.0% | |
| TAGGATTAAACACGACAAAA+GGG | - | chr3_4:62582440-62582459 | Msa0512680:CDS | 30.0% | |
| TCAAAAGAACTAAACACATG+TGG | + | chr3_4:62582580-62582599 | None:intergenic | 30.0% | |
| !! | GTGAATGAATGAATGGATTT+TGG | - | chr3_4:62582637-62582656 | Msa0512680:intron | 30.0% |
| TGATCCATCTTATACATTTG+GGG | - | chr3_4:62582955-62582974 | Msa0512680:intron | 30.0% | |
| TTAACCCCAAATGTATAAGA+TGG | + | chr3_4:62582962-62582981 | None:intergenic | 30.0% | |
| ! | CATTTGGGGTTAAAAACTAA+CGG | - | chr3_4:62582969-62582988 | Msa0512680:intron | 30.0% |
| !! | TTTGTGAGCTATTTTATCGT+CGG | + | chr3_4:62583127-62583146 | None:intergenic | 30.0% |
| ATAATTACTCTTGGAGTCTT+TGG | + | chr3_4:62583217-62583236 | None:intergenic | 30.0% | |
| ACATGTATGGATTTGCAAAT+TGG | - | chr3_4:62583851-62583870 | Msa0512680:intron | 30.0% | |
| TATGGATTTGCAAATTGGAA+TGG | - | chr3_4:62583856-62583875 | Msa0512680:intron | 30.0% | |
| GCAACATGTATTTGAATTCA+TGG | - | chr3_4:62584010-62584029 | Msa0512680:intron | 30.0% | |
| ATGGTGTAATTGTTTGTATG+TGG | - | chr3_4:62584029-62584048 | Msa0512680:intron | 30.0% | |
| ! | CCAGAAATTTTACATAGCTT+GGG | - | chr3_4:62584070-62584089 | Msa0512680:intron | 30.0% |
| ! | GTAGGATTTGTCTTATTCTA+TGG | - | chr3_4:62584272-62584291 | Msa0512680:intron | 30.0% |
| ATGATCTAAATCACCATTTG+TGG | - | chr3_4:62584361-62584380 | Msa0512680:CDS | 30.0% | |
| CATATTTCCCTTATGTTAGA+GGG | - | chr3_4:62584580-62584599 | Msa0512680:intron | 30.0% | |
| AGCATATTTCCCTAAACATA+GGG | - | chr3_4:62584610-62584629 | Msa0512680:intron | 30.0% | |
| GAAGACCTTGAAAATCTATA+AGG | + | chr3_4:62584738-62584757 | None:intergenic | 30.0% | |
| AGTTAAATCACTAAAGGTAG+AGG | + | chr3_4:62584760-62584779 | None:intergenic | 30.0% | |
| GAGAGTAGTTAAATCACTAA+AGG | + | chr3_4:62584766-62584785 | None:intergenic | 30.0% | |
| AAGATGTTGTGTTGAATGTA+CGG | + | chr3_4:62584998-62585017 | None:intergenic | 30.0% | |
| !! | GAAAGTATCACTCAATTTGA+AGG | + | chr3_4:62585121-62585140 | None:intergenic | 30.0% |
| TAGATACATAGCATGCATTT+AGG | + | chr3_4:62585243-62585262 | None:intergenic | 30.0% | |
| CATGATCTATATACTTCACT+TGG | + | chr3_4:62585309-62585328 | None:intergenic | 30.0% | |
| ATTCTGCATAAGACATAACA+TGG | + | chr3_4:62585608-62585627 | None:intergenic | 30.0% | |
| ATTTATGACTGCTAATCCTT+TGG | - | chr3_4:62585724-62585743 | Msa0512680:intron | 30.0% | |
| ! | TCAGCTTGAATATTCTAAGA+TGG | - | chr3_4:62585756-62585775 | Msa0512680:intron | 30.0% |
| TCTTTCAAGAACAATCAAGA+AGG | - | chr3_4:62585835-62585854 | Msa0512680:intron | 30.0% | |
| ! | ATTCTGAGAAGAAGAAAGGT+TGG | - | chr3_4:62582302-62582321 | Msa0512680:CDS | 35.0% |
| ! | TTGTTACACCTTTTGTAACG+TGG | + | chr3_4:62582356-62582375 | None:intergenic | 35.0% |
| ! | GTTACAAAAGGTGTAACAAG+TGG | - | chr3_4:62582357-62582376 | Msa0512680:CDS | 35.0% |
| TTGTTCCTCTTTCTTCTATG+TGG | - | chr3_4:62582615-62582634 | Msa0512680:intron | 35.0% | |
| ATTCACCACATAGAAGAAAG+AGG | + | chr3_4:62582623-62582642 | None:intergenic | 35.0% | |
| CTATGTGGTGAATGAATGAA+TGG | - | chr3_4:62582630-62582649 | Msa0512680:intron | 35.0% | |
| TGAAGATCATGAAGAAGAAG+AGG | - | chr3_4:62582761-62582780 | Msa0512680:intron | 35.0% | |
| GAAGATCATGAAGAAGAAGA+GGG | - | chr3_4:62582762-62582781 | Msa0512680:intron | 35.0% | |
| TACTATTAGAACCAATGGAC+TGG | - | chr3_4:62582844-62582863 | Msa0512680:intron | 35.0% | |
| !! | AATGGACTGGTATGATCTAA+GGG | - | chr3_4:62582857-62582876 | Msa0512680:intron | 35.0% |
| AAGATGGATCAATTTGACTG+TGG | + | chr3_4:62582946-62582965 | None:intergenic | 35.0% | |
| !!! | GAATGGATCATTTTGACTGA+CGG | - | chr3_4:62582991-62583010 | Msa0512680:intron | 35.0% |
| GCATATTTAAGGGACCAAAT+TGG | - | chr3_4:62583015-62583034 | Msa0512680:intron | 35.0% | |
| TATCAAATGCGCCGTTATAA+TGG | + | chr3_4:62583604-62583623 | None:intergenic | 35.0% | |
| TGCAAATCCATACATGTCAA+GGG | + | chr3_4:62583848-62583867 | None:intergenic | 35.0% | |
| TTGCAAATCCATACATGTCA+AGG | + | chr3_4:62583849-62583868 | None:intergenic | 35.0% | |
| AAAAGCGAATCTCAGTGTAT+TGG | - | chr3_4:62583901-62583920 | Msa0512680:CDS | 35.0% | |
| AATTGTTTGTATGTGGACGT+AGG | - | chr3_4:62584036-62584055 | Msa0512680:intron | 35.0% | |
| ! | GCCAGAAATTTTACATAGCT+TGG | - | chr3_4:62584069-62584088 | Msa0512680:intron | 35.0% |
| CCCAAGCTATGTAAAATTTC+TGG | + | chr3_4:62584073-62584092 | None:intergenic | 35.0% | |
| ! | TACGTGGGTTAATATGCTAT+TGG | - | chr3_4:62584169-62584188 | Msa0512680:intron | 35.0% |
| ! | ACGTGGGTTAATATGCTATT+GGG | - | chr3_4:62584170-62584189 | Msa0512680:intron | 35.0% |
| GGTTAATATGCTATTGGGTT+GGG | - | chr3_4:62584175-62584194 | Msa0512680:intron | 35.0% | |
| TTCTATGGGAAAGAACAAAG+AGG | - | chr3_4:62584287-62584306 | Msa0512680:CDS | 35.0% | |
| ! | TCGCAACTTTTGCAAACTTA+GGG | + | chr3_4:62584670-62584689 | None:intergenic | 35.0% |
| ! | ATCGCAACTTTTGCAAACTT+AGG | + | chr3_4:62584669-62584688 | None:intergenic | 35.0% |
| !! | TCAGTAATTTTTGGACGAAG+GGG | + | chr3_4:62584492-62584511 | None:intergenic | 35.0% |
| !! | CTCAGTAATTTTTGGACGAA+GGG | + | chr3_4:62584493-62584512 | None:intergenic | 35.0% |
| !! | TCTCAGTAATTTTTGGACGA+AGG | + | chr3_4:62584494-62584513 | None:intergenic | 35.0% |
| GTCCAAAAATTACTGAGAAG+AGG | - | chr3_4:62584496-62584515 | Msa0512680:intron | 35.0% | |
| !!! | TGCAATTAAGCCCCTTTTTT+GGG | + | chr3_4:62584530-62584549 | None:intergenic | 35.0% |
| !!! | TTGCAATTAAGCCCCTTTTT+TGG | + | chr3_4:62584531-62584550 | None:intergenic | 35.0% |
| GCATATTTCCCTTATGTTAG+AGG | - | chr3_4:62584579-62584598 | Msa0512680:intron | 35.0% | |
| ! | CTTTTGACCCTCTAACATAA+GGG | + | chr3_4:62584590-62584609 | None:intergenic | 35.0% |
| ! | TCTTTTGACCCTCTAACATA+AGG | + | chr3_4:62584591-62584610 | None:intergenic | 35.0% |
| GAGCATATTTCCCTAAACAT+AGG | - | chr3_4:62584609-62584628 | Msa0512680:intron | 35.0% | |
| GCATATTTCCCTAAACATAG+GGG | - | chr3_4:62584611-62584630 | Msa0512680:intron | 35.0% | |
| CATATTTCCCTAAACATAGG+GGG | - | chr3_4:62584612-62584631 | Msa0512680:intron | 35.0% | |
| ! | GTTTGCAAAAGTTGCGATTT+TGG | + | chr3_4:62584436-62584455 | None:intergenic | 35.0% |
| ! | ATCGCAACTTTTGCAAACTT+AGG | - | chr3_4:62584669-62584688 | Msa0512680:intron | 35.0% |
| ! | TCGCAACTTTTGCAAACTTA+GGG | - | chr3_4:62584670-62584689 | Msa0512680:intron | 35.0% |
| CTCGGTTGTGGTTAAATAAA+AGG | + | chr3_4:62584715-62584734 | None:intergenic | 35.0% | |
| CCTTGAAAATCTATAAGGCT+CGG | + | chr3_4:62584733-62584752 | None:intergenic | 35.0% | |
| !! | TAGAGAAGATGATGGAAAGT+AGG | + | chr3_4:62584855-62584874 | None:intergenic | 35.0% |
| ATTTCTAATCATATCTCGCC+TGG | - | chr3_4:62584967-62584986 | Msa0512680:intron | 35.0% | |
| TAAGACTGTAAATGTTGAGC+GGG | + | chr3_4:62585077-62585096 | None:intergenic | 35.0% | |
| GTAAGACTGTAAATGTTGAG+CGG | + | chr3_4:62585078-62585097 | None:intergenic | 35.0% | |
| ATGCATGCTATGTATCTAAG+AGG | - | chr3_4:62585245-62585264 | Msa0512680:intron | 35.0% | |
| ATGTATCTAAGAGGTTGTGT+TGG | - | chr3_4:62585254-62585273 | Msa0512680:intron | 35.0% | |
| AAGATGTATTCACCAAGTCT+TGG | + | chr3_4:62585405-62585424 | None:intergenic | 35.0% | |
| TCAACTCAAATATGACTACC+AGG | + | chr3_4:62585436-62585455 | None:intergenic | 35.0% | |
| !!! | TTTTGTACTCACCGATTTGT+TGG | - | chr3_4:62585554-62585573 | Msa0512680:intron | 35.0% |
| TTTATTCCATAAGAAAGCGG+AGG | + | chr3_4:62585663-62585682 | None:intergenic | 35.0% | |
| AAGCTGAGATGTTATACCAA+AGG | + | chr3_4:62585743-62585762 | None:intergenic | 35.0% | |
| !! | ATCATTATTCTGGCTCACAT+TGG | + | chr3_4:62585864-62585883 | None:intergenic | 35.0% |
| CGGTAACTACATCATTATTC+TGG | + | chr3_4:62585874-62585893 | None:intergenic | 35.0% | |
| GAATAATGATGTAGTTACCG+CGG | - | chr3_4:62585874-62585893 | Msa0512680:intron | 35.0% | |
| !! | GAAGGTATGTTTTCTGAGTA+TGG | - | chr3_4:62585896-62585915 | Msa0512680:CDS | 35.0% |
| AGAAGAAAGGTTGGAACAAG+TGG | - | chr3_4:62582311-62582330 | Msa0512680:CDS | 40.0% | |
| TCTTGCTTCCACGTTACAAA+AGG | - | chr3_4:62582345-62582364 | Msa0512680:CDS | 40.0% | |
| AGGGAAGAAGAAGAAGAAGA+GGG | - | chr3_4:62582781-62582800 | Msa0512680:intron | 40.0% | |
| GAGGGAAGAAGAAGAAGAAA+AGG | - | chr3_4:62582799-62582818 | Msa0512680:intron | 40.0% | |
| CTTAGATCATACCAGTCCAT+TGG | + | chr3_4:62582858-62582877 | None:intergenic | 40.0% | |
| !! | CAATGGACTGGTATGATCTA+AGG | - | chr3_4:62582856-62582875 | Msa0512680:intron | 40.0% |
| GGGGTTAAAAACTAACGGAA+TGG | - | chr3_4:62582974-62582993 | Msa0512680:intron | 40.0% | |
| TGACTGACGGAGCATATTTA+AGG | - | chr3_4:62583004-62583023 | Msa0512680:intron | 40.0% | |
| GACTGACGGAGCATATTTAA+GGG | - | chr3_4:62583005-62583024 | Msa0512680:intron | 40.0% | |
| ! | GAGTCTTTGGAGAATGTCTT+TGG | + | chr3_4:62583204-62583223 | None:intergenic | 40.0% |
| TGAGGTTTGTGGTTTGAGTA+TGG | - | chr3_4:62583717-62583736 | Msa0512680:intron | 40.0% | |
| GAGGTTTGTGGTTTGAGTAT+GGG | - | chr3_4:62583718-62583737 | Msa0512680:intron | 40.0% | |
| ! | TTTTAGGCCCTTGACATGTA+TGG | - | chr3_4:62583838-62583857 | Msa0512680:intron | 40.0% |
| !! | AATGGTGTTGCTGAACATGT+TGG | - | chr3_4:62583874-62583893 | Msa0512680:intron | 40.0% |
| !! | ATGGTGTTGCTGAACATGTT+GGG | - | chr3_4:62583875-62583894 | Msa0512680:intron | 40.0% |
| CTTACAGGTAGAGGAAAAGA+TGG | + | chr3_4:62583955-62583974 | None:intergenic | 40.0% | |
| ! | CATCTTTTCCTCTACCTGTA+AGG | - | chr3_4:62583953-62583972 | Msa0512680:intron | 40.0% |
| ! | TCAAATAGCCTTACAGGTAG+AGG | + | chr3_4:62583964-62583983 | None:intergenic | 40.0% |
| ! | GAGTTGTCAAATAGCCTTAC+AGG | + | chr3_4:62583970-62583989 | None:intergenic | 40.0% |
| GGGTTAATATGCTATTGGGT+TGG | - | chr3_4:62584174-62584193 | Msa0512680:intron | 40.0% | |
| AAGAAAATATCGATCGAGCC+CGG | - | chr3_4:62584207-62584226 | Msa0512680:intron | 40.0% | |
| AAGACAAATCCTACGTCCAT+GGG | + | chr3_4:62584266-62584285 | None:intergenic | 40.0% | |
| TAAGACAAATCCTACGTCCA+TGG | + | chr3_4:62584267-62584286 | None:intergenic | 40.0% | |
| AAGGGAGATCAACTCAACAA+AGG | - | chr3_4:62584327-62584346 | Msa0512680:CDS | 40.0% | |
| GGATGCAAAATCTCCACAAA+TGG | + | chr3_4:62584377-62584396 | None:intergenic | 40.0% | |
| ! | GCAACTTTTGCAAACTTAGG+GGG | + | chr3_4:62584672-62584691 | None:intergenic | 40.0% |
| ! | CGCAACTTTTGCAAACTTAG+GGG | + | chr3_4:62584671-62584690 | None:intergenic | 40.0% |
| !! | CAGTAATTTTTGGACGAAGG+GGG | + | chr3_4:62584491-62584510 | None:intergenic | 40.0% |
| ! | GGCCTCTTCTCAGTAATTTT+TGG | + | chr3_4:62584501-62584520 | None:intergenic | 40.0% |
| TTAGTGACCCCCTATGTTTA+GGG | + | chr3_4:62584622-62584641 | None:intergenic | 40.0% | |
| ATTAGTGACCCCCTATGTTT+AGG | + | chr3_4:62584623-62584642 | None:intergenic | 40.0% | |
| ! | CGCAACTTTTGCAAACTTAG+GGG | - | chr3_4:62584671-62584690 | Msa0512680:intron | 40.0% |
| ! | GCAACTTTTGCAAACTTAGG+GGG | - | chr3_4:62584672-62584691 | Msa0512680:intron | 40.0% |
| AAACTTAGGGGGCAAAAAGT+GGG | - | chr3_4:62584683-62584702 | Msa0512680:intron | 40.0% | |
| ! | AAATCTATAAGGCTCGGTTG+TGG | + | chr3_4:62584727-62584746 | None:intergenic | 40.0% |
| !! | CCGAGCCTTATAGATTTTCA+AGG | - | chr3_4:62584730-62584749 | Msa0512680:intron | 40.0% |
| GACTTGTAGATTCGACAGTA+AGG | + | chr3_4:62584804-62584823 | None:intergenic | 40.0% | |
| AAAGTAGGCTTAGGTGGTTT+GGG | + | chr3_4:62584840-62584859 | None:intergenic | 40.0% | |
| !! | AGATGATGGAAAGTAGGCTT+AGG | + | chr3_4:62584849-62584868 | None:intergenic | 40.0% |
| TCCATCATCTTCTCTACCAT+AGG | - | chr3_4:62584859-62584878 | Msa0512680:intron | 40.0% | |
| ACCTATGGTAGAGAAGATGA+TGG | + | chr3_4:62584863-62584882 | None:intergenic | 40.0% | |
| AATGATCCCATCCTCCATTT+CGG | - | chr3_4:62585156-62585175 | Msa0512680:intron | 40.0% | |
| ACCATCAAATTCAAGCTGGA+TGG | + | chr3_4:62585182-62585201 | None:intergenic | 40.0% | |
| GTAGACCATCAAATTCAAGC+TGG | + | chr3_4:62585186-62585205 | None:intergenic | 40.0% | |
| GTTAATATCCCTCCAAGACT+TGG | - | chr3_4:62585390-62585409 | Msa0512680:CDS | 40.0% | |
| TGTATTCACCAAGTCTTGGA+GGG | + | chr3_4:62585401-62585420 | None:intergenic | 40.0% | |
| ATGTATTCACCAAGTCTTGG+AGG | + | chr3_4:62585402-62585421 | None:intergenic | 40.0% | |
| ! | AATACATCTTCTAGCTAGCC+TGG | - | chr3_4:62585415-62585434 | Msa0512680:CDS | 40.0% |
| AAAGAACCTCCGCTTTCTTA+TGG | - | chr3_4:62585654-62585673 | Msa0512680:intron | 40.0% | |
| ! | TCTAAGATGGCTGCCATTAA+TGG | - | chr3_4:62585769-62585788 | Msa0512680:intron | 40.0% |
| CTAAGATGGCTGCCATTAAT+GGG | - | chr3_4:62585770-62585789 | Msa0512680:intron | 40.0% | |
| !! | GGCTTGTTCTCTGGAATTCA+TGG | - | chr3_4:62582255-62582274 | Msa0512680:CDS | 45.0% |
| CGTGGAAGCAAGAATATCCT+GGG | + | chr3_4:62582338-62582357 | None:intergenic | 45.0% | |
| ACGTGGAAGCAAGAATATCC+TGG | + | chr3_4:62582339-62582358 | None:intergenic | 45.0% | |
| AGAAGCTATGTTGCGTGTGT+GGG | - | chr3_4:62582544-62582563 | Msa0512680:intron | 45.0% | |
| GAGGGAAGAAGAAGAAGAAG+AGG | - | chr3_4:62582780-62582799 | Msa0512680:intron | 45.0% | |
| TTCCGCTTACATGTCCAGAT+TGG | - | chr3_4:62583679-62583698 | Msa0512680:intron | 45.0% | |
| CTCCAATCTGGACATGTAAG+CGG | + | chr3_4:62583684-62583703 | None:intergenic | 45.0% | |
| TTGTATGTGGACGTAGGTAG+TGG | - | chr3_4:62584042-62584061 | Msa0512680:intron | 45.0% | |
| AGAAAATATCGATCGAGCCC+GGG | - | chr3_4:62584208-62584227 | Msa0512680:intron | 45.0% | |
| CAAAGAGGAACTCATTGCCA+TGG | - | chr3_4:62584302-62584321 | Msa0512680:CDS | 45.0% | |
| GAACTCATTGCCATGGCAAA+GGG | - | chr3_4:62584309-62584328 | Msa0512680:CDS | 45.0% | |
| AAACTTAGGGGGCAAAAGGT+GGG | + | chr3_4:62584420-62584439 | None:intergenic | 45.0% | |
| TTGCAAACTTAGGGGGCAAA+AGG | + | chr3_4:62584679-62584698 | None:intergenic | 45.0% | |
| CAAACTTAGGGGGCAAAAAG+TGG | - | chr3_4:62584682-62584701 | Msa0512680:intron | 45.0% | |
| GAAAGTAGGCTTAGGTGGTT+TGG | + | chr3_4:62584841-62584860 | None:intergenic | 45.0% | |
| TGATGGAAAGTAGGCTTAGG+TGG | + | chr3_4:62584846-62584865 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAGTT+GGG | + | chr3_4:62584895-62584914 | None:intergenic | 45.0% | |
| GTTGAATGTACGGTAAGACC+AGG | + | chr3_4:62584988-62585007 | None:intergenic | 45.0% | |
| GCCATCCAGCTTGAATTTGA+TGG | - | chr3_4:62585178-62585197 | Msa0512680:intron | 45.0% | |
| ATATTGGGCAGTTGTGTCTC+CGG | - | chr3_4:62585457-62585476 | Msa0512680:CDS | 45.0% | |
| TTCAGAGTCAGCTCTGCATT+TGG | + | chr3_4:62585636-62585655 | None:intergenic | 45.0% | |
| AATGATGTAGTTACCGCGGA+AGG | - | chr3_4:62585878-62585897 | Msa0512680:CDS | 45.0% | |
| CTCAGAAAACATACCTTCCG+CGG | + | chr3_4:62585894-62585913 | None:intergenic | 45.0% | |
| !! | TAAGATTAAAAAAATTAATA+AGG | - | chr3_4:62582909-62582928 | Msa0512680:intron | 5.0% |
| !! | TAAAATAAAATAAATTAATG+TGG | + | chr3_4:62583635-62583654 | None:intergenic | 5.0% |
| !!! | GTAAAAAATTAATTTTTTTT+GGG | + | chr3_4:62584152-62584171 | None:intergenic | 5.0% |
| CAGAAGCTATGTTGCGTGTG+TGG | - | chr3_4:62582543-62582562 | Msa0512680:intron | 50.0% | |
| CGCGTACTTCTTGAGGTTTG+TGG | - | chr3_4:62583706-62583725 | Msa0512680:intron | 50.0% | |
| ! | TATGTGGACGTAGGTAGTGG+CGG | - | chr3_4:62584045-62584064 | Msa0512680:intron | 50.0% |
| CATGCGCGCACAAGAATTCT+TGG | + | chr3_4:62584110-62584129 | None:intergenic | 50.0% | |
| ACAAATCCTACGTCCATGGG+CGG | + | chr3_4:62584263-62584282 | None:intergenic | 50.0% | |
| GGAACTCATTGCCATGGCAA+AGG | - | chr3_4:62584308-62584327 | Msa0512680:CDS | 50.0% | |
| ! | GAGTTGATCTCCCTTTGCCA+TGG | + | chr3_4:62584322-62584341 | None:intergenic | 50.0% |
| CAAACTTAGGGGGCAAAAGG+TGG | + | chr3_4:62584421-62584440 | None:intergenic | 50.0% | |
| AGGCCACGTGTCCCAAAAAA+GGG | - | chr3_4:62584516-62584535 | Msa0512680:intron | 50.0% | |
| GTTGGGGTATGTAGCACCTA+TGG | + | chr3_4:62584878-62584897 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGTTG+GGG | + | chr3_4:62584894-62584913 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGT+TGG | + | chr3_4:62584896-62584915 | None:intergenic | 50.0% | |
| ATGTTGAGCGGGACAAGTGT+TGG | + | chr3_4:62585066-62585085 | None:intergenic | 50.0% | |
| TTCAAGCTGGATGGCCGAAA+TGG | + | chr3_4:62585173-62585192 | None:intergenic | 50.0% | |
| AGAGTCAGCTCTGCATTTGG+AGG | + | chr3_4:62585633-62585652 | None:intergenic | 50.0% | |
| AGGTTGGAACAAGTGGACCC+AGG | - | chr3_4:62582318-62582337 | Msa0512680:CDS | 55.0% | |
| GAAGTACGCGCACTCCAATC+TGG | + | chr3_4:62583696-62583715 | None:intergenic | 55.0% | |
| TGGAGTGCGCGTACTTCTTG+AGG | - | chr3_4:62583699-62583718 | Msa0512680:intron | 55.0% | |
| GAGGCCACGTGTCCCAAAAA+AGG | - | chr3_4:62584515-62584534 | Msa0512680:intron | 55.0% | |
| GGCCACGTGTCCCAAAAAAG+GGG | - | chr3_4:62584517-62584536 | Msa0512680:intron | 55.0% | |
| !!! | AGCCCCTTTTTTGGGACACG+TGG | + | chr3_4:62584522-62584541 | None:intergenic | 55.0% |
| GGATGGCCGAAATGGAGGAT+GGG | + | chr3_4:62585165-62585184 | None:intergenic | 55.0% | |
| TGGATGGCCGAAATGGAGGA+TGG | + | chr3_4:62585166-62585185 | None:intergenic | 55.0% | |
| AAGCTGGATGGCCGAAATGG+AGG | + | chr3_4:62585170-62585189 | None:intergenic | 55.0% | |
| ATCGAGCCCGGGCGAGTGTC+CGG | - | chr3_4:62584219-62584238 | Msa0512680:intron | 70.0% | |
| GTGGCTCCGCCCATGGACGT+AGG | - | chr3_4:62584254-62584273 | Msa0512680:intron | 70.0% | |
| TCGAGCCCGGGCGAGTGTCC+GGG | - | chr3_4:62584220-62584239 | Msa0512680:intron | 75.0% | |
| CCATGGGCGGAGCCACCAGC+CGG | + | chr3_4:62584250-62584269 | None:intergenic | 75.0% | |
| ! | GCGAGCCCGGACACTCGCCC+GGG | + | chr3_4:62584228-62584247 | None:intergenic | 80.0% |
| ! | GGCGAGCCCGGACACTCGCC+CGG | + | chr3_4:62584229-62584248 | None:intergenic | 80.0% |
| ! | GGGCGAGTGTCCGGGCTCGC+CGG | - | chr3_4:62584228-62584247 | Msa0512680:intron | 80.0% |
| ! | GAGTGTCCGGGCTCGCCGGC+TGG | - | chr3_4:62584232-62584251 | Msa0512680:intron | 80.0% |
| !! | TGTCCGGGCTCGCCGGCTGG+TGG | - | chr3_4:62584235-62584254 | Msa0512680:intron | 80.0% |
| ! | GAGCCACCAGCCGGCGAGCC+CGG | + | chr3_4:62584241-62584260 | None:intergenic | 80.0% |
| ! | CCGGCTGGTGGCTCCGCCCA+TGG | - | chr3_4:62584247-62584266 | Msa0512680:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 62582253 | 62585991 | 62582253 | ID=Msa0512680;Name=Msa0512680 |
| chr3_4 | mRNA | 62582253 | 62585991 | 62582253 | ID=Msa0512680-mRNA-1;Parent=Msa0512680;Name=Msa0512680-mRNA-1;_AED=0.80;_eAED=0.84;_QI=0|0|0|0.42|1|1|7|0|262 |
| chr3_4 | exon | 62585878 | 62585991 | 62585878 | ID=Msa0512680-mRNA-1:exon:15555;Parent=Msa0512680-mRNA-1 |
| chr3_4 | exon | 62585379 | 62585509 | 62585379 | ID=Msa0512680-mRNA-1:exon:15554;Parent=Msa0512680-mRNA-1 |
| chr3_4 | exon | 62584524 | 62584578 | 62584524 | ID=Msa0512680-mRNA-1:exon:15553;Parent=Msa0512680-mRNA-1 |
| chr3_4 | exon | 62584275 | 62584400 | 62584275 | ID=Msa0512680-mRNA-1:exon:15552;Parent=Msa0512680-mRNA-1 |
| chr3_4 | exon | 62583896 | 62583968 | 62583896 | ID=Msa0512680-mRNA-1:exon:15551;Parent=Msa0512680-mRNA-1 |
| chr3_4 | exon | 62582562 | 62582619 | 62582562 | ID=Msa0512680-mRNA-1:exon:15550;Parent=Msa0512680-mRNA-1 |
| chr3_4 | exon | 62582253 | 62582484 | 62582253 | ID=Msa0512680-mRNA-1:exon:15549;Parent=Msa0512680-mRNA-1 |
| chr3_4 | CDS | 62585878 | 62585991 | 62585878 | ID=Msa0512680-mRNA-1:cds;Parent=Msa0512680-mRNA-1 |
| chr3_4 | CDS | 62585379 | 62585509 | 62585379 | ID=Msa0512680-mRNA-1:cds;Parent=Msa0512680-mRNA-1 |
| chr3_4 | CDS | 62584524 | 62584578 | 62584524 | ID=Msa0512680-mRNA-1:cds;Parent=Msa0512680-mRNA-1 |
| chr3_4 | CDS | 62584275 | 62584400 | 62584275 | ID=Msa0512680-mRNA-1:cds;Parent=Msa0512680-mRNA-1 |
| chr3_4 | CDS | 62583896 | 62583968 | 62583896 | ID=Msa0512680-mRNA-1:cds;Parent=Msa0512680-mRNA-1 |
| chr3_4 | CDS | 62582562 | 62582619 | 62582562 | ID=Msa0512680-mRNA-1:cds;Parent=Msa0512680-mRNA-1 |
| chr3_4 | CDS | 62582253 | 62582484 | 62582253 | ID=Msa0512680-mRNA-1:cds;Parent=Msa0512680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
