AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0512740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0512740 MtrunA17_Chr3g0120841 79.787 564 83 7 1 534 1 563 0.0 876
Msa0512740 MtrunA17_Chr3g0120201 98.113 265 5 0 271 535 1 265 0.0 529
Msa0512740 MtrunA17_Chr2g0290321 49.636 550 257 8 1 532 1 548 1.30e-173 501
Msa0512740 MtrunA17_Chr7g0239471 46.602 515 226 7 17 531 18 483 1.55e-145 427
Msa0512740 MtrunA17_Chr2g0290341 44.576 507 244 8 37 532 23 503 1.80e-137 407
Msa0512740 MtrunA17_Chr3g0120221 71.892 185 47 3 1 182 1 183 1.26e-90 276
Msa0512740 MtrunA17_Chr3g0120191 97.403 77 2 0 106 182 11 87 2.05e-49 166
Msa0512740 MtrunA17_Chr3g0120231 38.462 208 119 2 331 532 2 206 3.57e-41 147
Msa0512740 MtrunA17_Chr3g0120181 100.000 59 0 0 36 94 1 59 1.17e-40 140
Msa0512740 MtrunA17_Chr7g0238851 58.442 77 32 0 18 94 5 81 1.64e-24 98.2
Msa0512740 MtrunA17_Chr7g0233581 51.562 64 13 1 119 182 117 162 3.48e-11 62.8
Msa0512740 MtrunA17_Chr3g0124951 38.000 100 59 3 47 145 338 435 6.05e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0512740 AT3G07740.1 50.899 556 237 11 1 532 1 544 1.78e-174 504
Msa0512740 AT3G07740.4 50.266 563 237 12 1 532 1 551 1.47e-171 496
Msa0512740 AT4G16420.2 49.162 537 215 10 1 534 1 482 1.09e-168 486
Msa0512740 AT3G07740.3 51.737 518 218 9 36 532 17 523 4.21e-168 487
Msa0512740 AT4G16420.1 49.074 540 215 10 1 534 1 486 1.25e-167 484
Msa0512740 AT4G16420.3 47.681 539 223 8 1 534 1 485 1.65e-166 481
Msa0512740 AT3G07740.2 51.760 483 204 8 68 532 2 473 7.48e-155 451

Find 101 sgRNAs with CRISPR-Local

Find 567 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGCAGAAATGGAATTTA+AGG 0.163949 3_4:-62647466 Msa0512740:CDS
CAAAAGAATAAAAGACTTAA+AGG 0.230732 3_4:-62646859 Msa0512740:intron
TAGATATGCATCAGATTTCT+TGG 0.239365 3_4:+62645717 None:intergenic
GCTCGCATTGGAAGCCTTCT+TGG 0.245593 3_4:+62649016 None:intergenic
GAAAAGAAGCCTAAATTATC+TGG 0.247074 3_4:-62647579 Msa0512740:CDS
GTAGGATTTGTCTTATTCTA+TGG 0.253298 3_4:-62650284 Msa0512740:intron
TATGATATGCTTGTGGAAAA+AGG 0.255246 3_4:-62645658 Msa0512740:CDS
GCCATTGACATGCATGGATT+TGG 0.256378 3_4:-62650493 Msa0512740:CDS
CCTTAACTCCATCATTATTC+TGG 0.272285 3_4:+62648994 None:intergenic
TGCATAGAGTGCTTCTTTGT+TGG 0.282569 3_4:-62652001 Msa0512740:CDS
TCACATATTTGAAGCTCTTC+AGG 0.296633 3_4:+62646966 None:intergenic
ACATGCATGGATTTGGGAAT+TGG 0.309773 3_4:-62650486 Msa0512740:CDS
CTCTGCCTTCTTAGATTCTT+CGG 0.316463 3_4:+62649195 None:intergenic
TTGCATACCATAACCCGATA+TGG 0.348409 3_4:+62651947 None:intergenic
TTATATTCCCCAGATAATTT+AGG 0.358245 3_4:+62647570 None:intergenic
CCATTGACATGCATGGATTT+GGG 0.362070 3_4:-62650492 Msa0512740:CDS
CAATGATGCTGAGCAAGTTT+TGG 0.365626 3_4:-62647484 Msa0512740:CDS
TGTCTTTGTGATAGCTTGTA+TGG 0.382689 3_4:+62646059 None:intergenic
ATAAAAGCAATCATCCATAT+CGG 0.394474 3_4:-62651961 Msa0512740:CDS
AGAGTCAGCTCTGCATTTGA+AGG 0.397453 3_4:+62649326 None:intergenic
TTGCAGGAAGCTAGAATTGC+TGG 0.400705 3_4:-62646225 Msa0512740:intron
TATGGCTGGCGGTGCATCCT+TGG 0.406764 3_4:+62646077 None:intergenic
GGTGAGAGAAATTTCTCAAA+AGG 0.408187 3_4:+62646987 None:intergenic
ATCAATTTATTGAACAAAAG+AGG 0.414539 3_4:-62646179 Msa0512740:CDS
CAATCATCCATATCGGGTTA+TGG 0.423979 3_4:-62651954 Msa0512740:intron
TATAAAGAAAGTGGTCAGAT+TGG 0.427378 3_4:-62646132 Msa0512740:CDS
GAAGCCTTCTTGGTTATACT+TGG 0.427656 3_4:+62649026 None:intergenic
TAAATTCTGTCAATCTTGCT+TGG 0.438413 3_4:+62645679 None:intergenic
CCAGAATAATGATGGAGTTA+AGG 0.441442 3_4:-62648994 Msa0512740:CDS
CACAAAGACACTAGAAGAAT+GGG 0.442742 3_4:-62646046 Msa0512740:CDS
CCTCTCAACACTTCAATAGA+TGG 0.448042 3_4:+62647546 None:intergenic
GCTCATCTGCTCACGACAAC+AGG 0.449400 3_4:-62654632 Msa0512740:intron
TAGGATTTGTCTTATTCTAT+GGG 0.455897 3_4:-62650283 Msa0512740:CDS
TTCCGCTTACATCTTCAGAT+TGG 0.461749 3_4:-62650650 Msa0512740:CDS
TGAAGAGAAGTTACTTATTG+AGG 0.462048 3_4:-62650619 Msa0512740:intron
TCACAAAGACACTAGAAGAA+TGG 0.467289 3_4:-62646047 Msa0512740:CDS
ATCATTATTCTGGCTCGCAT+TGG 0.467715 3_4:+62649004 None:intergenic
AGAAATTTCTCAAAAGGATC+GGG 0.467873 3_4:+62646993 None:intergenic
TCAGATATACAACATTATAA+TGG 0.471496 3_4:+62650413 None:intergenic
TCTCAAGCAGGTTGGAGCAC+TGG 0.475857 3_4:-62647603 Msa0512740:CDS
CCGCGTAATGTTGAGGAAGA+TGG 0.476953 3_4:+62645774 None:intergenic
AAAAGAAGCCTAAATTATCT+GGG 0.481337 3_4:-62647578 Msa0512740:CDS
ACATCTTCAGATTGGAGTGC+AGG 0.490115 3_4:-62650642 Msa0512740:CDS
CCCAAATCCATGCATGTCAA+TGG 0.493456 3_4:+62650492 None:intergenic
GGCGGTGCATCCTTGGTACT+AGG 0.496097 3_4:+62646084 None:intergenic
AAAGAACCTCACCTTTCTGA+TGG 0.498619 3_4:-62649302 Msa0512740:CDS
GAGAAATTTCTCAAAAGGAT+CGG 0.500929 3_4:+62646992 None:intergenic
GATTTAGAAGCTTCATATGC+AGG 0.502552 3_4:-62652213 Msa0512740:intron
TTTGTGATAGCTTGTATGGC+TGG 0.504362 3_4:+62646063 None:intergenic
CCACTAATCAAAACATGTCT+AGG 0.504970 3_4:-62649171 Msa0512740:CDS
GAACTCCTTGCCATGGCAAA+GGG 0.508221 3_4:-62650247 Msa0512740:CDS
TTTACTTTATTCCATCAGAA+AGG 0.508668 3_4:+62649291 None:intergenic
CGCGTAATGTTGAGGAAGAT+GGG 0.509064 3_4:+62645775 None:intergenic
TCAAATAGCCTTACAGGTAG+AGG 0.513546 3_4:+62650376 None:intergenic
AGATGAGCGTGACGCGGCGC+GGG 0.514459 3_4:+62654647 None:intergenic
TAAAAGCAATCATCCATATC+GGG 0.518323 3_4:-62651960 Msa0512740:CDS
AAGATGTAAGCGGAAAAGAT+AGG 0.520508 3_4:+62650658 None:intergenic
TCAAATATGTGAACAGTACA+AGG 0.524557 3_4:-62646955 Msa0512740:CDS
CATGCAGTTAGAAATTTCAA+AGG 0.524634 3_4:-62645749 Msa0512740:CDS
CTATAGATTGTACCTGAGGT+TGG 0.525085 3_4:+62649148 None:intergenic
GGAACTCCTTGCCATGGCAA+AGG 0.542105 3_4:-62650248 Msa0512740:CDS
ATGCAGTTAGAAATTTCAAA+GGG 0.542710 3_4:-62645748 Msa0512740:CDS
CAAGGTAACTATAAAGAAAG+TGG 0.546753 3_4:-62646141 Msa0512740:CDS
AATGCGAGCCAGAATAATGA+TGG 0.549809 3_4:-62649002 Msa0512740:CDS
CAGAATTTATGATATGCTTG+TGG 0.553524 3_4:-62645665 Msa0512740:CDS
AACATGTCTAGGCCAACCTC+AGG 0.568912 3_4:-62649160 Msa0512740:intron
TCTTCCAAGTATAACCAAGA+AGG 0.569053 3_4:-62649030 Msa0512740:CDS
GAGTTGATGTCCCTTTGCCA+TGG 0.571402 3_4:+62650237 None:intergenic
ATGGTGTTGCTGAAAACGTT+GGG 0.572743 3_4:-62650462 Msa0512740:CDS
TTGTTAGTAGAATCTCAAGC+AGG 0.574478 3_4:-62647615 Msa0512740:intron
GATGTCCCTTTGCCATGGCA+AGG 0.577679 3_4:+62650242 None:intergenic
AAGGGACATCAACTCAAGAA+AGG 0.579536 3_4:-62650229 Msa0512740:intron
CAGCTCCGAAGAATCTAAGA+AGG 0.582538 3_4:-62649200 Msa0512740:CDS
AATGATGGAGTTAAGGTGGA+AGG 0.584215 3_4:-62648987 Msa0512740:intron
GAATAATGATGGAGTTAAGG+TGG 0.585712 3_4:-62648991 Msa0512740:CDS
AGTGGTCAGATTGGAACAAG+TGG 0.587270 3_4:-62646123 Msa0512740:CDS
CATCTATTGAAGTGTTGAGA+GGG 0.593154 3_4:-62647545 Msa0512740:CDS
GCATGATCCGCGTAATGTTG+AGG 0.597253 3_4:+62645767 None:intergenic
CATGGATTTGGGAATTGGAA+TGG 0.599035 3_4:-62650481 Msa0512740:CDS
TAGTAGAATCTCAAGCAGGT+TGG 0.601506 3_4:-62647611 Msa0512740:CDS
CAGATGAGCGTGACGCGGCG+CGG 0.601734 3_4:+62654646 None:intergenic
CCATCTATTGAAGTGTTGAG+AGG 0.602727 3_4:-62647546 Msa0512740:CDS
CTTACAGGTAGAGGAAAACA+TGG 0.611599 3_4:+62650385 None:intergenic
CCATCTTCCTCAACATTACG+CGG 0.613654 3_4:-62645774 Msa0512740:CDS
TGAACGTGAAATGAAACTGC+AGG 0.617265 3_4:-62647427 Msa0512740:CDS
CAAAGAGGAACTCCTTGCCA+TGG 0.618565 3_4:-62650254 Msa0512740:CDS
AGAATCATTTCCTAGTACCA+AGG 0.625963 3_4:-62646094 Msa0512740:CDS
TTTATTCCATCAGAAAGGTG+AGG 0.628847 3_4:+62649296 None:intergenic
AGGACAAAAGAAGCTGAACA+AGG 0.637958 3_4:-62646159 Msa0512740:CDS
GTGAGCAGATGAGCGTGACG+CGG 0.650772 3_4:+62654641 None:intergenic
TCACTCAAAAGAAGAGCATG+AGG 0.651691 3_4:-62646919 Msa0512740:CDS
TTCTATGGGAAAGAACAAAG+AGG 0.651784 3_4:-62650269 Msa0512740:CDS
CTCCAATCTGAAGATGTAAG+CGG 0.651949 3_4:+62650648 None:intergenic
GTGATAGCTTGTATGGCTGG+CGG 0.658411 3_4:+62646066 None:intergenic
AATGGTGTTGCTGAAAACGT+TGG 0.659458 3_4:-62650463 Msa0512740:CDS
AACAGTACAAGGTCTTCATG+CGG 0.668099 3_4:-62646944 Msa0512740:CDS
GCAGGCATGGGAATAACTGA+TGG 0.676294 3_4:-62652115 Msa0512740:intron
AAAGAAGCCTAAATTATCTG+GGG 0.686550 3_4:-62647577 Msa0512740:CDS
AGAGGGTACAATTCTAACAG+AGG 0.689534 3_4:-62647528 Msa0512740:CDS
ATGAAACTGCAGGTGCTCCG+TGG 0.711759 3_4:-62647417 Msa0512740:CDS
GTAATGTTGAGGAAGATGGG+TGG 0.746783 3_4:+62645778 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATGAATATATAATAATTT+AGG + chr3_4:62645832-62645851 None:intergenic 10.0%
!! AATTATTATATATTCATTCT+TGG - chr3_4:62645833-62645852 Msa0512740:intron 10.0%
!! AAAAATATAACAAACAAAAT+TGG + chr3_4:62646074-62646093 None:intergenic 10.0%
!! AACTAAAAAAAATATAATCT+AGG + chr3_4:62647922-62647941 None:intergenic 10.0%
!! GATTATTATTATTAAATCAA+TGG + chr3_4:62648832-62648851 None:intergenic 10.0%
!! GATTTAATAATAATAATCAA+AGG - chr3_4:62648834-62648853 Msa0512740:intron 10.0%
!!! TAAAATTTTATTACAAGAAA+AGG + chr3_4:62649059-62649078 None:intergenic 10.0%
!!! TAAAATATATTTCTTTTTAC+AGG - chr3_4:62649614-62649633 Msa0512740:intron 10.0%
!!! AATTTTGATAAAAAGAAATA+AGG + chr3_4:62649756-62649775 None:intergenic 10.0%
!!! TTATATGTTATTATTTTCTT+TGG - chr3_4:62650697-62650716 Msa0512740:intron 10.0%
!!! TAATATTGTTTTCTTTTATT+GGG + chr3_4:62652962-62652981 None:intergenic 10.0%
!!! TTAATATTGTTTTCTTTTAT+TGG + chr3_4:62652963-62652982 None:intergenic 10.0%
!! AAAAAAAAATCAGAAAGTTA+TGG + chr3_4:62645958-62645977 None:intergenic 15.0%
!!! ATATTTTTTTTATGCAAAAG+AGG - chr3_4:62646086-62646105 Msa0512740:CDS 15.0%
!!! ATTTTAAAATTTTCTCAGTT+TGG + chr3_4:62646346-62646365 None:intergenic 15.0%
!!! ATTTTGCTTTATTATTGAAT+TGG + chr3_4:62646522-62646541 None:intergenic 15.0%
!!! ATATATTTTCTCACATAAAA+GGG + chr3_4:62647533-62647552 None:intergenic 15.0%
!!! AATATATTTTCTCACATAAA+AGG + chr3_4:62647534-62647553 None:intergenic 15.0%
!!! TTTAAAACAAGTATGTAATA+GGG - chr3_4:62647597-62647616 Msa0512740:CDS 15.0%
!!! AAAAAATGTTTCGTTTTAAA+TGG - chr3_4:62648522-62648541 Msa0512740:intron 15.0%
!!! TAAAGAAATTATTTTGTTCA+TGG + chr3_4:62650629-62650648 None:intergenic 15.0%
!! TTTATATAATCAGAGTTAAT+CGG + chr3_4:62651039-62651058 None:intergenic 15.0%
!! CCAAAAAAAAAAAAAAAAAG+CGG + chr3_4:62651667-62651686 None:intergenic 15.0%
!! GTAATTATTATTAACCAAAT+CGG - chr3_4:62652306-62652325 Msa0512740:intron 15.0%
!! TAATTATTATTAACCAAATC+GGG - chr3_4:62652307-62652326 Msa0512740:intron 15.0%
!!! AAACGTTAAATTTTATATGA+CGG + chr3_4:62652556-62652575 None:intergenic 15.0%
!!! ATACAAGTTTTTATTACTTT+AGG - chr3_4:62653885-62653904 Msa0512740:intron 15.0%
!!! TGGCTTTTTAATTTTATTTT+TGG - chr3_4:62654393-62654412 Msa0512740:intron 15.0%
!!! TTTAATTTTATTTTTGGACA+AGG - chr3_4:62654399-62654418 Msa0512740:intron 15.0%
!! AAATTTCCTTAGCATATAAA+AGG + chr3_4:62645886-62645905 None:intergenic 20.0%
!!! AGTCGAATTATTAGTTTTAA+CGG + chr3_4:62646498-62646517 None:intergenic 20.0%
!! TAATTCTCTATTTAATAGCA+AGG + chr3_4:62646557-62646576 None:intergenic 20.0%
!!! CCATTTAACTTATTATTCTT+TGG + chr3_4:62646630-62646649 None:intergenic 20.0%
!! CCAAAGAATAATAAGTTAAA+TGG - chr3_4:62646627-62646646 Msa0512740:intron 20.0%
!!! TTTTATTTTTCTTATAGCTC+CGG - chr3_4:62647003-62647022 Msa0512740:CDS 20.0%
!!! ATTTTCTCTTGTTTTTTAAG+TGG - chr3_4:62647220-62647239 Msa0512740:intron 20.0%
!! AATATACATGAAATTCAACT+TGG + chr3_4:62647275-62647294 None:intergenic 20.0%
!!! GTTTAAAACAAGTATGTAAT+AGG - chr3_4:62647596-62647615 Msa0512740:CDS 20.0%
!!! TAAACTGTTTTTATCCAATA+AGG - chr3_4:62647721-62647740 Msa0512740:intron 20.0%
!! ATATTATGCAAATATTCACA+GGG + chr3_4:62647809-62647828 None:intergenic 20.0%
!! TGTGAATATTTGCATAATAT+CGG - chr3_4:62647809-62647828 Msa0512740:intron 20.0%
!! TACTGCAAAAAAAATATTTC+AGG - chr3_4:62648232-62648251 Msa0512740:intron 20.0%
!! ACTGCAAAAAAAATATTTCA+GGG - chr3_4:62648233-62648252 Msa0512740:intron 20.0%
!! TAACACAGTAATTATAAAAC+AGG + chr3_4:62648394-62648413 None:intergenic 20.0%
!!! CAATTTTATTTCAGAAAAGA+AGG + chr3_4:62648442-62648461 None:intergenic 20.0%
!!! CTTCTTTTCTGAAATAAAAT+TGG - chr3_4:62648440-62648459 Msa0512740:intron 20.0%
!!! GAAACATTTTTTTATCTGTT+TGG + chr3_4:62648514-62648533 None:intergenic 20.0%
!! ATAATAATAATCAAAGGCAA+TGG - chr3_4:62648840-62648859 Msa0512740:intron 20.0%
!! TCAGATATACAACATTATAA+TGG + chr3_4:62649889-62649908 None:intergenic 20.0%
!! TAAGTAGATTTCGTATTAAT+TGG - chr3_4:62650231-62650250 Msa0512740:CDS 20.0%
!! TCAATGGGTATAATTTATAT+GGG - chr3_4:62651219-62651238 Msa0512740:intron 20.0%
!! TTTGATTATAGTAGTACATA+TGG - chr3_4:62651525-62651544 Msa0512740:intron 20.0%
!!! CCGCTTTTTTTTTTTTTTTT+TGG - chr3_4:62651664-62651683 Msa0512740:intron 20.0%
!! AAGGAAATCTCTAAATATTT+AGG + chr3_4:62651846-62651865 None:intergenic 20.0%
!! TTATTGTATCTCTATAGTTA+AGG + chr3_4:62651865-62651884 None:intergenic 20.0%
!! AACTATAGAGATACAATAAT+TGG - chr3_4:62651866-62651885 Msa0512740:intron 20.0%
!! ACTATAGAGATACAATAATT+GGG - chr3_4:62651867-62651886 Msa0512740:intron 20.0%
!!! ACATCTGTCTTTTTTTAATT+TGG - chr3_4:62652371-62652390 Msa0512740:intron 20.0%
!!! TTTTTTTTTTAACTTTTCCC+TGG - chr3_4:62653047-62653066 Msa0512740:intron 20.0%
!!! TTTTTTTTTAACTTTTCCCT+GGG - chr3_4:62653048-62653067 Msa0512740:intron 20.0%
!! ATGTAAGTATGAAAATATCT+TGG - chr3_4:62653225-62653244 Msa0512740:intron 20.0%
!!! CTTTAAGTCTTTTATTCTTT+TGG + chr3_4:62653442-62653461 None:intergenic 20.0%
!! CAAAAGAATAAAAGACTTAA+AGG - chr3_4:62653440-62653459 Msa0512740:intron 20.0%
!!! TTATTTCCTCTAGTTTATAA+AGG - chr3_4:62653522-62653541 Msa0512740:intron 20.0%
!!! TATTTCCTCTAGTTTATAAA+GGG - chr3_4:62653523-62653542 Msa0512740:intron 20.0%
!! TGATTGATAAAATGAAAAAC+TGG + chr3_4:62653823-62653842 None:intergenic 20.0%
!!! AAGTTTTTATTACTTTAGGA+AGG - chr3_4:62653889-62653908 Msa0512740:intron 20.0%
!!! AGTTTTTATTACTTTAGGAA+GGG - chr3_4:62653890-62653909 Msa0512740:intron 20.0%
!! ATCAATTTATTGAACAAAAG+AGG - chr3_4:62654120-62654139 Msa0512740:intron 20.0%
!! AGATAAAAAGAAAAATGAAG+TGG + chr3_4:62654349-62654368 None:intergenic 20.0%
! TAGTATATAATTAGCGTTCA+TGG + chr3_4:62645757-62645776 None:intergenic 25.0%
! TATTCATTCTTGGTTGTAAT+AGG - chr3_4:62645843-62645862 Msa0512740:intron 25.0%
! ATTCATTCTTGGTTGTAATA+GGG - chr3_4:62645844-62645863 Msa0512740:intron 25.0%
! ACATAAACAAGAGAGAAAAT+TGG + chr3_4:62646035-62646054 None:intergenic 25.0%
! TTCAATTTCACCTCTTTATT+GGG + chr3_4:62646657-62646676 None:intergenic 25.0%
! TTTCAATTTCACCTCTTTAT+TGG + chr3_4:62646658-62646677 None:intergenic 25.0%
! AAAGAGGGAAATAAAATCAT+CGG - chr3_4:62646788-62646807 Msa0512740:intron 25.0%
!!! ATTCATTTTTGTTCAACTCA+AGG - chr3_4:62646956-62646975 Msa0512740:CDS 25.0%
! AGCTACATAAATACAATTTC+CGG + chr3_4:62647025-62647044 None:intergenic 25.0%
!! TTCCATATTAAATGTCACTT+GGG - chr3_4:62647104-62647123 Msa0512740:intron 25.0%
! GATATTATGCAAATATTCAC+AGG + chr3_4:62647810-62647829 None:intergenic 25.0%
! AAACAACATTACAACATATG+TGG + chr3_4:62648009-62648028 None:intergenic 25.0%
!! ATATAATATCGGTCTTTTGA+TGG + chr3_4:62648139-62648158 None:intergenic 25.0%
!! GGTGTTACAGAATATAATAT+CGG + chr3_4:62648150-62648169 None:intergenic 25.0%
! ATAAAAGCAATCATCCATAT+CGG - chr3_4:62648338-62648357 Msa0512740:intron 25.0%
! TTCAGAAAAGAAGGAAAAAA+AGG + chr3_4:62648433-62648452 None:intergenic 25.0%
!!! CTTTTCTGAAATAAAATTGG+AGG - chr3_4:62648443-62648462 Msa0512740:intron 25.0%
!!! GACTTGCGAATTTTTTATTA+TGG + chr3_4:62648716-62648735 None:intergenic 25.0%
!! CAAAGTACTATAAATGATCA+AGG - chr3_4:62648748-62648767 Msa0512740:intron 25.0%
! AAAACAGATTGTTAGTAACT+TGG - chr3_4:62649183-62649202 Msa0512740:CDS 25.0%
! ATATATCACTTCTCTCATAA+AGG - chr3_4:62649375-62649394 Msa0512740:intron 25.0%
! TATATCACTTCTCTCATAAA+GGG - chr3_4:62649376-62649395 Msa0512740:intron 25.0%
!! ATTCAGCTTTTATCTCATTA+TGG + chr3_4:62649467-62649486 None:intergenic 25.0%
! ATGCAAACAACATTTAACAA+TGG + chr3_4:62649728-62649747 None:intergenic 25.0%
!! TAGGATTTGTCTTATTCTAT+GGG - chr3_4:62650016-62650035 Msa0512740:intron 25.0%
! ATGATCTAAATCACAATTTG+TGG - chr3_4:62650104-62650123 Msa0512740:intron 25.0%
! AGAATAAAGAAATCAAGTCA+TGG + chr3_4:62650185-62650204 None:intergenic 25.0%
! TAAGTAAACAAATTCACAAG+TGG + chr3_4:62650377-62650396 None:intergenic 25.0%
! TACCACAATAATTTCAAAAG+AGG - chr3_4:62650395-62650414 Msa0512740:CDS 25.0%
!!! TACCTCTTTTGAAATTATTG+TGG + chr3_4:62650400-62650419 None:intergenic 25.0%
! GTAAAAATATGTAATCTGGA+TGG + chr3_4:62650603-62650622 None:intergenic 25.0%
! GCAAGTAAAAATATGTAATC+TGG + chr3_4:62650607-62650626 None:intergenic 25.0%
! TAACATATAAATGACTGCAT+AGG + chr3_4:62650687-62650706 None:intergenic 25.0%
!!! TTGTCTTGTTTTTAAGTGTT+GGG - chr3_4:62650834-62650853 Msa0512740:intron 25.0%
! TTTACTTTATTCCATCAGAA+AGG + chr3_4:62651011-62651030 None:intergenic 25.0%
! GTCAATGGGTATAATTTATA+TGG - chr3_4:62651218-62651237 Msa0512740:intron 25.0%
! TTCTTTAACATACCTGATAA+AGG - chr3_4:62651636-62651655 Msa0512740:intron 25.0%
! TCTTTAACATACCTGATAAA+GGG - chr3_4:62651637-62651656 Msa0512740:intron 25.0%
! TTATTTACTATGATTGCTTG+TGG - chr3_4:62651701-62651720 Msa0512740:intron 25.0%
!!! AGATTTGAGATCTTTTTCAA+AGG - chr3_4:62651816-62651835 Msa0512740:intron 25.0%
! CTATAGAGATACAATAATTG+GGG - chr3_4:62651868-62651887 Msa0512740:intron 25.0%
!! ATTTCGTTTTACCAAATTTC+AGG + chr3_4:62652035-62652054 None:intergenic 25.0%
! AACTCTTCTAACTAATCATT+AGG - chr3_4:62652231-62652250 Msa0512740:CDS 25.0%
! ATTAAAAAAAGACAGATGTC+AGG + chr3_4:62652370-62652389 None:intergenic 25.0%
! AAAAGAAGCCTAAATTATCT+GGG - chr3_4:62652721-62652740 Msa0512740:intron 25.0%
! TTATATTCCCCAGATAATTT+AGG + chr3_4:62652732-62652751 None:intergenic 25.0%
! CAATATTAACCATCTAGAAA+TGG - chr3_4:62652974-62652993 Msa0512740:intron 25.0%
!! AGTAACTCAACCTTTTATAT+GGG + chr3_4:62653708-62653727 None:intergenic 25.0%
!! TAGTAACTCAACCTTTTATA+TGG + chr3_4:62653709-62653728 None:intergenic 25.0%
! TTTGGCAAATCAATTATGAA+TGG + chr3_4:62653755-62653774 None:intergenic 25.0%
!!! TAATTGATTTGCCAAAATAG+AGG - chr3_4:62653759-62653778 Msa0512740:intron 25.0%
!!! GTTTTTATTACTTTAGGAAG+GGG - chr3_4:62653891-62653910 Msa0512740:intron 25.0%
!!! ATTTCTTTGTTAGCTTTGAT+TGG - chr3_4:62654373-62654392 Msa0512740:intron 25.0%
! ATGCAGTTAGAAATTTCAAA+GGG - chr3_4:62654551-62654570 Msa0512740:intron 25.0%
GCAAGTTTCATTTGATAAGA+TGG + chr3_4:62645735-62645754 None:intergenic 30.0%
! TACCATCCTTTTATATGCTA+AGG - chr3_4:62645877-62645896 Msa0512740:intron 30.0%
TTCCTTAGCATATAAAAGGA+TGG + chr3_4:62645882-62645901 None:intergenic 30.0%
TTGAACGTTGTTTGAGAATT+AGG - chr3_4:62645904-62645923 Msa0512740:intron 30.0%
TGAACGTTGTTTGAGAATTA+GGG - chr3_4:62645905-62645924 Msa0512740:intron 30.0%
!!! TTTTTTTTTGACTCAAGACC+AGG - chr3_4:62645988-62646007 Msa0512740:intron 30.0%
TCATAGTATACAAGAATTCC+TGG + chr3_4:62646009-62646028 None:intergenic 30.0%
TGACAAAACACTCTTATGAA+AGG + chr3_4:62646214-62646233 None:intergenic 30.0%
TTTGCTCTTGAGATCTTTAT+TGG - chr3_4:62646268-62646287 Msa0512740:intron 30.0%
!!! TGAGATCTTTATTGGCTTTT+AGG - chr3_4:62646276-62646295 Msa0512740:intron 30.0%
!!! GAGATCTTTATTGGCTTTTA+GGG - chr3_4:62646277-62646296 Msa0512740:intron 30.0%
! CTTGAGAGTTTTCTTAAACT+AGG - chr3_4:62646415-62646434 Msa0512740:intron 30.0%
TCTATTTAATAGCAAGGTTG+TGG + chr3_4:62646551-62646570 None:intergenic 30.0%
AAATGGTAATCCCAATAAAG+AGG - chr3_4:62646644-62646663 Msa0512740:intron 30.0%
TCCAATAGAGACTAAAGATT+CGG - chr3_4:62646713-62646732 Msa0512740:intron 30.0%
!!! GTGACTCTAGTTTTATAAGA+TGG + chr3_4:62646878-62646897 None:intergenic 30.0%
TAGAGTCACATGTTTATTGA+AGG - chr3_4:62646889-62646908 Msa0512740:CDS 30.0%
AAAACTTCAGTTAGATGTTG+TGG - chr3_4:62646979-62646998 Msa0512740:CDS 30.0%
! TATGTAGCTTCTAGTTACTA+CGG - chr3_4:62647036-62647055 Msa0512740:CDS 30.0%
GACATTTAATATGGAACTCA+GGG + chr3_4:62647100-62647119 None:intergenic 30.0%
TGACATTTAATATGGAACTC+AGG + chr3_4:62647101-62647120 None:intergenic 30.0%
GTTCCATATTAAATGTCACT+TGG - chr3_4:62647103-62647122 Msa0512740:intron 30.0%
TTTAGTGACTGGAAAACTAT+CGG - chr3_4:62647135-62647154 Msa0512740:intron 30.0%
AAACTATCGGTAATTATGAG+TGG - chr3_4:62647148-62647167 Msa0512740:intron 30.0%
! GACAATTTTGGATTACCTTT+AGG - chr3_4:62647336-62647355 Msa0512740:intron 30.0%
GTAAACAACTAAACACCTAA+AGG + chr3_4:62647354-62647373 None:intergenic 30.0%
GTTTACATGTTCTGTCAAAT+CGG - chr3_4:62647368-62647387 Msa0512740:intron 30.0%
! CGTTTAAGATAGACAATTAG+CGG - chr3_4:62647557-62647576 Msa0512740:CDS 30.0%
! GTTTAAGATAGACAATTAGC+GGG - chr3_4:62647558-62647577 Msa0512740:CDS 30.0%
!! GTTCGTCATTTTAGATATCA+TGG - chr3_4:62647693-62647712 Msa0512740:intron 30.0%
!!! ACTGTTTTTATCCAATAAGG+TGG - chr3_4:62647724-62647743 Msa0512740:intron 30.0%
AATAAAATTCATCCCTTAGC+AGG - chr3_4:62647853-62647872 Msa0512740:intron 30.0%
ATAAAATTCATCCCTTAGCA+GGG - chr3_4:62647854-62647873 Msa0512740:intron 30.0%
!! CAGAATTTTAATGCATCGAA+GGG + chr3_4:62647971-62647990 None:intergenic 30.0%
!! TTTCTTTGCTTTCTGCTTTT+AGG - chr3_4:62648030-62648049 Msa0512740:intron 30.0%
!! TTTTAGGTCCAAGAGAAAAA+AGG - chr3_4:62648046-62648065 Msa0512740:intron 30.0%
!! TATGGATGATTGCTTTTATG+AGG + chr3_4:62648337-62648356 None:intergenic 30.0%
TAAAAGCAATCATCCATATC+GGG - chr3_4:62648339-62648358 Msa0512740:intron 30.0%
ACTATAAATGATCAAGGTGA+CGG - chr3_4:62648754-62648773 Msa0512740:intron 30.0%
ACATGGTGAACTTAAAAGAT+TGG - chr3_4:62648780-62648799 Msa0512740:intron 30.0%
CTTAAAAGATTGGACTATCA+TGG - chr3_4:62648790-62648809 Msa0512740:intron 30.0%
! CAATGGATTTGTGAAATCAA+TGG - chr3_4:62648857-62648876 Msa0512740:intron 30.0%
! CAAAACATTTTCCTATTAGG+CGG + chr3_4:62648928-62648947 None:intergenic 30.0%
! CACCAAAACATTTTCCTATT+AGG + chr3_4:62648931-62648950 None:intergenic 30.0%
!! CTAATAGGAAAATGTTTTGG+TGG - chr3_4:62648929-62648948 Msa0512740:intron 30.0%
GATATTGTATGTCAGTATTG+TGG - chr3_4:62648991-62649010 Msa0512740:CDS 30.0%
CCTAAAAGAAAATGAAGAGT+CGG - chr3_4:62649082-62649101 Msa0512740:intron 30.0%
!!! TAGTGAAAAGTATTTTCCGA+GGG + chr3_4:62649282-62649301 None:intergenic 30.0%
!!! TTAGTGAAAAGTATTTTCCG+AGG + chr3_4:62649283-62649302 None:intergenic 30.0%
TAGCCATAAAGGGAATAAAT+AGG + chr3_4:62649444-62649463 None:intergenic 30.0%
CGTTAAAAGATACATGTATG+CGG + chr3_4:62649524-62649543 None:intergenic 30.0%
TGAAGAGAAGTTACTTATTG+AGG - chr3_4:62649680-62649699 Msa0512740:intron 30.0%
AAGTTACTTATTGAGGTATG+TGG - chr3_4:62649687-62649706 Msa0512740:intron 30.0%
!! TAACAAGCTTGTTTCGTTTT+AGG - chr3_4:62649784-62649803 Msa0512740:intron 30.0%
AATTGTTTGTATGTGTACGT+AGG - chr3_4:62649997-62650016 Msa0512740:intron 30.0%
! GTAGGATTTGTCTTATTCTA+TGG - chr3_4:62650015-62650034 Msa0512740:intron 30.0%
AAACAAATTCACCTTGTGAA+TGG + chr3_4:62650281-62650300 None:intergenic 30.0%
TGGGAAAGTTTGGTTATTAA+AGG - chr3_4:62650491-62650510 Msa0512740:CDS 30.0%
GGGAAAGTTTGGTTATTAAA+GGG - chr3_4:62650492-62650511 Msa0512740:CDS 30.0%
!!! TTTTACTGGTCACTTTTCTT+TGG - chr3_4:62650793-62650812 Msa0512740:intron 30.0%
ACTTAAAAACAAGACAAGCA+GGG + chr3_4:62650831-62650850 None:intergenic 30.0%
!!! CTTGTCTTGTTTTTAAGTGT+TGG - chr3_4:62650833-62650852 Msa0512740:intron 30.0%
!!! TGTCTTGTTTTTAAGTGTTG+GGG - chr3_4:62650835-62650854 Msa0512740:intron 30.0%
GCAAAATGCAACCAAAAAAT+CGG + chr3_4:62650880-62650899 None:intergenic 30.0%
! TTTTGCAATGTCAAGTTTCA+TGG - chr3_4:62650894-62650913 Msa0512740:intron 30.0%
TCTGCATGAAAAACATAACA+TGG + chr3_4:62650949-62650968 None:intergenic 30.0%
TAGTGACATTCTATGTCAAT+GGG - chr3_4:62651204-62651223 Msa0512740:intron 30.0%
!!! TCTTATTTTGTTGCTGATGT+AGG - chr3_4:62651342-62651361 Msa0512740:intron 30.0%
AATCAAAAGATTATCGCTCA+TGG + chr3_4:62651512-62651531 None:intergenic 30.0%
ATTTAATCCTGAACAGACTA+TGG - chr3_4:62651725-62651744 Msa0512740:intron 30.0%
TTTAATCCTGAACAGACTAT+GGG - chr3_4:62651726-62651745 Msa0512740:intron 30.0%
GGTAAAACGAAATTTCTGAT+AGG - chr3_4:62652042-62652061 Msa0512740:CDS 30.0%
! CGTTATTCTGTTACTTATCT+AGG - chr3_4:62652278-62652297 Msa0512740:intron 30.0%
! TTTTCATGTGCTTACTTAAC+TGG - chr3_4:62652601-62652620 Msa0512740:intron 30.0%
TGCTTACTTAACTGGTAAAT+TGG - chr3_4:62652609-62652628 Msa0512740:intron 30.0%
GAAAAGAAGCCTAAATTATC+TGG - chr3_4:62652720-62652739 Msa0512740:intron 30.0%
AAAGAAGCCTAAATTATCTG+GGG - chr3_4:62652722-62652741 Msa0512740:intron 30.0%
TTTGGCAGAAATGGAATTTA+AGG - chr3_4:62652833-62652852 Msa0512740:intron 30.0%
! AAATGGTCTTGGAAACAATA+TGG - chr3_4:62652991-62653010 Msa0512740:intron 30.0%
! TGAATTTTAAGCAGCAAACT+TGG - chr3_4:62653119-62653138 Msa0512740:intron 30.0%
!! TCCTGTATACTGTTTCTTTT+AGG - chr3_4:62653161-62653180 Msa0512740:intron 30.0%
TCCTAAAAGAAACAGTATAC+AGG + chr3_4:62653165-62653184 None:intergenic 30.0%
AAGTATGAAAATATCTTGGC+AGG - chr3_4:62653229-62653248 Msa0512740:intron 30.0%
AGAAATTTCTCAAAAGGATC+GGG + chr3_4:62653309-62653328 None:intergenic 30.0%
GAGAAATTTCTCAAAAGGAT+CGG + chr3_4:62653310-62653329 None:intergenic 30.0%
TCAAATATGTGAACAGTACA+AGG - chr3_4:62653344-62653363 Msa0512740:intron 30.0%
! CTTTTATTCTTTTGGCAAGT+CGG + chr3_4:62653434-62653453 None:intergenic 30.0%
!! CATACTACTTTTCAGTTTCA+AGG + chr3_4:62653636-62653655 None:intergenic 30.0%
! TTTTATATGGGGACTTCTAT+GGG + chr3_4:62653696-62653715 None:intergenic 30.0%
! GTAACTCAACCTTTTATATG+GGG + chr3_4:62653707-62653726 None:intergenic 30.0%
!! TCAATTATGAATGGACTATG+TGG + chr3_4:62653746-62653765 None:intergenic 30.0%
TAACTGATATAGTTTGACCA+AGG + chr3_4:62653992-62654011 None:intergenic 30.0%
CAAGATATTGCAAATGGAAA+TGG + chr3_4:62654057-62654076 None:intergenic 30.0%
CAAGGTAACTATAAAGAAAG+TGG - chr3_4:62654158-62654177 Msa0512740:intron 30.0%
TATAAAGAAAGTGGTCAGAT+TGG - chr3_4:62654167-62654186 Msa0512740:intron 30.0%
! TGGGATATTAGTGATTTTGA+AGG - chr3_4:62654272-62654291 Msa0512740:intron 30.0%
! GGGATATTAGTGATTTTGAA+GGG - chr3_4:62654273-62654292 Msa0512740:intron 30.0%
!! GGATATTAGTGATTTTGAAG+GGG - chr3_4:62654274-62654293 Msa0512740:intron 30.0%
! TGTAAGAAAATTTTCTCCCT+TGG - chr3_4:62654316-62654335 Msa0512740:intron 30.0%
ATGAAGTGGTAAAAAACCAA+GGG + chr3_4:62654335-62654354 None:intergenic 30.0%
AATGAAGTGGTAAAAAACCA+AGG + chr3_4:62654336-62654355 None:intergenic 30.0%
CATGCAGTTAGAAATTTCAA+AGG - chr3_4:62654550-62654569 Msa0512740:intron 30.0%
TAGATATGCATCAGATTTCT+TGG + chr3_4:62654585-62654604 None:intergenic 30.0%
TAAATTCTGTCAATCTTGCT+TGG + chr3_4:62654623-62654642 None:intergenic 30.0%
CAGAATTTATGATATGCTTG+TGG - chr3_4:62654634-62654653 Msa0512740:CDS 30.0%
TATGATATGCTTGTGGAAAA+AGG - chr3_4:62654641-62654660 Msa0512740:CDS 30.0%
TTATGTGGTCTGATATGAGA+AGG - chr3_4:62646122-62646141 Msa0512740:CDS 35.0%
! ATATTTAGCGAGAGCGTAAA+AGG - chr3_4:62646153-62646172 Msa0512740:CDS 35.0%
!!! TGGCTTTTAGGGTTTGATTT+TGG - chr3_4:62646288-62646307 Msa0512740:intron 35.0%
!! GTTTGATTTTGGAGAAGAGA+TGG - chr3_4:62646299-62646318 Msa0512740:intron 35.0%
!! ATTTTGGAGAAGAGATGGAA+GGG - chr3_4:62646304-62646323 Msa0512740:intron 35.0%
AGAAAACTCTCAAGTTCAAC+AGG + chr3_4:62646409-62646428 None:intergenic 35.0%
!! TACGTCTACGTGTCATTTAA+AGG + chr3_4:62646467-62646486 None:intergenic 35.0%
TCCGAATCTTTAGTCTCTAT+TGG + chr3_4:62646717-62646736 None:intergenic 35.0%
TTCTAACTGAGGTTGAAAGA+GGG - chr3_4:62646773-62646792 Msa0512740:intron 35.0%
! ATGTAGCTTCTAGTTACTAC+GGG - chr3_4:62647037-62647056 Msa0512740:CDS 35.0%
CTCCCAAGTGACATTTAATA+TGG + chr3_4:62647109-62647128 None:intergenic 35.0%
! TATTAAATGTCACTTGGGAG+AGG - chr3_4:62647109-62647128 Msa0512740:intron 35.0%
! ATTAAATGTCACTTGGGAGA+GGG - chr3_4:62647110-62647129 Msa0512740:intron 35.0%
!!! TCTTGTTTTTTAAGTGGCCT+AGG - chr3_4:62647226-62647245 Msa0512740:intron 35.0%
TTTGACCTATAGCACAGTAA+AGG + chr3_4:62647252-62647271 None:intergenic 35.0%
! AATGAGGCAACAGACAATTT+TGG - chr3_4:62647324-62647343 Msa0512740:intron 35.0%
! AGAAGATTTTCCAAGCGTAT+AGG - chr3_4:62647394-62647413 Msa0512740:intron 35.0%
! AAGCGTATAGGTTTGTTCAT+GGG - chr3_4:62647406-62647425 Msa0512740:CDS 35.0%
CAAGGTGTATAGTACAAAGT+GGG - chr3_4:62647439-62647458 Msa0512740:CDS 35.0%
GTACAAAGTGGGAAAGTTAT+AGG - chr3_4:62647450-62647469 Msa0512740:CDS 35.0%
AGGCATACATGGTTTATTAC+AGG - chr3_4:62647671-62647690 Msa0512740:intron 35.0%
TGAAAATGCAACCACCTTAT+TGG + chr3_4:62647738-62647757 None:intergenic 35.0%
! AATAAGGTGGTTGCATTTTC+AGG - chr3_4:62647737-62647756 Msa0512740:intron 35.0%
TAAAATTCATCCCTTAGCAG+GGG - chr3_4:62647855-62647874 Msa0512740:intron 35.0%
!! GCAGAATTTTAATGCATCGA+AGG + chr3_4:62647972-62647991 None:intergenic 35.0%
!!! TAAAGCAGCCTTTTTTCTCT+TGG + chr3_4:62648057-62648076 None:intergenic 35.0%
GATTTAGAAGCTTCATATGC+AGG - chr3_4:62648086-62648105 Msa0512740:intron 35.0%
TGCCTGCAACATTTAGAAAA+CGG + chr3_4:62648171-62648190 None:intergenic 35.0%
! TTTTCTAAATGTTGCAGGCA+TGG - chr3_4:62648171-62648190 Msa0512740:intron 35.0%
TTTCTAAATGTTGCAGGCAT+GGG - chr3_4:62648172-62648191 Msa0512740:intron 35.0%
TGGAGGAATGTACAATATCT+AGG - chr3_4:62648460-62648479 Msa0512740:intron 35.0%
GGAGGAATGTACAATATCTA+GGG - chr3_4:62648461-62648480 Msa0512740:intron 35.0%
! GTTTGGCCAATAACATTTTG+TGG + chr3_4:62648497-62648516 None:intergenic 35.0%
! CGCCTAATAGGAAAATGTTT+TGG - chr3_4:62648926-62648945 Msa0512740:intron 35.0%
!!! AATGTTTTGGTGGTTGTTGT+TGG - chr3_4:62648939-62648958 Msa0512740:intron 35.0%
TTGTATGTCAGTATTGTGGA+TGG - chr3_4:62648995-62649014 Msa0512740:CDS 35.0%
TGTATGTCAGTATTGTGGAT+GGG - chr3_4:62648996-62649015 Msa0512740:CDS 35.0%
! CCGACTCTTCATTTTCTTTT+AGG + chr3_4:62649085-62649104 None:intergenic 35.0%
CTAGATATGAAGTCCTTTGA+TGG - chr3_4:62649142-62649161 Msa0512740:intron 35.0%
ATATTGTGCAGCATCACATT+AGG - chr3_4:62649239-62649258 Msa0512740:intron 35.0%
! TGATAGCTATTCTTTTCCCT+CGG - chr3_4:62649263-62649282 Msa0512740:intron 35.0%
GAAATGGCTTAAGTCAGAAA+TGG + chr3_4:62649321-62649340 None:intergenic 35.0%
GCATATCTGATTAAAGCACA+TGG + chr3_4:62649353-62649372 None:intergenic 35.0%
CCATAAAGGGAATAAATAGG+AGG + chr3_4:62649441-62649460 None:intergenic 35.0%
CCTCCTATTTATTCCCTTTA+TGG - chr3_4:62649438-62649457 Msa0512740:intron 35.0%
CTCATTATGGTAGCCATAAA+GGG + chr3_4:62649454-62649473 None:intergenic 35.0%
TCTCATTATGGTAGCCATAA+AGG + chr3_4:62649455-62649474 None:intergenic 35.0%
! CATGTATCTTTTAACGTCGA+AGG - chr3_4:62649528-62649547 Msa0512740:intron 35.0%
TTTGAATGAAGTTTCCAGCA+TGG - chr3_4:62649565-62649584 Msa0512740:intron 35.0%
TTACACAAATTCATCCATGC+TGG + chr3_4:62649582-62649601 None:intergenic 35.0%
AAGATGTAAGCGGAAAAGAT+AGG + chr3_4:62649644-62649663 None:intergenic 35.0%
! AAGTTGTCAAATAGCCTTAC+AGG + chr3_4:62649932-62649951 None:intergenic 35.0%
TTCTATGGGAAAGAACAAAG+AGG - chr3_4:62650030-62650049 Msa0512740:intron 35.0%
TTATTCCAATGCCATTCACA+AGG - chr3_4:62650267-62650286 Msa0512740:CDS 35.0%
TCTTGCATGTTGGAAGATAT+TGG - chr3_4:62650424-62650443 Msa0512740:CDS 35.0%
AACCAAACTTTCCCAAAACT+GGG + chr3_4:62650486-62650505 None:intergenic 35.0%
TAACCAAACTTTCCCAAAAC+TGG + chr3_4:62650487-62650506 None:intergenic 35.0%
!!! CTAACTTGTGCTTGTTTTAC+TGG - chr3_4:62650779-62650798 Msa0512740:intron 35.0%
CACTTAAAAACAAGACAAGC+AGG + chr3_4:62650832-62650851 None:intergenic 35.0%
!!! TTCTGTACTCTCCGATTTTT+TGG - chr3_4:62650866-62650885 Msa0512740:intron 35.0%
TTTATTCCATCAGAAAGGTG+AGG + chr3_4:62651006-62651025 None:intergenic 35.0%
ATAATCAGAGTTAATCGGAG+TGG + chr3_4:62651034-62651053 None:intergenic 35.0%
!!! CCTAGACATGTTTTGATTAG+TGG + chr3_4:62651131-62651150 None:intergenic 35.0%
CCACTAATCAAAACATGTCT+AGG - chr3_4:62651128-62651147 Msa0512740:intron 35.0%
TAAGCTATAGATTGTACCTG+AGG + chr3_4:62651158-62651177 None:intergenic 35.0%
CATAGAATGTCACTACGAAA+TGG + chr3_4:62651199-62651218 None:intergenic 35.0%
GTAGTGACATTCTATGTCAA+TGG - chr3_4:62651203-62651222 Msa0512740:intron 35.0%
TCTTCCAAGTATAACCAAGA+AGG - chr3_4:62651269-62651288 Msa0512740:intron 35.0%
CCTTAACTCCATCATTATTC+TGG + chr3_4:62651308-62651327 None:intergenic 35.0%
! CCAGAATAATGATGGAGTTA+AGG - chr3_4:62651305-62651324 Msa0512740:intron 35.0%
! GAATAATGATGGAGTTAAGG+TGG - chr3_4:62651308-62651327 Msa0512740:intron 35.0%
GAACGTTCAACAACATTAAC+TGG + chr3_4:62651592-62651611 None:intergenic 35.0%
CCTGTTGTATCTTGTACTTA+GGG + chr3_4:62651912-62651931 None:intergenic 35.0%
CCTAAGTACAAGATACAACA+GGG - chr3_4:62651910-62651929 Msa0512740:intron 35.0%
ATTCAACTGGACCTGAAATT+TGG - chr3_4:62652021-62652040 Msa0512740:CDS 35.0%
ATCAATGTGATACGAGATCA+GGG - chr3_4:62652085-62652104 Msa0512740:CDS 35.0%
TGAACGTAGAATGGAAATAC+TGG - chr3_4:62652109-62652128 Msa0512740:CDS 35.0%
!!! GAGTTAGTCCGTTTTTTAGA+GGG + chr3_4:62652216-62652235 None:intergenic 35.0%
!!! AGAGTTAGTCCGTTTTTTAG+AGG + chr3_4:62652217-62652236 None:intergenic 35.0%
TTGTTAGTAGAATCTCAAGC+AGG - chr3_4:62652684-62652703 Msa0512740:intron 35.0%
!! CATCTATTGAAGTGTTGAGA+GGG - chr3_4:62652754-62652773 Msa0512740:intron 35.0%
!!! CTTACTTTTTTCTGTAGCCA+CGG + chr3_4:62652902-62652921 None:intergenic 35.0%
GTGGCTACAGAAAAAAGTAA+GGG - chr3_4:62652901-62652920 Msa0512740:intron 35.0%
TAACCATCTAGAAATGGTCT+TGG - chr3_4:62652980-62652999 Msa0512740:intron 35.0%
! TTTCCAAGACCATTTCTAGA+TGG + chr3_4:62652986-62653005 None:intergenic 35.0%
TGACATGTTAACTCAGAATC+AGG + chr3_4:62653078-62653097 None:intergenic 35.0%
GGTGAGAGAAATTTCTCAAA+AGG + chr3_4:62653315-62653334 None:intergenic 35.0%
! TCACATATTTGAAGCTCTTC+AGG + chr3_4:62653336-62653355 None:intergenic 35.0%
! TTCCTCTAGTTTATAAAGGG+TGG - chr3_4:62653526-62653545 Msa0512740:intron 35.0%
! TACTTTTCAGTTTCAAGGTG+GGG + chr3_4:62653631-62653650 None:intergenic 35.0%
!! CTACTTTTCAGTTTCAAGGT+GGG + chr3_4:62653632-62653651 None:intergenic 35.0%
!! ACTACTTTTCAGTTTCAAGG+TGG + chr3_4:62653633-62653652 None:intergenic 35.0%
AGTAGTATGTTGCATTTGAC+TGG - chr3_4:62653647-62653666 Msa0512740:intron 35.0%
GTAGTATGTTGCATTTGACT+GGG - chr3_4:62653648-62653667 Msa0512740:intron 35.0%
! CTTTTATATGGGGACTTCTA+TGG + chr3_4:62653697-62653716 None:intergenic 35.0%
CATAGAAGTCCCCATATAAA+AGG - chr3_4:62653695-62653714 Msa0512740:intron 35.0%
TTCCATTTGCAATATCTTGC+AGG - chr3_4:62654058-62654077 Msa0512740:intron 35.0%
TTCCTGCAAGATATTGCAAA+TGG + chr3_4:62654063-62654082 None:intergenic 35.0%
AGAATCATTTCCTAGTACCA+AGG - chr3_4:62654205-62654224 Msa0512740:intron 35.0%
! TGTCTTTGTGATAGCTTGTA+TGG + chr3_4:62654243-62654262 None:intergenic 35.0%
TCACAAAGACACTAGAAGAA+TGG - chr3_4:62654252-62654271 Msa0512740:intron 35.0%
CACAAAGACACTAGAAGAAT+GGG - chr3_4:62654253-62654272 Msa0512740:intron 35.0%
!! TATGGCATTGATTAACATGC+AGG - chr3_4:62654466-62654485 Msa0512740:intron 35.0%
CTTGGTTGTAATAGGGATCA+AGG - chr3_4:62645851-62645870 Msa0512740:intron 40.0%
!! TGCAAAAGAGGAGTACTAGT+AGG - chr3_4:62646098-62646117 Msa0512740:CDS 40.0%
! GGAGTACTAGTAGGTTTATG+TGG - chr3_4:62646107-62646126 Msa0512740:CDS 40.0%
!! GATTTTGGAGAAGAGATGGA+AGG - chr3_4:62646303-62646322 Msa0512740:intron 40.0%
!! TTTTGGAGAAGAGATGGAAG+GGG - chr3_4:62646305-62646324 Msa0512740:intron 40.0%
GTTCTAACTGAGGTTGAAAG+AGG - chr3_4:62646772-62646791 Msa0512740:intron 40.0%
GAGGGAAATAAAATCATCGG+AGG - chr3_4:62646791-62646810 Msa0512740:intron 40.0%
TTGCGCAGTAAAATGGGAAA+TGG + chr3_4:62646920-62646939 None:intergenic 40.0%
ACACAGTTGCGCAGTAAAAT+GGG + chr3_4:62646926-62646945 None:intergenic 40.0%
AACACAGTTGCGCAGTAAAA+TGG + chr3_4:62646927-62646946 None:intergenic 40.0%
! TTAAATGTCACTTGGGAGAG+GGG - chr3_4:62647111-62647130 Msa0512740:intron 40.0%
AATTGTCTGTTGCCTCATTG+TGG + chr3_4:62647323-62647342 None:intergenic 40.0%
CATGAACAAACCTATACGCT+TGG + chr3_4:62647407-62647426 None:intergenic 40.0%
! CAAGCGTATAGGTTTGTTCA+TGG - chr3_4:62647405-62647424 Msa0512740:CDS 40.0%
TTCATGGGTTTCAACTTCCA+AGG - chr3_4:62647421-62647440 Msa0512740:CDS 40.0%
CCACTTTGTACTATACACCT+TGG + chr3_4:62647441-62647460 None:intergenic 40.0%
CCAAGGTGTATAGTACAAAG+TGG - chr3_4:62647438-62647457 Msa0512740:CDS 40.0%
TCTTACATGCATCAGCTTTG+AGG - chr3_4:62647651-62647670 Msa0512740:intron 40.0%
! CACCGTTTTCTAAATGTTGC+AGG - chr3_4:62648166-62648185 Msa0512740:intron 40.0%
! TGCATAGAGTGCTTCTTTGT+TGG - chr3_4:62648298-62648317 Msa0512740:intron 40.0%
CAATCATCCATATCGGGTTA+TGG - chr3_4:62648345-62648364 Msa0512740:intron 40.0%
TTGCATACCATAACCCGATA+TGG + chr3_4:62648355-62648374 None:intergenic 40.0%
GGAATGTACAATATCTAGGG+TGG - chr3_4:62648464-62648483 Msa0512740:intron 40.0%
! ATGTACAATATCTAGGGTGG+AGG - chr3_4:62648467-62648486 Msa0512740:intron 40.0%
! TGTACAATATCTAGGGTGGA+GGG - chr3_4:62648468-62648487 Msa0512740:intron 40.0%
GGGAGACCACAAAATGTTAT+TGG - chr3_4:62648488-62648507 Msa0512740:intron 40.0%
ATCCAAGTTCACCTAAGGAT+CGG + chr3_4:62648584-62648603 None:intergenic 40.0%
TTACGATCCAAGTTCACCTA+AGG + chr3_4:62648589-62648608 None:intergenic 40.0%
TATGTTTCTTGCCGCCTAAT+AGG - chr3_4:62648914-62648933 Msa0512740:intron 40.0%
AAAGAAAATGAAGAGTCGGC+AGG - chr3_4:62649086-62649105 Msa0512740:intron 40.0%
CAGCAAATCATCACCATCAA+AGG + chr3_4:62649158-62649177 None:intergenic 40.0%
CACATGGAACAAGTCAGAAA+TGG + chr3_4:62649337-62649356 None:intergenic 40.0%
TTCCGCTTACATCTTCAGAT+TGG - chr3_4:62649649-62649668 Msa0512740:intron 40.0%
CTCCAATCTGAAGATGTAAG+CGG + chr3_4:62649654-62649673 None:intergenic 40.0%
AGGTATGTGGTCTGAGTATA+GGG - chr3_4:62649700-62649719 Msa0512740:intron 40.0%
! TTTTAGGCCATTGACATGCA+TGG - chr3_4:62649800-62649819 Msa0512740:intron 40.0%
CCATTGACATGCATGGATTT+GGG - chr3_4:62649807-62649826 Msa0512740:intron 40.0%
ACATGCATGGATTTGGGAAT+TGG - chr3_4:62649813-62649832 Msa0512740:intron 40.0%
CATGGATTTGGGAATTGGAA+TGG - chr3_4:62649818-62649837 Msa0512740:intron 40.0%
!! AATGGTGTTGCTGAAAACGT+TGG - chr3_4:62649836-62649855 Msa0512740:intron 40.0%
!! ATGGTGTTGCTGAAAACGTT+GGG - chr3_4:62649837-62649856 Msa0512740:intron 40.0%
CTTACAGGTAGAGGAAAACA+TGG + chr3_4:62649917-62649936 None:intergenic 40.0%
! CATGTTTTCCTCTACCTGTA+AGG - chr3_4:62649915-62649934 Msa0512740:intron 40.0%
! TCAAATAGCCTTACAGGTAG+AGG + chr3_4:62649926-62649945 None:intergenic 40.0%
TACGACATGCATTCAAACAC+AGG + chr3_4:62649978-62649997 None:intergenic 40.0%
AAGGGACATCAACTCAAGAA+AGG - chr3_4:62650070-62650089 Msa0512740:intron 40.0%
ATTCACCTTGTGAATGGCAT+TGG + chr3_4:62650275-62650294 None:intergenic 40.0%
CAAATTCACAAGTGGACAGT+GGG + chr3_4:62650369-62650388 None:intergenic 40.0%
ACAAATTCACAAGTGGACAG+TGG + chr3_4:62650370-62650389 None:intergenic 40.0%
GAGGTATATGTCTTGCATGT+TGG - chr3_4:62650414-62650433 Msa0512740:CDS 40.0%
GTAGTTTCACTGACAGAATC+TGG - chr3_4:62650459-62650478 Msa0512740:CDS 40.0%
TCCACGTCATAAATCTGTAG+TGG + chr3_4:62650577-62650596 None:intergenic 40.0%
GACAGCGTTTGTAAAATCTG+AGG - chr3_4:62650748-62650767 Msa0512740:intron 40.0%
AAAGAACCTCACCTTTCTGA+TGG - chr3_4:62650997-62651016 Msa0512740:intron 40.0%
GTTTATGACCGCTAATCCTT+TGG - chr3_4:62651066-62651085 Msa0512740:intron 40.0%
ATGTTGCACCAAAGGATTAG+CGG + chr3_4:62651077-62651096 None:intergenic 40.0%
CTCTGCCTTCTTAGATTCTT+CGG + chr3_4:62651107-62651126 None:intergenic 40.0%
CTATAGATTGTACCTGAGGT+TGG + chr3_4:62651154-62651173 None:intergenic 40.0%
GAAGCCTTCTTGGTTATACT+TGG + chr3_4:62651276-62651295 None:intergenic 40.0%
!! ATCATTATTCTGGCTCGCAT+TGG + chr3_4:62651298-62651317 None:intergenic 40.0%
AATGCGAGCCAGAATAATGA+TGG - chr3_4:62651297-62651316 Msa0512740:intron 40.0%
! AATGATGGAGTTAAGGTGGA+AGG - chr3_4:62651312-62651331 Msa0512740:intron 40.0%
AAAGCGGTAAACCCTTTATC+AGG + chr3_4:62651651-62651670 None:intergenic 40.0%
TGTTATCCCATAGTCTGTTC+AGG + chr3_4:62651735-62651754 None:intergenic 40.0%
TCTTGTACTTAGGGTAAGAG+AGG + chr3_4:62651903-62651922 None:intergenic 40.0%
CCCTAAGTACAAGATACAAC+AGG - chr3_4:62651909-62651928 Msa0512740:intron 40.0%
CCCTGTTGTATCTTGTACTT+AGG + chr3_4:62651913-62651932 None:intergenic 40.0%
ACGTGCACAATCAATTCAAC+TGG - chr3_4:62652008-62652027 Msa0512740:CDS 40.0%
CATCAATGTGATACGAGATC+AGG - chr3_4:62652084-62652103 Msa0512740:CDS 40.0%
! TTTAGGACTCTCAAACATCC+TGG + chr3_4:62652172-62652191 None:intergenic 40.0%
!!! GTTTTTTAGAGGGAAGAGAG+GGG + chr3_4:62652206-62652225 None:intergenic 40.0%
!!! CGTTTTTTAGAGGGAAGAGA+GGG + chr3_4:62652207-62652226 None:intergenic 40.0%
! CCTCTCTTCCCTCTAAAAAA+CGG - chr3_4:62652205-62652224 Msa0512740:intron 40.0%
GAAGAACACAGAAGAGAGTA+GGG + chr3_4:62652340-62652359 None:intergenic 40.0%
CTACTCTCTTCTGTGTTCTT+CGG - chr3_4:62652339-62652358 Msa0512740:intron 40.0%
TACTCTCTTCTGTGTTCTTC+GGG - chr3_4:62652340-62652359 Msa0512740:intron 40.0%
GCTCTTGACACAAATAGTTC+AGG - chr3_4:62652525-62652544 Msa0512740:intron 40.0%
TAGTAGAATCTCAAGCAGGT+TGG - chr3_4:62652688-62652707 Msa0512740:intron 40.0%
CCTCTCAACACTTCAATAGA+TGG + chr3_4:62652756-62652775 None:intergenic 40.0%
!! CCATCTATTGAAGTGTTGAG+AGG - chr3_4:62652753-62652772 Msa0512740:intron 40.0%
! AGAGGGTACAATTCTAACAG+AGG - chr3_4:62652771-62652790 Msa0512740:intron 40.0%
! CAATGATGCTGAGCAAGTTT+TGG - chr3_4:62652815-62652834 Msa0512740:intron 40.0%
!! TGAGCAAGTTTTGGCAGAAA+TGG - chr3_4:62652824-62652843 Msa0512740:intron 40.0%
TGAACGTGAAATGAAACTGC+AGG - chr3_4:62652872-62652891 Msa0512740:intron 40.0%
CGTGGCTACAGAAAAAAGTA+AGG - chr3_4:62652900-62652919 Msa0512740:intron 40.0%
AACAGTACAAGGTCTTCATG+CGG - chr3_4:62653355-62653374 Msa0512740:intron 40.0%
! TCACTCAAAAGAAGAGCATG+AGG - chr3_4:62653380-62653399 Msa0512740:intron 40.0%
AGCCACCCTTTATAAACTAG+AGG + chr3_4:62653531-62653550 None:intergenic 40.0%
! TCTAGTTTATAAAGGGTGGC+TGG - chr3_4:62653530-62653549 Msa0512740:intron 40.0%
CTAGTTTATAAAGGGTGGCT+GGG - chr3_4:62653531-62653550 Msa0512740:intron 40.0%
TAGTTTATAAAGGGTGGCTG+GGG - chr3_4:62653532-62653551 Msa0512740:intron 40.0%
TTATCAATCAAGCCACCAAG+TGG - chr3_4:62653833-62653852 Msa0512740:intron 40.0%
! GTGATAGTAGGGTGTTAATG+TGG - chr3_4:62653855-62653874 Msa0512740:intron 40.0%
CTGATATAGTTTGACCAAGG+AGG + chr3_4:62653989-62654008 None:intergenic 40.0%
AGGACAAAAGAAGCTGAACA+AGG - chr3_4:62654140-62654159 Msa0512740:intron 40.0%
! TTTGTGATAGCTTGTATGGC+TGG + chr3_4:62654239-62654258 None:intergenic 40.0%
TAGAACCATTGTCAGGTGTA+GGG + chr3_4:62654448-62654467 None:intergenic 40.0%
ATAGAACCATTGTCAGGTGT+AGG + chr3_4:62654449-62654468 None:intergenic 40.0%
! TACACCTGACAATGGTTCTA+TGG - chr3_4:62654448-62654467 Msa0512740:intron 40.0%
AATGCCATAGAACCATTGTC+AGG + chr3_4:62654455-62654474 None:intergenic 40.0%
TTTGGAGAAGAGATGGAAGG+GGG - chr3_4:62646306-62646325 Msa0512740:intron 45.0%
AAGGTTACGAGTCGAGTCTA+CGG + chr3_4:62646448-62646467 None:intergenic 45.0%
ACTTGCAACACATTGCTCCT+AGG - chr3_4:62646736-62646755 Msa0512740:intron 45.0%
CTTGCAACACATTGCTCCTA+GGG - chr3_4:62646737-62646756 Msa0512740:intron 45.0%
TTGCAACACATTGCTCCTAG+GGG - chr3_4:62646738-62646757 Msa0512740:intron 45.0%
! TAAATGTCACTTGGGAGAGG+GGG - chr3_4:62647112-62647131 Msa0512740:intron 45.0%
CTATAGCACAGTAAAGGCCT+AGG + chr3_4:62647246-62647265 None:intergenic 45.0%
CTAGGCCTTTACTGTGCTAT+AGG - chr3_4:62647244-62647263 Msa0512740:intron 45.0%
TTGTGGACGAATGCAGAAAG+TGG + chr3_4:62647306-62647325 None:intergenic 45.0%
TTCTGCATTCGTCCACAATG+AGG - chr3_4:62647308-62647327 Msa0512740:intron 45.0%
!! CATCAGCTTTGAGGCATACA+TGG - chr3_4:62647660-62647679 Msa0512740:intron 45.0%
TATCCATGTAGCCGATCCTT+AGG - chr3_4:62648570-62648589 Msa0512740:intron 45.0%
! GATCAAGGTGACGGTTAACA+TGG - chr3_4:62648763-62648782 Msa0512740:intron 45.0%
TGTCAGTATTGTGGATGGGA+TGG - chr3_4:62649000-62649019 Msa0512740:CDS 45.0%
ACATCTTCAGATTGGAGTGC+AGG - chr3_4:62649657-62649676 Msa0512740:intron 45.0%
GAGGTATGTGGTCTGAGTAT+AGG - chr3_4:62649699-62649718 Msa0512740:intron 45.0%
GCCATTGACATGCATGGATT+TGG - chr3_4:62649806-62649825 Msa0512740:intron 45.0%
CCCAAATCCATGCATGTCAA+TGG + chr3_4:62649810-62649829 None:intergenic 45.0%
! ACAGAATCTGGACCCAGTTT+TGG - chr3_4:62650471-62650490 Msa0512740:CDS 45.0%
! CAGAATCTGGACCCAGTTTT+GGG - chr3_4:62650472-62650491 Msa0512740:CDS 45.0%
!!! GACCCAGTTTTGGGAAAGTT+TGG - chr3_4:62650481-62650500 Msa0512740:CDS 45.0%
CATAAATCTGTAGTGGCGTG+TGG + chr3_4:62650570-62650589 None:intergenic 45.0%
GCCACTACAGATTTATGACG+TGG - chr3_4:62650573-62650592 Msa0512740:intron 45.0%
AGAGTCAGCTCTGCATTTGA+AGG + chr3_4:62650976-62650995 None:intergenic 45.0%
CAGCTCCGAAGAATCTAAGA+AGG - chr3_4:62651099-62651118 Msa0512740:intron 45.0%
TGCAATGCAAAGTAGTGCGA+AGG - chr3_4:62651960-62651979 Msa0512740:CDS 45.0%
GATCAGGGATGAACGTAGAA+TGG - chr3_4:62652100-62652119 Msa0512740:CDS 45.0%
GGAAATACTGGAGCAGAGAA+AGG - chr3_4:62652121-62652140 Msa0512740:intron 45.0%
TGCATCAGATTACACACTCC+AGG - chr3_4:62652151-62652170 Msa0512740:intron 45.0%
GAGGGGAGATGGAGAAATTT+AGG + chr3_4:62652189-62652208 None:intergenic 45.0%
!!! CCGTTTTTTAGAGGGAAGAG+AGG + chr3_4:62652208-62652227 None:intergenic 45.0%
CGAAGAACACAGAAGAGAGT+AGG + chr3_4:62652341-62652360 None:intergenic 45.0%
GTTGCATGCACTTGAAACAG+AGG - chr3_4:62653562-62653581 Msa0512740:intron 45.0%
!!! TCCTTTTTTCCACCAACTCC+CGG - chr3_4:62653591-62653610 Msa0512740:intron 45.0%
! CAAAATCTAGAACCGGGAGT+TGG + chr3_4:62653606-62653625 None:intergenic 45.0%
GAGTTACTACAACTCCCCTT+TGG - chr3_4:62653720-62653739 Msa0512740:intron 45.0%
!! AATGGACTATGTGGCCAAAG+GGG + chr3_4:62653737-62653756 None:intergenic 45.0%
!! GAATGGACTATGTGGCCAAA+GGG + chr3_4:62653738-62653757 None:intergenic 45.0%
!! TGAATGGACTATGTGGCCAA+AGG + chr3_4:62653739-62653758 None:intergenic 45.0%
GAAAAACTGGATCACACAGC+AGG + chr3_4:62653810-62653829 None:intergenic 45.0%
AACACCCTACTATCACCACT+TGG + chr3_4:62653851-62653870 None:intergenic 45.0%
! ACTTTAGGAAGGGGCTATGT+TGG - chr3_4:62653900-62653919 Msa0512740:intron 45.0%
TTCTGCACATGACCCATAGT+TGG - chr3_4:62653946-62653965 Msa0512740:intron 45.0%
CAAGGAGGAAATTCAAGCTG+CGG + chr3_4:62653974-62653993 None:intergenic 45.0%
TTTGGCAGACGTGAATCATG+TGG + chr3_4:62654018-62654037 None:intergenic 45.0%
TTGCAGGAAGCTAGAATTGC+TGG - chr3_4:62654074-62654093 Msa0512740:intron 45.0%
AGTGGTCAGATTGGAACAAG+TGG - chr3_4:62654176-62654195 Msa0512740:intron 45.0%
GTAATGTTGAGGAAGATGGG+TGG + chr3_4:62654524-62654543 None:intergenic 45.0%
CGCGTAATGTTGAGGAAGAT+GGG + chr3_4:62654527-62654546 None:intergenic 45.0%
CCATCTTCCTCAACATTACG+CGG - chr3_4:62654525-62654544 Msa0512740:intron 45.0%
!! AATGAATATATAATAATTTA+GGG + chr3_4:62645831-62645850 None:intergenic 5.0%
!!! ATTTTAATTATAATTGAATA+AGG - chr3_4:62646364-62646383 Msa0512740:intron 5.0%
GTCACTTGACAACGTGTCGT+AGG - chr3_4:62646230-62646249 Msa0512740:intron 50.0%
TGCAACACATTGCTCCTAGG+GGG - chr3_4:62646739-62646758 Msa0512740:intron 50.0%
GCTTCGCCTAACATGTGATG+CGG - chr3_4:62647059-62647078 Msa0512740:intron 50.0%
TTCCTGCCGCATCACATGTT+AGG + chr3_4:62647068-62647087 None:intergenic 50.0%
GCAGGCATGGGAATAACTGA+TGG - chr3_4:62648184-62648203 Msa0512740:intron 50.0%
TCACCTAAGGATCGGCTACA+TGG + chr3_4:62648576-62648595 None:intergenic 50.0%
AGCCGATCCTTAGGTGAACT+TGG - chr3_4:62648579-62648598 Msa0512740:intron 50.0%
CAAAGAGGAACTCCTTGCCA+TGG - chr3_4:62650045-62650064 Msa0512740:intron 50.0%
GAACTCCTTGCCATGGCAAA+GGG - chr3_4:62650052-62650071 Msa0512740:intron 50.0%
!! GAGTTGATGTCCCTTTGCCA+TGG + chr3_4:62650065-62650084 None:intergenic 50.0%
!! ATTGGACCCCTCGGATTAGT+CGG + chr3_4:62650346-62650365 None:intergenic 50.0%
TCACAAGTGGACAGTGGGAT+TGG + chr3_4:62650364-62650383 None:intergenic 50.0%
GAGCTGAGATGTTGCACCAA+AGG + chr3_4:62651085-62651104 None:intergenic 50.0%
AACATGTCTAGGCCAACCTC+AGG - chr3_4:62651139-62651158 Msa0512740:intron 50.0%
ACACACACACCCCTAGCATT+GGG - chr3_4:62651766-62651785 Msa0512740:intron 50.0%
AGCCTTCAAGCCCAATGCTA+GGG + chr3_4:62651779-62651798 None:intergenic 50.0%
AAGCCTTCAAGCCCAATGCT+AGG + chr3_4:62651780-62651799 None:intergenic 50.0%
CACAGAAGAGAGTAGGGACT+GGG + chr3_4:62652334-62652353 None:intergenic 50.0%
ACACAGAAGAGAGTAGGGAC+TGG + chr3_4:62652335-62652354 None:intergenic 50.0%
CTCAGAATCAGGCTATCCCA+GGG + chr3_4:62653067-62653086 None:intergenic 50.0%
ACTCAGAATCAGGCTATCCC+AGG + chr3_4:62653068-62653087 None:intergenic 50.0%
!! ACCGGGAGTTGGTGGAAAAA+AGG + chr3_4:62653595-62653614 None:intergenic 50.0%
! AATCTAGAACCGGGAGTTGG+TGG + chr3_4:62653603-62653622 None:intergenic 50.0%
! TGGGGCGCAAAATCTAGAAC+CGG + chr3_4:62653613-62653632 None:intergenic 50.0%
TCTATGGGACAAAGTGCGAC+TGG + chr3_4:62653681-62653700 None:intergenic 50.0%
AGAACCCAAACTAGGCTCGA+GGG + chr3_4:62653786-62653805 None:intergenic 50.0%
AGCCACCAAGTGGTGATAGT+AGG - chr3_4:62653843-62653862 Msa0512740:intron 50.0%
GCCACCAAGTGGTGATAGTA+GGG - chr3_4:62653844-62653863 Msa0512740:intron 50.0%
ACCCTACTATCACCACTTGG+TGG + chr3_4:62653848-62653867 None:intergenic 50.0%
CGCAGCTTGAATTTCCTCCT+TGG - chr3_4:62653972-62653991 Msa0512740:intron 50.0%
! GTGATAGCTTGTATGGCTGG+CGG + chr3_4:62654236-62654255 None:intergenic 50.0%
CCATTGTCAGGTGTAGGGAA+GGG + chr3_4:62654443-62654462 None:intergenic 50.0%
ACCATTGTCAGGTGTAGGGA+AGG + chr3_4:62654444-62654463 None:intergenic 50.0%
CCGCGTAATGTTGAGGAAGA+TGG + chr3_4:62654528-62654547 None:intergenic 50.0%
GCATGATCCGCGTAATGTTG+AGG + chr3_4:62654535-62654554 None:intergenic 50.0%
GCTCATCTGCTCACGACAAC+AGG - chr3_4:62645667-62645686 Msa0512740:CDS 55.0%
GCAACACATTGCTCCTAGGG+GGG - chr3_4:62646740-62646759 Msa0512740:intron 55.0%
CAACACATTGCTCCTAGGGG+GGG - chr3_4:62646741-62646760 Msa0512740:intron 55.0%
AACACATTGCTCCTAGGGGG+GGG - chr3_4:62646742-62646761 Msa0512740:intron 55.0%
AGTCCACTCACCCCTGCTAA+GGG + chr3_4:62647868-62647887 None:intergenic 55.0%
AAGTCCACTCACCCCTGCTA+AGG + chr3_4:62647869-62647888 None:intergenic 55.0%
GGAACTCCTTGCCATGGCAA+AGG - chr3_4:62650051-62650070 Msa0512740:intron 55.0%
GATGTCCCTTTGCCATGGCA+AGG + chr3_4:62650060-62650079 None:intergenic 55.0%
GCTCGCATTGGAAGCCTTCT+TGG + chr3_4:62651286-62651305 None:intergenic 55.0%
CACACACACACCCCTAGCAT+TGG - chr3_4:62651765-62651784 Msa0512740:intron 55.0%
! ACCCCTAGCATTGGGCTTGA+AGG - chr3_4:62651774-62651793 Msa0512740:intron 55.0%
GCCTTCAAGCCCAATGCTAG+GGG + chr3_4:62651778-62651797 None:intergenic 55.0%
TAGAGGGAAGAGAGGGGAGA+TGG + chr3_4:62652200-62652219 None:intergenic 55.0%
! TCTCAAGCAGGTTGGAGCAC+TGG - chr3_4:62652696-62652715 Msa0512740:intron 55.0%
ATGAAACTGCAGGTGCTCCG+TGG - chr3_4:62652882-62652901 Msa0512740:intron 55.0%
! GGGGCGCAAAATCTAGAACC+GGG + chr3_4:62653612-62653631 None:intergenic 55.0%
! GGCTCGAGGGTCCTCTATTT+TGG + chr3_4:62653773-62653792 None:intergenic 55.0%
AGGACCCTCGAGCCTAGTTT+GGG - chr3_4:62653779-62653798 Msa0512740:intron 55.0%
CAGAACCCAAACTAGGCTCG+AGG + chr3_4:62653787-62653806 None:intergenic 55.0%
CAGCAGGCAGAACCCAAACT+AGG + chr3_4:62653794-62653813 None:intergenic 55.0%
CAAGCTGCGGCTCCAACTAT+GGG + chr3_4:62653961-62653980 None:intergenic 55.0%
TCAAGCTGCGGCTCCAACTA+TGG + chr3_4:62653962-62653981 None:intergenic 55.0%
GGCATCGTATCAGCACGCTT+TGG + chr3_4:62654036-62654055 None:intergenic 55.0%
TGTCAGGTGTAGGGAAGGGA+GGG + chr3_4:62654439-62654458 None:intergenic 55.0%
TTGTCAGGTGTAGGGAAGGG+AGG + chr3_4:62654440-62654459 None:intergenic 55.0%
CCCTTCCCTACACCTGACAA+TGG - chr3_4:62654440-62654459 Msa0512740:intron 55.0%
GTGAGCAGATGAGCGTGACG+CGG + chr3_4:62645661-62645680 None:intergenic 60.0%
ACACATTGCTCCTAGGGGGG+GGG - chr3_4:62646743-62646762 Msa0512740:intron 60.0%
CGCCTAACATGTGATGCGGC+AGG - chr3_4:62647063-62647082 Msa0512740:intron 60.0%
GGGAGAGGGGGTTTAGTGAC+TGG - chr3_4:62647124-62647143 Msa0512740:intron 60.0%
CATCCCTTAGCAGGGGTGAG+TGG - chr3_4:62647862-62647881 Msa0512740:intron 60.0%
GACAGTGGGATTGGACCCCT+CGG + chr3_4:62650355-62650374 None:intergenic 60.0%
GTAGGGACTGGGACCCGATT+TGG + chr3_4:62652323-62652342 None:intergenic 60.0%
GAGGACCCTCGAGCCTAGTT+TGG - chr3_4:62653778-62653797 Msa0512740:intron 60.0%
GGCGGTGCATCCTTGGTACT+AGG + chr3_4:62654218-62654237 None:intergenic 60.0%
TATGGCTGGCGGTGCATCCT+TGG + chr3_4:62654225-62654244 None:intergenic 60.0%
CACATTGCTCCTAGGGGGGG+GGG - chr3_4:62646744-62646763 Msa0512740:intron 65.0%
ACATTGCTCCTAGGGGGGGG+GGG - chr3_4:62646745-62646764 Msa0512740:intron 65.0%
AGATGAGCGTGACGCGGCGC+GGG + chr3_4:62645655-62645674 None:intergenic 70.0%
CAGATGAGCGTGACGCGGCG+CGG + chr3_4:62645656-62645675 None:intergenic 70.0%
CATTGCTCCTAGGGGGGGGG+GGG - chr3_4:62646746-62646765 Msa0512740:intron 70.0%
ATTGCTCCTAGGGGGGGGGG+GGG - chr3_4:62646747-62646766 Msa0512740:intron 70.0%
! GGGGGGGGGGGTTCTAACTG+AGG - chr3_4:62646762-62646781 Msa0512740:intron 70.0%
TTGCTCCTAGGGGGGGGGGG+GGG - chr3_4:62646748-62646767 Msa0512740:intron 75.0%
! TGCTCCTAGGGGGGGGGGGG+GGG - chr3_4:62646749-62646768 Msa0512740:intron 80.0%
! GCTCCTAGGGGGGGGGGGGG+GGG - chr3_4:62646750-62646769 Msa0512740:intron 85.0%
! GAACCCCCCCCCCCCCCCCT+AGG + chr3_4:62646756-62646775 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 62645642 62654679 62645642 ID=Msa0512740;Name=Msa0512740
chr3_4 mRNA 62645642 62654679 62645642 ID=Msa0512740-mRNA-1;Parent=Msa0512740;Name=Msa0512740-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|0.92|1|1|13|0|535
chr3_4 exon 62654633 62654679 62654633 ID=Msa0512740-mRNA-1:exon:15537;Parent=Msa0512740-mRNA-1
chr3_4 exon 62652214 62652269 62652214 ID=Msa0512740-mRNA-1:exon:15536;Parent=Msa0512740-mRNA-1
chr3_4 exon 62651955 62652133 62651955 ID=Msa0512740-mRNA-1:exon:15535;Parent=Msa0512740-mRNA-1
chr3_4 exon 62650620 62650685 62650620 ID=Msa0512740-mRNA-1:exon:15534;Parent=Msa0512740-mRNA-1
chr3_4 exon 62650390 62650515 62650390 ID=Msa0512740-mRNA-1:exon:15533;Parent=Msa0512740-mRNA-1
chr3_4 exon 62650230 62650302 62650230 ID=Msa0512740-mRNA-1:exon:15532;Parent=Msa0512740-mRNA-1
chr3_4 exon 62649296 62649353 62649296 ID=Msa0512740-mRNA-1:exon:15531;Parent=Msa0512740-mRNA-1
chr3_4 exon 62649161 62649219 62649161 ID=Msa0512740-mRNA-1:exon:15530;Parent=Msa0512740-mRNA-1
chr3_4 exon 62648988 62649065 62648988 ID=Msa0512740-mRNA-1:exon:15529;Parent=Msa0512740-mRNA-1
chr3_4 exon 62647405 62647630 62647405 ID=Msa0512740-mRNA-1:exon:15528;Parent=Msa0512740-mRNA-1
chr3_4 exon 62646860 62647070 62646860 ID=Msa0512740-mRNA-1:exon:15527;Parent=Msa0512740-mRNA-1
chr3_4 exon 62646005 62646241 62646005 ID=Msa0512740-mRNA-1:exon:15526;Parent=Msa0512740-mRNA-1
chr3_4 exon 62645642 62645833 62645642 ID=Msa0512740-mRNA-1:exon:15525;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62654633 62654679 62654633 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62652214 62652269 62652214 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62651955 62652133 62651955 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62650620 62650685 62650620 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62650390 62650515 62650390 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62650230 62650302 62650230 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62649296 62649353 62649296 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62649161 62649219 62649161 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62648988 62649065 62648988 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62647405 62647630 62647405 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62646860 62647070 62646860 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62646005 62646241 62646005 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
chr3_4 CDS 62645642 62645833 62645642 ID=Msa0512740-mRNA-1:cds;Parent=Msa0512740-mRNA-1
Gene Sequence

>Msa0512740

ATGGGTCAGTCCCGCGCCGCGTCACGCTCATCTGCTCACGACAACAGGTCCAAGAGAAAAAAGGCTGCTTTAAATGCTGATGATTTAGAAGCTTCATATGCAGGCATGGGAATAACTGATGGCAAAGTATCACTATATCACTGTAATTACTGCAAAAAAAATATTTCAGGGAAGATTCACATCAAATGCGCTGTGTGTCAAGATTTTGATCTCTGCATAGAGTGCTTCTTTGTTGGTGCTGAGTTGACTCCTCATAAAAGCAATCATCCATATCGGGTTATGGATAGCCTATCTTTTCCGCTTACATCTTCAGATTGGAGTGCAGGTGAAGAGAAGTTACTTATTGAGGCCATTGACATGCATGGATTTGGGAATTGGAATGGTGTTGCTGAAAACGTTGGGACAAAAAGCAAATCTCAGTGTATTGACCATTATAATGTTGTATATCTGAATTCGCCATGTTTTCCTCTACCTGATTTGTCTTATTCTATGGGAAAGAACAAAGAGGAACTCCTTGCCATGGCAAAGGGACATCAACTCAAGAAAGATTTTCCTTCAAATGCAGAGCTGACTCTGAAAGAACCTCACCTTTCTGATGGAATAAACTCCGAAGAATCTAAGAAGGCAGAGACCACTAATCAAAACATGTCTAGGCCAACCTCAGCACGCGATGAAGCTCTTCCAAGTATAACCAAGAAGGCTTCCAATGCGAGCCAGAATAATGATGGAGTTAAGGTGGAAGTAGAATCTCAAGCAGGTTGGAGCACTGGTGAAAAGAAGCCTAAATTATCTGGGGAATATAAGCCATCTATTGAAGTGTTGAGAGGGTACAATTCTAACAGAGGTGAATTTGAGATTGAATATGACAATGATGCTGAGCAAGTTTTGGCAGAAATGGAATTTAAGGACACTGATACTGAAGCTGAACGTGAAATGAAACTGCAGGTGCTCCGTGGCTACAGAAAAAAGTTAGATGAACGAAAGCGCAGAAAAGAATTTATACTTGAAAGAAATTTACTTTGTCCCGATCCTTTTGAGAAATTTCTCTCACCTGAAGAGCTTCAAATATGTGAACAGTACAAGGTCTTCATGCGGTTTCACTCAAAAGAAGAGCATGAGGAGTTGCTGCAAACTGCTATTCGAGAACACCGACTTGCCAAAAGAATAAAAGACTTAAAGGAAGCTAGAATTGCTGGCTGTGTAACTTCTGATGAAGCTTATCAATTTATTGAACAAAAGAGGACAAAAGAAGCTGAACAAGGTAACTATAAAGAAAGTGGTCAGATTGGAACAAGTGGCAAGACAGAATCATTTCCTAGTACCAAGGATGCACCGCCAGCCATACAAGCTATCACAAAGACACTAGAAGAATGGGATATTAGTGATTTTGAAGGGGCTGAATTGCTATCTGAATCTGAGATAAAGCTTTGTAATGAGATCAGAATGCTACCACCCATCTTCCTCAACATTACGCGGATCATGCAGTTAGAAATTTCAAAGGGCAGAGTAACCAAGAAATCTGATGCATATCTACTGTTCAAGTTCTCTCCAAGCAAGATTGACAGAATTTATGATATGCTTGTGGAAAAAGGAGTTGTTCAAGCATAA

Protein sequence

>Msa0512740

MGQSRAASRSSAHDNRSKRKKAALNADDLEASYAGMGITDGKVSLYHCNYCKKNISGKIHIKCAVCQDFDLCIECFFVGAELTPHKSNHPYRVMDSLSFPLTSSDWSAGEEKLLIEAIDMHGFGNWNGVAENVGTKSKSQCIDHYNVVYLNSPCFPLPDLSYSMGKNKEELLAMAKGHQLKKDFPSNAELTLKEPHLSDGINSEESKKAETTNQNMSRPTSARDEALPSITKKASNASQNNDGVKVEVESQAGWSTGEKKPKLSGEYKPSIEVLRGYNSNRGEFEIEYDNDAEQVLAEMEFKDTDTEAEREMKLQVLRGYRKKLDERKRRKEFILERNLLCPDPFEKFLSPEELQICEQYKVFMRFHSKEEHEELLQTAIREHRLAKRIKDLKEARIAGCVTSDEAYQFIEQKRTKEAEQGNYKESGQIGTSGKTESFPSTKDAPPAIQAITKTLEEWDISDFEGAELLSESEIKLCNEIRMLPPIFLNITRIMQLEISKGRVTKKSDAYLLFKFSPSKIDRIYDMLVEKGVVQA*