Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0514770 | XP_028776533.1 | 64.561 | 285 | 38 | 4 | 64 | 289 | 152 | 432 | 2.23e-115 | 349 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0514770 | sp|P51566|AFC1_ARATH | 58.214 | 280 | 53 | 6 | 68 | 287 | 174 | 449 | 3.97e-97 | 296 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0514770 | A0A2K3PRK9 | 69.395 | 281 | 23 | 4 | 68 | 289 | 152 | 428 | 3.57e-115 | 347 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0514770 | MtrunA17_Chr3g0123491 | 55.668 | 397 | 51 | 8 | 11 | 289 | 39 | 428 | 8.10e-119 | 347 |
Msa0514770 | MtrunA17_Chr3g0116701 | 55.000 | 280 | 61 | 5 | 68 | 288 | 153 | 426 | 2.77e-94 | 285 |
Msa0514770 | MtrunA17_Chr4g0058241 | 55.678 | 273 | 56 | 5 | 68 | 281 | 157 | 423 | 2.74e-93 | 282 |
Msa0514770 | MtrunA17_Chr3g0139371 | 47.445 | 274 | 78 | 5 | 67 | 281 | 132 | 398 | 1.08e-70 | 223 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0514770 | AT3G53570.1 | 58.214 | 280 | 53 | 6 | 68 | 287 | 174 | 449 | 4.03e-98 | 296 |
Msa0514770 | AT3G53570.4 | 58.214 | 280 | 53 | 6 | 68 | 287 | 174 | 449 | 4.03e-98 | 296 |
Msa0514770 | AT3G53570.2 | 58.214 | 280 | 53 | 6 | 68 | 287 | 174 | 449 | 4.03e-98 | 296 |
Msa0514770 | AT3G53570.3 | 58.214 | 280 | 53 | 6 | 68 | 287 | 160 | 435 | 5.72e-98 | 295 |
Msa0514770 | AT3G53570.5 | 58.214 | 280 | 53 | 6 | 68 | 287 | 160 | 435 | 5.72e-98 | 295 |
Msa0514770 | AT4G24740.6 | 52.920 | 274 | 64 | 4 | 68 | 282 | 54 | 321 | 5.88e-91 | 273 |
Msa0514770 | AT4G24740.9 | 52.920 | 274 | 64 | 4 | 68 | 282 | 54 | 321 | 5.88e-91 | 273 |
Msa0514770 | AT4G24740.2 | 52.920 | 274 | 64 | 4 | 68 | 282 | 54 | 321 | 5.88e-91 | 273 |
Msa0514770 | AT4G24740.7 | 52.920 | 274 | 64 | 4 | 68 | 282 | 119 | 386 | 5.57e-90 | 273 |
Msa0514770 | AT4G24740.1 | 52.920 | 274 | 64 | 4 | 68 | 282 | 157 | 424 | 2.79e-89 | 272 |
Msa0514770 | AT4G32660.4 | 45.620 | 274 | 82 | 5 | 68 | 281 | 18 | 284 | 7.91e-70 | 218 |
Msa0514770 | AT4G32660.1 | 45.620 | 274 | 82 | 5 | 68 | 281 | 130 | 396 | 4.19e-68 | 217 |
Msa0514770 | AT4G32660.3 | 45.620 | 274 | 82 | 5 | 68 | 281 | 122 | 388 | 4.67e-68 | 217 |
Msa0514770 | AT4G24740.10 | 49.776 | 223 | 53 | 3 | 114 | 282 | 1 | 218 | 5.54e-66 | 206 |
Msa0514770 | AT4G24740.8 | 49.776 | 223 | 53 | 3 | 114 | 282 | 1 | 218 | 5.54e-66 | 206 |
Msa0514770 | AT4G24740.5 | 64.138 | 145 | 38 | 4 | 68 | 205 | 54 | 191 | 1.71e-56 | 182 |
Msa0514770 | AT4G24740.4 | 63.889 | 144 | 40 | 3 | 68 | 205 | 157 | 294 | 3.57e-55 | 181 |
Msa0514770 | AT4G24740.3 | 63.889 | 144 | 40 | 3 | 68 | 205 | 157 | 294 | 5.59e-55 | 182 |
Msa0514770 | AT4G32660.2 | 44.828 | 232 | 61 | 5 | 68 | 239 | 130 | 354 | 1.23e-51 | 173 |
Find 80 sgRNAs with CRISPR-Local
Find 575 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTATTAAGGTTATTGATTT+TGG | 0.205385 | 3_4:+65563491 | Msa0514770:CDS |
TTACAAGTGGTTCCCTCTTT+TGG | 0.209812 | 3_4:-65563449 | None:intergenic |
ATTAAGGGATTAGCTGAAAA+AGG | 0.232262 | 3_4:+65561193 | Msa0514770:CDS |
CTATACTAGATATTCAATTA+AGG | 0.254925 | 3_4:+65561177 | Msa0514770:CDS |
GCCAAAGTCAAGTGCTATTA+AGG | 0.262742 | 3_4:+65563478 | Msa0514770:CDS |
GGATCTTCTTGATCTCTTGC+AGG | 0.275814 | 3_4:+65566976 | Msa0514770:CDS |
TCAGGCACCTTTATATATTC+AGG | 0.287976 | 3_4:-65563265 | None:intergenic |
TTGTCTCAACACGACATTAT+AGG | 0.316285 | 3_4:+65563549 | Msa0514770:CDS |
TATTTCCCCTGAATATATAA+AGG | 0.322832 | 3_4:+65563258 | Msa0514770:CDS |
TGATTATGTGTAGGCTCATT+CGG | 0.324672 | 3_4:+65561073 | Msa0514770:intron |
TTGGAGAAAATTTAACTTCT+CGG | 0.328780 | 3_4:+65561266 | Msa0514770:CDS |
TCACAATACAAATATGTTTC+CGG | 0.332801 | 3_4:-65561769 | None:intergenic |
TGAGCTAGGAAGACAATTAT+TGG | 0.333476 | 3_4:+65561951 | Msa0514770:CDS |
ATGGGCGATAACTGTTCTTC+CGG | 0.333672 | 3_4:-65561909 | None:intergenic |
ATAACTGTTCTTCCGGGGCT+TGG | 0.353018 | 3_4:-65561902 | None:intergenic |
CGGACAAGATCAACTGGAAA+TGG | 0.354060 | 3_4:-65561928 | None:intergenic |
TATACTAGATATTCAATTAA+GGG | 0.361106 | 3_4:+65561178 | Msa0514770:CDS |
GATTATGTGTAGGCTCATTC+GGG | 0.369451 | 3_4:+65561074 | Msa0514770:intron |
TCTCGAGAGACTGCTCCTTT+AGG | 0.375677 | 3_4:-65566802 | None:intergenic |
TCAGAAGGGGTAGGCTGAAC+TGG | 0.384774 | 3_4:+65566779 | Msa0514770:CDS |
TTTGTCATCATCTCGCCATT+GGG | 0.389445 | 3_4:-65561221 | None:intergenic |
TGGGCGATAACTGTTCTTCC+GGG | 0.401167 | 3_4:-65561908 | None:intergenic |
CTTTGTCATCATCTCGCCAT+TGG | 0.413412 | 3_4:-65561222 | None:intergenic |
ATGAGCCTTCATCCTGCTCA+TGG | 0.417112 | 3_4:-65567017 | None:intergenic |
AGACAATATAGTTGTGATCT+TGG | 0.419870 | 3_4:-65563532 | None:intergenic |
AGCTCACGGACAAGATCAAC+TGG | 0.435074 | 3_4:-65561934 | None:intergenic |
CTCCAAGCGCAAACATGTAA+TGG | 0.436753 | 3_4:-65561249 | None:intergenic |
AGCAGAAATACCTTGTAGTC+AGG | 0.458215 | 3_4:-65563283 | None:intergenic |
TAGAGATGGTTACAGAGATC+AGG | 0.460432 | 3_4:-65561157 | None:intergenic |
GTTGATCTTGTCCGTGAGCT+AGG | 0.464034 | 3_4:+65561937 | Msa0514770:CDS |
GCTTCAAGTCGGTGTGGATG+AGG | 0.465615 | 3_4:-65563219 | None:intergenic |
GGCCATTACATGTTTGCGCT+TGG | 0.467104 | 3_4:+65561247 | Msa0514770:CDS |
AGCATGTGGATCACTCGGTC+GGG | 0.476825 | 3_4:+65566954 | Msa0514770:CDS |
GCTGTGTTCAAATACGCAAC+TGG | 0.482726 | 3_4:+65561735 | Msa0514770:intron |
AACCCTATACTTAATACCTC+TGG | 0.494662 | 3_4:-65567078 | None:intergenic |
AAACCGCAGGTCACCAAAAG+AGG | 0.495710 | 3_4:+65563436 | Msa0514770:intron |
AAACCTACCAAGAATAATCT+CGG | 0.495827 | 3_4:-65563576 | None:intergenic |
ACCTTAATAGCACTTGACTT+TGG | 0.496925 | 3_4:-65563479 | None:intergenic |
CAGGCACCTTTATATATTCA+GGG | 0.499314 | 3_4:-65563264 | None:intergenic |
GGACAAGATCAACTGGAAAT+GGG | 0.504368 | 3_4:-65561927 | None:intergenic |
ATCTCTTGCAGGGTCTACTT+CGG | 0.504464 | 3_4:+65566987 | Msa0514770:CDS |
GATCTTCTTGATCTCTTGCA+GGG | 0.509266 | 3_4:+65566977 | Msa0514770:CDS |
AACCTACCAAGAATAATCTC+GGG | 0.509416 | 3_4:-65563575 | None:intergenic |
TTACAGGTATTTGAGATGGT+TGG | 0.515375 | 3_4:+65561878 | Msa0514770:intron |
TTCGGTTTGATCCCATGAGC+AGG | 0.516989 | 3_4:+65567005 | Msa0514770:CDS |
TTGAATATCTAGTATAGAGA+TGG | 0.524817 | 3_4:-65561171 | None:intergenic |
TATAAAGGTGCCTGACTACA+AGG | 0.524930 | 3_4:+65563273 | Msa0514770:CDS |
TGAGCCTTCATCCTGCTCAT+GGG | 0.527376 | 3_4:-65567016 | None:intergenic |
GCAACTGGTTTGACGACTAC+CGG | 0.532861 | 3_4:+65561750 | Msa0514770:CDS |
TGATCCCATGAGCAGGATGA+AGG | 0.535281 | 3_4:+65567012 | Msa0514770:CDS |
GGTAGGCTGAACTGGCCTAA+AGG | 0.542609 | 3_4:+65566787 | Msa0514770:CDS |
GCATGTGGATCACTCGGTCG+GGG | 0.553004 | 3_4:+65566955 | Msa0514770:CDS |
GCTAGTGCGACAACAAGCTA+TGG | 0.553311 | 3_4:+65561118 | Msa0514770:CDS |
CAGCATGTGGATCACTCGGT+CGG | 0.554576 | 3_4:+65566953 | Msa0514770:CDS |
GCTCATTCGGGGATATATTG+TGG | 0.561813 | 3_4:+65561086 | Msa0514770:CDS |
CTTTGGCAGTCTCTTACAAG+TGG | 0.562127 | 3_4:-65563462 | None:intergenic |
GAGATGGTTGGACCAAGCCC+CGG | 0.562232 | 3_4:+65561890 | Msa0514770:intron |
TGGCGAGATGATGACAAAGA+TGG | 0.565185 | 3_4:+65561226 | Msa0514770:CDS |
CTGCAAAGAAGTATGTCAGA+AGG | 0.584353 | 3_4:+65566764 | Msa0514770:CDS |
TGCAAAGAAGTATGTCAGAA+GGG | 0.585736 | 3_4:+65566765 | Msa0514770:CDS |
ATAATTGTCTTCCTAGCTCA+CGG | 0.597751 | 3_4:-65561948 | None:intergenic |
TTGTCATCATCTCGCCATTG+GGG | 0.614660 | 3_4:-65561220 | None:intergenic |
AGAAGTATGTCAGAAGGGGT+AGG | 0.616874 | 3_4:+65566770 | Msa0514770:CDS |
AGTCTCTCGAGAAAGCATCA+AGG | 0.622874 | 3_4:+65566813 | Msa0514770:CDS |
AACCGCAGGTCACCAAAAGA+GGG | 0.627549 | 3_4:+65563437 | Msa0514770:intron |
AGGCACCTTTATATATTCAG+GGG | 0.629711 | 3_4:-65563263 | None:intergenic |
TTTCAGGCTTCAAGTCGGTG+TGG | 0.629945 | 3_4:-65563225 | None:intergenic |
GGGCGATAACTGTTCTTCCG+GGG | 0.636458 | 3_4:-65561907 | None:intergenic |
ACCTACCAAGAATAATCTCG+GGG | 0.647074 | 3_4:-65563574 | None:intergenic |
GCAAAGAAGTATGTCAGAAG+GGG | 0.650908 | 3_4:+65566766 | Msa0514770:CDS |
AACAAGCTATGGAACGCTGA+GGG | 0.655943 | 3_4:+65561129 | Msa0514770:CDS |
GTTGTGATCTTGGTGCTCGT+AGG | 0.656201 | 3_4:-65563522 | None:intergenic |
GATGCAGCATGTGGATCACT+CGG | 0.666083 | 3_4:+65566949 | Msa0514770:CDS |
AGGTATTTCTGCTCTCTCCG+CGG | 0.672894 | 3_4:+65563293 | Msa0514770:CDS |
GAATCTGGTGATGCAGCATG+TGG | 0.677106 | 3_4:+65566940 | Msa0514770:intron |
CAACAAGCTATGGAACGCTG+AGG | 0.687932 | 3_4:+65561128 | Msa0514770:CDS |
ATGTTACAGACAGGAAGACG+AGG | 0.707769 | 3_4:-65566850 | None:intergenic |
TTACTGGGGAGCATTACCAG+AGG | 0.722159 | 3_4:+65567062 | Msa0514770:CDS |
ATTATGTGTAGGCTCATTCG+GGG | 0.744275 | 3_4:+65561075 | Msa0514770:intron |
CCTACCAAGAATAATCTCGG+GGG | 0.787108 | 3_4:-65563573 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTCAAAATAACTAATCATTT+GGG | - | chr3_4:65560826-65560845 | None:intergenic | 15.0% |
!! | ATTCAAAATAACTAATCATT+TGG | - | chr3_4:65560827-65560846 | None:intergenic | 15.0% |
!! | TATACTAGATATTCAATTAA+GGG | + | chr3_4:65561178-65561197 | Msa0514770:CDS | 15.0% |
!!! | TACTAATACATTTTAAAAAG+GGG | - | chr3_4:65562725-65562744 | None:intergenic | 15.0% |
!!! | CTACTAATACATTTTAAAAA+GGG | - | chr3_4:65562726-65562745 | None:intergenic | 15.0% |
!! | CTTTAAACATGTTATAATTA+TGG | + | chr3_4:65562894-65562913 | Msa0514770:intron | 15.0% |
!!! | GAAATAAAAAGTATATTTTC+AGG | - | chr3_4:65563244-65563263 | None:intergenic | 15.0% |
!!! | TTTTTTCAGAAACATATTTT+TGG | + | chr3_4:65563859-65563878 | Msa0514770:intron | 15.0% |
!!! | TTTTTCAGAAACATATTTTT+GGG | + | chr3_4:65563860-65563879 | Msa0514770:intron | 15.0% |
!!! | GTTACTTTTACTATAAATAT+AGG | + | chr3_4:65563908-65563927 | Msa0514770:intron | 15.0% |
!!! | TTTTTCAGAAACATATTTTT+TGG | + | chr3_4:65563860-65563879 | Msa0514770:intron | 15.0% |
!!! | GTTACTTTTACTATAAATAT+AGG | + | chr3_4:65563908-65563927 | Msa0514770:intron | 15.0% |
!!! | TATATTCTGATCAAATTTTA+TGG | - | chr3_4:65566520-65566539 | None:intergenic | 15.0% |
!! | TCAAAATAACTAATCATTTG+GGG | - | chr3_4:65560825-65560844 | None:intergenic | 20.0% |
!!! | ATTGATAATTGAAAGTTAGA+CGG | + | chr3_4:65560932-65560951 | Msa0514770:intron | 20.0% |
!! | CTATACTAGATATTCAATTA+AGG | + | chr3_4:65561177-65561196 | Msa0514770:CDS | 20.0% |
!!! | AATGTAGAAAAGCTTTTTAA+TGG | - | chr3_4:65561310-65561329 | None:intergenic | 20.0% |
!!! | TGAAGAAGATAAATGTTTTT+TGG | - | chr3_4:65561558-65561577 | None:intergenic | 20.0% |
!!! | TGAAATTTTAATGATGTTAC+AGG | + | chr3_4:65561862-65561881 | Msa0514770:intron | 20.0% |
!!! | AGAGTTGTAAAAGTATTATT+GGG | - | chr3_4:65562132-65562151 | None:intergenic | 20.0% |
!!! | AAGAGTTGTAAAAGTATTAT+TGG | - | chr3_4:65562133-65562152 | None:intergenic | 20.0% |
!!! | ACTAATACATTTTAAAAAGG+GGG | - | chr3_4:65562724-65562743 | None:intergenic | 20.0% |
!!! | GCTACTAATACATTTTAAAA+AGG | - | chr3_4:65562727-65562746 | None:intergenic | 20.0% |
!! | TTTGGAAAGAGAAAAAAAAA+AGG | + | chr3_4:65563120-65563139 | Msa0514770:intron | 20.0% |
!!! | TTCTATATCTCTTATTTTCT+TGG | + | chr3_4:65563597-65563616 | Msa0514770:intron | 20.0% |
!! | AAAAAACTATTACGCAAAAT+CGG | - | chr3_4:65563844-65563863 | None:intergenic | 20.0% |
!!! | CAGATTTGTTACAATTTTAT+GGG | + | chr3_4:65563884-65563903 | Msa0514770:intron | 20.0% |
!! | AAAAAACTATTACGCAAAAT+CGG | - | chr3_4:65563844-65563863 | None:intergenic | 20.0% |
!!! | CAGATTTGTTACAATTTTAT+GGG | + | chr3_4:65563884-65563903 | Msa0514770:intron | 20.0% |
!! | ACTATTCCAAATAAATAGAT+TGG | + | chr3_4:65566682-65566701 | Msa0514770:intron | 20.0% |
!! | ACAATACCAATCTATTTATT+TGG | - | chr3_4:65566691-65566710 | None:intergenic | 20.0% |
! | AAGTATAGCTCAAAGAAAAA+GGG | + | chr3_4:65560908-65560927 | Msa0514770:intron | 25.0% |
! | CAAAATAAAAACACCACAAA+TGG | + | chr3_4:65561024-65561043 | Msa0514770:intron | 25.0% |
! | ATGAATAAGTGATTATGTGT+AGG | + | chr3_4:65561064-65561083 | Msa0514770:intron | 25.0% |
! | TTGAATATCTAGTATAGAGA+TGG | - | chr3_4:65561174-65561193 | None:intergenic | 25.0% |
!! | TTGGAGAAAATTTAACTTCT+CGG | + | chr3_4:65561266-65561285 | Msa0514770:CDS | 25.0% |
! | AACATTATAAGGATGTCTAA+TGG | - | chr3_4:65561341-65561360 | None:intergenic | 25.0% |
! | ATAGTCATTGTTTATACGAT+AGG | + | chr3_4:65561388-65561407 | Msa0514770:intron | 25.0% |
!! | CAGAATGTATATTTGAAGTT+TGG | + | chr3_4:65561499-65561518 | Msa0514770:intron | 25.0% |
!!! | AGAAGATAAATGTTTTTTGG+AGG | - | chr3_4:65561555-65561574 | None:intergenic | 25.0% |
! | CATAATATAAGATCACATGA+AGG | - | chr3_4:65561600-65561619 | None:intergenic | 25.0% |
! | TTATGTAATTCCAAATTGAC+AGG | + | chr3_4:65561615-65561634 | Msa0514770:intron | 25.0% |
! | TCACAATACAAATATGTTTC+CGG | - | chr3_4:65561772-65561791 | None:intergenic | 25.0% |
! | TTGTATTGTGAGTATCTAAT+TGG | + | chr3_4:65561781-65561800 | Msa0514770:intron | 25.0% |
! | GAAAGAGAAAAAAAAAAGGA+GGG | + | chr3_4:65563124-65563143 | Msa0514770:intron | 25.0% |
!! | GGAATTGTTGAATTTTTCTT+TGG | + | chr3_4:65563145-65563164 | Msa0514770:intron | 25.0% |
! | TATTTCCCCTGAATATATAA+AGG | + | chr3_4:65563258-65563277 | Msa0514770:CDS | 25.0% |
!!! | GCTATTAAGGTTATTGATTT+TGG | + | chr3_4:65563491-65563510 | Msa0514770:CDS | 25.0% |
! | CCATAAAATTGTAACAAATC+TGG | - | chr3_4:65563886-65563905 | None:intergenic | 25.0% |
!!! | CCAGATTTGTTACAATTTTA+TGG | + | chr3_4:65563883-65563902 | Msa0514770:intron | 25.0% |
!! | TTTGTATAGAGTTTGTCTTT+TGG | + | chr3_4:65563996-65564015 | Msa0514770:intron | 25.0% |
! | GTTACAAAAGAGATATCAAT+GGG | - | chr3_4:65564140-65564159 | None:intergenic | 25.0% |
! | TATGGAACAATTATAAACAC+AGG | - | chr3_4:65564287-65564306 | None:intergenic | 25.0% |
! | TTTGTATATGACAAAGTCTT+TGG | + | chr3_4:65564701-65564720 | Msa0514770:intron | 25.0% |
! | AAAAACTATTACGCAAAATC+GGG | - | chr3_4:65563843-65563862 | None:intergenic | 25.0% |
! | CCATAAAATTGTAACAAATC+TGG | - | chr3_4:65563886-65563905 | None:intergenic | 25.0% |
!!! | CCAGATTTGTTACAATTTTA+TGG | + | chr3_4:65563883-65563902 | Msa0514770:intron | 25.0% |
! | GTTACAAAAGAGATATCAAT+GGG | - | chr3_4:65564140-65564159 | None:intergenic | 25.0% |
! | TTACTCATCATATAGTGAAA+CGG | + | chr3_4:65566150-65566169 | Msa0514770:intron | 25.0% |
!!! | TAGCTTGTTTACTTGTTTTT+AGG | + | chr3_4:65566396-65566415 | Msa0514770:intron | 25.0% |
! | CGATGTTATTAACTGTAAAA+CGG | + | chr3_4:65566549-65566568 | Msa0514770:intron | 25.0% |
!!! | TAGATTGGTATTGTTTTTGT+TGG | + | chr3_4:65566697-65566716 | Msa0514770:intron | 25.0% |
! | TACTAAAATATGTTACAGAC+AGG | - | chr3_4:65566862-65566881 | None:intergenic | 25.0% |
CAAGTATAGCTCAAAGAAAA+AGG | + | chr3_4:65560907-65560926 | Msa0514770:intron | 30.0% | |
!!! | GTGGTGTTTTTATTTTGAAG+AGG | - | chr3_4:65561021-65561040 | None:intergenic | 30.0% |
!! | ATTAAGGGATTAGCTGAAAA+AGG | + | chr3_4:65561193-65561212 | Msa0514770:CDS | 30.0% |
! | GTAGAAAAGCTTTTTAATGG+TGG | - | chr3_4:65561307-65561326 | None:intergenic | 30.0% |
TAATTCCAAATTGACAGGAA+TGG | + | chr3_4:65561620-65561639 | Msa0514770:intron | 30.0% | |
GAACATTGTTTATATGACTC+TGG | - | chr3_4:65562015-65562034 | None:intergenic | 30.0% | |
AATGTTCTTCTCTTGTCTTT+AGG | + | chr3_4:65562028-65562047 | Msa0514770:intron | 30.0% | |
ATGTTCTTCTCTTGTCTTTA+GGG | + | chr3_4:65562029-65562048 | Msa0514770:intron | 30.0% | |
!!! | CTGAATTTTCAAGTCTGTAA+CGG | - | chr3_4:65562417-65562436 | None:intergenic | 30.0% |
GAAAATTCAGTAATCTGAAC+AGG | + | chr3_4:65562427-65562446 | Msa0514770:intron | 30.0% | |
! | AAAAAAAGCACAAGAATCAG+AGG | + | chr3_4:65562480-65562499 | Msa0514770:intron | 30.0% |
! | AATCAGAGGCATGTTATAAT+AGG | + | chr3_4:65562494-65562513 | Msa0514770:intron | 30.0% |
! | ATCAGAGGCATGTTATAATA+GGG | + | chr3_4:65562495-65562514 | Msa0514770:intron | 30.0% |
! | TTCTGAAAGTCATGATGAAA+AGG | + | chr3_4:65562528-65562547 | Msa0514770:intron | 30.0% |
GATATTGAATCTGGAAAAAG+AGG | + | chr3_4:65562596-65562615 | Msa0514770:intron | 30.0% | |
AAGATGAGATGACAGTAAAT+GGG | + | chr3_4:65562643-65562662 | Msa0514770:intron | 30.0% | |
AATACAAATAGTCCACACAA+AGG | - | chr3_4:65562669-65562688 | None:intergenic | 30.0% | |
! | TTTAAAAAGGGGGTATGATT+AGG | - | chr3_4:65562714-65562733 | None:intergenic | 30.0% |
AGATAGAATGTTTGACAGAT+TGG | - | chr3_4:65562839-65562858 | None:intergenic | 30.0% | |
GGAAAGAGAAAAAAAAAAGG+AGG | + | chr3_4:65563123-65563142 | Msa0514770:intron | 30.0% | |
!! | TATATTTTCAGGCTTCAAGT+CGG | - | chr3_4:65563233-65563252 | None:intergenic | 30.0% |
CTTCAAAATTGTGTTTGTGA+TGG | + | chr3_4:65563342-65563361 | Msa0514770:intron | 30.0% | |
!! | CAAAGTTTTAGCACACTTTT+AGG | - | chr3_4:65563396-65563415 | None:intergenic | 30.0% |
!!! | GGTTATTGATTTTGGTAGTA+CGG | + | chr3_4:65563499-65563518 | Msa0514770:CDS | 30.0% |
AGACAATATAGTTGTGATCT+TGG | - | chr3_4:65563535-65563554 | None:intergenic | 30.0% | |
AAACCTACCAAGAATAATCT+CGG | - | chr3_4:65563579-65563598 | None:intergenic | 30.0% | |
!!! | CTCTTATTTTCTTGGTAGTA+TGG | + | chr3_4:65563605-65563624 | Msa0514770:intron | 30.0% |
TTGTAGAAGTGACTCAAAAT+TGG | + | chr3_4:65563702-65563721 | Msa0514770:intron | 30.0% | |
AAGGGTTTAGAAATCAAACT+AGG | + | chr3_4:65563972-65563991 | Msa0514770:intron | 30.0% | |
AGGGTTTAGAAATCAAACTA+GGG | + | chr3_4:65563973-65563992 | Msa0514770:intron | 30.0% | |
CGTTACAAAAGAGATATCAA+TGG | - | chr3_4:65564141-65564160 | None:intergenic | 30.0% | |
TAACGTTACTCATCATATAG+TGG | + | chr3_4:65564156-65564175 | Msa0514770:intron | 30.0% | |
! | TTACTCATCATATAGTGGAA+CGG | + | chr3_4:65564161-65564180 | Msa0514770:intron | 30.0% |
!! | TGTTCCATACACTTTGATTT+TGG | + | chr3_4:65564298-65564317 | Msa0514770:intron | 30.0% |
AAAGGATAATCTAGTACCAT+GGG | + | chr3_4:65564417-65564436 | Msa0514770:intron | 30.0% | |
ATGAGTAGAGTTATTGCTTT+AGG | - | chr3_4:65564740-65564759 | None:intergenic | 30.0% | |
ATAACTCTACTCATTCAAGA+TGG | + | chr3_4:65564746-65564765 | Msa0514770:intron | 30.0% | |
! | CAACAAAATCATTGGTGATT+TGG | + | chr3_4:65564806-65564825 | Msa0514770:intron | 30.0% |
! | AATGGATTTCTTCATGAAGA+CGG | + | chr3_4:65565229-65565248 | Msa0514770:intron | 30.0% |
! | CAAACTACTCAAGGAATTTT+AGG | - | chr3_4:65565493-65565512 | None:intergenic | 30.0% |
CTAAAATTCCTTGAGTAGTT+TGG | + | chr3_4:65565491-65565510 | Msa0514770:intron | 30.0% | |
! | TCATCACTAATTTAGAGTCA+AGG | + | chr3_4:65565639-65565658 | Msa0514770:intron | 30.0% |
TTGTAGAAGTGACTCAAAAT+TGG | + | chr3_4:65563702-65563721 | Msa0514770:intron | 30.0% | |
!!! | GCTTTTTGTTCTGGAAAAAT+CGG | + | chr3_4:65565784-65565803 | Msa0514770:intron | 30.0% |
AAGGGTTTAGAAATCAAACT+AGG | + | chr3_4:65563972-65563991 | Msa0514770:intron | 30.0% | |
AGGGTTTAGAAATCAAACTA+GGG | + | chr3_4:65563973-65563992 | Msa0514770:intron | 30.0% | |
TTTGTATAGAGTTTGTCTCT+TGG | + | chr3_4:65565985-65566004 | Msa0514770:intron | 30.0% | |
CGTTACAAAAGAGATATCAA+TGG | - | chr3_4:65564141-65564160 | None:intergenic | 30.0% | |
TAAAAGTAGAAAACATCGAG+AGG | - | chr3_4:65566253-65566272 | None:intergenic | 30.0% | |
!! | TGTTCCATACACTTTGATTT+TGG | + | chr3_4:65564298-65564317 | Msa0514770:intron | 30.0% |
!!! | GTTTACTTGTTTTTAGGACT+TGG | + | chr3_4:65566402-65566421 | Msa0514770:intron | 30.0% |
ATGGCTTATGAATCACTATA+TGG | - | chr3_4:65566501-65566520 | None:intergenic | 30.0% | |
TTGATCAGAATATACTACAC+AGG | + | chr3_4:65566526-65566545 | Msa0514770:intron | 30.0% | |
ATTAACTGTAAAACGGTTTC+AGG | + | chr3_4:65566556-65566575 | Msa0514770:intron | 30.0% | |
TTAACTGTAAAACGGTTTCA+GGG | + | chr3_4:65566557-65566576 | Msa0514770:intron | 30.0% | |
!!! | TTATTTTGAAGAGGAAGCGA+TGG | - | chr3_4:65561012-65561031 | None:intergenic | 35.0% |
ACCACAAATGGAGCATAAAT+GGG | + | chr3_4:65561036-65561055 | Msa0514770:intron | 35.0% | |
TGATTATGTGTAGGCTCATT+CGG | + | chr3_4:65561073-65561092 | Msa0514770:intron | 35.0% | |
GTGAGTATCTAATTGGCATA+TGG | + | chr3_4:65561788-65561807 | Msa0514770:intron | 35.0% | |
CAAACTTCACGAACATTTGT+GGG | + | chr3_4:65561823-65561842 | Msa0514770:intron | 35.0% | |
AAACTTCACGAACATTTGTG+GGG | + | chr3_4:65561824-65561843 | Msa0514770:intron | 35.0% | |
GATGTTACAGGTATTTGAGA+TGG | + | chr3_4:65561874-65561893 | Msa0514770:intron | 35.0% | |
! | TTACAGGTATTTGAGATGGT+TGG | + | chr3_4:65561878-65561897 | Msa0514770:intron | 35.0% |
ATAATTGTCTTCCTAGCTCA+CGG | - | chr3_4:65561951-65561970 | None:intergenic | 35.0% | |
TGAGCTAGGAAGACAATTAT+TGG | + | chr3_4:65561951-65561970 | Msa0514770:CDS | 35.0% | |
ATGAACTTCAGACGATTACT+TGG | + | chr3_4:65562064-65562083 | Msa0514770:intron | 35.0% | |
TGAACTTCAGACGATTACTT+GGG | + | chr3_4:65562065-65562084 | Msa0514770:intron | 35.0% | |
TTCAAAAAACGGAACGTTAC+CGG | + | chr3_4:65562224-65562243 | Msa0514770:intron | 35.0% | |
! | TTTTTGTTCTCAACGCGAAA+AGG | - | chr3_4:65562308-65562327 | None:intergenic | 35.0% |
AGTAATCTGAACAGGAGAAA+AGG | + | chr3_4:65562435-65562454 | Msa0514770:intron | 35.0% | |
TGAAAGTCATGATGAAAAGG+AGG | + | chr3_4:65562531-65562550 | Msa0514770:intron | 35.0% | |
! | AGCGATTTTGTATGAGAAGA+AGG | + | chr3_4:65562558-65562577 | Msa0514770:intron | 35.0% |
CAGAAGCTAGATATTGAATC+TGG | + | chr3_4:65562587-65562606 | Msa0514770:intron | 35.0% | |
GAAGATGAGATGACAGTAAA+TGG | + | chr3_4:65562642-65562661 | Msa0514770:intron | 35.0% | |
!! | AAGGTTCTAAATAATGGTCG+CGG | - | chr3_4:65563073-65563092 | None:intergenic | 35.0% |
!! | GGATGCAAGGTTCTAAATAA+TGG | - | chr3_4:65563079-65563098 | None:intergenic | 35.0% |
! | TGACGATTGTGTTGCTAAAT+TGG | + | chr3_4:65563177-65563196 | Msa0514770:intron | 35.0% |
AGGCACCTTTATATATTCAG+GGG | - | chr3_4:65563266-65563285 | None:intergenic | 35.0% | |
CAGGCACCTTTATATATTCA+GGG | - | chr3_4:65563267-65563286 | None:intergenic | 35.0% | |
TCAGGCACCTTTATATATTC+AGG | - | chr3_4:65563268-65563287 | None:intergenic | 35.0% | |
! | AACACTCTAAAAATTGACCG+CGG | - | chr3_4:65563313-65563332 | None:intergenic | 35.0% |
CAAAATTGTGTTTGTGATGG+TGG | + | chr3_4:65563345-65563364 | Msa0514770:intron | 35.0% | |
ATCACAAAATCTTAAACCGC+AGG | + | chr3_4:65563423-65563442 | Msa0514770:intron | 35.0% | |
ACCTTAATAGCACTTGACTT+TGG | - | chr3_4:65563482-65563501 | None:intergenic | 35.0% | |
TTGTCTCAACACGACATTAT+AGG | + | chr3_4:65563549-65563568 | Msa0514770:CDS | 35.0% | |
AACCTACCAAGAATAATCTC+GGG | - | chr3_4:65563578-65563597 | None:intergenic | 35.0% | |
ACTCTGAATGTGAAGATCAT+AGG | - | chr3_4:65563651-65563670 | None:intergenic | 35.0% | |
AGTGACTCAAAATTGGAGTT+TGG | + | chr3_4:65563709-65563728 | Msa0514770:intron | 35.0% | |
!! | TATTGCTCTGGAAAAATCGA+CGG | + | chr3_4:65563818-65563837 | Msa0514770:intron | 35.0% |
AGTGTAAACCTTGAGATAGA+GGG | + | chr3_4:65563940-65563959 | Msa0514770:intron | 35.0% | |
! | TTGTCTTTTGGCAACAAACT+AGG | + | chr3_4:65564008-65564027 | Msa0514770:intron | 35.0% |
! | TGTCTTTTGGCAACAAACTA+GGG | + | chr3_4:65564009-65564028 | Msa0514770:intron | 35.0% |
! | TTTGAAGGTTGATTCACCTT+GGG | + | chr3_4:65564032-65564051 | Msa0514770:intron | 35.0% |
AATCCTAATAGTGTTTCCCA+AGG | - | chr3_4:65564051-65564070 | None:intergenic | 35.0% | |
ACTATTAGGATTGAGTCTCT+TGG | + | chr3_4:65564059-65564078 | Msa0514770:intron | 35.0% | |
!! | AAGAATTTGTTGACCCAGTT+TGG | - | chr3_4:65564223-65564242 | None:intergenic | 35.0% |
GCAACCAAAATCAAAGTGTA+TGG | - | chr3_4:65564305-65564324 | None:intergenic | 35.0% | |
AAACTTGATGTGTGGATCAA+GGG | - | chr3_4:65564336-65564355 | None:intergenic | 35.0% | |
CCAATAACAAACTTGATGTG+TGG | - | chr3_4:65564344-65564363 | None:intergenic | 35.0% | |
!! | CCACACATCAAGTTTGTTAT+TGG | + | chr3_4:65564341-65564360 | Msa0514770:intron | 35.0% |
CAAAGGATAATCTAGTACCA+TGG | + | chr3_4:65564416-65564435 | Msa0514770:intron | 35.0% | |
TGGGATATTGAGAAGTTTAC+CGG | + | chr3_4:65564447-65564466 | Msa0514770:intron | 35.0% | |
! | TTTACCGGAGATAACGATTT+TGG | + | chr3_4:65564462-65564481 | Msa0514770:intron | 35.0% |
! | TTACCGGAGATAACGATTTT+GGG | + | chr3_4:65564463-65564482 | Msa0514770:intron | 35.0% |
TAACCCAAAATCGTTATCTC+CGG | - | chr3_4:65564469-65564488 | None:intergenic | 35.0% | |
!!! | GAGATAACGATTTTGGGTTA+TGG | + | chr3_4:65564469-65564488 | Msa0514770:intron | 35.0% |
!!! | TAACGATTTTGGGTTATGGA+AGG | + | chr3_4:65564473-65564492 | Msa0514770:intron | 35.0% |
! | AAAGTGTGAGAAAGCTTTGA+AGG | + | chr3_4:65564524-65564543 | Msa0514770:intron | 35.0% |
!! | AAGTGTGAGAAAGCTTTGAA+GGG | + | chr3_4:65564525-65564544 | Msa0514770:intron | 35.0% |
GTGGAGTTCAACAAAATCAT+TGG | + | chr3_4:65564798-65564817 | Msa0514770:intron | 35.0% | |
AAGAATACTCATAATCAGCC+TGG | + | chr3_4:65564991-65565010 | Msa0514770:intron | 35.0% | |
AAGAATACTCATAATCAGCC+TGG | + | chr3_4:65564991-65565010 | Msa0514770:intron | 35.0% | |
! | TCATTTGCTAGTTGAGAGAT+TGG | + | chr3_4:65565124-65565143 | Msa0514770:intron | 35.0% |
AGGTTGAAGAATGTATAGCA+CGG | + | chr3_4:65565264-65565283 | Msa0514770:intron | 35.0% | |
GAATTACCCTAAAAGTCCAA+GGG | + | chr3_4:65565293-65565312 | Msa0514770:intron | 35.0% | |
CAAACTACACTAGGAATTTC+AGG | - | chr3_4:65565397-65565416 | None:intergenic | 35.0% | |
CTGAAATTCCTAGTGTAGTT+TGG | + | chr3_4:65565395-65565414 | Msa0514770:intron | 35.0% | |
! | TCACTAATTTAGAGTCAAGG+TGG | + | chr3_4:65565642-65565661 | Msa0514770:intron | 35.0% |
AGTGACTCAAAATTGGAGTT+TGG | + | chr3_4:65563709-65563728 | Msa0514770:intron | 35.0% | |
AGTGTAAACCTTGAGATAGA+GGG | + | chr3_4:65563940-65563959 | Msa0514770:intron | 35.0% | |
! | TTTGAAGGTTGATTCACCTT+GGG | + | chr3_4:65564032-65564051 | Msa0514770:intron | 35.0% |
AATCCTAATAGTGTTTCCCA+AGG | - | chr3_4:65564051-65564070 | None:intergenic | 35.0% | |
ACTATTAGGATTGAGTCTCT+TGG | + | chr3_4:65564059-65564078 | Msa0514770:intron | 35.0% | |
TCATCATATAGTGAAACGGA+GGG | + | chr3_4:65566154-65566173 | Msa0514770:intron | 35.0% | |
!! | AAGAATTTGTTGACCCAGTT+TGG | - | chr3_4:65564223-65564242 | None:intergenic | 35.0% |
GCAACCAAAATCAAAGTGTA+TGG | - | chr3_4:65564305-65564324 | None:intergenic | 35.0% | |
CCAATAACAAACTTGATGTG+TGG | - | chr3_4:65564344-65564363 | None:intergenic | 35.0% | |
!! | CCACACATCAAGTTTGTTAT+TGG | + | chr3_4:65564341-65564360 | Msa0514770:intron | 35.0% |
!!! | ACTTGTTTTTAGGACTTGGT+TGG | + | chr3_4:65566406-65566425 | Msa0514770:intron | 35.0% |
! | GGAATTTTCTGTGTGACATA+TGG | + | chr3_4:65566427-65566446 | Msa0514770:intron | 35.0% |
!!! | ATGGAGTATTGGTTGCATTT+TGG | + | chr3_4:65566446-65566465 | Msa0514770:intron | 35.0% |
!!! | CATTTTGGTTGAGTTGAGTT+CGG | + | chr3_4:65566461-65566480 | Msa0514770:intron | 35.0% |
GCTTATGAATCACTATATGG+AGG | - | chr3_4:65566498-65566517 | None:intergenic | 35.0% | |
! | TGCTCTTTTCAACATGTGTT+GGG | - | chr3_4:65566654-65566673 | None:intergenic | 35.0% |
! | TGCAAAGAAGTATGTCAGAA+GGG | + | chr3_4:65566765-65566784 | Msa0514770:CDS | 35.0% |
AAGTAGAAACACCTAGAATG+TGG | - | chr3_4:65566909-65566928 | None:intergenic | 35.0% | |
! | ACTTTTCTCTTTCCAGAATC+TGG | + | chr3_4:65566925-65566944 | Msa0514770:intron | 35.0% |
!!! | TCAAGCATCCCTTTTTTACT+GGG | + | chr3_4:65567047-65567066 | Msa0514770:CDS | 35.0% |
TAATGCTCCCCAGTAAAAAA+GGG | - | chr3_4:65567058-65567077 | None:intergenic | 35.0% | |
CACCACAAATGGAGCATAAA+TGG | + | chr3_4:65561035-65561054 | Msa0514770:intron | 40.0% | |
TCCCATTTATGCTCCATTTG+TGG | - | chr3_4:65561040-65561059 | None:intergenic | 40.0% | |
GATTATGTGTAGGCTCATTC+GGG | + | chr3_4:65561074-65561093 | Msa0514770:intron | 40.0% | |
ATTATGTGTAGGCTCATTCG+GGG | + | chr3_4:65561075-65561094 | Msa0514770:intron | 40.0% | |
TAGAGATGGTTACAGAGATC+AGG | - | chr3_4:65561160-65561179 | None:intergenic | 40.0% | |
TTTGTCATCATCTCGCCATT+GGG | - | chr3_4:65561224-65561243 | None:intergenic | 40.0% | |
GCTCAGCAAGCAACATTATA+AGG | - | chr3_4:65561352-65561371 | None:intergenic | 40.0% | |
ATACATTCTGAGCATGCATG+TGG | - | chr3_4:65561489-65561508 | None:intergenic | 40.0% | |
GATTGCCATTCCTGTCAATT+TGG | - | chr3_4:65561628-65561647 | None:intergenic | 40.0% | |
GCTGGTAGTACATTATACAC+AGG | - | chr3_4:65561669-65561688 | None:intergenic | 40.0% | |
CACAAGCTTCAAATAACAGC+TGG | - | chr3_4:65561687-65561706 | None:intergenic | 40.0% | |
CCACAAATGTTCGTGAAGTT+TGG | - | chr3_4:65561825-65561844 | None:intergenic | 40.0% | |
CCAAACTTCACGAACATTTG+TGG | + | chr3_4:65561822-65561841 | Msa0514770:intron | 40.0% | |
AACTTCACGAACATTTGTGG+GGG | + | chr3_4:65561825-65561844 | Msa0514770:intron | 40.0% | |
GGACAAGATCAACTGGAAAT+GGG | - | chr3_4:65561930-65561949 | None:intergenic | 40.0% | |
GGGAAAAAGAAGTGAACAGT+TGG | - | chr3_4:65562112-65562131 | None:intergenic | 40.0% | |
AGATATTTCACATCCCACCA+AGG | + | chr3_4:65562200-65562219 | Msa0514770:intron | 40.0% | |
!!! | CCGTTTTTTGAAACCTTGGT+GGG | - | chr3_4:65562216-65562235 | None:intergenic | 40.0% |
CCCACCAAGGTTTCAAAAAA+CGG | + | chr3_4:65562213-65562232 | Msa0514770:intron | 40.0% | |
!!! | TCCGTTTTTTGAAACCTTGG+TGG | - | chr3_4:65562217-65562236 | None:intergenic | 40.0% |
!!! | CGTTCCGTTTTTTGAAACCT+TGG | - | chr3_4:65562220-65562239 | None:intergenic | 40.0% |
TCAAAAAACGGAACGTTACC+GGG | + | chr3_4:65562225-65562244 | Msa0514770:intron | 40.0% | |
AAAAGGTCCAAAAACGGTCA+CGG | - | chr3_4:65562291-65562310 | None:intergenic | 40.0% | |
AACGCGAAAAGGTCCAAAAA+CGG | - | chr3_4:65562297-65562316 | None:intergenic | 40.0% | |
TTTGTATGAGAAGAAGGCAG+AGG | + | chr3_4:65562564-65562583 | Msa0514770:intron | 40.0% | |
GATACAAATAACGGTCTTCG+CGG | - | chr3_4:65563008-65563027 | None:intergenic | 40.0% | |
CAAATTCCAACTCTCTCATG+GGG | - | chr3_4:65563104-65563123 | None:intergenic | 40.0% | |
CCAAATTCCAACTCTCTCAT+GGG | - | chr3_4:65563105-65563124 | None:intergenic | 40.0% | |
TCCAAATTCCAACTCTCTCA+TGG | - | chr3_4:65563106-65563125 | None:intergenic | 40.0% | |
!! | TATAAAGGTGCCTGACTACA+AGG | + | chr3_4:65563273-65563292 | Msa0514770:CDS | 40.0% |
AGCAGAAATACCTTGTAGTC+AGG | - | chr3_4:65563286-65563305 | None:intergenic | 40.0% | |
! | CACTTTTAGGCATGCTGTAA+AGG | - | chr3_4:65563383-65563402 | None:intergenic | 40.0% |
! | TTACAAGTGGTTCCCTCTTT+TGG | - | chr3_4:65563452-65563471 | None:intergenic | 40.0% |
! | GCCAAAGTCAAGTGCTATTA+AGG | + | chr3_4:65563478-65563497 | Msa0514770:CDS | 40.0% |
ACCTACCAAGAATAATCTCG+GGG | - | chr3_4:65563577-65563596 | None:intergenic | 40.0% | |
AGGTGTGGTAGAGACAATAT+AGG | - | chr3_4:65563631-65563650 | None:intergenic | 40.0% | |
GAATGTGAAGATCATAGGTG+TGG | - | chr3_4:65563646-65563665 | None:intergenic | 40.0% | |
GAGTGCAAAATCATGTTTGC+TGG | + | chr3_4:65563731-65563750 | Msa0514770:intron | 40.0% | |
TTTGCTGGAAGACCCAAAAT+TGG | + | chr3_4:65563746-65563765 | Msa0514770:intron | 40.0% | |
CAGTGTAAACCTTGAGATAG+AGG | + | chr3_4:65563939-65563958 | Msa0514770:intron | 40.0% | |
GTGTAAACCTTGAGATAGAG+GGG | + | chr3_4:65563941-65563960 | Msa0514770:intron | 40.0% | |
TGTAAACCTTGAGATAGAGG+GGG | + | chr3_4:65563942-65563961 | Msa0514770:intron | 40.0% | |
! | GTTTGAAGGTTGATTCACCT+TGG | + | chr3_4:65564031-65564050 | Msa0514770:intron | 40.0% |
TCACCTTGGGAAACACTATT+AGG | + | chr3_4:65564045-65564064 | Msa0514770:intron | 40.0% | |
AGGATTGAGTCTCTTGGTTA+CGG | + | chr3_4:65564065-65564084 | Msa0514770:intron | 40.0% | |
! | TCATCATATAGTGGAACGGA+GGG | + | chr3_4:65564165-65564184 | Msa0514770:intron | 40.0% |
TCCAAATTGACCTAGTATGG+GGG | - | chr3_4:65564200-65564219 | None:intergenic | 40.0% | |
GTCCAAATTGACCTAGTATG+GGG | - | chr3_4:65564201-65564220 | None:intergenic | 40.0% | |
GGTCCAAATTGACCTAGTAT+GGG | - | chr3_4:65564202-65564221 | None:intergenic | 40.0% | |
TGGTCCAAATTGACCTAGTA+TGG | - | chr3_4:65564203-65564222 | None:intergenic | 40.0% | |
TAGGTCAATTTGGACCAAAC+TGG | + | chr3_4:65564206-65564225 | Msa0514770:intron | 40.0% | |
AGGTCAATTTGGACCAAACT+GGG | + | chr3_4:65564207-65564226 | Msa0514770:intron | 40.0% | |
CAAAAGTAGAAAACAGCGAG+AGG | - | chr3_4:65564264-65564283 | None:intergenic | 40.0% | |
CAAACTTGATGTGTGGATCA+AGG | - | chr3_4:65564337-65564356 | None:intergenic | 40.0% | |
CTCATCGAATTCGCAACAAT+TGG | + | chr3_4:65564372-65564391 | Msa0514770:intron | 40.0% | |
TGGGTTATGGAAGGTAAAGA+TGG | + | chr3_4:65564482-65564501 | Msa0514770:intron | 40.0% | |
ATGGAAGGTAAAGATGGAAG+CGG | + | chr3_4:65564488-65564507 | Msa0514770:intron | 40.0% | |
AGTTTCGAGAGAAGTAGCAA+AGG | + | chr3_4:65564641-65564660 | Msa0514770:intron | 40.0% | |
ACTCTACTCATTCAAGATGG+TGG | + | chr3_4:65564749-65564768 | Msa0514770:intron | 40.0% | |
! | TGGTGATTTGGAGAACATTG+AGG | + | chr3_4:65564818-65564837 | Msa0514770:intron | 40.0% |
! | TGTTGTTTGGAGGATGAAGA+AGG | + | chr3_4:65564876-65564895 | Msa0514770:intron | 40.0% |
TTAAACACTCAACATCAGCC+TGG | + | chr3_4:65564956-65564975 | Msa0514770:intron | 40.0% | |
TACTCATGATCTACCTGTTG+AGG | + | chr3_4:65565066-65565085 | Msa0514770:intron | 40.0% | |
TTTCAAGGTGGAAGACATAG+TGG | + | chr3_4:65565094-65565113 | Msa0514770:intron | 40.0% | |
TTCAAGGTGGAAGACATAGT+GGG | + | chr3_4:65565095-65565114 | Msa0514770:intron | 40.0% | |
TAGTTGAGAGATTGGAAGCT+CGG | + | chr3_4:65565132-65565151 | Msa0514770:intron | 40.0% | |
GATTTCTTCATGAAGACGGA+AGG | + | chr3_4:65565233-65565252 | Msa0514770:intron | 40.0% | |
GCTATACATTCTTCAACCTC+CGG | - | chr3_4:65565263-65565282 | None:intergenic | 40.0% | |
GGAATTACCCTAAAAGTCCA+AGG | + | chr3_4:65565292-65565311 | Msa0514770:intron | 40.0% | |
! | CAATCACCCTTGGACTTTTA+GGG | - | chr3_4:65565302-65565321 | None:intergenic | 40.0% |
! | TGGATGCAAGGTGATTTTCA+AGG | + | chr3_4:65565320-65565339 | Msa0514770:intron | 40.0% |
!! | CAAGGTGATTTTCAAGGAAG+CGG | + | chr3_4:65565326-65565345 | Msa0514770:intron | 40.0% |
!! | AAGGTGATTTTCAAGGAAGC+GGG | + | chr3_4:65565327-65565346 | Msa0514770:intron | 40.0% |
TGTCTCGTATTGAAGAGGTA+TGG | + | chr3_4:65565353-65565372 | Msa0514770:intron | 40.0% | |
CCTTGTATCCAAACTACACT+AGG | - | chr3_4:65565406-65565425 | None:intergenic | 40.0% | |
CCTAGTGTAGTTTGGATACA+AGG | + | chr3_4:65565403-65565422 | Msa0514770:intron | 40.0% | |
GAGGTTAAGGTGTGTACTTA+TGG | + | chr3_4:65565462-65565481 | Msa0514770:intron | 40.0% | |
TTGGACACAAGGATCTTCAA+AGG | + | chr3_4:65565510-65565529 | Msa0514770:intron | 40.0% | |
TGGACACAAGGATCTTCAAA+GGG | + | chr3_4:65565511-65565530 | Msa0514770:intron | 40.0% | |
TGTAAACTTGTGGAGCTACT+TGG | + | chr3_4:65565568-65565587 | Msa0514770:intron | 40.0% | |
GAGTGCAAAATCATGTTTGC+TGG | + | chr3_4:65563731-65563750 | Msa0514770:intron | 40.0% | |
TTTGCTGGAAGACCCAAAAT+CGG | + | chr3_4:65563746-65563765 | Msa0514770:intron | 40.0% | |
!!! | GAAAAATCGGCTGTCGATTT+TGG | + | chr3_4:65565797-65565816 | Msa0514770:intron | 40.0% |
CAGTGTAAACCTTGAGATAG+AGG | + | chr3_4:65563939-65563958 | Msa0514770:intron | 40.0% | |
GTGTAAACCTTGAGATAGAG+GGG | + | chr3_4:65563941-65563960 | Msa0514770:intron | 40.0% | |
TGTAAACCTTGAGATAGAGG+GGG | + | chr3_4:65563942-65563961 | Msa0514770:intron | 40.0% | |
TTGTCTCTTGGCAACAAACT+AGG | + | chr3_4:65565997-65566016 | Msa0514770:intron | 40.0% | |
TGTCTCTTGGCAACAAACTA+GGG | + | chr3_4:65565998-65566017 | Msa0514770:intron | 40.0% | |
! | GTTTGAAGGTTGATTCACCT+TGG | + | chr3_4:65564031-65564050 | Msa0514770:intron | 40.0% |
TCACCTTGGGAAACACTATT+AGG | + | chr3_4:65564045-65564064 | Msa0514770:intron | 40.0% | |
AGGATTGAGTCTCTTGGTTA+CGG | + | chr3_4:65564065-65564084 | Msa0514770:intron | 40.0% | |
CTCATCATATAGTGAAACGG+AGG | + | chr3_4:65566153-65566172 | Msa0514770:intron | 40.0% | |
TAGGTCAATTTGGACCAAAC+TGG | + | chr3_4:65564206-65564225 | Msa0514770:intron | 40.0% | |
AGGTCAATTTGGACCAAACT+GGG | + | chr3_4:65564207-65564226 | Msa0514770:intron | 40.0% | |
AAACTTGATGTGTGGAGCAA+GGG | - | chr3_4:65566325-65566344 | None:intergenic | 40.0% | |
CTGTGTGACATATGGAGTAT+TGG | + | chr3_4:65566435-65566454 | Msa0514770:intron | 40.0% | |
! | TTTAGAGCATCTAGCCATGA+TGG | + | chr3_4:65566607-65566626 | Msa0514770:intron | 40.0% |
! | TCAACATGTGTTGGGGTATT+GGG | - | chr3_4:65566646-65566665 | None:intergenic | 40.0% |
TTCAACATGTGTTGGGGTAT+TGG | - | chr3_4:65566647-65566666 | None:intergenic | 40.0% | |
! | GCTCTTTTCAACATGTGTTG+GGG | - | chr3_4:65566653-65566672 | None:intergenic | 40.0% |
! | CTGCTCTTTTCAACATGTGT+TGG | - | chr3_4:65566655-65566674 | None:intergenic | 40.0% |
! | CTGCAAAGAAGTATGTCAGA+AGG | + | chr3_4:65566764-65566783 | Msa0514770:CDS | 40.0% |
! | GCAAAGAAGTATGTCAGAAG+GGG | + | chr3_4:65566766-65566785 | Msa0514770:CDS | 40.0% |
TCTCTCTTGTTCCACATTCT+AGG | + | chr3_4:65566895-65566914 | Msa0514770:intron | 40.0% | |
GATCTTCTTGATCTCTTGCA+GGG | + | chr3_4:65566977-65566996 | Msa0514770:CDS | 40.0% | |
!!! | CTCAAGCATCCCTTTTTTAC+TGG | + | chr3_4:65567046-65567065 | Msa0514770:CDS | 40.0% |
!!! | CAAGCATCCCTTTTTTACTG+GGG | + | chr3_4:65567048-65567067 | Msa0514770:CDS | 40.0% |
GTAATGCTCCCCAGTAAAAA+AGG | - | chr3_4:65567059-65567078 | None:intergenic | 40.0% | |
CTCATGTCGAAGTTAGCTAC+AGG | + | chr3_4:65560884-65560903 | Msa0514770:intron | 45.0% | |
GCTCATTCGGGGATATATTG+TGG | + | chr3_4:65561086-65561105 | Msa0514770:CDS | 45.0% | |
AACAAGCTATGGAACGCTGA+GGG | + | chr3_4:65561129-65561148 | Msa0514770:CDS | 45.0% | |
CTGAAAAAGGTTCTCCCCAA+TGG | + | chr3_4:65561206-65561225 | Msa0514770:CDS | 45.0% | |
TTGTCATCATCTCGCCATTG+GGG | - | chr3_4:65561223-65561242 | None:intergenic | 45.0% | |
CTTTGTCATCATCTCGCCAT+TGG | - | chr3_4:65561225-65561244 | None:intergenic | 45.0% | |
TGGCGAGATGATGACAAAGA+TGG | + | chr3_4:65561226-65561245 | Msa0514770:CDS | 45.0% | |
CTCCAAGCGCAAACATGTAA+TGG | - | chr3_4:65561252-65561271 | None:intergenic | 45.0% | |
GCTGTGTTCAAATACGCAAC+TGG | + | chr3_4:65561735-65561754 | Msa0514770:intron | 45.0% | |
ATGGGCGATAACTGTTCTTC+CGG | - | chr3_4:65561912-65561931 | None:intergenic | 45.0% | |
CGGACAAGATCAACTGGAAA+TGG | - | chr3_4:65561931-65561950 | None:intergenic | 45.0% | |
!! | CTGCCGATACCGATTTGTAA+CGG | - | chr3_4:65562265-65562284 | None:intergenic | 45.0% |
TCACAGTCAAATCGCCGTTA+CGG | + | chr3_4:65562328-65562347 | Msa0514770:intron | 45.0% | |
ACAGTAAATGGGCCTTTGTG+TGG | + | chr3_4:65562654-65562673 | Msa0514770:intron | 45.0% | |
GGACGCTGCGATACAAATAA+CGG | - | chr3_4:65563017-65563036 | None:intergenic | 45.0% | |
CCCATGAGAGAGTTGGAATT+TGG | + | chr3_4:65563102-65563121 | Msa0514770:intron | 45.0% | |
CTTTGGCAGTCTCTTACAAG+TGG | - | chr3_4:65563465-65563484 | None:intergenic | 45.0% | |
CCTACCAAGAATAATCTCGG+GGG | - | chr3_4:65563576-65563595 | None:intergenic | 45.0% | |
! | CAAAATCGGCCGCCAATTTT+GGG | - | chr3_4:65563761-65563780 | None:intergenic | 45.0% |
GGCAACAAACTAGGGTTTGA+AGG | + | chr3_4:65564017-65564036 | Msa0514770:intron | 45.0% | |
GGATTGAGTCTCTTGGTTAC+GGG | + | chr3_4:65564066-65564085 | Msa0514770:intron | 45.0% | |
! | GCTGCGATTTGGGTAGAATT+AGG | + | chr3_4:65564094-65564113 | Msa0514770:intron | 45.0% |
! | GCGATTTGGGTAGAATTAGG+CGG | + | chr3_4:65564097-65564116 | Msa0514770:intron | 45.0% |
! | CGATTTGGGTAGAATTAGGC+GGG | + | chr3_4:65564098-65564117 | Msa0514770:intron | 45.0% |
! | CTCATCATATAGTGGAACGG+AGG | + | chr3_4:65564164-65564183 | Msa0514770:intron | 45.0% |
TCCCCCATACTAGGTCAATT+TGG | + | chr3_4:65564196-65564215 | Msa0514770:intron | 45.0% | |
TAGTACCATGGGTTCGAAGT+GGG | + | chr3_4:65564428-65564447 | Msa0514770:intron | 45.0% | |
AATATCCCACTTCGAACCCA+TGG | - | chr3_4:65564436-65564455 | None:intergenic | 45.0% | |
!! | GAGAAAGCTTTGAAGGGTGA+AGG | + | chr3_4:65564531-65564550 | Msa0514770:intron | 45.0% |
AGTAGCAAAGGATACAACCG+CGG | + | chr3_4:65564653-65564672 | Msa0514770:intron | 45.0% | |
!! | ATTCAAGATGGTGGAGCCAA+TGG | + | chr3_4:65564758-65564777 | Msa0514770:intron | 45.0% |
! | GAACATTGAGGTGCGTTTTG+AGG | + | chr3_4:65564830-65564849 | Msa0514770:intron | 45.0% |
!! | TCTGATGGTGTGGTGTTGTT+TGG | + | chr3_4:65564863-65564882 | Msa0514770:intron | 45.0% |
TACTCATAATCAGCCTGGAG+AGG | + | chr3_4:65564996-65565015 | Msa0514770:intron | 45.0% | |
TACTCATAATCAGCCTGGAG+AGG | + | chr3_4:65564996-65565015 | Msa0514770:intron | 45.0% | |
TCATGATCTACCTGTTGAGG+TGG | + | chr3_4:65565069-65565088 | Msa0514770:intron | 45.0% | |
TTAGGTGGAGTTGAACACAC+CGG | + | chr3_4:65565157-65565176 | Msa0514770:intron | 45.0% | |
TATGCTCTAGTGGTGAGCAA+TGG | + | chr3_4:65565211-65565230 | Msa0514770:intron | 45.0% | |
AGAATGTATAGCACGGCTTG+TGG | + | chr3_4:65565271-65565290 | Msa0514770:intron | 45.0% | |
! | CCAATCACCCTTGGACTTTT+AGG | - | chr3_4:65565303-65565322 | None:intergenic | 45.0% |
CCTAAAAGTCCAAGGGTGAT+TGG | + | chr3_4:65565300-65565319 | Msa0514770:intron | 45.0% | |
GGAGATGTCTCGTATTGAAG+AGG | + | chr3_4:65565348-65565367 | Msa0514770:intron | 45.0% | |
GGATACAAGGATCTTCGAGA+AGG | + | chr3_4:65565416-65565435 | Msa0514770:intron | 45.0% | |
TACAAGGATCTTCGAGAAGG+CGG | + | chr3_4:65565419-65565438 | Msa0514770:intron | 45.0% | |
ACCTTAACCTCTTCAGCGAT+CGG | - | chr3_4:65565453-65565472 | None:intergenic | 45.0% | |
CCTTGTGTCCAAACTACTCA+AGG | - | chr3_4:65565502-65565521 | None:intergenic | 45.0% | |
CCTTGAGTAGTTTGGACACA+AGG | + | chr3_4:65565499-65565518 | Msa0514770:intron | 45.0% | |
GGACACAAGGATCTTCAAAG+GGG | + | chr3_4:65565512-65565531 | Msa0514770:intron | 45.0% | |
TTCCGATGGTTGAAGAGGTT+AGG | + | chr3_4:65565544-65565563 | Msa0514770:intron | 45.0% | |
TCCGATGGTTGAAGAGGTTA+GGG | + | chr3_4:65565545-65565564 | Msa0514770:intron | 45.0% | |
ACCCTAACCTCTTCAACCAT+CGG | - | chr3_4:65565549-65565568 | None:intergenic | 45.0% | |
GAGGTTAGGGTGTAAACTTG+TGG | + | chr3_4:65565558-65565577 | Msa0514770:intron | 45.0% | |
!! | TACTTGGTGTAGTGGGAACA+AGG | + | chr3_4:65565584-65565603 | Msa0514770:intron | 45.0% |
!! | ACTTGGTGTAGTGGGAACAA+GGG | + | chr3_4:65565585-65565604 | Msa0514770:intron | 45.0% |
!! | AGCAAGGTGGTTGATGGTTT+GGG | + | chr3_4:65565615-65565634 | Msa0514770:intron | 45.0% |
CAGAACAAAAAGCCTCCCAA+AGG | - | chr3_4:65565777-65565796 | None:intergenic | 45.0% | |
!! | CTTTGGGAGGCTTTTTGTTC+TGG | + | chr3_4:65565775-65565794 | Msa0514770:intron | 45.0% |
!!! | CGGCTGTCGATTTTGGAAAT+CGG | + | chr3_4:65565804-65565823 | Msa0514770:intron | 45.0% |
!!! | GGCTGTCGATTTTGGAAATC+GGG | + | chr3_4:65565805-65565824 | Msa0514770:intron | 45.0% |
!!! | GCTGTCGATTTTGGAAATCG+GGG | + | chr3_4:65565806-65565825 | Msa0514770:intron | 45.0% |
GGCAACAAACTAGGGTTTGA+AGG | + | chr3_4:65564017-65564036 | Msa0514770:intron | 45.0% | |
GGATTGAGTCTCTTGGTTAC+GGG | + | chr3_4:65564066-65564085 | Msa0514770:intron | 45.0% | |
TCCAAATTGACCTAGTCTGG+GGG | - | chr3_4:65566189-65566208 | None:intergenic | 45.0% | |
GTCCAAATTGACCTAGTCTG+GGG | - | chr3_4:65566190-65566209 | None:intergenic | 45.0% | |
GGTCCAAATTGACCTAGTCT+GGG | - | chr3_4:65566191-65566210 | None:intergenic | 45.0% | |
TGGTCCAAATTGACCTAGTC+TGG | - | chr3_4:65566192-65566211 | None:intergenic | 45.0% | |
CAAACTTGATGTGTGGAGCA+AGG | - | chr3_4:65566326-65566345 | None:intergenic | 45.0% | |
GAGTTGAGTTCGGTATGTTG+AGG | + | chr3_4:65566471-65566490 | Msa0514770:intron | 45.0% | |
! | AGAAGTATGTCAGAAGGGGT+AGG | + | chr3_4:65566770-65566789 | Msa0514770:CDS | 45.0% |
!! | AGTCTCTCGAGAAAGCATCA+AGG | + | chr3_4:65566813-65566832 | Msa0514770:CDS | 45.0% |
ATGTTACAGACAGGAAGACG+AGG | - | chr3_4:65566853-65566872 | None:intergenic | 45.0% | |
GGATCTTCTTGATCTCTTGC+AGG | + | chr3_4:65566976-65566995 | Msa0514770:CDS | 45.0% | |
ATCTCTTGCAGGGTCTACTT+CGG | + | chr3_4:65566987-65567006 | Msa0514770:CDS | 45.0% | |
GCTAGTGCGACAACAAGCTA+TGG | + | chr3_4:65561118-65561137 | Msa0514770:CDS | 50.0% | |
CAACAAGCTATGGAACGCTG+AGG | + | chr3_4:65561128-65561147 | Msa0514770:CDS | 50.0% | |
GGCCATTACATGTTTGCGCT+TGG | + | chr3_4:65561247-65561266 | Msa0514770:CDS | 50.0% | |
!! | GCAACTGGTTTGACGACTAC+CGG | + | chr3_4:65561750-65561769 | Msa0514770:CDS | 50.0% |
ATAACTGTTCTTCCGGGGCT+TGG | - | chr3_4:65561905-65561924 | None:intergenic | 50.0% | |
TGGGCGATAACTGTTCTTCC+GGG | - | chr3_4:65561911-65561930 | None:intergenic | 50.0% | |
AGCTCACGGACAAGATCAAC+TGG | - | chr3_4:65561937-65561956 | None:intergenic | 50.0% | |
GTTGATCTTGTCCGTGAGCT+AGG | + | chr3_4:65561937-65561956 | Msa0514770:CDS | 50.0% | |
!! | TACCGATTTGTAACGGCCGT+CGG | - | chr3_4:65562258-65562277 | None:intergenic | 50.0% |
CGGCCGTTACAAATCGGTAT+CGG | + | chr3_4:65562259-65562278 | Msa0514770:intron | 50.0% | |
GCCGTTAAGGAACGCTGTTA+CGG | + | chr3_4:65562350-65562369 | Msa0514770:intron | 50.0% | |
CCCGTAACAGCGTTCCTTAA+CGG | - | chr3_4:65562354-65562373 | None:intergenic | 50.0% | |
CCGTTAAGGAACGCTGTTAC+GGG | + | chr3_4:65562351-65562370 | Msa0514770:intron | 50.0% | |
! | GTCTGTAACGGAGTGCGTAA+CGG | - | chr3_4:65562405-65562424 | None:intergenic | 50.0% |
CGTTAAGGTTGTCGCGGTTT+CGG | - | chr3_4:65563047-65563066 | None:intergenic | 50.0% | |
TTCCAACTCTCTCATGGGGT+GGG | - | chr3_4:65563100-65563119 | None:intergenic | 50.0% | |
ATTCCAACTCTCTCATGGGG+TGG | - | chr3_4:65563101-65563120 | None:intergenic | 50.0% | |
TTTCAGGCTTCAAGTCGGTG+TGG | - | chr3_4:65563228-65563247 | None:intergenic | 50.0% | |
! | AGGTATTTCTGCTCTCTCCG+CGG | + | chr3_4:65563293-65563312 | Msa0514770:CDS | 50.0% |
AAACCGCAGGTCACCAAAAG+AGG | + | chr3_4:65563436-65563455 | Msa0514770:intron | 50.0% | |
AACCGCAGGTCACCAAAAGA+GGG | + | chr3_4:65563437-65563456 | Msa0514770:intron | 50.0% | |
!! | TTCCCTCTTTTGGTGACCTG+CGG | - | chr3_4:65563442-65563461 | None:intergenic | 50.0% |
!! | GTTGTGATCTTGGTGCTCGT+AGG | - | chr3_4:65563525-65563544 | None:intergenic | 50.0% |
AGGACCCCCGAGATTATTCT+TGG | + | chr3_4:65563569-65563588 | Msa0514770:CDS | 50.0% | |
CCCCCGAGATTATTCTTGGT+AGG | + | chr3_4:65563573-65563592 | Msa0514770:CDS | 50.0% | |
GCTGGAAGACCCAAAATTGG+CGG | + | chr3_4:65563749-65563768 | Msa0514770:intron | 50.0% | |
! | CCAAAATCGGCCGCCAATTT+TGG | - | chr3_4:65563762-65563781 | None:intergenic | 50.0% |
!! | CCAAAATTGGCGGCCGATTT+TGG | + | chr3_4:65563759-65563778 | Msa0514770:intron | 50.0% |
!! | TGGCGGCCGATTTTGGAAAT+CGG | + | chr3_4:65563766-65563785 | Msa0514770:intron | 50.0% |
TCCCAAAGGCAGCCAAAATC+GGG | - | chr3_4:65563794-65563813 | None:intergenic | 50.0% | |
CTCCCAAAGGCAGCCAAAAT+CGG | - | chr3_4:65563795-65563814 | None:intergenic | 50.0% | |
CAGAGCAATAAGCCTCCCAA+AGG | - | chr3_4:65563808-65563827 | None:intergenic | 50.0% | |
! | CTTTGGGAGGCTTATTGCTC+TGG | + | chr3_4:65563806-65563825 | Msa0514770:intron | 50.0% |
TTTCAGCCCCCTCTATCTCA+AGG | - | chr3_4:65563951-65563970 | None:intergenic | 50.0% | |
AGATAGAGGGGGCTGAAACA+AGG | + | chr3_4:65563953-65563972 | Msa0514770:intron | 50.0% | |
GATAGAGGGGGCTGAAACAA+GGG | + | chr3_4:65563954-65563973 | Msa0514770:intron | 50.0% | |
AGTCTCTTGGTTACGGGAAG+AGG | + | chr3_4:65564072-65564091 | Msa0514770:intron | 50.0% | |
CTAGTACCATGGGTTCGAAG+TGG | + | chr3_4:65564427-65564446 | Msa0514770:intron | 50.0% | |
GAAGGGTGAAGGTTCGTTAC+CGG | + | chr3_4:65564542-65564561 | Msa0514770:intron | 50.0% | |
! | AGTGCCATTGTCTTGTGCCT+CGG | + | chr3_4:65564612-65564631 | Msa0514770:intron | 50.0% |
ATTCCCGAGGCACAAGACAA+TGG | - | chr3_4:65564619-65564638 | None:intergenic | 50.0% | |
CTCTCGAAACTTCATTCCCG+AGG | - | chr3_4:65564632-65564651 | None:intergenic | 50.0% | |
!!! | TGAGGTGCGTTTTGAGGATG+TGG | + | chr3_4:65564836-65564855 | Msa0514770:intron | 50.0% |
!!! | GAGGTGCGTTTTGAGGATGT+GGG | + | chr3_4:65564837-65564856 | Msa0514770:intron | 50.0% |
!! | GATGGTGTGGTGTTGTTTGG+AGG | + | chr3_4:65564866-65564885 | Msa0514770:intron | 50.0% |
ACCTTGAGAGTGATGCCTAG+TGG | + | chr3_4:65564910-65564929 | Msa0514770:intron | 50.0% | |
TCCACTAGGCATCACTCTCA+AGG | - | chr3_4:65564914-65564933 | None:intergenic | 50.0% | |
TCATAATCAGCCTGGAGAGG+CGG | + | chr3_4:65564999-65565018 | Msa0514770:intron | 50.0% | |
TCATAATCAGCCTGGAGAGG+CGG | + | chr3_4:65564999-65565018 | Msa0514770:intron | 50.0% | |
CCTTGAAACTCCACCTCAAC+AGG | - | chr3_4:65565082-65565101 | None:intergenic | 50.0% | |
CCTGTTGAGGTGGAGTTTCA+AGG | + | chr3_4:65565079-65565098 | Msa0514770:intron | 50.0% | |
GTTGAGGTGGAGTTTCAAGG+TGG | + | chr3_4:65565082-65565101 | Msa0514770:intron | 50.0% | |
GAGATTGGAAGCTCGGCTTT+AGG | + | chr3_4:65565139-65565158 | Msa0514770:intron | 50.0% | |
!! | ATTGGAAGCTCGGCTTTAGG+TGG | + | chr3_4:65565142-65565161 | Msa0514770:intron | 50.0% |
TAGGTGGAGTTGAACACACC+GGG | + | chr3_4:65565158-65565177 | Msa0514770:intron | 50.0% | |
GTACGACTATGGAGGACCTT+GGG | + | chr3_4:65565185-65565204 | Msa0514770:intron | 50.0% | |
CCACTAGAGCATAACACCCA+AGG | - | chr3_4:65565204-65565223 | None:intergenic | 50.0% | |
! | CCTTGGGTGTTATGCTCTAG+TGG | + | chr3_4:65565201-65565220 | Msa0514770:intron | 50.0% |
!! | CATGAAGACGGAAGGCATTC+CGG | + | chr3_4:65565241-65565260 | Msa0514770:intron | 50.0% |
TCCAAGGGTGATTGGATGCA+AGG | + | chr3_4:65565308-65565327 | Msa0514770:intron | 50.0% | |
ACCTTGCATCCAATCACCCT+TGG | - | chr3_4:65565312-65565331 | None:intergenic | 50.0% | |
AGACATTCCGATCGCTGAAG+AGG | + | chr3_4:65565443-65565462 | Msa0514770:intron | 50.0% | |
TCCGATCGCTGAAGAGGTTA+AGG | + | chr3_4:65565449-65565468 | Msa0514770:intron | 50.0% | |
CACAAGGATCTTCAAAGGGG+CGG | + | chr3_4:65565515-65565534 | Msa0514770:intron | 50.0% | |
AGGCATTCCGATGGTTGAAG+AGG | + | chr3_4:65565539-65565558 | Msa0514770:intron | 50.0% | |
!! | TGTGGAGCTACTTGGTGTAG+TGG | + | chr3_4:65565576-65565595 | Msa0514770:intron | 50.0% |
!! | GTGGAGCTACTTGGTGTAGT+GGG | + | chr3_4:65565577-65565596 | Msa0514770:intron | 50.0% |
GAACAAGGGAAAGAGCAGCA+AGG | + | chr3_4:65565599-65565618 | Msa0514770:intron | 50.0% | |
AAGAGCAGCAAGGTGGTTGA+TGG | + | chr3_4:65565609-65565628 | Msa0514770:intron | 50.0% | |
!! | CAGCAAGGTGGTTGATGGTT+TGG | + | chr3_4:65565614-65565633 | Msa0514770:intron | 50.0% |
!!! | CAAAATCGGCCGCCGATTTT+GGG | - | chr3_4:65565730-65565749 | None:intergenic | 50.0% |
TCCCAAAGGCAGCCAAAATC+GGG | - | chr3_4:65563794-65563813 | None:intergenic | 50.0% | |
CTCCCAAAGGCAGCCAAAAT+CGG | - | chr3_4:65563795-65563814 | None:intergenic | 50.0% | |
TTTCAGCCCCCTCTATCTCA+AGG | - | chr3_4:65563951-65563970 | None:intergenic | 50.0% | |
AGATAGAGGGGGCTGAAACA+AGG | + | chr3_4:65563953-65563972 | Msa0514770:intron | 50.0% | |
GATAGAGGGGGCTGAAACAA+GGG | + | chr3_4:65563954-65563973 | Msa0514770:intron | 50.0% | |
AGTCTCTTGGTTACGGGAAG+AGG | + | chr3_4:65564072-65564091 | Msa0514770:intron | 50.0% | |
! | GCTGCGGTTTGGGTAGAATT+AGG | + | chr3_4:65566083-65566102 | Msa0514770:intron | 50.0% |
! | CGGTTTGGGTAGAATTAGGC+AGG | + | chr3_4:65566087-65566106 | Msa0514770:intron | 50.0% |
TCCCCCAGACTAGGTCAATT+TGG | + | chr3_4:65566185-65566204 | Msa0514770:intron | 50.0% | |
! | AGCATCTAGCCATGATGGAG+AGG | + | chr3_4:65566612-65566631 | Msa0514770:intron | 50.0% |
! | GCATCTAGCCATGATGGAGA+GGG | + | chr3_4:65566613-65566632 | Msa0514770:intron | 50.0% |
TCTCGAGAGACTGCTCCTTT+AGG | - | chr3_4:65566805-65566824 | None:intergenic | 50.0% | |
CATGCTGCATCACCAGATTC+TGG | - | chr3_4:65566940-65566959 | None:intergenic | 50.0% | |
! | GAATCTGGTGATGCAGCATG+TGG | + | chr3_4:65566940-65566959 | Msa0514770:intron | 50.0% |
GATGCAGCATGTGGATCACT+CGG | + | chr3_4:65566949-65566968 | Msa0514770:CDS | 50.0% | |
! | TTCGGTTTGATCCCATGAGC+AGG | + | chr3_4:65567005-65567024 | Msa0514770:CDS | 50.0% |
TGATCCCATGAGCAGGATGA+AGG | + | chr3_4:65567012-65567031 | Msa0514770:CDS | 50.0% | |
TGAGCCTTCATCCTGCTCAT+GGG | - | chr3_4:65567019-65567038 | None:intergenic | 50.0% | |
ATGAGCCTTCATCCTGCTCA+TGG | - | chr3_4:65567020-65567039 | None:intergenic | 50.0% | |
!! | TTACTGGGGAGCATTACCAG+AGG | + | chr3_4:65567062-65567081 | Msa0514770:CDS | 50.0% |
GGGCGATAACTGTTCTTCCG+GGG | - | chr3_4:65561910-65561929 | None:intergenic | 55.0% | |
ACGGAACGTTACCGGGATTG+CGG | + | chr3_4:65562232-65562251 | Msa0514770:intron | 55.0% | |
AGGTCCAAAAACGGTCACGG+TGG | - | chr3_4:65562288-65562307 | None:intergenic | 55.0% | |
AATCGCCGTTACGGCCGTTA+AGG | + | chr3_4:65562337-65562356 | Msa0514770:intron | 55.0% | |
GCGTTCCTTAACGGCCGTAA+CGG | - | chr3_4:65562345-65562364 | None:intergenic | 55.0% | |
ACGGTGTTTCGTGGCCGTAA+CGG | - | chr3_4:65562386-65562405 | None:intergenic | 55.0% | |
GAGTGCGTAACGGTGTTTCG+TGG | - | chr3_4:65562395-65562414 | None:intergenic | 55.0% | |
TCTTCCTCCTAACAGCAGCG+CGG | - | chr3_4:65562624-65562643 | None:intergenic | 55.0% | |
TGTCGCGGTTTCGGCTGTAA+CGG | - | chr3_4:65563038-65563057 | None:intergenic | 55.0% | |
TAATGGTCGCGGTCGCGTTA+AGG | - | chr3_4:65563062-65563081 | None:intergenic | 55.0% | |
ATCCCACCCCATGAGAGAGT+TGG | + | chr3_4:65563095-65563114 | Msa0514770:intron | 55.0% | |
GCTTCAAGTCGGTGTGGATG+AGG | - | chr3_4:65563222-65563241 | None:intergenic | 55.0% | |
!! | GGCGGCCGATTTTGGAAATC+GGG | + | chr3_4:65563767-65563786 | Msa0514770:intron | 55.0% |
!! | GCGGCCGATTTTGGAAATCG+GGG | + | chr3_4:65563768-65563787 | Msa0514770:intron | 55.0% |
CGGGCCCCGATTTCCAAAAT+CGG | - | chr3_4:65563775-65563794 | None:intergenic | 55.0% | |
! | TGGAAATCGGGGCCCGATTT+TGG | + | chr3_4:65563779-65563798 | Msa0514770:intron | 55.0% |
!!! | GCCCGATTTTGGCTGCCTTT+GGG | + | chr3_4:65563790-65563809 | Msa0514770:intron | 55.0% |
!!! | CGATTTTGGCTGCCTTTGGG+AGG | + | chr3_4:65563793-65563812 | Msa0514770:intron | 55.0% |
TACGGGAAGAGGCTGCGATT+TGG | + | chr3_4:65564083-65564102 | Msa0514770:intron | 55.0% | |
ACGGGAAGAGGCTGCGATTT+GGG | + | chr3_4:65564084-65564103 | Msa0514770:intron | 55.0% | |
ATCCTTTGACCCTTGCCCCA+CGG | - | chr3_4:65564404-65564423 | None:intergenic | 55.0% | |
!! | GAAGACCGAGATGGTGGACA+AGG | + | chr3_4:65564584-65564603 | Msa0514770:intron | 55.0% |
GCACAAGACAATGGCACTCC+TGG | - | chr3_4:65564610-65564629 | None:intergenic | 55.0% | |
! | GTGCCATTGTCTTGTGCCTC+GGG | + | chr3_4:65564613-65564632 | Msa0514770:intron | 55.0% |
!! | ATACAACCGCGGCATCGATG+TGG | + | chr3_4:65564664-65564683 | Msa0514770:intron | 55.0% |
!! | TACAACCGCGGCATCGATGT+GGG | + | chr3_4:65564665-65564684 | Msa0514770:intron | 55.0% |
!! | GGCATCGATGTGGGCAAAGT+TGG | + | chr3_4:65564674-65564693 | Msa0514770:intron | 55.0% |
TGAGGATGTGGGTGCTCTGA+TGG | + | chr3_4:65564848-65564867 | Msa0514770:intron | 55.0% | |
! | ATGTGGGTGCTCTGATGGTG+TGG | + | chr3_4:65564853-65564872 | Msa0514770:intron | 55.0% |
GAGAGTGATGCCTAGTGGAG+CGG | + | chr3_4:65564915-65564934 | Msa0514770:intron | 55.0% | |
CACTCAACATCAGCCTGGAG+AGG | + | chr3_4:65564961-65564980 | Msa0514770:intron | 55.0% | |
TCAACATCAGCCTGGAGAGG+CGG | + | chr3_4:65564964-65564983 | Msa0514770:intron | 55.0% | |
ATTCTTACCACCGCCTCTCC+AGG | - | chr3_4:65564977-65564996 | None:intergenic | 55.0% | |
ATTCTTACCACCGCCTCTCC+AGG | - | chr3_4:65564977-65564996 | None:intergenic | 55.0% | |
ATTCTTACCACCGCCTCTCC+AGG | - | chr3_4:65564977-65564996 | None:intergenic | 55.0% | |
CTCCATAGTCGTACCACTCC+CGG | - | chr3_4:65565179-65565198 | None:intergenic | 55.0% | |
GGTACGACTATGGAGGACCT+TGG | + | chr3_4:65565184-65565203 | Msa0514770:intron | 55.0% | |
AGGATCTTCAAAGGGGCGGA+AGG | + | chr3_4:65565519-65565538 | Msa0514770:intron | 55.0% | |
CAAGGGAAAGAGCAGCAAGG+TGG | + | chr3_4:65565602-65565621 | Msa0514770:intron | 55.0% | |
GCTGGAAGACCCAAAATCGG+CGG | + | chr3_4:65565718-65565737 | Msa0514770:intron | 55.0% | |
!!! | CCAAAATCGGCCGCCGATTT+TGG | - | chr3_4:65565731-65565750 | None:intergenic | 55.0% |
!! | CCAAAATCGGCGGCCGATTT+TGG | + | chr3_4:65565728-65565747 | Msa0514770:intron | 55.0% |
!! | CGGCGGCCGATTTTGGAAAT+CGG | + | chr3_4:65565735-65565754 | Msa0514770:intron | 55.0% |
!! | GGCGGCCGATTTTGGAAATC+GGG | + | chr3_4:65563767-65563786 | Msa0514770:intron | 55.0% |
!! | GCGGCCGATTTTGGAAATCG+GGG | + | chr3_4:65563768-65563787 | Msa0514770:intron | 55.0% |
CGGGCCCCGATTTCCAAAAT+CGG | - | chr3_4:65563775-65563794 | None:intergenic | 55.0% | |
! | TGGAAATCGGGGCCCGATTT+TGG | + | chr3_4:65563779-65563798 | Msa0514770:intron | 55.0% |
!!! | GCCCGATTTTGGCTGCCTTT+GGG | + | chr3_4:65563790-65563809 | Msa0514770:intron | 55.0% |
!!! | CGATTTTGGCTGCCTTTGGG+AGG | + | chr3_4:65563793-65563812 | Msa0514770:intron | 55.0% |
TTGGTTACGGGAAGAGGCTG+CGG | + | chr3_4:65564078-65564097 | Msa0514770:intron | 55.0% | |
! | GCCATGATGGAGAGGGTTCT+AGG | + | chr3_4:65566620-65566639 | Msa0514770:intron | 55.0% |
GCCTAGAACCCTCTCCATCA+TGG | - | chr3_4:65566624-65566643 | None:intergenic | 55.0% | |
TCAGAAGGGGTAGGCTGAAC+TGG | + | chr3_4:65566779-65566798 | Msa0514770:CDS | 55.0% | |
! | GGTAGGCTGAACTGGCCTAA+AGG | + | chr3_4:65566787-65566806 | Msa0514770:CDS | 55.0% |
CAGCATGTGGATCACTCGGT+CGG | + | chr3_4:65566953-65566972 | Msa0514770:CDS | 55.0% | |
AGCATGTGGATCACTCGGTC+GGG | + | chr3_4:65566954-65566973 | Msa0514770:CDS | 55.0% | |
GAGATGGTTGGACCAAGCCC+CGG | + | chr3_4:65561890-65561909 | Msa0514770:intron | 60.0% | |
GGCCGACGGCCGTTACAAAT+CGG | + | chr3_4:65562253-65562272 | Msa0514770:intron | 60.0% | |
! | GCAGCCACCGTGACCGTTTT+TGG | + | chr3_4:65562281-65562300 | Msa0514770:intron | 60.0% |
ACGGGCGCAAAACGCCGTTA+CGG | + | chr3_4:65562369-65562388 | Msa0514770:intron | 60.0% | |
CGGTCGCGTTAAGGTTGTCG+CGG | - | chr3_4:65563053-65563072 | None:intergenic | 60.0% | |
CTCTCATGGGGTGGGATGCA+AGG | - | chr3_4:65563092-65563111 | None:intergenic | 60.0% | |
!!! | GGCCCGATTTTGGCTGCCTT+TGG | + | chr3_4:65563789-65563808 | Msa0514770:intron | 60.0% |
GCTGCTCTCTCCCCCATACT+AGG | + | chr3_4:65564187-65564206 | Msa0514770:intron | 60.0% | |
CAACAATTGGCGCCCACCGT+GGG | + | chr3_4:65564385-65564404 | Msa0514770:intron | 60.0% | |
AACAATTGGCGCCCACCGTG+GGG | + | chr3_4:65564386-65564405 | Msa0514770:intron | 60.0% | |
TTTGACCCTTGCCCCACGGT+GGG | - | chr3_4:65564400-65564419 | None:intergenic | 60.0% | |
ACCGGTCACCATGTCACGAG+CGG | + | chr3_4:65564560-65564579 | Msa0514770:intron | 60.0% | |
TCCGCTCGTGACATGGTGAC+CGG | - | chr3_4:65564564-65564583 | None:intergenic | 60.0% | |
GGTCTTCTCCGCTCGTGACA+TGG | - | chr3_4:65564571-65564590 | None:intergenic | 60.0% | |
ACGAGCGGAGAAGACCGAGA+TGG | + | chr3_4:65564575-65564594 | Msa0514770:intron | 60.0% | |
AGCGGAGAAGACCGAGATGG+TGG | + | chr3_4:65564578-65564597 | Msa0514770:intron | 60.0% | |
!! | CCTGGCCTTGTCCACCATCT+CGG | - | chr3_4:65564592-65564611 | None:intergenic | 60.0% |
CTTTGCCCACATCGATGCCG+CGG | - | chr3_4:65564673-65564692 | None:intergenic | 60.0% | |
GGTGGAGCCAATGGCCATCA+TGG | + | chr3_4:65564767-65564786 | Msa0514770:intron | 60.0% | |
AGTGATGCCTAGTGGAGCGG+TGG | + | chr3_4:65564918-65564937 | Msa0514770:intron | 60.0% | |
TAATCAGCCTGGAGAGGCGG+TGG | + | chr3_4:65565002-65565021 | Msa0514770:intron | 60.0% | |
TAATCAGCCTGGAGAGGCGG+TGG | + | chr3_4:65565002-65565021 | Msa0514770:intron | 60.0% | |
GGAGTTGAACACACCGGGAG+TGG | + | chr3_4:65565163-65565182 | Msa0514770:intron | 60.0% | |
CACCGGGAGTGGTACGACTA+TGG | + | chr3_4:65565174-65565193 | Msa0514770:intron | 60.0% | |
CGGGAGTGGTACGACTATGG+AGG | + | chr3_4:65565177-65565196 | Msa0514770:intron | 60.0% | |
!! | GAAGACGGAAGGCATTCCGG+AGG | + | chr3_4:65565244-65565263 | Msa0514770:intron | 60.0% |
!!! | GGCCCGATTTTGGCTGCCTT+TGG | + | chr3_4:65563789-65563808 | Msa0514770:intron | 60.0% |
TACGGGAAGAGGCTGCGGTT+TGG | + | chr3_4:65566072-65566091 | Msa0514770:intron | 60.0% | |
ACGGGAAGAGGCTGCGGTTT+GGG | + | chr3_4:65566073-65566092 | Msa0514770:intron | 60.0% | |
GCATGTGGATCACTCGGTCG+GGG | + | chr3_4:65566955-65566974 | Msa0514770:CDS | 60.0% | |
GTTACCGGGATTGCGGCCGA+CGG | + | chr3_4:65562239-65562258 | Msa0514770:intron | 65.0% | |
AGAGGAGCCGCGCTGCTGTT+AGG | + | chr3_4:65562614-65562633 | Msa0514770:intron | 65.0% | |
GCAACAATTGGCGCCCACCG+TGG | + | chr3_4:65564384-65564403 | Msa0514770:intron | 65.0% | |
CTTTGACCCTTGCCCCACGG+TGG | - | chr3_4:65564401-65564420 | None:intergenic | 65.0% | |
CACCGTGGGGCAAGGGTCAA+AGG | + | chr3_4:65564399-65564418 | Msa0514770:intron | 65.0% | |
!! | CCGAGATGGTGGACAAGGCC+AGG | + | chr3_4:65564589-65564608 | Msa0514770:intron | 65.0% |
CAGACGACCACCGCTCCACT+AGG | - | chr3_4:65564928-65564947 | None:intergenic | 65.0% | |
CTAGTGGAGCGGTGGTCGTC+TGG | + | chr3_4:65564926-65564945 | Msa0514770:intron | 65.0% | |
ACATCAGCCTGGAGAGGCGG+TGG | + | chr3_4:65564967-65564986 | Msa0514770:intron | 65.0% | |
!! | AGGGGCGGAAGGCATTCCGA+TGG | + | chr3_4:65565530-65565549 | Msa0514770:intron | 65.0% |
GCTGCTCTCTCCCCCAGACT+AGG | + | chr3_4:65566176-65566195 | Msa0514770:intron | 65.0% | |
GGAGCCGCGCTGCTGTTAGG+AGG | + | chr3_4:65562617-65562636 | Msa0514770:intron | 70.0% | |
ACGGCCGTCGGCCGCAATCC+CGG | - | chr3_4:65562246-65562265 | None:intergenic | 75.0% | |
TTGGCGCCCACCGTGGGGCA+AGG | + | chr3_4:65564391-65564410 | Msa0514770:intron | 75.0% | |
TGGCGCCCACCGTGGGGCAA+GGG | + | chr3_4:65564392-65564411 | Msa0514770:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 65560792 | 65567090 | 65560792 | ID=Msa0514770;Name=Msa0514770 |
chr3_4 | mRNA | 65560792 | 65567090 | 65560792 | ID=Msa0514770-mRNA-1;Parent=Msa0514770;Name=Msa0514770-mRNA-1;_AED=0.23;_eAED=0.24;_QI=0|0|0|0.87|0.14|0.25|8|0|289 |
chr3_4 | exon | 65560792 | 65560795 | 65560792 | ID=Msa0514770-mRNA-1:exon:16728;Parent=Msa0514770-mRNA-1 |
chr3_4 | exon | 65561086 | 65561287 | 65561086 | ID=Msa0514770-mRNA-1:exon:16729;Parent=Msa0514770-mRNA-1 |
chr3_4 | exon | 65561736 | 65561791 | 65561736 | ID=Msa0514770-mRNA-1:exon:16730;Parent=Msa0514770-mRNA-1 |
chr3_4 | exon | 65561893 | 65561985 | 65561893 | ID=Msa0514770-mRNA-1:exon:16731;Parent=Msa0514770-mRNA-1 |
chr3_4 | exon | 65563203 | 65563314 | 65563203 | ID=Msa0514770-mRNA-1:exon:16732;Parent=Msa0514770-mRNA-1 |
chr3_4 | exon | 65563445 | 65563594 | 65563445 | ID=Msa0514770-mRNA-1:exon:16733;Parent=Msa0514770-mRNA-1 |
chr3_4 | exon | 65566759 | 65566861 | 65566759 | ID=Msa0514770-mRNA-1:exon:16734;Parent=Msa0514770-mRNA-1 |
chr3_4 | exon | 65566941 | 65567090 | 65566941 | ID=Msa0514770-mRNA-1:exon:16735;Parent=Msa0514770-mRNA-1 |
chr3_4 | CDS | 65560792 | 65560795 | 65560792 | ID=Msa0514770-mRNA-1:cds;Parent=Msa0514770-mRNA-1 |
chr3_4 | CDS | 65561086 | 65561287 | 65561086 | ID=Msa0514770-mRNA-1:cds;Parent=Msa0514770-mRNA-1 |
chr3_4 | CDS | 65561736 | 65561791 | 65561736 | ID=Msa0514770-mRNA-1:cds;Parent=Msa0514770-mRNA-1 |
chr3_4 | CDS | 65561893 | 65561985 | 65561893 | ID=Msa0514770-mRNA-1:cds;Parent=Msa0514770-mRNA-1 |
chr3_4 | CDS | 65563203 | 65563314 | 65563203 | ID=Msa0514770-mRNA-1:cds;Parent=Msa0514770-mRNA-1 |
chr3_4 | CDS | 65563445 | 65563594 | 65563445 | ID=Msa0514770-mRNA-1:cds;Parent=Msa0514770-mRNA-1 |
chr3_4 | CDS | 65566759 | 65566861 | 65566759 | ID=Msa0514770-mRNA-1:cds;Parent=Msa0514770-mRNA-1 |
chr3_4 | CDS | 65566941 | 65567090 | 65566941 | ID=Msa0514770-mRNA-1:cds;Parent=Msa0514770-mRNA-1 |
Gene Sequence |
Protein sequence |