AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0515660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515660 MtrunA17_Chr3g0125321 99.605 253 1 0 1 253 1 253 0.0 523
Msa0515660 MtrunA17_Chr3g0114411 27.184 206 141 4 35 236 58 258 3.15e-15 73.6
Msa0515660 MtrunA17_Chr3g0124921 28.571 175 118 3 70 241 151 321 2.12e-13 68.9
Msa0515660 MtrunA17_Chr7g0259851 25.828 151 108 1 77 227 523 669 2.18e-13 69.3
Msa0515660 MtrunA17_Chr7g0259501 27.568 185 113 5 74 243 201 379 2.77e-13 68.9
Msa0515660 MtrunA17_Chr1g0185861 27.568 185 113 5 74 243 205 383 6.50e-13 67.8
Msa0515660 MtrunA17_Chr5g0401281 29.605 152 100 3 95 241 79 228 7.50e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515660 AT4G08455.1 65.234 256 79 3 4 249 6 261 4.07e-118 338
Msa0515660 AT3G56230.1 29.592 196 127 5 49 241 86 273 1.23e-19 86.3
Msa0515660 AT1G01640.2 31.902 163 108 2 80 241 3 163 3.01e-19 83.2
Msa0515660 AT1G01640.1 31.902 163 108 2 80 241 24 184 5.68e-19 82.8
Msa0515660 AT4G37610.1 28.634 227 147 6 30 246 5 226 1.94e-14 72.4
Msa0515660 AT3G06190.1 27.717 184 114 4 74 243 196 374 3.05e-13 68.9
Msa0515660 AT1G21780.2 26.455 189 129 4 58 242 139 321 7.94e-12 64.7
Msa0515660 AT1G21780.1 26.455 189 129 4 58 242 139 321 7.94e-12 64.7
Msa0515660 AT3G06190.5 28.485 165 101 3 74 226 196 355 2.04e-11 63.5
Msa0515660 AT5G19330.1 25.153 163 115 2 78 240 539 694 3.82e-11 63.2
Msa0515660 AT2G39760.1 27.922 154 97 2 97 236 207 360 6.67e-11 62.0
Msa0515660 AT2G05330.1 29.487 156 104 2 101 250 34 189 8.91e-11 60.5
Msa0515660 AT2G40450.1 29.213 178 118 3 83 252 26 203 9.55e-11 60.1
Msa0515660 AT3G43700.1 24.457 184 116 4 74 239 199 377 9.62e-11 61.6

Find 112 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTGTGTTGCTTTGGTTGC+TGG 0.177348 3_4:+66977542 Msa0515660:three_prime_UTR
GTGACAACATTGCTGCTTTC+CGG 0.214238 3_4:+66977604 Msa0515660:three_prime_UTR
ATATCACAGCACTTTGATTC+TGG 0.253784 3_4:+66977383 Msa0515660:three_prime_UTR
TCCTAAAACTAATAGGTTAC+AGG 0.263882 3_4:-66976879 None:intergenic
GGGTTATAGGAATGCGGTTT+AGG 0.297273 3_4:+66977172 Msa0515660:exon
TTGCAAGTACCGGCGTCGTC+GGG 0.297670 3_4:-66976093 None:intergenic
ATTTGATCTCCAAACTGAAT+TGG 0.305803 3_4:+66976945 Msa0515660:CDS
TGCAGCCACGCTAGGGTTAT+AGG 0.318170 3_4:+66977159 Msa0515660:CDS
TCAAGCATGGCTCTGAAAAC+TGG 0.323355 3_4:-66976737 None:intergenic
GGCAGTGATCATGGAGAATA+TGG 0.334507 3_4:+66977036 Msa0515660:CDS
CGATGATTGATGATGGATAT+TGG 0.341553 3_4:-66975948 None:intergenic
GCATGGTAGAAACTTAAGTT+TGG 0.349216 3_4:+66977217 Msa0515660:three_prime_UTR
TGTAGATGTGATCAGATAAT+AGG 0.349255 3_4:+66977478 Msa0515660:three_prime_UTR
CTAATAGGTTACAGGCCATT+TGG 0.355315 3_4:-66976871 None:intergenic
CCAATTGCAAGATGCTGCTT+TGG 0.359172 3_4:+66977015 Msa0515660:CDS
AGCTTTCTCCCAATTCAGTT+TGG 0.363821 3_4:-66976954 None:intergenic
CTAGAGCAGTTGCCTCTCTA+AGG 0.364167 3_4:+66977327 Msa0515660:three_prime_UTR
CTTCAAAGGCTGTGTTGCTT+TGG 0.367507 3_4:+66977535 Msa0515660:three_prime_UTR
TGAAGCTTATCTTGCCAAAC+AGG 0.369315 3_4:+66977129 Msa0515660:CDS
GTTGAAACAAGATATTAAAA+TGG 0.377055 3_4:-66977788 None:intergenic
CTGACGTTTGAATTCCTCTT+CGG 0.381082 3_4:-66976142 None:intergenic
GTAGTAGTAACAGCAGTATA+TGG 0.382806 3_4:-66977290 None:intergenic
AGACTTTGGATTTGAGGTCT+TGG 0.386775 3_4:-66976167 None:intergenic
GGAAGGAGACTTTGGATTTG+AGG 0.393809 3_4:-66976173 None:intergenic
CCAAAGCAGCATCTTGCAAT+TGG 0.397391 3_4:-66977015 None:intergenic
CATAGGTGGAAACACGAAAC+AGG 0.397964 3_4:-66977699 None:intergenic
CTAGATTTGTTGAGATGTGC+AGG 0.399735 3_4:+66977737 Msa0515660:three_prime_UTR
GGCTGCAGTATTAACCTGTT+TGG 0.400932 3_4:-66977143 None:intergenic
TTTGATCTCCAAACTGAATT+GGG 0.405372 3_4:+66976946 Msa0515660:CDS
TACAGGCCATTTGGTTATCC+AGG 0.408291 3_4:-66976862 None:intergenic
GAGAGTGAGGAAGGAGACTT+TGG 0.418723 3_4:-66976181 None:intergenic
AACGGCCTTGTGAGCGGGAA+TGG 0.421444 3_4:-66976274 None:intergenic
AGCCATGCTTGAGAATGATA+TGG 0.435569 3_4:+66976748 Msa0515660:CDS
TTGCCACCGTCGCGAGTCAC+TGG 0.438948 3_4:+66977571 Msa0515660:three_prime_UTR
ACGACGCAGCAGTGAGGATG+TGG 0.444828 3_4:-66977666 None:intergenic
TGATACATCAGCAATCTTGA+TGG 0.449372 3_4:-66976789 None:intergenic
TGCTGCTTTGGCAGTGATCA+TGG 0.451583 3_4:+66977027 Msa0515660:CDS
TGATGGATATTGGATGGAAA+AGG 0.462631 3_4:-66975938 None:intergenic
GTACACTGCTGAAGCATGCC+TGG 0.466139 3_4:+66976844 Msa0515660:CDS
GTATCAGGTGAAGCATCTTA+AGG 0.470378 3_4:+66976907 Msa0515660:CDS
GTTAATACTGCAGCCACGCT+AGG 0.472280 3_4:+66977151 Msa0515660:CDS
GAATTCCTCTTCGGTTTCGT+TGG 0.472827 3_4:-66976133 None:intergenic
TTCTGTCTTTCGGCGTCACA+CGG 0.483820 3_4:-66975912 None:intergenic
TTTGCAAGTACCGGCGTCGT+CGG 0.487205 3_4:-66976094 None:intergenic
AACTAATCCTCGTTTAGTTG+TGG 0.493649 3_4:+66977099 Msa0515660:CDS
AGCAGCATCTTGCAATTGGT+TGG 0.503680 3_4:-66977011 None:intergenic
TCCTTCCATTCCCGCTCACA+AGG 0.504228 3_4:+66976269 Msa0515660:CDS
CTCCATATCATTCTCAAGCA+TGG 0.507732 3_4:-66976750 None:intergenic
ATCGATGCGATGATTGATGA+TGG 0.509532 3_4:-66975955 None:intergenic
AGGAGAAGCGAGAGTGAGGA+AGG 0.513816 3_4:-66976190 None:intergenic
ACGAGAACGGCCTTGTGAGC+GGG 0.514027 3_4:-66976279 None:intergenic
AGAGACAATCAGAGAAGCAT+AGG 0.516781 3_4:-66977716 None:intergenic
GTCGTCGTCGTAATCGCTCT+CGG 0.517038 3_4:-66976022 None:intergenic
GATGGATATTGGATGGAAAA+GGG 0.519978 3_4:-66975937 None:intergenic
AGTTTGGATTATATTCTTAG+TGG 0.521806 3_4:+66977233 Msa0515660:three_prime_UTR
TGAAGATTACACGGAGTTGG+TGG 0.522112 3_4:+66977075 Msa0515660:CDS
GTAGCATTCTTTGCAAGTAC+CGG 0.522996 3_4:-66976103 None:intergenic
GCCTTGTGAGCGGGAATGGA+AGG 0.523187 3_4:-66976270 None:intergenic
CCCTTGTTATTGAATTCAGA+CGG 0.525616 3_4:+66977810 Msa0515660:three_prime_UTR
AAATGAAGATTACACGGAGT+TGG 0.527013 3_4:+66977072 Msa0515660:CDS
ATTCCATCACTGTACTTCAA+AGG 0.527511 3_4:+66977521 Msa0515660:three_prime_UTR
AAGGAGAACAAGATCGGTGG+TGG 0.529952 3_4:-66976226 None:intergenic
GTTTGGATTATATTCTTAGT+GGG 0.531016 3_4:+66977234 Msa0515660:three_prime_UTR
GACAATCAGAGAAGCATAGG+TGG 0.533675 3_4:-66977713 None:intergenic
GATCTTGTTCTCCTTCCGTC+CGG 0.554395 3_4:+66976234 Msa0515660:CDS
AGCATGCCTGGATAACCAAA+TGG 0.557144 3_4:+66976856 Msa0515660:CDS
GACGCAGCAGTGAGGATGTG+GGG 0.558116 3_4:-66977664 None:intergenic
CGAAGCCAACGAAACCGAAG+AGG 0.562358 3_4:+66976128 Msa0515660:CDS
TACACTGTGCAACGGTGCCG+TGG 0.563730 3_4:-66975997 None:intergenic
AGAAAGTATCACCGGACGGA+AGG 0.567541 3_4:-66976245 None:intergenic
TTAATACTGCAGCCACGCTA+GGG 0.570249 3_4:+66977152 Msa0515660:CDS
AGAATGATATGGAGGAAAGC+CGG 0.570838 3_4:+66976759 Msa0515660:CDS
ATTGTAGTCAACTTTAAGCA+TGG 0.573029 3_4:+66977200 Msa0515660:three_prime_UTR
CAAACACATGGTGCTGCCAC+CGG 0.573154 3_4:-66977623 None:intergenic
CAAGAGGAGAAGCGAGAGTG+AGG 0.574599 3_4:-66976194 None:intergenic
GATTGATGATGGATATTGGA+TGG 0.581970 3_4:-66975944 None:intergenic
TGCAAGTACCGGCGTCGTCG+GGG 0.582135 3_4:-66976092 None:intergenic
GGCATTGTGTTGATGTGCAA+AGG 0.583175 3_4:-66976990 None:intergenic
TCCGTCTGAATTCAATAACA+AGG 0.583708 3_4:-66977811 None:intergenic
CGACGCAGCAGTGAGGATGT+GGG 0.589210 3_4:-66977665 None:intergenic
CAATCTTGATGGTGCCACTC+CGG 0.589211 3_4:-66976778 None:intergenic
CTCGCAAGAGAGACATCTCA+TGG 0.590091 3_4:-66976058 None:intergenic
AGAACAAGATCGGTGGTGGA+AGG 0.595036 3_4:-66976222 None:intergenic
GGAAGGAGAGAAAGTATCAC+CGG 0.597919 3_4:-66976253 None:intergenic
GTTGCCTCTCTAAGGCATTG+TGG 0.598364 3_4:+66977335 Msa0515660:three_prime_UTR
CAGCCTTTGAAGTACAGTGA+TGG 0.610775 3_4:-66977524 None:intergenic
GACGAGAACGGCCTTGTGAG+CGG 0.616158 3_4:-66976280 None:intergenic
CTTAGTGGGTGATTACTCTG+TGG 0.617518 3_4:+66977248 Msa0515660:three_prime_UTR
ACAACATTGCTGCTTTCCGG+TGG 0.622831 3_4:+66977607 Msa0515660:three_prime_UTR
GATTACGACCCCGACGACGC+CGG 0.624267 3_4:+66976084 Msa0515660:CDS
GGACGGAAGGAGAACAAGAT+CGG 0.626611 3_4:-66976232 None:intergenic
CATGAGATGTCTCTCTTGCG+AGG 0.633418 3_4:+66976059 Msa0515660:CDS
ATAGGTGGAAACACGAAACA+GGG 0.640177 3_4:-66977698 None:intergenic
AGGGAGGGTACTGACGAGAA+CGG 0.641189 3_4:-66976292 None:intergenic
ACGCAGCAGTGAGGATGTGG+GGG 0.645645 3_4:-66977663 None:intergenic
CATGCTTGAGAATGATATGG+AGG 0.646700 3_4:+66976751 Msa0515660:CDS
CCGTCTGAATTCAATAACAA+GGG 0.649404 3_4:-66977810 None:intergenic
GAACCAGTGACTCGCGACGG+TGG 0.657483 3_4:-66977574 None:intergenic
TAATCCACAATGCCTTAGAG+AGG 0.657957 3_4:-66977339 None:intergenic
ACGCTAGGGTTATAGGAATG+CGG 0.661484 3_4:+66977166 Msa0515660:exon
GGAGAGAAAGTATCACCGGA+CGG 0.661533 3_4:-66976249 None:intergenic
GTGGTGGAAGGAGCATCAAG+AGG 0.662081 3_4:-66976210 None:intergenic
ATTGAACCAGTGACTCGCGA+CGG 0.672868 3_4:-66977577 None:intergenic
TATATTTCCACAACTAAACG+AGG 0.674137 3_4:-66977106 None:intergenic
TCTCGGAGTACACTGTGCAA+CGG 0.678301 3_4:-66976005 None:intergenic
AACAATCAGATAGAATGCCA+CGG 0.686225 3_4:+66975980 Msa0515660:exon
GATATGGAGGAAAGCCGGAG+TGG 0.686483 3_4:+66976764 Msa0515660:CDS
CGGAAGGAGAACAAGATCGG+TGG 0.688815 3_4:-66976229 None:intergenic
ATTAGAACACAGAAATCACA+AGG 0.707643 3_4:-66977362 None:intergenic
AAAATAGTGACACAAACACA+TGG 0.718502 3_4:-66977635 None:intergenic
GACATCACGACGCAGCAGTG+AGG 0.720527 3_4:-66977672 None:intergenic
GCATTCCTATAACCCTAGCG+TGG 0.731788 3_4:-66977164 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAAAAAAGTATGAACAT+TGG + chr3_4:66977411-66977430 Msa0515660:three_prime_UTR 15.0%
!!! ATAAAAAAAAGTATGAACAT+TGG + chr3_4:66977411-66977430 Msa0515660:three_prime_UTR 15.0%
!! TTAAAGTAATAATAACCATG+TGG + chr3_4:66976388-66976407 Msa0515660:intron 20.0%
!! ACTTTAAATTAAATCATCAG+TGG - chr3_4:66976618-66976637 None:intergenic 20.0%
!! GTTGAAACAAGATATTAAAA+TGG - chr3_4:66977791-66977810 None:intergenic 20.0%
!! TTAAAGTAATAATAACCATG+TGG + chr3_4:66976388-66976407 Msa0515660:intron 20.0%
!! ACTTTAAATTAAATCATCAG+TGG - chr3_4:66976618-66976637 None:intergenic 20.0%
!! GTTGAAACAAGATATTAAAA+TGG - chr3_4:66977791-66977810 None:intergenic 20.0%
! TTGAAGTGGTTAATGAATTT+CGG + chr3_4:66976416-66976435 Msa0515660:intron 25.0%
! GATAAGCAATACATTATAGA+AGG - chr3_4:66976535-66976554 None:intergenic 25.0%
!!! GCTTTAAAATCATTGAGTAA+GGG - chr3_4:66976651-66976670 None:intergenic 25.0%
!!! AGCTTTAAAATCATTGAGTA+AGG - chr3_4:66976652-66976671 None:intergenic 25.0%
!! ACTTTTCTCCTAAAACTAAT+AGG - chr3_4:66976889-66976908 None:intergenic 25.0%
!!! TGTAATCTTCATTTTTAGTG+AGG - chr3_4:66977066-66977085 None:intergenic 25.0%
! CACTAAAAATGAAGATTACA+CGG + chr3_4:66977066-66977085 Msa0515660:CDS 25.0%
! AGTTTGGATTATATTCTTAG+TGG + chr3_4:66977233-66977252 Msa0515660:three_prime_UTR 25.0%
! GTTTGGATTATATTCTTAGT+GGG + chr3_4:66977234-66977253 Msa0515660:three_prime_UTR 25.0%
!! AAAGTATACACCTGTTTTAT+AGG + chr3_4:66977439-66977458 Msa0515660:three_prime_UTR 25.0%
!! AAGTATACACCTGTTTTATA+GGG + chr3_4:66977440-66977459 Msa0515660:three_prime_UTR 25.0%
!!! CATACACTTTTTCCATTTTA+TGG - chr3_4:66975874-66975893 None:intergenic 25.0%
! TTGAAGTGGTTAATGAATTT+CGG + chr3_4:66976416-66976435 Msa0515660:intron 25.0%
! GATAAGCAATACATTATAGA+AGG - chr3_4:66976535-66976554 None:intergenic 25.0%
!!! GCTTTAAAATCATTGAGTAA+GGG - chr3_4:66976651-66976670 None:intergenic 25.0%
!!! AGCTTTAAAATCATTGAGTA+AGG - chr3_4:66976652-66976671 None:intergenic 25.0%
!! ACTTTTCTCCTAAAACTAAT+AGG - chr3_4:66976889-66976908 None:intergenic 25.0%
!!! TGTAATCTTCATTTTTAGTG+AGG - chr3_4:66977066-66977085 None:intergenic 25.0%
! CACTAAAAATGAAGATTACA+CGG + chr3_4:66977066-66977085 Msa0515660:CDS 25.0%
! AGTTTGGATTATATTCTTAG+TGG + chr3_4:66977233-66977252 Msa0515660:three_prime_UTR 25.0%
! GTTTGGATTATATTCTTAGT+GGG + chr3_4:66977234-66977253 Msa0515660:three_prime_UTR 25.0%
!! AAAGTATACACCTGTTTTAT+AGG + chr3_4:66977439-66977458 Msa0515660:three_prime_UTR 25.0%
!! AAGTATACACCTGTTTTATA+GGG + chr3_4:66977440-66977459 Msa0515660:three_prime_UTR 25.0%
AAAAAAAGTGAAGAGAGAGA+GGG - chr3_4:66976314-66976333 None:intergenic 30.0%
AAAAAAAAGTGAAGAGAGAG+AGG - chr3_4:66976315-66976334 None:intergenic 30.0%
GTAATAATAACCATGTGGTT+AGG + chr3_4:66976393-66976412 Msa0515660:intron 30.0%
TGAATTTCGGTTAAGAGTTA+AGG + chr3_4:66976429-66976448 Msa0515660:intron 30.0%
TATCTTGTCCACAATCAAAA+TGG + chr3_4:66976551-66976570 Msa0515660:intron 30.0%
ATCTTGTCCACAATCAAAAT+GGG + chr3_4:66976552-66976571 Msa0515660:intron 30.0%
!!! TTATACTCCCATTTTGATTG+TGG - chr3_4:66976562-66976581 None:intergenic 30.0%
TCCTAAAACTAATAGGTTAC+AGG - chr3_4:66976882-66976901 None:intergenic 30.0%
!!! AGTTTTAGGAGAAAAGTATC+AGG + chr3_4:66976892-66976911 Msa0515660:CDS 30.0%
ATTTGATCTCCAAACTGAAT+TGG + chr3_4:66976945-66976964 Msa0515660:CDS 30.0%
TTTGATCTCCAAACTGAATT+GGG + chr3_4:66976946-66976965 Msa0515660:CDS 30.0%
TATATTTCCACAACTAAACG+AGG - chr3_4:66977109-66977128 None:intergenic 30.0%
ATTGTAGTCAACTTTAAGCA+TGG + chr3_4:66977200-66977219 Msa0515660:three_prime_UTR 30.0%
ATTAGAACACAGAAATCACA+AGG - chr3_4:66977365-66977384 None:intergenic 30.0%
! TTTTATCGTCCCTATAAAAC+AGG - chr3_4:66977452-66977471 None:intergenic 30.0%
TGTAGATGTGATCAGATAAT+AGG + chr3_4:66977478-66977497 Msa0515660:three_prime_UTR 30.0%
AAAATAGTGACACAAACACA+TGG - chr3_4:66977638-66977657 None:intergenic 30.0%
!! TAAGGTTTTATGTTCACTGT+CGG + chr3_4:66977763-66977782 Msa0515660:three_prime_UTR 30.0%
AAAAAAAGTGAAGAGAGAGA+GGG - chr3_4:66976314-66976333 None:intergenic 30.0%
AAAAAAAAGTGAAGAGAGAG+AGG - chr3_4:66976315-66976334 None:intergenic 30.0%
GTAATAATAACCATGTGGTT+AGG + chr3_4:66976393-66976412 Msa0515660:intron 30.0%
TGAATTTCGGTTAAGAGTTA+AGG + chr3_4:66976429-66976448 Msa0515660:intron 30.0%
TATCTTGTCCACAATCAAAA+TGG + chr3_4:66976551-66976570 Msa0515660:intron 30.0%
ATCTTGTCCACAATCAAAAT+GGG + chr3_4:66976552-66976571 Msa0515660:intron 30.0%
!!! TTATACTCCCATTTTGATTG+TGG - chr3_4:66976562-66976581 None:intergenic 30.0%
TCCTAAAACTAATAGGTTAC+AGG - chr3_4:66976882-66976901 None:intergenic 30.0%
!!! AGTTTTAGGAGAAAAGTATC+AGG + chr3_4:66976892-66976911 Msa0515660:CDS 30.0%
ATTTGATCTCCAAACTGAAT+TGG + chr3_4:66976945-66976964 Msa0515660:CDS 30.0%
TTTGATCTCCAAACTGAATT+GGG + chr3_4:66976946-66976965 Msa0515660:CDS 30.0%
TATATTTCCACAACTAAACG+AGG - chr3_4:66977109-66977128 None:intergenic 30.0%
ATTGTAGTCAACTTTAAGCA+TGG + chr3_4:66977200-66977219 Msa0515660:three_prime_UTR 30.0%
ATTAGAACACAGAAATCACA+AGG - chr3_4:66977365-66977384 None:intergenic 30.0%
! TTTTATCGTCCCTATAAAAC+AGG - chr3_4:66977452-66977471 None:intergenic 30.0%
TGTAGATGTGATCAGATAAT+AGG + chr3_4:66977478-66977497 Msa0515660:three_prime_UTR 30.0%
AAAATAGTGACACAAACACA+TGG - chr3_4:66977638-66977657 None:intergenic 30.0%
!! TAAGGTTTTATGTTCACTGT+CGG + chr3_4:66977763-66977782 Msa0515660:three_prime_UTR 30.0%
! GAAAAGGGTTTTCTGTCTTT+CGG - chr3_4:66975925-66975944 None:intergenic 35.0%
GATGGATATTGGATGGAAAA+GGG - chr3_4:66975940-66975959 None:intergenic 35.0%
! TGATGGATATTGGATGGAAA+AGG - chr3_4:66975941-66975960 None:intergenic 35.0%
!! GATTGATGATGGATATTGGA+TGG - chr3_4:66975947-66975966 None:intergenic 35.0%
!! CGATGATTGATGATGGATAT+TGG - chr3_4:66975951-66975970 None:intergenic 35.0%
AACAATCAGATAGAATGCCA+CGG + chr3_4:66975980-66975999 Msa0515660:exon 35.0%
! CATATTCAAGTTCCTAGCAT+GGG - chr3_4:66976474-66976493 None:intergenic 35.0%
! ACATATTCAAGTTCCTAGCA+TGG - chr3_4:66976475-66976494 None:intergenic 35.0%
! GGGAGTATAATGCTGTATAA+TGG + chr3_4:66976572-66976591 Msa0515660:intron 35.0%
TGATACATCAGCAATCTTGA+TGG - chr3_4:66976792-66976811 None:intergenic 35.0%
!!! GCCTGTAACCTATTAGTTTT+AGG + chr3_4:66976878-66976897 Msa0515660:CDS 35.0%
AAATGAAGATTACACGGAGT+TGG + chr3_4:66977072-66977091 Msa0515660:CDS 35.0%
AACTAATCCTCGTTTAGTTG+TGG + chr3_4:66977099-66977118 Msa0515660:CDS 35.0%
GCATGGTAGAAACTTAAGTT+TGG + chr3_4:66977217-66977236 Msa0515660:three_prime_UTR 35.0%
GTAGTAGTAACAGCAGTATA+TGG - chr3_4:66977293-66977312 None:intergenic 35.0%
ATATCACAGCACTTTGATTC+TGG + chr3_4:66977383-66977402 Msa0515660:three_prime_UTR 35.0%
ATTCCATCACTGTACTTCAA+AGG + chr3_4:66977521-66977540 Msa0515660:three_prime_UTR 35.0%
CCGTCTGAATTCAATAACAA+GGG - chr3_4:66977813-66977832 None:intergenic 35.0%
!! CCCTTGTTATTGAATTCAGA+CGG + chr3_4:66977810-66977829 Msa0515660:three_prime_UTR 35.0%
TCCGTCTGAATTCAATAACA+AGG - chr3_4:66977814-66977833 None:intergenic 35.0%
! GAAAAGGGTTTTCTGTCTTT+CGG - chr3_4:66975925-66975944 None:intergenic 35.0%
GATGGATATTGGATGGAAAA+GGG - chr3_4:66975940-66975959 None:intergenic 35.0%
! TGATGGATATTGGATGGAAA+AGG - chr3_4:66975941-66975960 None:intergenic 35.0%
!! GATTGATGATGGATATTGGA+TGG - chr3_4:66975947-66975966 None:intergenic 35.0%
!! CGATGATTGATGATGGATAT+TGG - chr3_4:66975951-66975970 None:intergenic 35.0%
AACAATCAGATAGAATGCCA+CGG + chr3_4:66975980-66975999 Msa0515660:exon 35.0%
! CATATTCAAGTTCCTAGCAT+GGG - chr3_4:66976474-66976493 None:intergenic 35.0%
! ACATATTCAAGTTCCTAGCA+TGG - chr3_4:66976475-66976494 None:intergenic 35.0%
! GGGAGTATAATGCTGTATAA+TGG + chr3_4:66976572-66976591 Msa0515660:intron 35.0%
TGATACATCAGCAATCTTGA+TGG - chr3_4:66976792-66976811 None:intergenic 35.0%
!!! GCCTGTAACCTATTAGTTTT+AGG + chr3_4:66976878-66976897 Msa0515660:CDS 35.0%
AAATGAAGATTACACGGAGT+TGG + chr3_4:66977072-66977091 Msa0515660:CDS 35.0%
AACTAATCCTCGTTTAGTTG+TGG + chr3_4:66977099-66977118 Msa0515660:CDS 35.0%
GCATGGTAGAAACTTAAGTT+TGG + chr3_4:66977217-66977236 Msa0515660:three_prime_UTR 35.0%
GTAGTAGTAACAGCAGTATA+TGG - chr3_4:66977293-66977312 None:intergenic 35.0%
ATATCACAGCACTTTGATTC+TGG + chr3_4:66977383-66977402 Msa0515660:three_prime_UTR 35.0%
ATTCCATCACTGTACTTCAA+AGG + chr3_4:66977521-66977540 Msa0515660:three_prime_UTR 35.0%
CCGTCTGAATTCAATAACAA+GGG - chr3_4:66977813-66977832 None:intergenic 35.0%
!! CCCTTGTTATTGAATTCAGA+CGG + chr3_4:66977810-66977829 Msa0515660:three_prime_UTR 35.0%
TCCGTCTGAATTCAATAACA+AGG - chr3_4:66977814-66977833 None:intergenic 35.0%
ATCGATGCGATGATTGATGA+TGG - chr3_4:66975958-66975977 None:intergenic 40.0%
GTAGCATTCTTTGCAAGTAC+CGG - chr3_4:66976106-66976125 None:intergenic 40.0%
CTGACGTTTGAATTCCTCTT+CGG - chr3_4:66976145-66976164 None:intergenic 40.0%
! AGACTTTGGATTTGAGGTCT+TGG - chr3_4:66976170-66976189 None:intergenic 40.0%
ACATGACGCGATGTTTGAAT+AGG + chr3_4:66976703-66976722 Msa0515660:intron 40.0%
AGCCATGCTTGAGAATGATA+TGG + chr3_4:66976748-66976767 Msa0515660:CDS 40.0%
CTCCATATCATTCTCAAGCA+TGG - chr3_4:66976753-66976772 None:intergenic 40.0%
CATGCTTGAGAATGATATGG+AGG + chr3_4:66976751-66976770 Msa0515660:CDS 40.0%
AGAATGATATGGAGGAAAGC+CGG + chr3_4:66976759-66976778 Msa0515660:CDS 40.0%
CTAATAGGTTACAGGCCATT+TGG - chr3_4:66976874-66976893 None:intergenic 40.0%
! GTATCAGGTGAAGCATCTTA+AGG + chr3_4:66976907-66976926 Msa0515660:CDS 40.0%
AGCTTTCTCCCAATTCAGTT+TGG - chr3_4:66976957-66976976 None:intergenic 40.0%
TGAAGCTTATCTTGCCAAAC+AGG + chr3_4:66977129-66977148 Msa0515660:CDS 40.0%
TAATCCACAATGCCTTAGAG+AGG - chr3_4:66977342-66977361 None:intergenic 40.0%
ATAGGTGGAAACACGAAACA+GGG - chr3_4:66977701-66977720 None:intergenic 40.0%
! AGAGACAATCAGAGAAGCAT+AGG - chr3_4:66977719-66977738 None:intergenic 40.0%
!! CTAGATTTGTTGAGATGTGC+AGG + chr3_4:66977737-66977756 Msa0515660:three_prime_UTR 40.0%
! GTTGAGATGTGCAGGTTTTA+AGG + chr3_4:66977745-66977764 Msa0515660:three_prime_UTR 40.0%
ATCGATGCGATGATTGATGA+TGG - chr3_4:66975958-66975977 None:intergenic 40.0%
GTAGCATTCTTTGCAAGTAC+CGG - chr3_4:66976106-66976125 None:intergenic 40.0%
CTGACGTTTGAATTCCTCTT+CGG - chr3_4:66976145-66976164 None:intergenic 40.0%
! AGACTTTGGATTTGAGGTCT+TGG - chr3_4:66976170-66976189 None:intergenic 40.0%
ACATGACGCGATGTTTGAAT+AGG + chr3_4:66976703-66976722 Msa0515660:intron 40.0%
AGCCATGCTTGAGAATGATA+TGG + chr3_4:66976748-66976767 Msa0515660:CDS 40.0%
CTCCATATCATTCTCAAGCA+TGG - chr3_4:66976753-66976772 None:intergenic 40.0%
CATGCTTGAGAATGATATGG+AGG + chr3_4:66976751-66976770 Msa0515660:CDS 40.0%
AGAATGATATGGAGGAAAGC+CGG + chr3_4:66976759-66976778 Msa0515660:CDS 40.0%
CTAATAGGTTACAGGCCATT+TGG - chr3_4:66976874-66976893 None:intergenic 40.0%
! GTATCAGGTGAAGCATCTTA+AGG + chr3_4:66976907-66976926 Msa0515660:CDS 40.0%
AGCTTTCTCCCAATTCAGTT+TGG - chr3_4:66976957-66976976 None:intergenic 40.0%
TGAAGCTTATCTTGCCAAAC+AGG + chr3_4:66977129-66977148 Msa0515660:CDS 40.0%
TAATCCACAATGCCTTAGAG+AGG - chr3_4:66977342-66977361 None:intergenic 40.0%
ATAGGTGGAAACACGAAACA+GGG - chr3_4:66977701-66977720 None:intergenic 40.0%
! AGAGACAATCAGAGAAGCAT+AGG - chr3_4:66977719-66977738 None:intergenic 40.0%
!! CTAGATTTGTTGAGATGTGC+AGG + chr3_4:66977737-66977756 Msa0515660:three_prime_UTR 40.0%
! GTTGAGATGTGCAGGTTTTA+AGG + chr3_4:66977745-66977764 Msa0515660:three_prime_UTR 40.0%
GAATTCCTCTTCGGTTTCGT+TGG - chr3_4:66976136-66976155 None:intergenic 45.0%
GGAAGGAGACTTTGGATTTG+AGG - chr3_4:66976176-66976195 None:intergenic 45.0%
!! GGAAGGAGAGAAAGTATCAC+CGG - chr3_4:66976256-66976275 None:intergenic 45.0%
AAAGTGAAGAGAGAGAGGGA+GGG - chr3_4:66976310-66976329 None:intergenic 45.0%
AAAAGTGAAGAGAGAGAGGG+AGG - chr3_4:66976311-66976330 None:intergenic 45.0%
!! ACCATGTGGTTAGGTTGAAG+TGG + chr3_4:66976402-66976421 Msa0515660:intron 45.0%
ACCACTTCAACCTAACCACA+TGG - chr3_4:66976406-66976425 None:intergenic 45.0%
!! GTTCTGAAGAATCCCATGCT+AGG + chr3_4:66976459-66976478 Msa0515660:intron 45.0%
!! TCAAGCATGGCTCTGAAAAC+TGG - chr3_4:66976740-66976759 None:intergenic 45.0%
AGCATGCCTGGATAACCAAA+TGG + chr3_4:66976856-66976875 Msa0515660:CDS 45.0%
TACAGGCCATTTGGTTATCC+AGG - chr3_4:66976865-66976884 None:intergenic 45.0%
! GGCATTGTGTTGATGTGCAA+AGG - chr3_4:66976993-66977012 None:intergenic 45.0%
AGCAGCATCTTGCAATTGGT+TGG - chr3_4:66977014-66977033 None:intergenic 45.0%
CCAAAGCAGCATCTTGCAAT+TGG - chr3_4:66977018-66977037 None:intergenic 45.0%
! CCAATTGCAAGATGCTGCTT+TGG + chr3_4:66977015-66977034 Msa0515660:CDS 45.0%
GGCAGTGATCATGGAGAATA+TGG + chr3_4:66977036-66977055 Msa0515660:CDS 45.0%
TGAAGATTACACGGAGTTGG+TGG + chr3_4:66977075-66977094 Msa0515660:CDS 45.0%
GGCTGCAGTATTAACCTGTT+TGG - chr3_4:66977146-66977165 None:intergenic 45.0%
TTAATACTGCAGCCACGCTA+GGG + chr3_4:66977152-66977171 Msa0515660:CDS 45.0%
ACGCTAGGGTTATAGGAATG+CGG + chr3_4:66977166-66977185 Msa0515660:exon 45.0%
GGGTTATAGGAATGCGGTTT+AGG + chr3_4:66977172-66977191 Msa0515660:exon 45.0%
! CTTAGTGGGTGATTACTCTG+TGG + chr3_4:66977248-66977267 Msa0515660:three_prime_UTR 45.0%
!! CAGCCTTTGAAGTACAGTGA+TGG - chr3_4:66977527-66977546 None:intergenic 45.0%
!! CTTCAAAGGCTGTGTTGCTT+TGG + chr3_4:66977535-66977554 Msa0515660:three_prime_UTR 45.0%
!! GTGACAACATTGCTGCTTTC+CGG + chr3_4:66977604-66977623 Msa0515660:three_prime_UTR 45.0%
CATAGGTGGAAACACGAAAC+AGG - chr3_4:66977702-66977721 None:intergenic 45.0%
! GACAATCAGAGAAGCATAGG+TGG - chr3_4:66977716-66977735 None:intergenic 45.0%
GAATTCCTCTTCGGTTTCGT+TGG - chr3_4:66976136-66976155 None:intergenic 45.0%
GGAAGGAGACTTTGGATTTG+AGG - chr3_4:66976176-66976195 None:intergenic 45.0%
!! GGAAGGAGAGAAAGTATCAC+CGG - chr3_4:66976256-66976275 None:intergenic 45.0%
AAAGTGAAGAGAGAGAGGGA+GGG - chr3_4:66976310-66976329 None:intergenic 45.0%
AAAAGTGAAGAGAGAGAGGG+AGG - chr3_4:66976311-66976330 None:intergenic 45.0%
!! ACCATGTGGTTAGGTTGAAG+TGG + chr3_4:66976402-66976421 Msa0515660:intron 45.0%
ACCACTTCAACCTAACCACA+TGG - chr3_4:66976406-66976425 None:intergenic 45.0%
!! GTTCTGAAGAATCCCATGCT+AGG + chr3_4:66976459-66976478 Msa0515660:intron 45.0%
!! TCAAGCATGGCTCTGAAAAC+TGG - chr3_4:66976740-66976759 None:intergenic 45.0%
AGCATGCCTGGATAACCAAA+TGG + chr3_4:66976856-66976875 Msa0515660:CDS 45.0%
TACAGGCCATTTGGTTATCC+AGG - chr3_4:66976865-66976884 None:intergenic 45.0%
! GGCATTGTGTTGATGTGCAA+AGG - chr3_4:66976993-66977012 None:intergenic 45.0%
AGCAGCATCTTGCAATTGGT+TGG - chr3_4:66977014-66977033 None:intergenic 45.0%
CCAAAGCAGCATCTTGCAAT+TGG - chr3_4:66977018-66977037 None:intergenic 45.0%
! CCAATTGCAAGATGCTGCTT+TGG + chr3_4:66977015-66977034 Msa0515660:CDS 45.0%
GGCAGTGATCATGGAGAATA+TGG + chr3_4:66977036-66977055 Msa0515660:CDS 45.0%
TGAAGATTACACGGAGTTGG+TGG + chr3_4:66977075-66977094 Msa0515660:CDS 45.0%
GGCTGCAGTATTAACCTGTT+TGG - chr3_4:66977146-66977165 None:intergenic 45.0%
TTAATACTGCAGCCACGCTA+GGG + chr3_4:66977152-66977171 Msa0515660:CDS 45.0%
ACGCTAGGGTTATAGGAATG+CGG + chr3_4:66977166-66977185 Msa0515660:exon 45.0%
GGGTTATAGGAATGCGGTTT+AGG + chr3_4:66977172-66977191 Msa0515660:exon 45.0%
! CTTAGTGGGTGATTACTCTG+TGG + chr3_4:66977248-66977267 Msa0515660:three_prime_UTR 45.0%
!! CAGCCTTTGAAGTACAGTGA+TGG - chr3_4:66977527-66977546 None:intergenic 45.0%
!! CTTCAAAGGCTGTGTTGCTT+TGG + chr3_4:66977535-66977554 Msa0515660:three_prime_UTR 45.0%
!! GTGACAACATTGCTGCTTTC+CGG + chr3_4:66977604-66977623 Msa0515660:three_prime_UTR 45.0%
CATAGGTGGAAACACGAAAC+AGG - chr3_4:66977702-66977721 None:intergenic 45.0%
! GACAATCAGAGAAGCATAGG+TGG - chr3_4:66977716-66977735 None:intergenic 45.0%
TTCTGTCTTTCGGCGTCACA+CGG - chr3_4:66975915-66975934 None:intergenic 50.0%
TCTCGGAGTACACTGTGCAA+CGG - chr3_4:66976008-66976027 None:intergenic 50.0%
CTCGCAAGAGAGACATCTCA+TGG - chr3_4:66976061-66976080 None:intergenic 50.0%
CATGAGATGTCTCTCTTGCG+AGG + chr3_4:66976059-66976078 Msa0515660:CDS 50.0%
GAGAGTGAGGAAGGAGACTT+TGG - chr3_4:66976184-66976203 None:intergenic 50.0%
!! AGAACAAGATCGGTGGTGGA+AGG - chr3_4:66976225-66976244 None:intergenic 50.0%
AAGGAGAACAAGATCGGTGG+TGG - chr3_4:66976229-66976248 None:intergenic 50.0%
GGACGGAAGGAGAACAAGAT+CGG - chr3_4:66976235-66976254 None:intergenic 50.0%
GATCTTGTTCTCCTTCCGTC+CGG + chr3_4:66976234-66976253 Msa0515660:CDS 50.0%
!! AGAAAGTATCACCGGACGGA+AGG - chr3_4:66976248-66976267 None:intergenic 50.0%
!! GGAGAGAAAGTATCACCGGA+CGG - chr3_4:66976252-66976271 None:intergenic 50.0%
!! CAATCTTGATGGTGCCACTC+CGG - chr3_4:66976781-66976800 None:intergenic 50.0%
!! TGCTGCTTTGGCAGTGATCA+TGG + chr3_4:66977027-66977046 Msa0515660:CDS 50.0%
GTTAATACTGCAGCCACGCT+AGG + chr3_4:66977151-66977170 Msa0515660:CDS 50.0%
GCATTCCTATAACCCTAGCG+TGG - chr3_4:66977167-66977186 None:intergenic 50.0%
CTAGAGCAGTTGCCTCTCTA+AGG + chr3_4:66977327-66977346 Msa0515660:three_prime_UTR 50.0%
!! GTTGCCTCTCTAAGGCATTG+TGG + chr3_4:66977335-66977354 Msa0515660:three_prime_UTR 50.0%
ATTGAACCAGTGACTCGCGA+CGG - chr3_4:66977580-66977599 None:intergenic 50.0%
!! ACAACATTGCTGCTTTCCGG+TGG + chr3_4:66977607-66977626 Msa0515660:three_prime_UTR 50.0%
TTCTGTCTTTCGGCGTCACA+CGG - chr3_4:66975915-66975934 None:intergenic 50.0%
TCTCGGAGTACACTGTGCAA+CGG - chr3_4:66976008-66976027 None:intergenic 50.0%
CTCGCAAGAGAGACATCTCA+TGG - chr3_4:66976061-66976080 None:intergenic 50.0%
CATGAGATGTCTCTCTTGCG+AGG + chr3_4:66976059-66976078 Msa0515660:CDS 50.0%
GAGAGTGAGGAAGGAGACTT+TGG - chr3_4:66976184-66976203 None:intergenic 50.0%
!! AGAACAAGATCGGTGGTGGA+AGG - chr3_4:66976225-66976244 None:intergenic 50.0%
AAGGAGAACAAGATCGGTGG+TGG - chr3_4:66976229-66976248 None:intergenic 50.0%
GGACGGAAGGAGAACAAGAT+CGG - chr3_4:66976235-66976254 None:intergenic 50.0%
GATCTTGTTCTCCTTCCGTC+CGG + chr3_4:66976234-66976253 Msa0515660:CDS 50.0%
!! AGAAAGTATCACCGGACGGA+AGG - chr3_4:66976248-66976267 None:intergenic 50.0%
!! GGAGAGAAAGTATCACCGGA+CGG - chr3_4:66976252-66976271 None:intergenic 50.0%
!! CAATCTTGATGGTGCCACTC+CGG - chr3_4:66976781-66976800 None:intergenic 50.0%
!! TGCTGCTTTGGCAGTGATCA+TGG + chr3_4:66977027-66977046 Msa0515660:CDS 50.0%
GTTAATACTGCAGCCACGCT+AGG + chr3_4:66977151-66977170 Msa0515660:CDS 50.0%
GCATTCCTATAACCCTAGCG+TGG - chr3_4:66977167-66977186 None:intergenic 50.0%
CTAGAGCAGTTGCCTCTCTA+AGG + chr3_4:66977327-66977346 Msa0515660:three_prime_UTR 50.0%
!! GTTGCCTCTCTAAGGCATTG+TGG + chr3_4:66977335-66977354 Msa0515660:three_prime_UTR 50.0%
ATTGAACCAGTGACTCGCGA+CGG - chr3_4:66977580-66977599 None:intergenic 50.0%
!! ACAACATTGCTGCTTTCCGG+TGG + chr3_4:66977607-66977626 Msa0515660:three_prime_UTR 50.0%
GTCGTCGTCGTAATCGCTCT+CGG - chr3_4:66976025-66976044 None:intergenic 55.0%
!! TTTGCAAGTACCGGCGTCGT+CGG - chr3_4:66976097-66976116 None:intergenic 55.0%
CGAAGCCAACGAAACCGAAG+AGG + chr3_4:66976128-66976147 Msa0515660:CDS 55.0%
AGGAGAAGCGAGAGTGAGGA+AGG - chr3_4:66976193-66976212 None:intergenic 55.0%
CAAGAGGAGAAGCGAGAGTG+AGG - chr3_4:66976197-66976216 None:intergenic 55.0%
!! GTGGTGGAAGGAGCATCAAG+AGG - chr3_4:66976213-66976232 None:intergenic 55.0%
CGGAAGGAGAACAAGATCGG+TGG - chr3_4:66976232-66976251 None:intergenic 55.0%
TCCTTCCATTCCCGCTCACA+AGG + chr3_4:66976269-66976288 Msa0515660:CDS 55.0%
!! AGGGAGGGTACTGACGAGAA+CGG - chr3_4:66976295-66976314 None:intergenic 55.0%
GATATGGAGGAAAGCCGGAG+TGG + chr3_4:66976764-66976783 Msa0515660:CDS 55.0%
GTACACTGCTGAAGCATGCC+TGG + chr3_4:66976844-66976863 Msa0515660:CDS 55.0%
TGCAGCCACGCTAGGGTTAT+AGG + chr3_4:66977159-66977178 Msa0515660:CDS 55.0%
!! GGCTGTGTTGCTTTGGTTGC+TGG + chr3_4:66977542-66977561 Msa0515660:three_prime_UTR 55.0%
!! CAAACACATGGTGCTGCCAC+CGG - chr3_4:66977626-66977645 None:intergenic 55.0%
GTCGTCGTCGTAATCGCTCT+CGG - chr3_4:66976025-66976044 None:intergenic 55.0%
!! TTTGCAAGTACCGGCGTCGT+CGG - chr3_4:66976097-66976116 None:intergenic 55.0%
CGAAGCCAACGAAACCGAAG+AGG + chr3_4:66976128-66976147 Msa0515660:CDS 55.0%
AGGAGAAGCGAGAGTGAGGA+AGG - chr3_4:66976193-66976212 None:intergenic 55.0%
CAAGAGGAGAAGCGAGAGTG+AGG - chr3_4:66976197-66976216 None:intergenic 55.0%
!! GTGGTGGAAGGAGCATCAAG+AGG - chr3_4:66976213-66976232 None:intergenic 55.0%
CGGAAGGAGAACAAGATCGG+TGG - chr3_4:66976232-66976251 None:intergenic 55.0%
TCCTTCCATTCCCGCTCACA+AGG + chr3_4:66976269-66976288 Msa0515660:CDS 55.0%
!! AGGGAGGGTACTGACGAGAA+CGG - chr3_4:66976295-66976314 None:intergenic 55.0%
GATATGGAGGAAAGCCGGAG+TGG + chr3_4:66976764-66976783 Msa0515660:CDS 55.0%
GTACACTGCTGAAGCATGCC+TGG + chr3_4:66976844-66976863 Msa0515660:CDS 55.0%
TGCAGCCACGCTAGGGTTAT+AGG + chr3_4:66977159-66977178 Msa0515660:CDS 55.0%
!! GGCTGTGTTGCTTTGGTTGC+TGG + chr3_4:66977542-66977561 Msa0515660:three_prime_UTR 55.0%
!! CAAACACATGGTGCTGCCAC+CGG - chr3_4:66977626-66977645 None:intergenic 55.0%
! TACACTGTGCAACGGTGCCG+TGG - chr3_4:66976000-66976019 None:intergenic 60.0%
!! TTGCAAGTACCGGCGTCGTC+GGG - chr3_4:66976096-66976115 None:intergenic 60.0%
GCCTTGTGAGCGGGAATGGA+AGG - chr3_4:66976273-66976292 None:intergenic 60.0%
! AACGGCCTTGTGAGCGGGAA+TGG - chr3_4:66976277-66976296 None:intergenic 60.0%
! ACGAGAACGGCCTTGTGAGC+GGG - chr3_4:66976282-66976301 None:intergenic 60.0%
! GACGAGAACGGCCTTGTGAG+CGG - chr3_4:66976283-66976302 None:intergenic 60.0%
ACGCAGCAGTGAGGATGTGG+GGG - chr3_4:66977666-66977685 None:intergenic 60.0%
GACGCAGCAGTGAGGATGTG+GGG - chr3_4:66977667-66977686 None:intergenic 60.0%
CGACGCAGCAGTGAGGATGT+GGG - chr3_4:66977668-66977687 None:intergenic 60.0%
ACGACGCAGCAGTGAGGATG+TGG - chr3_4:66977669-66977688 None:intergenic 60.0%
GACATCACGACGCAGCAGTG+AGG - chr3_4:66977675-66977694 None:intergenic 60.0%
! TACACTGTGCAACGGTGCCG+TGG - chr3_4:66976000-66976019 None:intergenic 60.0%
!! TTGCAAGTACCGGCGTCGTC+GGG - chr3_4:66976096-66976115 None:intergenic 60.0%
GCCTTGTGAGCGGGAATGGA+AGG - chr3_4:66976273-66976292 None:intergenic 60.0%
! AACGGCCTTGTGAGCGGGAA+TGG - chr3_4:66976277-66976296 None:intergenic 60.0%
! ACGAGAACGGCCTTGTGAGC+GGG - chr3_4:66976282-66976301 None:intergenic 60.0%
! GACGAGAACGGCCTTGTGAG+CGG - chr3_4:66976283-66976302 None:intergenic 60.0%
ACGCAGCAGTGAGGATGTGG+GGG - chr3_4:66977666-66977685 None:intergenic 60.0%
GACGCAGCAGTGAGGATGTG+GGG - chr3_4:66977667-66977686 None:intergenic 60.0%
CGACGCAGCAGTGAGGATGT+GGG - chr3_4:66977668-66977687 None:intergenic 60.0%
ACGACGCAGCAGTGAGGATG+TGG - chr3_4:66977669-66977688 None:intergenic 60.0%
GACATCACGACGCAGCAGTG+AGG - chr3_4:66977675-66977694 None:intergenic 60.0%
GATTACGACCCCGACGACGC+CGG + chr3_4:66976084-66976103 Msa0515660:CDS 65.0%
!! TGCAAGTACCGGCGTCGTCG+GGG - chr3_4:66976095-66976114 None:intergenic 65.0%
TTGCCACCGTCGCGAGTCAC+TGG + chr3_4:66977571-66977590 Msa0515660:three_prime_UTR 65.0%
GAACCAGTGACTCGCGACGG+TGG - chr3_4:66977577-66977596 None:intergenic 65.0%
GATTACGACCCCGACGACGC+CGG + chr3_4:66976084-66976103 Msa0515660:CDS 65.0%
!! TGCAAGTACCGGCGTCGTCG+GGG - chr3_4:66976095-66976114 None:intergenic 65.0%
TTGCCACCGTCGCGAGTCAC+TGG + chr3_4:66977571-66977590 Msa0515660:three_prime_UTR 65.0%
GAACCAGTGACTCGCGACGG+TGG - chr3_4:66977577-66977596 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 66975873 66977843 66975873 ID=Msa0515660;Name=Msa0515660
chr3_4 mRNA 66975873 66977843 66975873 ID=Msa0515660-mRNA-1;Parent=Msa0515660;Name=Msa0515660-mRNA-1;_AED=0.02;_eAED=0.02;_QI=121|1|1|1|1|1|2|663|253
chr3_4 exon 66975873 66976299 66975873 ID=Msa0515660-mRNA-1:exon:17333;Parent=Msa0515660-mRNA-1
chr3_4 exon 66976725 66977843 66976725 ID=Msa0515660-mRNA-1:exon:17334;Parent=Msa0515660-mRNA-1
chr3_4 five_prime_UTR 66975873 66975993 66975873 ID=Msa0515660-mRNA-1:five_prime_utr;Parent=Msa0515660-mRNA-1
chr3_4 CDS 66975994 66976299 66975994 ID=Msa0515660-mRNA-1:cds;Parent=Msa0515660-mRNA-1
chr3_4 CDS 66976725 66977180 66976725 ID=Msa0515660-mRNA-1:cds;Parent=Msa0515660-mRNA-1
chr3_4 three_prime_UTR 66977181 66977843 66977181 ID=Msa0515660-mRNA-1:three_prime_utr;Parent=Msa0515660-mRNA-1
Gene Sequence

>Msa0515660

ATGCCACGGCACCGTTGCACAGTGTACTCCGAGAGCGATTACGACGACGACGACGATAACGTCACCATGAGATGTCTCTCTTGCGAGGACGATTACGACCCCGACGACGCCGGTACTTGCAAAGAATGCTACGACGAAGCCAACGAAACCGAAGAGGAATTCAAACGTCAGATCCAAGACCTCAAATCCAAAGTCTCCTTCCTCACTCTCGCTTCTCCTCTTGATGCTCCTTCCACCACCGATCTTGTTCTCCTTCCGTCCGGTGATACTTTCTCTCCTTCCATTCCCGCTCACAAGGCCGTTCTCGTTAGTCGCTCTCCAGTTTTCAGAGCCATGCTTGAGAATGATATGGAGGAAAGCCGGAGTGGCACCATCAAGATTGCTGATGTATCATACGATGCTCTTCGTGCTTTTGTTAACTACTTGTACACTGCTGAAGCATGCCTGGATAACCAAATGGCCTGTAACCTATTAGTTTTAGGAGAAAAGTATCAGGTGAAGCATCTTAAGGCATATTGTGAGAAGTATTTGATCTCCAAACTGAATTGGGAGAAAGCTATTGTCAACTTTGCCTTTGCACATCAACACAATGCCAACCAATTGCAAGATGCTGCTTTGGCAGTGATCATGGAGAATATGGACAACCTCACTAAAAATGAAGATTACACGGAGTTGGTGGAAACTAATCCTCGTTTAGTTGTGGAAATATATGAAGCTTATCTTGCCAAACAGGTTAATACTGCAGCCACGCTAGGGTTATAG
Protein sequence

>Msa0515660

MPRHRCTVYSESDYDDDDDNVTMRCLSCEDDYDPDDAGTCKECYDEANETEEEFKRQIQDLKSKVSFLTLASPLDAPSTTDLVLLPSGDTFSPSIPAHKAVLVSRSPVFRAMLENDMEESRSGTIKIADVSYDALRAFVNYLYTAEACLDNQMACNLLVLGEKYQVKHLKAYCEKYLISKLNWEKAIVNFAFAHQHNANQLQDAALAVIMENMDNLTKNEDYTELVETNPRLVVEIYEAYLAKQVNTAATLGL*