Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518000 | XP_003602576.2 | 57.522 | 113 | 38 | 2 | 3 | 105 | 8 | 120 | 2.08e-28 | 127 |
| Msa0518000 | XP_003602576.2 | 94.832 | 387 | 13 | 3 | 114 | 495 | 6 | 390 | 0.0 | 748 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518000 | sp|B9RU15|ATXR5_RICCO | 62.169 | 378 | 137 | 4 | 119 | 495 | 2 | 374 | 1.44e-164 | 473 |
| Msa0518000 | sp|B9RU15|ATXR5_RICCO | 70.149 | 67 | 20 | 0 | 42 | 108 | 43 | 109 | 3.56e-27 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518000 | G7JBG7 | 57.522 | 113 | 38 | 2 | 3 | 105 | 8 | 120 | 9.94e-29 | 127 |
| Msa0518000 | G7JBG7 | 94.832 | 387 | 13 | 3 | 114 | 495 | 6 | 390 | 0.0 | 748 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0518000 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518000 | MtrunA17_Chr3g0129881 | 94.832 | 387 | 13 | 3 | 114 | 495 | 6 | 390 | 0.0 | 748 |
| Msa0518000 | MtrunA17_Chr3g0129881 | 57.522 | 113 | 38 | 2 | 3 | 105 | 8 | 120 | 1.91e-32 | 127 |
| Msa0518000 | MtrunA17_Chr1g0146731 | 60.938 | 320 | 121 | 2 | 177 | 495 | 26 | 342 | 3.29e-136 | 397 |
| Msa0518000 | MtrunA17_Chr1g0146731 | 45.312 | 64 | 35 | 0 | 42 | 105 | 10 | 73 | 7.01e-14 | 72.8 |
| Msa0518000 | MtrunA17_Chr1g0146761 | 52.484 | 322 | 116 | 4 | 177 | 495 | 73 | 360 | 6.98e-112 | 335 |
| Msa0518000 | MtrunA17_Chr1g0146761 | 31.633 | 98 | 63 | 1 | 8 | 105 | 23 | 116 | 6.20e-11 | 63.9 |
| Msa0518000 | MtrunA17_Chr3g0129871 | 93.421 | 76 | 5 | 0 | 39 | 114 | 1 | 76 | 1.76e-46 | 156 |
| Msa0518000 | MtrunA17_Chr3g0129871 | 77.419 | 62 | 13 | 1 | 163 | 224 | 7 | 67 | 8.20e-29 | 108 |
| Msa0518000 | MtrunA17_Chr1g0146751 | 56.250 | 128 | 56 | 0 | 338 | 465 | 69 | 196 | 4.59e-43 | 151 |
| Msa0518000 | MtrunA17_Chr1g0146741 | 49.367 | 158 | 55 | 2 | 273 | 415 | 30 | 177 | 7.63e-37 | 134 |
| Msa0518000 | MtrunA17_Chr8g0357751 | 56.311 | 103 | 44 | 1 | 338 | 439 | 14 | 116 | 3.80e-32 | 120 |
| Msa0518000 | MtrunA17_Chr5g0397501 | 49.091 | 55 | 28 | 0 | 53 | 107 | 237 | 291 | 8.71e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518000 | AT5G09790.2 | 65.109 | 321 | 109 | 2 | 175 | 495 | 62 | 379 | 9.62e-155 | 446 |
| Msa0518000 | AT5G09790.2 | 52.083 | 96 | 36 | 3 | 17 | 105 | 19 | 111 | 2.49e-21 | 96.3 |
| Msa0518000 | AT5G09790.1 | 64.798 | 321 | 109 | 2 | 175 | 495 | 62 | 378 | 1.24e-153 | 442 |
| Msa0518000 | AT5G09790.1 | 52.083 | 96 | 36 | 3 | 17 | 105 | 19 | 111 | 2.50e-21 | 96.3 |
| Msa0518000 | AT5G24330.1 | 60.377 | 318 | 123 | 2 | 179 | 495 | 34 | 349 | 7.18e-133 | 389 |
| Msa0518000 | AT5G24330.1 | 69.565 | 46 | 14 | 0 | 60 | 105 | 34 | 79 | 8.45e-17 | 82.0 |
Find 152 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTACTATAGTTTCAATCTA+AGG | 0.205084 | 3_4:+69785510 | Msa0518000:three_prime_UTR |
| CATGCCACCGTTCTCTAAAA+TGG | 0.242537 | 3_4:-69784201 | None:intergenic |
| CGTAGGGATTCTCTTGATTC+CGG | 0.245953 | 3_4:+69782087 | Msa0518000:CDS |
| CTTAATAATCCTATAGAATT+AGG | 0.249310 | 3_4:+69785230 | Msa0518000:three_prime_UTR |
| TGGTGAAAGCCGGGTCTTAT+TGG | 0.291905 | 3_4:+69785099 | Msa0518000:CDS |
| CTAGAGTTCCTATTGGTTCA+TGG | 0.294500 | 3_4:+69777146 | Msa0518000:CDS |
| AAAATTGGTCCTAATTCTAT+AGG | 0.300279 | 3_4:-69785239 | None:intergenic |
| AGAAAATTCTCCATTTCTTC+GGG | 0.303724 | 3_4:+69782061 | Msa0518000:CDS |
| AGTCTGTTGGCTTCTTCTTT+CGG | 0.305637 | 3_4:-69776931 | None:intergenic |
| AATTACTAAGCCACATAATT+AGG | 0.308654 | 3_4:-69785388 | None:intergenic |
| AAGAAAATTCTCCATTTCTT+CGG | 0.317251 | 3_4:+69782060 | Msa0518000:CDS |
| AGGCTTTATTATGACTATAA+TGG | 0.341103 | 3_4:+69785151 | Msa0518000:CDS |
| TGAATCATAAACGACCATTA+AGG | 0.349153 | 3_4:-69784428 | None:intergenic |
| ATTTGCTTCAGCCTCCTATC+AGG | 0.349536 | 3_4:-69784083 | None:intergenic |
| GTAGGGATTCTCTTGATTCC+GGG | 0.353728 | 3_4:+69782088 | Msa0518000:CDS |
| GAAGTGTCTGAGACCGGTTC+TGG | 0.362102 | 3_4:+69777123 | Msa0518000:CDS |
| AATAAGCTGACGTACTTTCC+AGG | 0.362677 | 3_4:+69784152 | Msa0518000:CDS |
| CCCTACGAAGCCCGAAGAAA+TGG | 0.364855 | 3_4:-69782071 | None:intergenic |
| GAACAATCGTGCTTCTTCTC+AGG | 0.365882 | 3_4:+69782110 | Msa0518000:CDS |
| AGGCCAATTCCCTCCCTTAA+TGG | 0.366828 | 3_4:+69784414 | Msa0518000:CDS |
| ATAAATGTCATATCTTTGAT+TGG | 0.375561 | 3_4:-69784574 | None:intergenic |
| TCTTTGTATCTTCCTTAGTA+AGG | 0.376226 | 3_4:-69784360 | None:intergenic |
| ACATAATTAGGCCAGCTATA+TGG | 0.393838 | 3_4:-69785376 | None:intergenic |
| CCCCAAGTGTTGTTCTGAGC+TGG | 0.393884 | 3_4:+69777174 | Msa0518000:CDS |
| TGCTACTGCTTTAACAGCAT+TGG | 0.399408 | 3_4:+69784115 | Msa0518000:CDS |
| TTCTGTACCACCAGAGGTCT+TGG | 0.407511 | 3_4:-69784020 | None:intergenic |
| GGGCAAATCCATGAACCAAT+AGG | 0.417784 | 3_4:-69777154 | None:intergenic |
| AGAAGAAGCACGATTGTTCC+CGG | 0.418393 | 3_4:-69782106 | None:intergenic |
| ATCGGAACTCGAACAACAAT+TGG | 0.420274 | 3_4:-69781863 | None:intergenic |
| GCAGATCTAGGAGCCATTCC+TGG | 0.421695 | 3_4:-69784170 | None:intergenic |
| GGCTTCTTCTTTCGGTGGCA+TGG | 0.424482 | 3_4:-69776923 | None:intergenic |
| TTACTATAGTTTCAATCTAA+GGG | 0.439191 | 3_4:+69785511 | Msa0518000:three_prime_UTR |
| ATGTGGGTCCGGTGAACAAC+CGG | 0.439307 | 3_4:+69781784 | Msa0518000:CDS |
| GGATCTTCTGTAGGAACAAA+TGG | 0.446011 | 3_4:-69784062 | None:intergenic |
| GAATCATAAACGACCATTAA+GGG | 0.451048 | 3_4:-69784427 | None:intergenic |
| TAAATGTCATATCTTTGATT+GGG | 0.451435 | 3_4:-69784573 | None:intergenic |
| GATTAAGCTTGATAGCTTGA+TGG | 0.452643 | 3_4:-69781588 | None:intergenic |
| GCATGGTGCATGTGTGCGGC+TGG | 0.453031 | 3_4:-69776906 | None:intergenic |
| CTCTGGTGGTACAGAAGAAA+AGG | 0.456244 | 3_4:+69784027 | Msa0518000:CDS |
| CAGGACGATGACTAATATAA+TGG | 0.457022 | 3_4:+69776976 | Msa0518000:intron |
| TTCCTCTCAGGCCCTTACTA+AGG | 0.457202 | 3_4:+69784348 | Msa0518000:intron |
| GACCTTGACATCAGAACACT+TGG | 0.458131 | 3_4:-69781903 | None:intergenic |
| ACCTCCTGTGTGAGCAATGT+GGG | 0.458530 | 3_4:+69781768 | Msa0518000:CDS |
| GCTGAGGAGGAGGAGGATTA+CGG | 0.459874 | 3_4:+69781743 | Msa0518000:CDS |
| CTCCACCTTCGAGGAGGAGG+AGG | 0.460011 | 3_4:+69781667 | Msa0518000:CDS |
| CTCCAGCTCAGAACAACACT+TGG | 0.460665 | 3_4:-69777176 | None:intergenic |
| TATGTGGCTTAGTAATTATG+TGG | 0.461586 | 3_4:+69785394 | Msa0518000:three_prime_UTR |
| GGCTGAGTACACGGTGGCTG+AGG | 0.462695 | 3_4:+69781727 | Msa0518000:CDS |
| CTCCTCTTCCTCCACCTTCG+AGG | 0.464032 | 3_4:+69781658 | Msa0518000:CDS |
| CTCCTCGAAGGTGGAGGAAG+AGG | 0.464573 | 3_4:-69781660 | None:intergenic |
| CGACCATTAAGGGAGGGAAT+TGG | 0.466483 | 3_4:-69784417 | None:intergenic |
| TTCCTCCACCTTCGAGGAGG+AGG | 0.469701 | 3_4:+69781664 | Msa0518000:CDS |
| GTTCTGGCTAGAGTTCCTAT+TGG | 0.469825 | 3_4:+69777139 | Msa0518000:CDS |
| AATTTATATGCAGGGAAGGC+AGG | 0.471087 | 3_4:+69785038 | Msa0518000:intron |
| CCATTTCTTCGGGCTTCGTA+GGG | 0.472840 | 3_4:+69782071 | Msa0518000:CDS |
| CTTTGTATCTTCCTTAGTAA+GGG | 0.478851 | 3_4:-69784359 | None:intergenic |
| ATGTGTGAGCGATGTGGATC+TGG | 0.479905 | 3_4:+69777046 | Msa0518000:CDS |
| GGGCAAATCCACGGACCAAT+CGG | 0.479975 | 3_4:-69781881 | None:intergenic |
| TCACATAAAAGCAGCTCCTC+CGG | 0.483953 | 3_4:-69781803 | None:intergenic |
| TGATAGGAGGCTGAAGCAAA+TGG | 0.484670 | 3_4:+69784085 | Msa0518000:CDS |
| TCCATTTCTTCGGGCTTCGT+AGG | 0.489521 | 3_4:+69782070 | Msa0518000:CDS |
| TTCCTACAGAAGATCCTGAT+AGG | 0.493201 | 3_4:+69784069 | Msa0518000:CDS |
| ATAGGAACTCTAGCCAGAAC+CGG | 0.497595 | 3_4:-69777136 | None:intergenic |
| TGTGTGAGATATGATGTTAA+TGG | 0.499519 | 3_4:+69785079 | Msa0518000:CDS |
| ATGGATCGATTAGCAGATCT+AGG | 0.502517 | 3_4:-69784182 | None:intergenic |
| GTGAAGTTGGTTAGCTTACG+AGG | 0.502561 | 3_4:-69776884 | None:intergenic |
| TCACACAACAAAAGCTCCTC+AGG | 0.503103 | 3_4:-69777076 | None:intergenic |
| GTCGTTTATGATTCATGCCA+AGG | 0.503792 | 3_4:+69784436 | Msa0518000:CDS |
| CTGTGTGAGCAATGTGGGTC+CGG | 0.504059 | 3_4:+69781773 | Msa0518000:CDS |
| CTCAGACAAAATGATGAGTT+GGG | 0.506277 | 3_4:-69785189 | None:intergenic |
| CACGGTGGCTGAGGAGGAGG+AGG | 0.506420 | 3_4:+69781736 | Msa0518000:CDS |
| CAGCTCCTCCGGTTGTTCAC+CGG | 0.511216 | 3_4:-69781792 | None:intergenic |
| GCTCAGACAAAATGATGAGT+TGG | 0.512353 | 3_4:-69785190 | None:intergenic |
| TCGGAGACGTCCAAGACCTC+TGG | 0.514165 | 3_4:+69784010 | Msa0518000:CDS |
| TGAGTACACGGTGGCTGAGG+AGG | 0.515374 | 3_4:+69781730 | Msa0518000:CDS |
| CCCCAAGTGTTCTGATGTCA+AGG | 0.520959 | 3_4:+69781901 | Msa0518000:CDS |
| CTGTTGGCTTCTTCTTTCGG+TGG | 0.523013 | 3_4:-69776928 | None:intergenic |
| TCATATGAAGTGTCTGAGAC+CGG | 0.525057 | 3_4:+69777117 | Msa0518000:CDS |
| CTCCTCCTCCTCGAAGGTGG+AGG | 0.525162 | 3_4:-69781666 | None:intergenic |
| ATGATGTTAATGGTGAAAGC+CGG | 0.525411 | 3_4:+69785089 | Msa0518000:CDS |
| AGAGATGAATAGAGAACCCT+AGG | 0.528708 | 3_4:+69785420 | Msa0518000:three_prime_UTR |
| TTTAGAGAACGGTGGCATGC+AGG | 0.534531 | 3_4:+69784205 | Msa0518000:CDS |
| ACCTTGACATCAGAACACTT+GGG | 0.540926 | 3_4:-69781902 | None:intergenic |
| GCCAACAGACTCGTCATCGC+GGG | 0.543998 | 3_4:+69776943 | Msa0518000:CDS |
| TCCAGCTCAGAACAACACTT+GGG | 0.544872 | 3_4:-69777175 | None:intergenic |
| AACAATCGTGCTTCTTCTCA+GGG | 0.545517 | 3_4:+69782111 | Msa0518000:CDS |
| GTACACGGTGGCTGAGGAGG+AGG | 0.545768 | 3_4:+69781733 | Msa0518000:CDS |
| TGATGTTAATGGTGAAAGCC+GGG | 0.546415 | 3_4:+69785090 | Msa0518000:CDS |
| TTCGAGTTCCGATTGGTCCG+TGG | 0.546720 | 3_4:+69781873 | Msa0518000:CDS |
| ACATTTATTGCTGAATACAC+TGG | 0.549884 | 3_4:+69784589 | Msa0518000:CDS |
| ATATAGCTGGCCTAATTATG+TGG | 0.557484 | 3_4:+69785378 | Msa0518000:three_prime_UTR |
| ATTGTTGTTCGAGTTCCGAT+TGG | 0.560719 | 3_4:+69781866 | Msa0518000:CDS |
| CTCGAAGGTGGAGGAAGAGG+AGG | 0.563327 | 3_4:-69781657 | None:intergenic |
| ATATGCAGTGGTTGAGAAGG+AGG | 0.563550 | 3_4:+69777009 | Msa0518000:CDS |
| CCCCTCCTCCTCCTCGAAGG+TGG | 0.568245 | 3_4:-69781669 | None:intergenic |
| ATGCTGTTAAAGCAGTAGCA+AGG | 0.571401 | 3_4:-69784112 | None:intergenic |
| TAAATATGCAGTGGTTGAGA+AGG | 0.574113 | 3_4:+69777006 | Msa0518000:CDS |
| TGCTGTTAAAGCAGTAGCAA+GGG | 0.574924 | 3_4:-69784111 | None:intergenic |
| ATCATGAAAATTCTTTCCTG+AGG | 0.576764 | 3_4:-69785266 | None:intergenic |
| AATTTCTTAAAGTGTTACCG+TGG | 0.577434 | 3_4:+69785333 | Msa0518000:three_prime_UTR |
| ATGTGTGCGGCTGGTGAAGT+TGG | 0.579228 | 3_4:-69776897 | None:intergenic |
| CCACCTTCGAGGAGGAGGAG+GGG | 0.583605 | 3_4:+69781669 | Msa0518000:CDS |
| TCCACCTTCGAGGAGGAGGA+GGG | 0.584045 | 3_4:+69781668 | Msa0518000:CDS |
| CTTTAGATGCTATGAAGCGT+CGG | 0.589068 | 3_4:+69783991 | Msa0518000:intron |
| ATTCCCCTCCTCCTCCTCGA+AGG | 0.589669 | 3_4:-69781672 | None:intergenic |
| CTTGATAGCTTGATGGAAGA+CGG | 0.590190 | 3_4:-69781581 | None:intergenic |
| GCTGACGTACTTTCCAGGAA+TGG | 0.592256 | 3_4:+69784157 | Msa0518000:CDS |
| CTCCTATCAGGATCTTCTGT+AGG | 0.592606 | 3_4:-69784071 | None:intergenic |
| GAACACTTGGGGCAAATCCA+CGG | 0.593747 | 3_4:-69781890 | None:intergenic |
| GAAGACGGCGATGGAGACGC+CGG | 0.596034 | 3_4:-69781566 | None:intergenic |
| CCTTGACATCAGAACACTTG+GGG | 0.598005 | 3_4:-69781901 | None:intergenic |
| ATATAAGAGGGCTGAGTACA+CGG | 0.598652 | 3_4:+69781718 | Msa0518000:intron |
| AACATTGCTCGCTTCATCAG+TGG | 0.600548 | 3_4:+69784724 | Msa0518000:CDS |
| AGCTTGATGGAAGACGGCGA+TGG | 0.603823 | 3_4:-69781575 | None:intergenic |
| ACCCGCGATGACGAGTCTGT+TGG | 0.610544 | 3_4:-69776944 | None:intergenic |
| TTATGTGACAAATGTGACAA+TGG | 0.612992 | 3_4:+69781818 | Msa0518000:CDS |
| ATTTCTTAAAGTGTTACCGT+GGG | 0.614586 | 3_4:+69785334 | Msa0518000:three_prime_UTR |
| TGTGAGGTGCATGGGTGCGG+CGG | 0.615402 | 3_4:-69781610 | None:intergenic |
| GCTACTCGAGATATTTCCAA+GGG | 0.615468 | 3_4:+69785124 | Msa0518000:CDS |
| CTCTTCCTCCACCTTCGAGG+AGG | 0.618161 | 3_4:+69781661 | Msa0518000:CDS |
| TGCTACTCGAGATATTTCCA+AGG | 0.618331 | 3_4:+69785123 | Msa0518000:CDS |
| TCGTTTATGATTCATGCCAA+GGG | 0.622600 | 3_4:+69784437 | Msa0518000:CDS |
| TGAAGTTGGTTAGCTTACGA+GGG | 0.624344 | 3_4:-69776883 | None:intergenic |
| TTGTGTGACAAATGCGACAA+AGG | 0.628248 | 3_4:+69777091 | Msa0518000:CDS |
| CGGACCCACATTGCTCACAC+AGG | 0.629732 | 3_4:-69781772 | None:intergenic |
| CGATGACTAATATAATGGCG+AGG | 0.630890 | 3_4:+69776981 | Msa0518000:CDS |
| CATAAACGACCATTAAGGGA+GGG | 0.633637 | 3_4:-69784423 | None:intergenic |
| CTACAGAAGATCCTGATAGG+AGG | 0.635132 | 3_4:+69784072 | Msa0518000:CDS |
| GGTGGCATGGTGCATGTGTG+CGG | 0.635748 | 3_4:-69776910 | None:intergenic |
| GAAGTTGGTTAGCTTACGAG+GGG | 0.643714 | 3_4:-69776882 | None:intergenic |
| GATGACTAATATAATGGCGA+GGG | 0.645664 | 3_4:+69776982 | Msa0518000:CDS |
| TCATAAACGACCATTAAGGG+AGG | 0.648173 | 3_4:-69784424 | None:intergenic |
| AGCCAACAGACTCGTCATCG+CGG | 0.654231 | 3_4:+69776942 | Msa0518000:CDS |
| ACCCACATTGCTCACACAGG+AGG | 0.655882 | 3_4:-69781769 | None:intergenic |
| GAGTAGCAACCAATAAGACC+CGG | 0.658883 | 3_4:-69785108 | None:intergenic |
| GGCGAGGGCTAAATATGCAG+TGG | 0.659115 | 3_4:+69776997 | Msa0518000:CDS |
| GACCTCCTGTGTGAGCAATG+TGG | 0.660393 | 3_4:+69781767 | Msa0518000:CDS |
| CCAGCTCAGAACAACACTTG+GGG | 0.668343 | 3_4:-69777174 | None:intergenic |
| TGGTACAGAAGAAAAGGAGA+AGG | 0.674031 | 3_4:+69784033 | Msa0518000:CDS |
| GAGACGTCCAAGACCTCTGG+TGG | 0.674893 | 3_4:+69784013 | Msa0518000:CDS |
| TGGGTCCGGTGAACAACCGG+AGG | 0.676363 | 3_4:+69781787 | Msa0518000:CDS |
| GCAATGTAGCTATACTGTGG+AGG | 0.683236 | 3_4:+69784543 | Msa0518000:intron |
| GACTGCATGTGTGAGCGATG+TGG | 0.685024 | 3_4:+69777040 | Msa0518000:CDS |
| AAAATACAACGAGTTGCCCA+CGG | 0.685626 | 3_4:-69785350 | None:intergenic |
| TGGATCTGGTGAACAACCTG+AGG | 0.697540 | 3_4:+69777060 | Msa0518000:CDS |
| TACTCGAGATATTTCCAAGG+GGG | 0.699750 | 3_4:+69785126 | Msa0518000:CDS |
| GTTATCTGTGCTGATAAACG+TGG | 0.699829 | 3_4:+69784700 | Msa0518000:CDS |
| TGCATAGCTATGACTAAACG+AGG | 0.704634 | 3_4:+69784394 | Msa0518000:CDS |
| CTACTCGAGATATTTCCAAG+GGG | 0.743213 | 3_4:+69785125 | Msa0518000:CDS |
| TATGCAATGTAGCTATACTG+TGG | 0.744881 | 3_4:+69784540 | Msa0518000:intron |
| AAGTTGGTTAGCTTACGAGG+GGG | 0.753964 | 3_4:-69776881 | None:intergenic |
| TAAGAGGGCTGAGTACACGG+TGG | 0.812154 | 3_4:+69781721 | Msa0518000:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTATAAAATTTT+TGG | - | chr3_4:69781097-69781116 | None:intergenic | 0.0% |
| !!! | TAAAAAAAATATTTTTTTAT+TGG | + | chr3_4:69782171-69782190 | Msa0518000:intron | 0.0% |
| !! | GTAATACATATATTATTTAA+TGG | + | chr3_4:69778154-69778173 | Msa0518000:intron | 10.0% |
| !! | AATTATTTACATAAAATACA+TGG | - | chr3_4:69778591-69778610 | None:intergenic | 10.0% |
| !!! | ATTTTATGTAAATAATTGTT+CGG | + | chr3_4:69778594-69778613 | Msa0518000:intron | 10.0% |
| !!! | TATTTTCTTCTATATATTAA+AGG | + | chr3_4:69780197-69780216 | Msa0518000:intron | 10.0% |
| !! | AACTTATATGATATTATAAA+TGG | + | chr3_4:69780403-69780422 | Msa0518000:intron | 10.0% |
| !! | AAACAATTTATAATTTATGA+CGG | - | chr3_4:69780615-69780634 | None:intergenic | 10.0% |
| !!! | TTTTGAATAAGATTTTTTTT+TGG | - | chr3_4:69780973-69780992 | None:intergenic | 10.0% |
| !! | AAACATATGAATTAATTATT+TGG | + | chr3_4:69782454-69782473 | Msa0518000:intron | 10.0% |
| !!! | ATCTTTAGAAAATATTTAAT+TGG | + | chr3_4:69783741-69783760 | Msa0518000:intron | 10.0% |
| !! | TATTAGCTATCAATATAATA+TGG | + | chr3_4:69777276-69777295 | Msa0518000:intron | 15.0% |
| !! | ATTGAAATAGTTATTTGAAA+AGG | + | chr3_4:69777770-69777789 | Msa0518000:intron | 15.0% |
| !! | TTGAAATAGTTATTTGAAAA+GGG | + | chr3_4:69777771-69777790 | Msa0518000:intron | 15.0% |
| !!! | ATCAATTTGTTTTGAAATTA+TGG | + | chr3_4:69778090-69778109 | Msa0518000:intron | 15.0% |
| !! | AAAATATATTTATCGTTCAT+TGG | + | chr3_4:69778968-69778987 | Msa0518000:intron | 15.0% |
| !! | GTGTTTATATAATATGAAAT+CGG | - | chr3_4:69779592-69779611 | None:intergenic | 15.0% |
| !! | TATAGACAAGAAATAAAAAT+TGG | - | chr3_4:69779640-69779659 | None:intergenic | 15.0% |
| !! | GTTTATTAGAAATTGAAAAA+CGG | + | chr3_4:69779861-69779880 | Msa0518000:intron | 15.0% |
| !!! | CATTTATAATGTTTTCAAAT+TGG | + | chr3_4:69780167-69780186 | Msa0518000:intron | 15.0% |
| !! | TAATATATAGAAGAAAATAG+TGG | - | chr3_4:69780196-69780215 | None:intergenic | 15.0% |
| !!! | AACATAATATATTTTTTGAG+AGG | + | chr3_4:69780276-69780295 | Msa0518000:intron | 15.0% |
| !!! | ATTTTAAAAGTGAATAAATC+AGG | - | chr3_4:69780503-69780522 | None:intergenic | 15.0% |
| !!! | TGATTTATTCACTTTTAAAA+TGG | + | chr3_4:69780502-69780521 | Msa0518000:intron | 15.0% |
| !! | AAACAAAAAAAAAACATCAA+AGG | + | chr3_4:69781330-69781349 | Msa0518000:intron | 15.0% |
| !! | ATATATACATGATATCTAAT+TGG | + | chr3_4:69783935-69783954 | Msa0518000:intron | 15.0% |
| !!! | TTTAAAGAACTAAAATTTTG+AGG | + | chr3_4:69784931-69784950 | Msa0518000:intron | 15.0% |
| !! | AAAAAAAAACTAAATGAAGA+AGG | - | chr3_4:69785450-69785469 | None:intergenic | 15.0% |
| !! | AGTAAGTGATCAATATAATA+TGG | + | chr3_4:69777208-69777227 | Msa0518000:intron | 20.0% |
| !! | TATTTATGCATAAATGTCAA+TGG | + | chr3_4:69777501-69777520 | Msa0518000:intron | 20.0% |
| !! | ATTTATGCATAAATGTCAAT+GGG | + | chr3_4:69777502-69777521 | Msa0518000:intron | 20.0% |
| !!! | CTTAATAATTGATTCACTAA+CGG | - | chr3_4:69777625-69777644 | None:intergenic | 20.0% |
| !! | AACATTAAAAATTGAGAAAC+AGG | + | chr3_4:69777716-69777735 | Msa0518000:intron | 20.0% |
| !! | TGTTTATCTTGAAAAACATA+TGG | + | chr3_4:69777945-69777964 | Msa0518000:intron | 20.0% |
| !! | AATTTAATGTGATTCATTGT+CGG | + | chr3_4:69778116-69778135 | Msa0518000:intron | 20.0% |
| !! | GCAATACATATATTATTCAT+TGG | + | chr3_4:69778530-69778549 | Msa0518000:intron | 20.0% |
| !!! | ATTTATTGTTCTTTGGAAAT+TGG | + | chr3_4:69778826-69778845 | Msa0518000:intron | 20.0% |
| !!! | TTAAGATAGTTTTTTGAAAG+TGG | + | chr3_4:69779156-69779175 | Msa0518000:intron | 20.0% |
| !!! | TATCAAGTTGTTTGTAAATT+AGG | + | chr3_4:69779444-69779463 | Msa0518000:intron | 20.0% |
| !! | TTGTATTTCTCAATTTCTAA+TGG | - | chr3_4:69779537-69779556 | None:intergenic | 20.0% |
| !! | CATTGAATAATTAACGTATA+TGG | - | chr3_4:69779700-69779719 | None:intergenic | 20.0% |
| !! | GTATTAAAAAAAAGCTTGAA+TGG | - | chr3_4:69779834-69779853 | None:intergenic | 20.0% |
| !!! | TATTAAAGGAAATACCTTTT+AGG | + | chr3_4:69780211-69780230 | Msa0518000:intron | 20.0% |
| !!! | TTTAGAATTTTGATCCTAAA+AGG | - | chr3_4:69780228-69780247 | None:intergenic | 20.0% |
| !! | TTTGAATCACATTAATTGTT+TGG | - | chr3_4:69781036-69781055 | None:intergenic | 20.0% |
| !! | TGAACCCAAAAAAAAAAAAA+TGG | - | chr3_4:69781150-69781169 | None:intergenic | 20.0% |
| !!! | AATTTGTGTTAACTCTAAAA+TGG | - | chr3_4:69781431-69781450 | None:intergenic | 20.0% |
| !!! | GCTTGTTAATATATATAAGA+GGG | + | chr3_4:69781706-69781725 | Msa0518000:intron | 20.0% |
| !!! | TCGTGGATTATAAATATTTT+TGG | + | chr3_4:69782378-69782397 | Msa0518000:intron | 20.0% |
| !!! | TTTAAATTTTTGTGTGAACA+TGG | + | chr3_4:69782483-69782502 | Msa0518000:intron | 20.0% |
| !!! | TTAAATTTTTGTGTGAACAT+GGG | + | chr3_4:69782484-69782503 | Msa0518000:intron | 20.0% |
| !!! | TTGATTTGTTGTAGTTATTT+TGG | + | chr3_4:69782621-69782640 | Msa0518000:intron | 20.0% |
| !! | TTCAAATCAAACAATAGAAT+AGG | - | chr3_4:69782964-69782983 | None:intergenic | 20.0% |
| !!! | TATTCTATTGTTTGATTTGA+AGG | + | chr3_4:69782963-69782982 | Msa0518000:intron | 20.0% |
| !! | AAAAGATTAAGTGATTAAGT+TGG | + | chr3_4:69783329-69783348 | Msa0518000:intron | 20.0% |
| !! | AGTATAATTTGACATTAATG+TGG | + | chr3_4:69783423-69783442 | Msa0518000:intron | 20.0% |
| !!! | CAAAAGAACTAGAATTTTTT+TGG | + | chr3_4:69783536-69783555 | Msa0518000:intron | 20.0% |
| !! | AAAAGTTGTAGGAAAAAAAA+AGG | - | chr3_4:69783797-69783816 | None:intergenic | 20.0% |
| !! | ATCAAAACATAAAAAGTTGT+AGG | - | chr3_4:69783808-69783827 | None:intergenic | 20.0% |
| !!! | TATGTTATCTTAACTTTTCT+TGG | + | chr3_4:69784506-69784525 | Msa0518000:intron | 20.0% |
| !! | TAAATGTCATATCTTTGATT+GGG | - | chr3_4:69784576-69784595 | None:intergenic | 20.0% |
| !! | ATAAATGTCATATCTTTGAT+TGG | - | chr3_4:69784577-69784596 | None:intergenic | 20.0% |
| !! | CATGTTAATCTTGAATTAAA+GGG | + | chr3_4:69784786-69784805 | Msa0518000:intron | 20.0% |
| !! | AATAAGAATGTCAAAATGAA+TGG | - | chr3_4:69784857-69784876 | None:intergenic | 20.0% |
| !! | CTTAATAATCCTATAGAATT+AGG | + | chr3_4:69785230-69785249 | Msa0518000:three_prime_UTR | 20.0% |
| !!! | AATTTTTTGTTGAATCTGAA+AGG | - | chr3_4:69785317-69785336 | None:intergenic | 20.0% |
| !! | TTTACTATAGTTTCAATCTA+AGG | + | chr3_4:69785510-69785529 | Msa0518000:three_prime_UTR | 20.0% |
| !! | TTACTATAGTTTCAATCTAA+GGG | + | chr3_4:69785511-69785530 | Msa0518000:three_prime_UTR | 20.0% |
| ! | ATGGTGTGAAAATAAAAAGA+CGG | + | chr3_4:69777227-69777246 | Msa0518000:intron | 25.0% |
| !!! | AGCTAATATTTTAGCAAAGA+CGG | - | chr3_4:69777264-69777283 | None:intergenic | 25.0% |
| ! | ATGGTGTGTAAATAAAAAGA+CGG | + | chr3_4:69777295-69777314 | Msa0518000:intron | 25.0% |
| !!! | AATTACTTTTTCAGCAAAGA+CGG | - | chr3_4:69777332-69777351 | None:intergenic | 25.0% |
| ! | TACTTAAACATACATGCATA+GGG | - | chr3_4:69777441-69777460 | None:intergenic | 25.0% |
| !!! | TTTTATTTTCATTATTGGCC+TGG | - | chr3_4:69777475-69777494 | None:intergenic | 25.0% |
| !! | TCAAGTTTATTGATTGACAT+TGG | + | chr3_4:69777532-69777551 | Msa0518000:intron | 25.0% |
| ! | AACTATCTGTATAACATACA+TGG | - | chr3_4:69777665-69777684 | None:intergenic | 25.0% |
| ! | AAATAGTTATTTGAAAAGGG+TGG | + | chr3_4:69777774-69777793 | Msa0518000:intron | 25.0% |
| ! | TTATCTTGAAAAACATATGG+TGG | + | chr3_4:69777948-69777967 | Msa0518000:intron | 25.0% |
| ! | TTCATTGGAAATTGAGAAAA+TGG | + | chr3_4:69778036-69778055 | Msa0518000:intron | 25.0% |
| !! | AACTATATCATTAGCTTATG+TGG | - | chr3_4:69778447-69778466 | None:intergenic | 25.0% |
| ! | AAGCTAATGATATAGTTGTT+AGG | + | chr3_4:69778450-69778469 | Msa0518000:intron | 25.0% |
| ! | AATGATATAGTTGTTAGGAA+AGG | + | chr3_4:69778455-69778474 | Msa0518000:intron | 25.0% |
| ! | ATGATATAGTTGTTAGGAAA+GGG | + | chr3_4:69778456-69778475 | Msa0518000:intron | 25.0% |
| ! | ATGTAAATAATTGTTCGGAA+AGG | + | chr3_4:69778599-69778618 | Msa0518000:intron | 25.0% |
| ! | TGTAAATAATTGTTCGGAAA+GGG | + | chr3_4:69778600-69778619 | Msa0518000:intron | 25.0% |
| ! | GCAATACATTTATTGTTCTT+TGG | + | chr3_4:69778819-69778838 | Msa0518000:intron | 25.0% |
| ! | CATTAAATCCATAAATTGTG+TGG | - | chr3_4:69778917-69778936 | None:intergenic | 25.0% |
| ! | ACTAAAAATTGAGAAACAAG+CGG | + | chr3_4:69779104-69779123 | Msa0518000:intron | 25.0% |
| ! | AACTATCTTAATAGCATACA+TGG | - | chr3_4:69779147-69779166 | None:intergenic | 25.0% |
| ! | GCAATACATATATTATTCGT+TGG | + | chr3_4:69779231-69779250 | Msa0518000:intron | 25.0% |
| ! | ATTCTATTGAGACAATTGTT+CGG | + | chr3_4:69779295-69779314 | Msa0518000:intron | 25.0% |
| !!! | CTTGTCTATATCTTTTTTGA+AGG | + | chr3_4:69779650-69779669 | Msa0518000:intron | 25.0% |
| !!! | ACTTAAATGTAACTTGTTGT+TGG | + | chr3_4:69779808-69779827 | Msa0518000:intron | 25.0% |
| !!! | ACCTCTCTGTTTTATTTTTT+GGG | - | chr3_4:69779891-69779910 | None:intergenic | 25.0% |
| ! | TCTACTATATTGTCAAACAA+AGG | + | chr3_4:69780252-69780271 | Msa0518000:intron | 25.0% |
| !! | CAACAATTGAATTTTATGCA+CGG | - | chr3_4:69780341-69780360 | None:intergenic | 25.0% |
| ! | ATTCAATTGTTGATATGACA+CGG | + | chr3_4:69780349-69780368 | Msa0518000:intron | 25.0% |
| !!! | TTTTTTTTTGGGTTCATTCA+TGG | + | chr3_4:69781154-69781173 | Msa0518000:intron | 25.0% |
| ! | TAAAAGTCTGTGTAAAAAAC+CGG | + | chr3_4:69781213-69781232 | Msa0518000:intron | 25.0% |
| !! | CGCTTGTTAATATATATAAG+AGG | + | chr3_4:69781705-69781724 | Msa0518000:intron | 25.0% |
| ! | TGTGATTGTGATTATTAATG+TGG | + | chr3_4:69781993-69782012 | Msa0518000:intron | 25.0% |
| ! | AAGAAAATTCTCCATTTCTT+CGG | + | chr3_4:69782060-69782079 | Msa0518000:CDS | 25.0% |
| !! | TTTTGTCAATATGCAATGTT+TGG | + | chr3_4:69782233-69782252 | Msa0518000:intron | 25.0% |
| ! | CAATGTTTGGATATTTGATT+TGG | + | chr3_4:69782246-69782265 | Msa0518000:intron | 25.0% |
| !! | TAAATTTTTGTGTGAACATG+GGG | + | chr3_4:69782485-69782504 | Msa0518000:intron | 25.0% |
| ! | TGTTTCTTTACAAATTGTGT+TGG | + | chr3_4:69782551-69782570 | Msa0518000:intron | 25.0% |
| ! | CAAATCAAGCTTAAAATTTG+TGG | - | chr3_4:69782609-69782628 | None:intergenic | 25.0% |
| ! | AACATTACTATCGCAAAAAT+AGG | - | chr3_4:69782797-69782816 | None:intergenic | 25.0% |
| ! | CGATAGTAATGTTAATCTTA+AGG | + | chr3_4:69782804-69782823 | Msa0518000:intron | 25.0% |
| !!! | AGATTGTTTCTGAAAATTTG+TGG | + | chr3_4:69783079-69783098 | Msa0518000:intron | 25.0% |
| !!! | GATTGTTTCTGAAAATTTGT+GGG | + | chr3_4:69783080-69783099 | Msa0518000:intron | 25.0% |
| !!! | ATTGTTTCTGAAAATTTGTG+GGG | + | chr3_4:69783081-69783100 | Msa0518000:intron | 25.0% |
| ! | ATTTCGTACAAAGTCATTTA+GGG | - | chr3_4:69783135-69783154 | None:intergenic | 25.0% |
| ! | TATTTCGTACAAAGTCATTT+AGG | - | chr3_4:69783136-69783155 | None:intergenic | 25.0% |
| !!! | TAGAATTTTTTTGGCTTACT+AGG | + | chr3_4:69783545-69783564 | Msa0518000:intron | 25.0% |
| ! | TGAAGGAACAAATATCAAAA+GGG | - | chr3_4:69783632-69783651 | None:intergenic | 25.0% |
| ! | ATGAAGGAACAAATATCAAA+AGG | - | chr3_4:69783633-69783652 | None:intergenic | 25.0% |
| ! | TCTTCTTAATTTATCCATTC+TGG | + | chr3_4:69783967-69783986 | Msa0518000:intron | 25.0% |
| ! | AACTATGATTTCCAACTTTA+TGG | - | chr3_4:69784486-69784505 | None:intergenic | 25.0% |
| ! | GCATGTTAATCTTGAATTAA+AGG | + | chr3_4:69784785-69784804 | Msa0518000:intron | 25.0% |
| ! | AAGCTAAACAGCATATAAAA+TGG | - | chr3_4:69784901-69784920 | None:intergenic | 25.0% |
| !!! | TTTTATATGCTGTTTAGCTT+TGG | + | chr3_4:69784901-69784920 | Msa0518000:intron | 25.0% |
| ! | ATATCATTGCACAAAAGAAA+AGG | - | chr3_4:69784982-69785001 | None:intergenic | 25.0% |
| !!! | CAATGATATTGCTATTTCTT+CGG | + | chr3_4:69784993-69785012 | Msa0518000:intron | 25.0% |
| !!! | AGGCTTTATTATGACTATAA+TGG | + | chr3_4:69785151-69785170 | Msa0518000:CDS | 25.0% |
| ! | AAAATTGGTCCTAATTCTAT+AGG | - | chr3_4:69785242-69785261 | None:intergenic | 25.0% |
| ! | AATTACTAAGCCACATAATT+AGG | - | chr3_4:69785391-69785410 | None:intergenic | 25.0% |
| GTACTTAAACATACATGCAT+AGG | - | chr3_4:69777442-69777461 | None:intergenic | 30.0% | |
| ! | TTTTGATGTGATTCAGAGTT+TGG | + | chr3_4:69777983-69778002 | Msa0518000:intron | 30.0% |
| ATTGGAAATTGAGAAAATGG+TGG | + | chr3_4:69778039-69778058 | Msa0518000:intron | 30.0% | |
| GAAACTACAGAGAGAAAATA+CGG | - | chr3_4:69778215-69778234 | None:intergenic | 30.0% | |
| GAATATGCTAGAAAATAACG+AGG | + | chr3_4:69778262-69778281 | Msa0518000:intron | 30.0% | |
| ACCTTCATTTGTTTGAATCA+AGG | + | chr3_4:69778298-69778317 | Msa0518000:intron | 30.0% | |
| CCTTCATTTGTTTGAATCAA+GGG | + | chr3_4:69778299-69778318 | Msa0518000:intron | 30.0% | |
| TTAACTACGAATCACACTAA+AGG | - | chr3_4:69778496-69778515 | None:intergenic | 30.0% | |
| ! | ATGTATTGCAAAAGTGTGAA+TGG | - | chr3_4:69778519-69778538 | None:intergenic | 30.0% |
| ATTGAAAGTTGAAAAGCAAG+TGG | + | chr3_4:69778693-69778712 | Msa0518000:intron | 30.0% | |
| AACTATCTCATTAGCATATG+TGG | - | chr3_4:69778735-69778754 | None:intergenic | 30.0% | |
| ATGAGATAGTTGTTCAGAAA+TGG | + | chr3_4:69778744-69778763 | Msa0518000:intron | 30.0% | |
| AGAAATGGTGGCATAATTTA+TGG | + | chr3_4:69778759-69778778 | Msa0518000:intron | 30.0% | |
| ! | TTCTTTGGAAATTGGAAAAC+AGG | + | chr3_4:69778834-69778853 | Msa0518000:intron | 30.0% |
| AAAATGTGCCACACAATTTA+TGG | + | chr3_4:69778906-69778925 | Msa0518000:intron | 30.0% | |
| ACATGACAAGACAAATAGTT+AGG | - | chr3_4:69779012-69779031 | None:intergenic | 30.0% | |
| ! | GGTCATTCAAGATTTTTGAA+AGG | + | chr3_4:69779069-69779088 | Msa0518000:intron | 30.0% |
| GCATACATGGTAAGATAAAT+AGG | - | chr3_4:69779134-69779153 | None:intergenic | 30.0% | |
| !!! | AGATAGTTTTTTGAAAGTGG+TGG | + | chr3_4:69779159-69779178 | Msa0518000:intron | 30.0% |
| AACAATACATGCATTGCAAA+AGG | - | chr3_4:69779374-69779393 | None:intergenic | 30.0% | |
| ! | AAACAACTTGATAGCATACA+TGG | - | chr3_4:69779437-69779456 | None:intergenic | 30.0% |
| TGAGTATATGGCAAGATAAT+CGG | - | chr3_4:69779567-69779586 | None:intergenic | 30.0% | |
| ATGAAATCGGATTGAGTATA+TGG | - | chr3_4:69779579-69779598 | None:intergenic | 30.0% | |
| ACCCAAAAAATAAAACAGAG+AGG | + | chr3_4:69779887-69779906 | Msa0518000:intron | 30.0% | |
| !!! | CACCTCTCTGTTTTATTTTT+TGG | - | chr3_4:69779892-69779911 | None:intergenic | 30.0% |
| ATAAAACAGAGAGGTGATTT+AGG | + | chr3_4:69779896-69779915 | Msa0518000:intron | 30.0% | |
| AGGTGATTTAGGTAATAAAG+CGG | + | chr3_4:69779907-69779926 | Msa0518000:intron | 30.0% | |
| !!! | AAGCGGATTTTTTTTTAACG+AGG | + | chr3_4:69779924-69779943 | Msa0518000:intron | 30.0% |
| ! | AATTGAATTTTATGCACGGT+TGG | - | chr3_4:69780337-69780356 | None:intergenic | 30.0% |
| ! | CTCGTGGATTTAACTTAATT+AGG | + | chr3_4:69780436-69780455 | Msa0518000:intron | 30.0% |
| CCAAAAAAAAAAAAATGGCC+GGG | - | chr3_4:69781145-69781164 | None:intergenic | 30.0% | |
| CCCAAAAAAAAAAAAATGGC+CGG | - | chr3_4:69781146-69781165 | None:intergenic | 30.0% | |
| !!! | CCGGCCATTTTTTTTTTTTT+GGG | + | chr3_4:69781143-69781162 | Msa0518000:intron | 30.0% |
| TCATCAAACATAACATTCAC+CGG | + | chr3_4:69781270-69781289 | Msa0518000:intron | 30.0% | |
| !! | TTGTGTTAACTCTAAAATGG+TGG | - | chr3_4:69781428-69781447 | None:intergenic | 30.0% |
| ! | AGCTTCTTTTGAATTTTGTG+AGG | - | chr3_4:69781629-69781648 | None:intergenic | 30.0% |
| TTATGTGACAAATGTGACAA+TGG | + | chr3_4:69781818-69781837 | Msa0518000:CDS | 30.0% | |
| AGAAAATTCTCCATTTCTTC+GGG | + | chr3_4:69782061-69782080 | Msa0518000:CDS | 30.0% | |
| !! | GTTTTTGATCAGTTGTTGTT+TGG | + | chr3_4:69782282-69782301 | Msa0518000:intron | 30.0% |
| TAAAGAAACATTGCCACAAA+CGG | - | chr3_4:69782541-69782560 | None:intergenic | 30.0% | |
| TTTACAAATTGTGTTGGACA+TGG | + | chr3_4:69782557-69782576 | Msa0518000:intron | 30.0% | |
| ! | CTATAGATTTTTCCATCATC+AGG | + | chr3_4:69782581-69782600 | Msa0518000:intron | 30.0% |
| !!! | TTGTAGTTATTTTGGTGTCT+TGG | + | chr3_4:69782629-69782648 | Msa0518000:intron | 30.0% |
| !!! | TGTAGTTATTTTGGTGTCTT+GGG | + | chr3_4:69782630-69782649 | Msa0518000:intron | 30.0% |
| ATTCCTTCACAAATTGGTTA+TGG | + | chr3_4:69782744-69782763 | Msa0518000:intron | 30.0% | |
| ATTACTATCGCAAAAATAGG+AGG | - | chr3_4:69782794-69782813 | None:intergenic | 30.0% | |
| TGCATGACAAGTTATATGTA+AGG | + | chr3_4:69782881-69782900 | Msa0518000:intron | 30.0% | |
| TTATATGTAAGGCAGCTATA+AGG | + | chr3_4:69782892-69782911 | Msa0518000:intron | 30.0% | |
| !! | ATTGTTTGATTTGAAGGCAA+AGG | + | chr3_4:69782969-69782988 | Msa0518000:intron | 30.0% |
| ATAGAGATACCATCGTTTAA+TGG | + | chr3_4:69783261-69783280 | Msa0518000:intron | 30.0% | |
| TTTAATGGCACTTGAAATAG+AGG | + | chr3_4:69783276-69783295 | Msa0518000:intron | 30.0% | |
| !! | ATCTTTTGTGTCACTAAACA+TGG | - | chr3_4:69783316-69783335 | None:intergenic | 30.0% |
| ACTTATTCTCTAGCAAATCA+TGG | - | chr3_4:69783470-69783489 | None:intergenic | 30.0% | |
| TTGCTAGAGAATAAGTTACT+AGG | + | chr3_4:69783474-69783493 | Msa0518000:intron | 30.0% | |
| CAATTTCAGCAAAAACATGA+AGG | - | chr3_4:69783649-69783668 | None:intergenic | 30.0% | |
| ATGCTTATGTTTACCTAGAA+TGG | + | chr3_4:69783676-69783695 | Msa0518000:intron | 30.0% | |
| GTAAATGTGTTTACCATTCT+AGG | - | chr3_4:69783692-69783711 | None:intergenic | 30.0% | |
| !! | GTTCTAACTTCAAAAGTACT+CGG | + | chr3_4:69783833-69783852 | Msa0518000:intron | 30.0% |
| !! | TTCTAACTTCAAAAGTACTC+GGG | + | chr3_4:69783834-69783853 | Msa0518000:intron | 30.0% |
| !! | AATCGATCCATTTTAGAGAA+CGG | + | chr3_4:69784194-69784213 | Msa0518000:CDS | 30.0% |
| ! | AGTTTTCTCACACTTACAAA+TGG | + | chr3_4:69784251-69784270 | Msa0518000:intron | 30.0% |
| ATCAAACTAGAACACAATGA+CGG | - | chr3_4:69784312-69784331 | None:intergenic | 30.0% | |
| !! | TATTTGTTTGTTTTCCTCTC+AGG | + | chr3_4:69784336-69784355 | Msa0518000:intron | 30.0% |
| CTTTGTATCTTCCTTAGTAA+GGG | - | chr3_4:69784362-69784381 | None:intergenic | 30.0% | |
| TCTTTGTATCTTCCTTAGTA+AGG | - | chr3_4:69784363-69784382 | None:intergenic | 30.0% | |
| GAATCATAAACGACCATTAA+GGG | - | chr3_4:69784430-69784449 | None:intergenic | 30.0% | |
| TGAATCATAAACGACCATTA+AGG | - | chr3_4:69784431-69784450 | None:intergenic | 30.0% | |
| TTACACTCATACCATAAAGT+TGG | + | chr3_4:69784472-69784491 | Msa0518000:intron | 30.0% | |
| TATAGCTACATTGCATATCA+AGG | - | chr3_4:69784537-69784556 | None:intergenic | 30.0% | |
| ACATTTATTGCTGAATACAC+TGG | + | chr3_4:69784589-69784608 | Msa0518000:CDS | 30.0% | |
| AATTAAAGGGATAGAACACT+GGG | + | chr3_4:69784799-69784818 | Msa0518000:intron | 30.0% | |
| !! | ATATAAAATGGACTGCAAGA+AGG | - | chr3_4:69784889-69784908 | None:intergenic | 30.0% |
| AACATGTCCAATTTATATGC+AGG | + | chr3_4:69785029-69785048 | Msa0518000:intron | 30.0% | |
| ACATGTCCAATTTATATGCA+GGG | + | chr3_4:69785030-69785049 | Msa0518000:intron | 30.0% | |
| TGTGTGAGATATGATGTTAA+TGG | + | chr3_4:69785079-69785098 | Msa0518000:CDS | 30.0% | |
| ATCATGAAAATTCTTTCCTG+AGG | - | chr3_4:69785269-69785288 | None:intergenic | 30.0% | |
| ! | AATTTCTTAAAGTGTTACCG+TGG | + | chr3_4:69785333-69785352 | Msa0518000:three_prime_UTR | 30.0% |
| ! | ATTTCTTAAAGTGTTACCGT+GGG | + | chr3_4:69785334-69785353 | Msa0518000:three_prime_UTR | 30.0% |
| ! | TGTATTTTACACCATATAGC+TGG | + | chr3_4:69785365-69785384 | Msa0518000:three_prime_UTR | 30.0% |
| TATGTGGCTTAGTAATTATG+TGG | + | chr3_4:69785394-69785413 | Msa0518000:three_prime_UTR | 30.0% | |
| ! | AAATGAAGAAGGTTTTCCTA+GGG | - | chr3_4:69785439-69785458 | None:intergenic | 30.0% |
| ! | TAAATGAAGAAGGTTTTCCT+AGG | - | chr3_4:69785440-69785459 | None:intergenic | 30.0% |
| CAGGACGATGACTAATATAA+TGG | + | chr3_4:69776976-69776995 | Msa0518000:intron | 35.0% | |
| GATGACTAATATAATGGCGA+GGG | + | chr3_4:69776982-69777001 | Msa0518000:CDS | 35.0% | |
| TAAATATGCAGTGGTTGAGA+AGG | + | chr3_4:69777006-69777025 | Msa0518000:CDS | 35.0% | |
| ! | GACGTTTTATGTGGAATCAT+GGG | + | chr3_4:69777387-69777406 | Msa0518000:intron | 35.0% |
| TAAACATACATGCATAGGGA+GGG | - | chr3_4:69777437-69777456 | None:intergenic | 35.0% | |
| TTAAACATACATGCATAGGG+AGG | - | chr3_4:69777438-69777457 | None:intergenic | 35.0% | |
| ACATATGGTGGCACAATTTA+TGG | + | chr3_4:69777960-69777979 | Msa0518000:intron | 35.0% | |
| GCAATACATGCATTGTTCAT+TGG | + | chr3_4:69778021-69778040 | Msa0518000:intron | 35.0% | |
| CCCTTGATTCAAACAAATGA+AGG | - | chr3_4:69778302-69778321 | None:intergenic | 35.0% | |
| TAAAAGCTCCAAAACAAGCA+TGG | - | chr3_4:69778349-69778368 | None:intergenic | 35.0% | |
| !! | CTTTTAAAGACCTCGTCTAT+TGG | + | chr3_4:69778363-69778382 | Msa0518000:intron | 35.0% |
| TCTTTGAATACCAAGCTAAC+TGG | + | chr3_4:69778419-69778438 | Msa0518000:intron | 35.0% | |
| ATATAGTTGTTAGGAAAGGG+TGG | + | chr3_4:69778459-69778478 | Msa0518000:intron | 35.0% | |
| AGATAGTTGTTCAGAAATGG+TGG | + | chr3_4:69778747-69778766 | Msa0518000:intron | 35.0% | |
| TTTGGAAATTGGAAAACAGG+TGG | + | chr3_4:69778837-69778856 | Msa0518000:intron | 35.0% | |
| ACACTAAAGTGATTCGTTGT+CGG | + | chr3_4:69779048-69779067 | Msa0518000:intron | 35.0% | |
| GAAAGTGGTGGTACAATTTA+TGG | + | chr3_4:69779171-69779190 | Msa0518000:intron | 35.0% | |
| TTGAGACAATTGTTCGGAAA+TGG | + | chr3_4:69779301-69779320 | Msa0518000:intron | 35.0% | |
| ACTTTAATGCGAGTCATAGT+CGG | + | chr3_4:69779338-69779357 | Msa0518000:intron | 35.0% | |
| GCAATGCATGTATTGTTCAT+TGG | + | chr3_4:69779377-69779396 | Msa0518000:intron | 35.0% | |
| GTTCATTGGAAATTGAGAAG+AGG | + | chr3_4:69779391-69779410 | Msa0518000:intron | 35.0% | |
| ATGATGTTGAGACAGTTGTT+TGG | + | chr3_4:69779764-69779783 | Msa0518000:intron | 35.0% | |
| TGAGACAGTTGTTTGGAAAA+AGG | + | chr3_4:69779771-69779790 | Msa0518000:intron | 35.0% | |
| AGTGAATAAATCAGGTGCTA+GGG | - | chr3_4:69780495-69780514 | None:intergenic | 35.0% | |
| AAGTGAATAAATCAGGTGCT+AGG | - | chr3_4:69780496-69780515 | None:intergenic | 35.0% | |
| TGTATGCAACATTTGTCTCT+AGG | - | chr3_4:69780538-69780557 | None:intergenic | 35.0% | |
| TCAAAGTTTGACATCAAACC+CGG | + | chr3_4:69781124-69781143 | Msa0518000:intron | 35.0% | |
| !!! | CCCGGCCATTTTTTTTTTTT+TGG | + | chr3_4:69781142-69781161 | Msa0518000:intron | 35.0% |
| !!! | TTTTGGGTTCATTCATGGAA+TGG | + | chr3_4:69781159-69781178 | Msa0518000:intron | 35.0% |
| GTTCATTCATGGAATGGAAA+CGG | + | chr3_4:69781165-69781184 | Msa0518000:intron | 35.0% | |
| !! | GAATGTTATGTTTGATGACG+TGG | - | chr3_4:69781268-69781287 | None:intergenic | 35.0% |
| GGTTGATTGTGAAATTCCAA+GGG | - | chr3_4:69781520-69781539 | None:intergenic | 35.0% | |
| ! | AGGTTGATTGTGAAATTCCA+AGG | - | chr3_4:69781521-69781540 | None:intergenic | 35.0% |
| ! | GATTAAGCTTGATAGCTTGA+TGG | - | chr3_4:69781591-69781610 | None:intergenic | 35.0% |
| ! | TTGAATTTTGTGAGGTGCAT+GGG | - | chr3_4:69781621-69781640 | None:intergenic | 35.0% |
| ! | TTTGAATTTTGTGAGGTGCA+TGG | - | chr3_4:69781622-69781641 | None:intergenic | 35.0% |
| ! | GTACATTGAATCTTGATTCG+TGG | + | chr3_4:69782361-69782380 | Msa0518000:intron | 35.0% |
| AAAGAAACATTGCCACAAAC+GGG | - | chr3_4:69782540-69782559 | None:intergenic | 35.0% | |
| !! | TTTCACTAGCTTGCAGATTT+TGG | + | chr3_4:69782920-69782939 | Msa0518000:intron | 35.0% |
| ATGACAATTGCTAAGCAGTT+AGG | - | chr3_4:69783010-69783029 | None:intergenic | 35.0% | |
| GCTATCTGTTAAGGTAATAC+TGG | - | chr3_4:69783224-69783243 | None:intergenic | 35.0% | |
| ATGGTATCTCTATTGTCAAG+TGG | - | chr3_4:69783254-69783273 | None:intergenic | 35.0% | |
| ! | TTTCAAGTGCCATTAAACGA+TGG | - | chr3_4:69783273-69783292 | None:intergenic | 35.0% |
| !! | CTTGAAATAGAGGCATCAAA+AGG | + | chr3_4:69783286-69783305 | Msa0518000:intron | 35.0% |
| !! | TGATTAAGTTGGAGTCTTCA+CGG | + | chr3_4:69783340-69783359 | Msa0518000:intron | 35.0% |
| CGGAACAAGAAGAATTGAAA+TGG | + | chr3_4:69783360-69783379 | Msa0518000:intron | 35.0% | |
| AGAAGAATTGAAATGGATGC+TGG | + | chr3_4:69783367-69783386 | Msa0518000:intron | 35.0% | |
| !!! | TTTTGGCTTACTAGGTGTAT+AGG | + | chr3_4:69783553-69783572 | Msa0518000:intron | 35.0% |
| ! | ATAGCATCTAAAGTCCAGAA+TGG | - | chr3_4:69783984-69784003 | None:intergenic | 35.0% |
| AGATATGCATGCTAATTAGC+CGG | - | chr3_4:69784289-69784308 | None:intergenic | 35.0% | |
| ! | CATAGCTATGCAGTGTTTTA+AGG | - | chr3_4:69784386-69784405 | None:intergenic | 35.0% |
| TCGTTTATGATTCATGCCAA+GGG | + | chr3_4:69784437-69784456 | Msa0518000:CDS | 35.0% | |
| TATGCAATGTAGCTATACTG+TGG | + | chr3_4:69784540-69784559 | Msa0518000:intron | 35.0% | |
| TAACATGCAATAAGTGAGAC+AGG | - | chr3_4:69784773-69784792 | None:intergenic | 35.0% | |
| GAATTAAAGGGATAGAACAC+TGG | + | chr3_4:69784798-69784817 | Msa0518000:intron | 35.0% | |
| ATTAAAGGGATAGAACACTG+GGG | + | chr3_4:69784800-69784819 | Msa0518000:intron | 35.0% | |
| AATGGTATGCCACAGAAAAA+TGG | - | chr3_4:69784839-69784858 | None:intergenic | 35.0% | |
| ATGATGTTAATGGTGAAAGC+CGG | + | chr3_4:69785089-69785108 | Msa0518000:CDS | 35.0% | |
| CTCAGACAAAATGATGAGTT+GGG | - | chr3_4:69785192-69785211 | None:intergenic | 35.0% | |
| CTTTCCTGAGGTCTAAAAAT+TGG | - | chr3_4:69785257-69785276 | None:intergenic | 35.0% | |
| ACATAATTAGGCCAGCTATA+TGG | - | chr3_4:69785379-69785398 | None:intergenic | 35.0% | |
| ! | ATATAGCTGGCCTAATTATG+TGG | + | chr3_4:69785378-69785397 | Msa0518000:three_prime_UTR | 35.0% |
| !! | TGAAGTTGGTTAGCTTACGA+GGG | - | chr3_4:69776886-69776905 | None:intergenic | 40.0% |
| !! | AGTCTGTTGGCTTCTTCTTT+CGG | - | chr3_4:69776934-69776953 | None:intergenic | 40.0% |
| CGATGACTAATATAATGGCG+AGG | + | chr3_4:69776981-69777000 | Msa0518000:CDS | 40.0% | |
| TTGTGTGACAAATGCGACAA+AGG | + | chr3_4:69777091-69777110 | Msa0518000:CDS | 40.0% | |
| ! | TCATATGAAGTGTCTGAGAC+CGG | + | chr3_4:69777117-69777136 | Msa0518000:CDS | 40.0% |
| !! | CTAGAGTTCCTATTGGTTCA+TGG | + | chr3_4:69777146-69777165 | Msa0518000:CDS | 40.0% |
| AACCACTAGACTGTAACAAC+AGG | - | chr3_4:69777357-69777376 | None:intergenic | 40.0% | |
| GTTGTTACAGTCTAGTGGTT+TGG | + | chr3_4:69777357-69777376 | Msa0518000:intron | 40.0% | |
| ! | GGACGTTTTATGTGGAATCA+TGG | + | chr3_4:69777386-69777405 | Msa0518000:intron | 40.0% |
| AAACATACATGCATAGGGAG+GGG | - | chr3_4:69777436-69777455 | None:intergenic | 40.0% | |
| TCACTAACGGTTATGCATCA+GGG | - | chr3_4:69777612-69777631 | None:intergenic | 40.0% | |
| TTCACTAACGGTTATGCATC+AGG | - | chr3_4:69777613-69777632 | None:intergenic | 40.0% | |
| GAAAAGGGTGGCGTAATTTA+TGG | + | chr3_4:69777786-69777805 | Msa0518000:intron | 40.0% | |
| TGCAAAACAACCAATAGACG+AGG | - | chr3_4:69778376-69778395 | None:intergenic | 40.0% | |
| GGAAAGGGTGACACAATTTA+TGG | + | chr3_4:69778615-69778634 | Msa0518000:intron | 40.0% | |
| CTTTAATGCGAGTCATAGTC+GGG | + | chr3_4:69779339-69779358 | Msa0518000:intron | 40.0% | |
| AAATGGCATACATGTTCTCG+TGG | + | chr3_4:69780420-69780439 | Msa0518000:intron | 40.0% | |
| GTGAATAAATCAGGTGCTAG+GGG | - | chr3_4:69780494-69780513 | None:intergenic | 40.0% | |
| !! | TTTGATGACGTGGAATGTTC+TGG | - | chr3_4:69781258-69781277 | None:intergenic | 40.0% |
| CAAATTCTCAATTCCACCCT+TGG | + | chr3_4:69781501-69781520 | Msa0518000:intron | 40.0% | |
| TGATTGTGAAATTCCAAGGG+TGG | - | chr3_4:69781517-69781536 | None:intergenic | 40.0% | |
| ! | CTTGATAGCTTGATGGAAGA+CGG | - | chr3_4:69781584-69781603 | None:intergenic | 40.0% |
| ATATAAGAGGGCTGAGTACA+CGG | + | chr3_4:69781718-69781737 | Msa0518000:intron | 40.0% | |
| ATCGGAACTCGAACAACAAT+TGG | - | chr3_4:69781866-69781885 | None:intergenic | 40.0% | |
| ! | ATTGTTGTTCGAGTTCCGAT+TGG | + | chr3_4:69781866-69781885 | Msa0518000:CDS | 40.0% |
| ACCTTGACATCAGAACACTT+GGG | - | chr3_4:69781905-69781924 | None:intergenic | 40.0% | |
| AACAATCGTGCTTCTTCTCA+GGG | + | chr3_4:69782111-69782130 | Msa0518000:CDS | 40.0% | |
| !! | TTGGCTTTGTGAAAGTGATG+TGG | + | chr3_4:69782301-69782320 | Msa0518000:intron | 40.0% |
| ACAAACGGGCAACTTTCATA+AGG | - | chr3_4:69782526-69782545 | None:intergenic | 40.0% | |
| TTATGAAAGTTGCCCGTTTG+TGG | + | chr3_4:69782525-69782544 | Msa0518000:intron | 40.0% | |
| AAATTTGTGGAGCCTGATGA+TGG | - | chr3_4:69782596-69782615 | None:intergenic | 40.0% | |
| GTTGCAATGGCGTGTTTATA+TGG | - | chr3_4:69782701-69782720 | None:intergenic | 40.0% | |
| ACCAATTTGTGAAGGAATGC+CGG | - | chr3_4:69782742-69782761 | None:intergenic | 40.0% | |
| CCACCATAACCAATTTGTGA+AGG | - | chr3_4:69782750-69782769 | None:intergenic | 40.0% | |
| CCTTCACAAATTGGTTATGG+TGG | + | chr3_4:69782747-69782766 | Msa0518000:intron | 40.0% | |
| !! | GTTTGATTTGAAGGCAAAGG+AGG | + | chr3_4:69782972-69782991 | Msa0518000:intron | 40.0% |
| TAAGCAGTTAGGCGTTTGAT+CGG | - | chr3_4:69782999-69783018 | None:intergenic | 40.0% | |
| GGTTCTTGAGCTATCTGTTA+AGG | - | chr3_4:69783233-69783252 | None:intergenic | 40.0% | |
| CTTTAGATGCTATGAAGCGT+CGG | + | chr3_4:69783991-69784010 | Msa0518000:intron | 40.0% | |
| TGGTACAGAAGAAAAGGAGA+AGG | + | chr3_4:69784033-69784052 | Msa0518000:CDS | 40.0% | |
| GGATCTTCTGTAGGAACAAA+TGG | - | chr3_4:69784065-69784084 | None:intergenic | 40.0% | |
| TTCCTACAGAAGATCCTGAT+AGG | + | chr3_4:69784069-69784088 | Msa0518000:CDS | 40.0% | |
| TGCTGTTAAAGCAGTAGCAA+GGG | - | chr3_4:69784114-69784133 | None:intergenic | 40.0% | |
| ATGCTGTTAAAGCAGTAGCA+AGG | - | chr3_4:69784115-69784134 | None:intergenic | 40.0% | |
| TGCTACTGCTTTAACAGCAT+TGG | + | chr3_4:69784115-69784134 | Msa0518000:CDS | 40.0% | |
| AATAAGCTGACGTACTTTCC+AGG | + | chr3_4:69784152-69784171 | Msa0518000:CDS | 40.0% | |
| ATGGATCGATTAGCAGATCT+AGG | - | chr3_4:69784185-69784204 | None:intergenic | 40.0% | |
| ! | CAAATGGACCTTTTGCAAAC+CGG | + | chr3_4:69784267-69784286 | Msa0518000:intron | 40.0% |
| !! | CTAATTAGCCGGTTTGCAAA+AGG | - | chr3_4:69784278-69784297 | None:intergenic | 40.0% |
| TGCATAGCTATGACTAAACG+AGG | + | chr3_4:69784394-69784413 | Msa0518000:CDS | 40.0% | |
| CATAAACGACCATTAAGGGA+GGG | - | chr3_4:69784426-69784445 | None:intergenic | 40.0% | |
| TCATAAACGACCATTAAGGG+AGG | - | chr3_4:69784427-69784446 | None:intergenic | 40.0% | |
| GTCGTTTATGATTCATGCCA+AGG | + | chr3_4:69784436-69784455 | Msa0518000:CDS | 40.0% | |
| GTAAGATGAGTATGTACCCT+TGG | - | chr3_4:69784456-69784475 | None:intergenic | 40.0% | |
| ! | GTTATCTGTGCTGATAAACG+TGG | + | chr3_4:69784700-69784719 | Msa0518000:CDS | 40.0% |
| TTAAAGGGATAGAACACTGG+GGG | + | chr3_4:69784801-69784820 | Msa0518000:intron | 40.0% | |
| !! | TGTGAACGACCATTTTTCTG+TGG | + | chr3_4:69784827-69784846 | Msa0518000:intron | 40.0% |
| GTCCAATTTATATGCAGGGA+AGG | + | chr3_4:69785034-69785053 | Msa0518000:intron | 40.0% | |
| TGCCTTCCCTGCATATAAAT+TGG | - | chr3_4:69785039-69785058 | None:intergenic | 40.0% | |
| AATTTATATGCAGGGAAGGC+AGG | + | chr3_4:69785038-69785057 | Msa0518000:intron | 40.0% | |
| TGATGTTAATGGTGAAAGCC+GGG | + | chr3_4:69785090-69785109 | Msa0518000:CDS | 40.0% | |
| TGCTACTCGAGATATTTCCA+AGG | + | chr3_4:69785123-69785142 | Msa0518000:CDS | 40.0% | |
| GCTACTCGAGATATTTCCAA+GGG | + | chr3_4:69785124-69785143 | Msa0518000:CDS | 40.0% | |
| CTACTCGAGATATTTCCAAG+GGG | + | chr3_4:69785125-69785144 | Msa0518000:CDS | 40.0% | |
| TACTCGAGATATTTCCAAGG+GGG | + | chr3_4:69785126-69785145 | Msa0518000:CDS | 40.0% | |
| GCTCAGACAAAATGATGAGT+TGG | - | chr3_4:69785193-69785212 | None:intergenic | 40.0% | |
| !! | AGGACCAATTTTTAGACCTC+AGG | + | chr3_4:69785250-69785269 | Msa0518000:three_prime_UTR | 40.0% |
| AAAATACAACGAGTTGCCCA+CGG | - | chr3_4:69785353-69785372 | None:intergenic | 40.0% | |
| AGAGATGAATAGAGAACCCT+AGG | + | chr3_4:69785420-69785439 | Msa0518000:three_prime_UTR | 40.0% | |
| !! | AAGTTGGTTAGCTTACGAGG+GGG | - | chr3_4:69776884-69776903 | None:intergenic | 45.0% |
| !! | GAAGTTGGTTAGCTTACGAG+GGG | - | chr3_4:69776885-69776904 | None:intergenic | 45.0% |
| !! | GTGAAGTTGGTTAGCTTACG+AGG | - | chr3_4:69776887-69776906 | None:intergenic | 45.0% |
| ATATGCAGTGGTTGAGAAGG+AGG | + | chr3_4:69777009-69777028 | Msa0518000:CDS | 45.0% | |
| TCACACAACAAAAGCTCCTC+AGG | - | chr3_4:69777079-69777098 | None:intergenic | 45.0% | |
| ATAGGAACTCTAGCCAGAAC+CGG | - | chr3_4:69777139-69777158 | None:intergenic | 45.0% | |
| ! | GTTCTGGCTAGAGTTCCTAT+TGG | + | chr3_4:69777139-69777158 | Msa0518000:CDS | 45.0% |
| GGGCAAATCCATGAACCAAT+AGG | - | chr3_4:69777157-69777176 | None:intergenic | 45.0% | |
| TCCAGCTCAGAACAACACTT+GGG | - | chr3_4:69777178-69777197 | None:intergenic | 45.0% | |
| GTCCTGTTGTTACAGTCTAG+TGG | + | chr3_4:69777352-69777371 | Msa0518000:intron | 45.0% | |
| !! | AGTCTAGTGGTTTGGTTGTG+AGG | + | chr3_4:69777365-69777384 | Msa0518000:intron | 45.0% |
| ! | GGTTGTGAGGACGTTTTATG+TGG | + | chr3_4:69777378-69777397 | Msa0518000:intron | 45.0% |
| TGGAATCATGGGTTCAAACC+TGG | + | chr3_4:69777398-69777417 | Msa0518000:intron | 45.0% | |
| GGAATCATGGGTTCAAACCT+GGG | + | chr3_4:69777399-69777418 | Msa0518000:intron | 45.0% | |
| AACATACATGCATAGGGAGG+GGG | - | chr3_4:69777435-69777454 | None:intergenic | 45.0% | |
| TTAAGTACGTGTCAGTCACC+AGG | + | chr3_4:69777454-69777473 | Msa0518000:intron | 45.0% | |
| TTATGTGGCACCAGTTAGCT+TGG | - | chr3_4:69778432-69778451 | None:intergenic | 45.0% | |
| TTTATGCGTGCGCATTGTTC+TGG | - | chr3_4:69781197-69781216 | None:intergenic | 45.0% | |
| TTGGTTATGCTAACGTGCAC+CGG | - | chr3_4:69781235-69781254 | None:intergenic | 45.0% | |
| ATGACGTGGAATGTTCTGGT+TGG | - | chr3_4:69781254-69781273 | None:intergenic | 45.0% | |
| CACAATCAACCTCACCTGAA+TGG | + | chr3_4:69781529-69781548 | Msa0518000:intron | 45.0% | |
| TCACATAAAAGCAGCTCCTC+CGG | - | chr3_4:69781806-69781825 | None:intergenic | 45.0% | |
| CCTTGACATCAGAACACTTG+GGG | - | chr3_4:69781904-69781923 | None:intergenic | 45.0% | |
| GACCTTGACATCAGAACACT+TGG | - | chr3_4:69781906-69781925 | None:intergenic | 45.0% | |
| CGTAGGGATTCTCTTGATTC+CGG | + | chr3_4:69782087-69782106 | Msa0518000:CDS | 45.0% | |
| GTAGGGATTCTCTTGATTCC+GGG | + | chr3_4:69782088-69782107 | Msa0518000:CDS | 45.0% | |
| ! | AGAAGAAGCACGATTGTTCC+CGG | - | chr3_4:69782109-69782128 | None:intergenic | 45.0% |
| GAACAATCGTGCTTCTTCTC+AGG | + | chr3_4:69782110-69782129 | Msa0518000:CDS | 45.0% | |
| GAGTTGAGTAATGCTGTCGA+TGG | + | chr3_4:69782657-69782676 | Msa0518000:intron | 45.0% | |
| TTGAGTAATGCTGTCGATGG+CGG | + | chr3_4:69782660-69782679 | Msa0518000:intron | 45.0% | |
| GCAATGGCGTGTTTATATGG+CGG | - | chr3_4:69782698-69782717 | None:intergenic | 45.0% | |
| AAACACGCCATTGCAACCTA+AGG | + | chr3_4:69782704-69782723 | Msa0518000:intron | 45.0% | |
| ATCGCAAAAATAGGAGGCCA+TGG | - | chr3_4:69782788-69782807 | None:intergenic | 45.0% | |
| !! | CTTGCAGATTTTGGTGCAAC+TGG | + | chr3_4:69782929-69782948 | Msa0518000:intron | 45.0% |
| AAGCAGTTAGGCGTTTGATC+GGG | - | chr3_4:69782998-69783017 | None:intergenic | 45.0% | |
| ! | TTGTGGGGATTCTAGCTATG+TGG | + | chr3_4:69783096-69783115 | Msa0518000:intron | 45.0% |
| ! | CTTTTCTTCTGTACCACCAG+AGG | - | chr3_4:69784029-69784048 | None:intergenic | 45.0% |
| CTCTGGTGGTACAGAAGAAA+AGG | + | chr3_4:69784027-69784046 | Msa0518000:CDS | 45.0% | |
| CTCCTATCAGGATCTTCTGT+AGG | - | chr3_4:69784074-69784093 | None:intergenic | 45.0% | |
| CTACAGAAGATCCTGATAGG+AGG | + | chr3_4:69784072-69784091 | Msa0518000:CDS | 45.0% | |
| ATTTGCTTCAGCCTCCTATC+AGG | - | chr3_4:69784086-69784105 | None:intergenic | 45.0% | |
| TGATAGGAGGCTGAAGCAAA+TGG | + | chr3_4:69784085-69784104 | Msa0518000:CDS | 45.0% | |
| !! | CGATCCATTTTAGAGAACGG+TGG | + | chr3_4:69784197-69784216 | Msa0518000:CDS | 45.0% |
| ! | CATGCCACCGTTCTCTAAAA+TGG | - | chr3_4:69784204-69784223 | None:intergenic | 45.0% |
| GCAATGTAGCTATACTGTGG+AGG | + | chr3_4:69784543-69784562 | Msa0518000:intron | 45.0% | |
| AACATTGCTCGCTTCATCAG+TGG | + | chr3_4:69784724-69784743 | Msa0518000:CDS | 45.0% | |
| GAGTAGCAACCAATAAGACC+CGG | - | chr3_4:69785111-69785130 | None:intergenic | 45.0% | |
| ATAATAAAGCCTCTCCCCCT+TGG | - | chr3_4:69785143-69785162 | None:intergenic | 45.0% | |
| !!! | ATATATTTTATTTTCATTAT+TGG | - | chr3_4:69777480-69777499 | None:intergenic | 5.0% |
| !! | ATTGTAAAAAAATTATAAAT+TGG | + | chr3_4:69780839-69780858 | Msa0518000:intron | 5.0% |
| !! | TTGTAAAAAAATTATAAATT+GGG | + | chr3_4:69780840-69780859 | Msa0518000:intron | 5.0% |
| !! | CTGTTGGCTTCTTCTTTCGG+TGG | - | chr3_4:69776931-69776950 | None:intergenic | 50.0% |
| ATGTGTGAGCGATGTGGATC+TGG | + | chr3_4:69777046-69777065 | Msa0518000:CDS | 50.0% | |
| TGGATCTGGTGAACAACCTG+AGG | + | chr3_4:69777060-69777079 | Msa0518000:CDS | 50.0% | |
| CCAGCTCAGAACAACACTTG+GGG | - | chr3_4:69777177-69777196 | None:intergenic | 50.0% | |
| CTCCAGCTCAGAACAACACT+TGG | - | chr3_4:69777179-69777198 | None:intergenic | 50.0% | |
| ! | GCTCGTGACCATGCTTGTTT+TGG | + | chr3_4:69778338-69778357 | Msa0518000:intron | 50.0% |
| TTACGTTACTCTCTCACCCG+CGG | - | chr3_4:69781312-69781331 | None:intergenic | 50.0% | |
| ! | TTTTGTGAGGTGCATGGGTG+CGG | - | chr3_4:69781616-69781635 | None:intergenic | 50.0% |
| ACCTCCTGTGTGAGCAATGT+GGG | + | chr3_4:69781768-69781787 | Msa0518000:CDS | 50.0% | |
| GAACACTTGGGGCAAATCCA+CGG | - | chr3_4:69781893-69781912 | None:intergenic | 50.0% | |
| CCCCAAGTGTTCTGATGTCA+AGG | + | chr3_4:69781901-69781920 | Msa0518000:CDS | 50.0% | |
| TCCATTTCTTCGGGCTTCGT+AGG | + | chr3_4:69782070-69782089 | Msa0518000:CDS | 50.0% | |
| CCATTTCTTCGGGCTTCGTA+GGG | + | chr3_4:69782071-69782090 | Msa0518000:CDS | 50.0% | |
| TGTGAAGGAATGCCGGCAAA+TGG | - | chr3_4:69782735-69782754 | None:intergenic | 50.0% | |
| GCCGGCATTCCTTCACAAAT+TGG | + | chr3_4:69782738-69782757 | Msa0518000:intron | 50.0% | |
| GGTTACCGAAAAATCCGCCA+TGG | + | chr3_4:69782768-69782787 | Msa0518000:intron | 50.0% | |
| GCAAAAATAGGAGGCCATGG+CGG | - | chr3_4:69782785-69782804 | None:intergenic | 50.0% | |
| TTCTGTACCACCAGAGGTCT+TGG | - | chr3_4:69784023-69784042 | None:intergenic | 50.0% | |
| GCTGACGTACTTTCCAGGAA+TGG | + | chr3_4:69784157-69784176 | Msa0518000:CDS | 50.0% | |
| TTTAGAGAACGGTGGCATGC+AGG | + | chr3_4:69784205-69784224 | Msa0518000:CDS | 50.0% | |
| TTCCTCTCAGGCCCTTACTA+AGG | + | chr3_4:69784348-69784367 | Msa0518000:intron | 50.0% | |
| TTCCTTAGTAAGGGCCTGAG+AGG | - | chr3_4:69784353-69784372 | None:intergenic | 50.0% | |
| AGGCCAATTCCCTCCCTTAA+TGG | + | chr3_4:69784414-69784433 | Msa0518000:CDS | 50.0% | |
| CGACCATTAAGGGAGGGAAT+TGG | - | chr3_4:69784420-69784439 | None:intergenic | 50.0% | |
| ! | TGGTGAAAGCCGGGTCTTAT+TGG | + | chr3_4:69785099-69785118 | Msa0518000:CDS | 50.0% |
| GAGATATTTCCAAGGGGGAG+AGG | + | chr3_4:69785131-69785150 | Msa0518000:CDS | 50.0% | |
| !! | TTGGTTAGCTTACGAGGGGG+AGG | - | chr3_4:69776881-69776900 | None:intergenic | 55.0% |
| ATGTGTGCGGCTGGTGAAGT+TGG | - | chr3_4:69776900-69776919 | None:intergenic | 55.0% | |
| GGCTTCTTCTTTCGGTGGCA+TGG | - | chr3_4:69776926-69776945 | None:intergenic | 55.0% | |
| AGCCAACAGACTCGTCATCG+CGG | + | chr3_4:69776942-69776961 | Msa0518000:CDS | 55.0% | |
| GGCGAGGGCTAAATATGCAG+TGG | + | chr3_4:69776997-69777016 | Msa0518000:CDS | 55.0% | |
| GACTGCATGTGTGAGCGATG+TGG | + | chr3_4:69777040-69777059 | Msa0518000:CDS | 55.0% | |
| ! | GAAGTGTCTGAGACCGGTTC+TGG | + | chr3_4:69777123-69777142 | Msa0518000:CDS | 55.0% |
| ! | CCCCAAGTGTTGTTCTGAGC+TGG | + | chr3_4:69777174-69777193 | Msa0518000:CDS | 55.0% |
| ATGCATAGGGAGGGGGAATG+TGG | - | chr3_4:69777428-69777447 | None:intergenic | 55.0% | |
| CGGGAGAGTGAGACACTTAC+CGG | - | chr3_4:69781292-69781311 | None:intergenic | 55.0% | |
| GTAAGTGTCTCACTCTCCCG+CGG | + | chr3_4:69781292-69781311 | Msa0518000:intron | 55.0% | |
| TAAGTGTCTCACTCTCCCGC+GGG | + | chr3_4:69781293-69781312 | Msa0518000:intron | 55.0% | |
| TACGTTACTCTCTCACCCGC+GGG | - | chr3_4:69781311-69781330 | None:intergenic | 55.0% | |
| CAACCTCACCTGAATGGCTC+CGG | + | chr3_4:69781535-69781554 | Msa0518000:intron | 55.0% | |
| AGCTTGATGGAAGACGGCGA+TGG | - | chr3_4:69781578-69781597 | None:intergenic | 55.0% | |
| TAAGAGGGCTGAGTACACGG+TGG | + | chr3_4:69781721-69781740 | Msa0518000:intron | 55.0% | |
| GCTGAGGAGGAGGAGGATTA+CGG | + | chr3_4:69781743-69781762 | Msa0518000:CDS | 55.0% | |
| GACCTCCTGTGTGAGCAATG+TGG | + | chr3_4:69781767-69781786 | Msa0518000:CDS | 55.0% | |
| ACCCACATTGCTCACACAGG+AGG | - | chr3_4:69781772-69781791 | None:intergenic | 55.0% | |
| CTGTGTGAGCAATGTGGGTC+CGG | + | chr3_4:69781773-69781792 | Msa0518000:CDS | 55.0% | |
| ATGTGGGTCCGGTGAACAAC+CGG | + | chr3_4:69781784-69781803 | Msa0518000:CDS | 55.0% | |
| ! | TTCGAGTTCCGATTGGTCCG+TGG | + | chr3_4:69781873-69781892 | Msa0518000:CDS | 55.0% |
| GGGCAAATCCACGGACCAAT+CGG | - | chr3_4:69781884-69781903 | None:intergenic | 55.0% | |
| CCCTACGAAGCCCGAAGAAA+TGG | - | chr3_4:69782074-69782093 | None:intergenic | 55.0% | |
| !! | GTAATGCTGTCGATGGCGGA+AGG | + | chr3_4:69782664-69782683 | Msa0518000:intron | 55.0% |
| GAAGGAATGCCGGCAAATGG+TGG | - | chr3_4:69782732-69782751 | None:intergenic | 55.0% | |
| !!! | GGAGGCCATGGCGGATTTTT+CGG | - | chr3_4:69782776-69782795 | None:intergenic | 55.0% |
| GCAGATCTAGGAGCCATTCC+TGG | - | chr3_4:69784173-69784192 | None:intergenic | 55.0% | |
| ! | GTTAGCTTACGAGGGGGAGG+TGG | - | chr3_4:69776878-69776897 | None:intergenic | 60.0% |
| GGTGGCATGGTGCATGTGTG+CGG | - | chr3_4:69776913-69776932 | None:intergenic | 60.0% | |
| GCCAACAGACTCGTCATCGC+GGG | + | chr3_4:69776943-69776962 | Msa0518000:CDS | 60.0% | |
| ACCCGCGATGACGAGTCTGT+TGG | - | chr3_4:69776947-69776966 | None:intergenic | 60.0% | |
| CATCGCGGGTGACGAAGTAC+AGG | + | chr3_4:69776957-69776976 | Msa0518000:intron | 60.0% | |
| CTCGAAGGTGGAGGAAGAGG+AGG | - | chr3_4:69781660-69781679 | None:intergenic | 60.0% | |
| CTCCTCTTCCTCCACCTTCG+AGG | + | chr3_4:69781658-69781677 | Msa0518000:CDS | 60.0% | |
| CTCCTCGAAGGTGGAGGAAG+AGG | - | chr3_4:69781663-69781682 | None:intergenic | 60.0% | |
| CTCTTCCTCCACCTTCGAGG+AGG | + | chr3_4:69781661-69781680 | Msa0518000:CDS | 60.0% | |
| TTCCTCCACCTTCGAGGAGG+AGG | + | chr3_4:69781664-69781683 | Msa0518000:CDS | 60.0% | |
| TCCACCTTCGAGGAGGAGGA+GGG | + | chr3_4:69781668-69781687 | Msa0518000:CDS | 60.0% | |
| ATTCCCCTCCTCCTCCTCGA+AGG | - | chr3_4:69781675-69781694 | None:intergenic | 60.0% | |
| TGAGTACACGGTGGCTGAGG+AGG | + | chr3_4:69781730-69781749 | Msa0518000:CDS | 60.0% | |
| CGGACCCACATTGCTCACAC+AGG | - | chr3_4:69781775-69781794 | None:intergenic | 60.0% | |
| CAGCTCCTCCGGTTGTTCAC+CGG | - | chr3_4:69781795-69781814 | None:intergenic | 60.0% | |
| ! | GGTGGCGCCTTAGGTTGCAA+TGG | - | chr3_4:69782714-69782733 | None:intergenic | 60.0% |
| ! | CCTAAGGCGCCACCATTTGC+CGG | + | chr3_4:69782720-69782739 | Msa0518000:intron | 60.0% |
| TCGGAGACGTCCAAGACCTC+TGG | + | chr3_4:69784010-69784029 | Msa0518000:CDS | 60.0% | |
| GAGACGTCCAAGACCTCTGG+TGG | + | chr3_4:69784013-69784032 | Msa0518000:CDS | 60.0% | |
| GCATGGTGCATGTGTGCGGC+TGG | - | chr3_4:69776909-69776928 | None:intergenic | 65.0% | |
| GAGGGGGAATGTGGTGACCC+AGG | - | chr3_4:69777419-69777438 | None:intergenic | 65.0% | |
| TCGCCGGAGCCATTCAGGTG+AGG | - | chr3_4:69781541-69781560 | None:intergenic | 65.0% | |
| AGCTGTCGCCGGAGCCATTC+AGG | - | chr3_4:69781546-69781565 | None:intergenic | 65.0% | |
| AATGGCTCCGGCGACAGCTC+CGG | + | chr3_4:69781547-69781566 | Msa0518000:intron | 65.0% | |
| GAAGACGGCGATGGAGACGC+CGG | - | chr3_4:69781569-69781588 | None:intergenic | 65.0% | |
| TGTGAGGTGCATGGGTGCGG+CGG | - | chr3_4:69781613-69781632 | None:intergenic | 65.0% | |
| CTCCTCCTCCTCGAAGGTGG+AGG | - | chr3_4:69781669-69781688 | None:intergenic | 65.0% | |
| CTCCACCTTCGAGGAGGAGG+AGG | + | chr3_4:69781667-69781686 | Msa0518000:CDS | 65.0% | |
| CCACCTTCGAGGAGGAGGAG+GGG | + | chr3_4:69781669-69781688 | Msa0518000:CDS | 65.0% | |
| GGCTGAGTACACGGTGGCTG+AGG | + | chr3_4:69781727-69781746 | Msa0518000:CDS | 65.0% | |
| GTACACGGTGGCTGAGGAGG+AGG | + | chr3_4:69781733-69781752 | Msa0518000:CDS | 65.0% | |
| TGGGTCCGGTGAACAACCGG+AGG | + | chr3_4:69781787-69781806 | Msa0518000:CDS | 65.0% | |
| ! | CCGGCAAATGGTGGCGCCTT+AGG | - | chr3_4:69782723-69782742 | None:intergenic | 65.0% |
| CTTACGAGGGGGAGGTGGCG+AGG | - | chr3_4:69776873-69776892 | None:intergenic | 70.0% | |
| CCCCTCCTCCTCCTCGAAGG+TGG | - | chr3_4:69781672-69781691 | None:intergenic | 70.0% | |
| CACGGTGGCTGAGGAGGAGG+AGG | + | chr3_4:69781736-69781755 | Msa0518000:CDS | 70.0% | |
| GGAGACGCCGGAGCTGTCGC+CGG | - | chr3_4:69781557-69781576 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 69776838 | 69785548 | 69776838 | ID=Msa0518000;Name=Msa0518000 |
| chr3_4 | mRNA | 69776838 | 69785548 | 69776838 | ID=Msa0518000-mRNA-1;Parent=Msa0518000;Name=Msa0518000-mRNA-1;_AED=0.06;_eAED=0.06;_QI=25|0.62|0.55|1|0.62|0.55|9|338|495 |
| chr3_4 | exon | 69776838 | 69776972 | 69776838 | ID=Msa0518000-mRNA-1:exon:18642;Parent=Msa0518000-mRNA-1 |
| chr3_4 | exon | 69776979 | 69777208 | 69776979 | ID=Msa0518000-mRNA-1:exon:18643;Parent=Msa0518000-mRNA-1 |
| chr3_4 | exon | 69781564 | 69781709 | 69781564 | ID=Msa0518000-mRNA-1:exon:18644;Parent=Msa0518000-mRNA-1 |
| chr3_4 | exon | 69781725 | 69781938 | 69781725 | ID=Msa0518000-mRNA-1:exon:18645;Parent=Msa0518000-mRNA-1 |
| chr3_4 | exon | 69782049 | 69782132 | 69782049 | ID=Msa0518000-mRNA-1:exon:18646;Parent=Msa0518000-mRNA-1 |
| chr3_4 | exon | 69783997 | 69784226 | 69783997 | ID=Msa0518000-mRNA-1:exon:18647;Parent=Msa0518000-mRNA-1 |
| chr3_4 | exon | 69784358 | 69784458 | 69784358 | ID=Msa0518000-mRNA-1:exon:18648;Parent=Msa0518000-mRNA-1 |
| chr3_4 | exon | 69784552 | 69784764 | 69784552 | ID=Msa0518000-mRNA-1:exon:18649;Parent=Msa0518000-mRNA-1 |
| chr3_4 | exon | 69785051 | 69785548 | 69785051 | ID=Msa0518000-mRNA-1:exon:18650;Parent=Msa0518000-mRNA-1 |
| chr3_4 | five_prime_UTR | 69776838 | 69776862 | 69776838 | ID=Msa0518000-mRNA-1:five_prime_utr;Parent=Msa0518000-mRNA-1 |
| chr3_4 | CDS | 69776863 | 69776972 | 69776863 | ID=Msa0518000-mRNA-1:cds;Parent=Msa0518000-mRNA-1 |
| chr3_4 | CDS | 69776979 | 69777208 | 69776979 | ID=Msa0518000-mRNA-1:cds;Parent=Msa0518000-mRNA-1 |
| chr3_4 | CDS | 69781564 | 69781709 | 69781564 | ID=Msa0518000-mRNA-1:cds;Parent=Msa0518000-mRNA-1 |
| chr3_4 | CDS | 69781725 | 69781938 | 69781725 | ID=Msa0518000-mRNA-1:cds;Parent=Msa0518000-mRNA-1 |
| chr3_4 | CDS | 69782049 | 69782132 | 69782049 | ID=Msa0518000-mRNA-1:cds;Parent=Msa0518000-mRNA-1 |
| chr3_4 | CDS | 69783997 | 69784226 | 69783997 | ID=Msa0518000-mRNA-1:cds;Parent=Msa0518000-mRNA-1 |
| chr3_4 | CDS | 69784358 | 69784458 | 69784358 | ID=Msa0518000-mRNA-1:cds;Parent=Msa0518000-mRNA-1 |
| chr3_4 | CDS | 69784552 | 69784764 | 69784552 | ID=Msa0518000-mRNA-1:cds;Parent=Msa0518000-mRNA-1 |
| chr3_4 | CDS | 69785051 | 69785210 | 69785051 | ID=Msa0518000-mRNA-1:cds;Parent=Msa0518000-mRNA-1 |
| chr3_4 | three_prime_UTR | 69785211 | 69785548 | 69785211 | ID=Msa0518000-mRNA-1:three_prime_utr;Parent=Msa0518000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
