AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0519400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0519400 MtrunA17_Chr3g0134821 94.559 827 45 0 632 1458 12 838 0.0 1554
Msa0519400 MtrunA17_Chr3g0134821 53.979 578 187 11 95 632 263 801 4.00e-168 526
Msa0519400 MtrunA17_Chr3g0134821 71.324 136 27 2 1 124 1 136 2.50e-49 190
Msa0519400 MtrunA17_Chr7g0270101 60.719 835 267 9 634 1460 14 795 0.0 954
Msa0519400 MtrunA17_Chr7g0270101 65.272 478 90 7 189 632 321 756 0.0 603
Msa0519400 MtrunA17_Chr7g0270101 62.500 144 38 4 1 131 1 141 7.58e-42 166
Msa0519400 MtrunA17_Chr3g0134811 85.773 485 28 6 189 632 276 760 0.0 832
Msa0519400 MtrunA17_Chr3g0134811 57.003 714 188 7 855 1460 97 799 0.0 719
Msa0519400 MtrunA17_Chr3g0134811 73.558 208 47 3 634 841 14 213 1.83e-79 280
Msa0519400 MtrunA17_Chr3g0134811 63.874 191 60 2 1 182 1 191 1.49e-64 236
Msa0519400 MtrunA17_Chr5g0407211 66.819 437 111 3 1046 1460 3 427 0.0 608
Msa0519400 MtrunA17_Chr5g0407211 66.995 406 81 9 253 632 10 388 9.13e-174 526
Msa0519400 MtrunA17_Chr5g0407251 66.133 437 114 3 1046 1460 3 427 0.0 600
Msa0519400 MtrunA17_Chr5g0407251 66.502 406 83 9 253 632 10 388 7.12e-172 521
Msa0519400 MtrunA17_Chr3g0134851 47.882 543 183 9 934 1454 2 466 4.08e-127 403
Msa0519400 MtrunA17_Chr3g0134851 45.958 433 116 11 230 632 89 433 1.61e-87 293
Msa0519400 MtrunA17_Chr5g0430361 41.443 485 259 10 979 1454 591 1059 3.40e-103 355
Msa0519400 MtrunA17_Chr5g0430361 38.272 405 159 12 266 632 675 1026 1.05e-73 268
Msa0519400 MtrunA17_Chr3g0105291 42.308 416 223 8 1045 1452 602 1008 7.35e-96 335
Msa0519400 MtrunA17_Chr3g0105291 37.192 406 185 10 256 632 613 977 9.29e-70 256
Msa0519400 MtrunA17_Chr2g0316251 35.666 443 262 8 1024 1456 741 1170 7.02e-71 262
Msa0519400 MtrunA17_Chr2g0316251 33.249 394 190 10 268 632 786 1135 1.05e-51 200
Msa0519400 MtrunA17_Chr1g0205451 31.818 506 308 9 978 1452 513 1012 1.27e-65 246
Msa0519400 MtrunA17_Chr1g0205451 32.108 408 204 10 270 646 630 995 1.80e-48 190
Msa0519400 MtrunA17_Chr1g0185491 33.806 423 260 7 1043 1454 809 1222 1.71e-65 245
Msa0519400 MtrunA17_Chr1g0185491 30.886 395 200 10 269 632 837 1189 1.82e-44 177
Msa0519400 MtrunA17_Chr7g0259981 31.056 322 191 5 1139 1458 6 298 5.82e-44 162
Msa0519400 MtrunA17_Chr7g0259981 29.455 275 151 8 380 632 8 261 2.85e-30 122
Msa0519400 MtrunA17_Chr1g0182481 27.110 391 225 10 1079 1427 495 867 2.70e-38 155
Msa0519400 MtrunA17_Chr7g0265211 26.897 435 228 13 1080 1447 531 942 5.16e-37 152
Msa0519400 MtrunA17_Chr7g0265211 25.962 416 213 20 280 632 531 914 9.90e-18 89.7
Msa0519400 MtrunA17_Chr1g0179841 25.917 436 231 13 1080 1447 386 797 4.20e-32 135
Msa0519400 MtrunA17_Chr4g0028111 24.646 353 197 9 1144 1434 225 570 5.59e-23 105
Msa0519400 MtrunA17_Chr4g0055731 20.853 422 246 11 1045 1446 110 463 2.49e-21 99.4
Msa0519400 MtrunA17_Chr4g0055731 24.719 267 144 9 385 632 209 437 1.69e-16 84.3
Msa0519400 MtrunA17_Chr2g0320451 29.586 169 111 4 1291 1458 866 1027 2.29e-17 88.6
Msa0519400 MtrunA17_Chr2g0320451 30.000 140 93 2 498 632 852 991 6.39e-13 73.9
Msa0519400 MtrunA17_Chr2g0320451 28.163 245 155 5 952 1189 370 600 1.41e-11 69.7
Msa0519400 MtrunA17_Chr4g0025251 26.357 258 167 8 1215 1455 453 704 3.36e-16 84.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0519400 AT5G58610.4 40.723 415 239 5 1045 1454 367 779 2.08e-93 323
Msa0519400 AT5G58610.4 30.594 657 337 21 42 632 143 746 1.32e-65 241
Msa0519400 AT5G58610.8 40.723 415 239 5 1045 1454 598 1010 2.77e-91 320
Msa0519400 AT5G58610.8 30.594 657 337 21 42 632 374 977 7.70e-65 241
Msa0519400 AT5G58610.2 40.723 415 239 5 1045 1454 598 1010 2.77e-91 320
Msa0519400 AT5G58610.2 30.594 657 337 21 42 632 374 977 7.70e-65 241
Msa0519400 AT5G58610.3 40.723 415 239 5 1045 1454 598 1010 4.34e-91 321
Msa0519400 AT5G58610.3 30.594 657 337 21 42 632 374 977 1.32e-64 241
Msa0519400 AT5G58610.5 40.723 415 239 5 1045 1454 589 1001 9.88e-91 320
Msa0519400 AT5G58610.5 30.594 657 337 21 42 632 365 968 1.52e-64 240
Msa0519400 AT5G58610.7 40.723 415 239 5 1045 1454 589 1001 1.12e-90 320
Msa0519400 AT5G58610.7 30.594 657 337 21 42 632 365 968 1.44e-64 240
Msa0519400 AT5G58610.6 38.499 413 225 5 1045 1454 589 975 2.23e-81 291
Msa0519400 AT5G58610.6 30.062 642 334 19 42 632 365 942 4.41e-61 229
Msa0519400 AT5G58610.1 38.499 413 225 5 1045 1454 589 975 3.01e-81 291
Msa0519400 AT5G58610.1 30.062 642 334 19 42 632 365 942 5.30e-61 229
Msa0519400 AT5G58610.10 40.730 356 204 5 1045 1395 598 951 1.03e-75 273
Msa0519400 AT5G58610.10 30.031 636 326 21 42 611 374 956 6.67e-59 221
Msa0519400 AT5G58610.9 40.390 359 207 5 1045 1398 589 945 2.73e-75 271
Msa0519400 AT5G58610.9 30.031 636 326 21 42 611 365 947 8.07e-59 221
Msa0519400 AT5G36740.5 32.339 436 279 7 1026 1456 529 953 1.04e-65 244
Msa0519400 AT5G36740.5 31.525 387 204 11 269 632 570 918 9.53e-48 187
Msa0519400 AT5G36740.1 32.339 436 279 7 1026 1456 529 953 1.04e-65 244
Msa0519400 AT5G36740.1 31.525 387 204 11 269 632 570 918 9.53e-48 187
Msa0519400 AT1G05380.3 32.767 412 268 4 1045 1452 519 925 2.33e-65 243
Msa0519400 AT1G05380.3 29.630 405 215 8 270 646 546 908 3.24e-44 176
Msa0519400 AT1G05380.1 32.767 412 268 4 1045 1452 519 925 2.33e-65 243
Msa0519400 AT1G05380.1 29.630 405 215 8 270 646 546 908 3.24e-44 176
Msa0519400 AT1G05380.2 32.767 412 268 4 1045 1452 519 925 2.33e-65 243
Msa0519400 AT1G05380.2 29.630 405 215 8 270 646 546 908 3.24e-44 176
Msa0519400 AT5G58610.11 39.319 323 189 5 1045 1362 589 909 8.41e-64 236
Msa0519400 AT5G58610.11 28.595 598 308 21 42 573 365 909 2.44e-45 179
Msa0519400 AT5G36740.4 31.614 446 279 8 1026 1456 376 810 6.30e-63 234
Msa0519400 AT5G36740.4 30.730 397 204 12 269 632 417 775 1.21e-44 177
Msa0519400 AT3G14980.6 31.690 426 263 7 1045 1458 620 1029 1.56e-62 235
Msa0519400 AT3G14980.6 30.435 391 203 7 268 632 645 992 3.46e-46 182
Msa0519400 AT3G14980.1 31.690 426 263 7 1045 1458 620 1029 1.56e-62 235
Msa0519400 AT3G14980.1 30.435 391 203 7 268 632 645 992 3.46e-46 182
Msa0519400 AT3G14980.2 31.690 426 263 7 1045 1458 620 1029 1.56e-62 235
Msa0519400 AT3G14980.2 30.435 391 203 7 268 632 645 992 3.46e-46 182
Msa0519400 AT3G14980.5 31.690 426 263 7 1045 1458 575 984 1.69e-62 234
Msa0519400 AT3G14980.5 30.435 391 203 7 268 632 600 947 3.88e-46 182
Msa0519400 AT3G14980.3 31.690 426 263 7 1045 1458 620 1029 2.23e-62 233
Msa0519400 AT3G14980.3 30.435 391 203 7 268 632 645 992 3.48e-46 182
Msa0519400 AT5G36670.4 30.973 452 278 9 1026 1456 529 967 2.31e-59 224
Msa0519400 AT5G36670.4 30.287 383 204 12 269 628 570 912 2.66e-42 170
Msa0519400 AT5G36670.5 30.973 452 278 9 1026 1456 529 967 2.31e-59 224
Msa0519400 AT5G36670.5 30.287 383 204 12 269 628 570 912 2.66e-42 170
Msa0519400 AT4G14920.3 30.310 419 281 5 1042 1456 576 987 4.66e-57 217
Msa0519400 AT4G14920.3 28.642 405 217 9 274 650 610 970 1.34e-41 167
Msa0519400 AT4G14920.2 30.310 419 281 5 1042 1456 576 987 4.69e-57 217
Msa0519400 AT4G14920.2 28.642 405 217 9 274 650 610 970 1.33e-41 167
Msa0519400 AT4G14920.1 30.310 419 281 5 1042 1456 576 987 4.69e-57 217
Msa0519400 AT4G14920.1 28.642 405 217 9 274 650 610 970 1.33e-41 167
Msa0519400 AT5G36670.3 30.303 462 278 10 1026 1456 376 824 2.11e-56 214
Msa0519400 AT5G36670.3 29.517 393 204 13 269 628 417 769 4.26e-39 159
Msa0519400 AT5G36670.2 32.620 374 236 7 1026 1394 529 891 4.88e-56 212
Msa0519400 AT5G36670.2 30.833 360 188 11 269 605 570 891 1.69e-41 166
Msa0519400 AT5G36740.2 32.620 374 236 7 1026 1394 529 891 4.88e-56 212
Msa0519400 AT5G36740.2 30.833 360 188 11 269 605 570 891 1.69e-41 166
Msa0519400 AT5G36740.3 32.620 374 236 7 1026 1394 529 891 4.88e-56 212
Msa0519400 AT5G36740.3 30.833 360 188 11 269 605 570 891 1.69e-41 166
Msa0519400 AT5G36670.1 30.303 462 278 10 1026 1456 529 977 6.49e-56 214
Msa0519400 AT5G36670.1 29.517 393 204 13 269 628 570 922 6.59e-39 159
Msa0519400 AT5G63900.1 33.236 343 194 10 1124 1456 227 544 9.97e-51 189
Msa0519400 AT5G63900.1 35.636 275 141 11 379 632 250 509 1.77e-38 153
Msa0519400 AT3G14980.4 31.722 331 198 7 1045 1363 620 934 4.62e-45 178
Msa0519400 AT3G14980.4 27.928 333 171 7 268 574 645 934 4.65e-29 127
Msa0519400 AT2G37520.1 27.126 435 230 13 1080 1454 410 817 3.55e-40 162
Msa0519400 AT2G37520.1 24.651 430 191 13 280 632 410 783 1.92e-27 121
Msa0519400 AT3G53680.1 29.146 398 213 13 1080 1427 427 805 1.21e-37 154
Msa0519400 AT3G53680.1 26.353 425 189 14 280 632 427 799 5.97e-28 123
Msa0519400 AT3G53680.2 29.146 398 213 13 1080 1427 429 807 1.31e-37 154
Msa0519400 AT3G53680.2 26.353 425 189 14 280 632 429 801 5.99e-28 123
Msa0519400 AT2G36720.1 24.769 432 251 9 1080 1452 557 973 5.10e-36 149
Msa0519400 AT2G36720.1 25.410 488 209 18 246 647 538 956 1.95e-25 115
Msa0519400 AT2G36720.2 24.769 432 251 9 1080 1452 557 973 5.10e-36 149
Msa0519400 AT2G36720.2 25.410 488 209 18 246 647 538 956 1.95e-25 115
Msa0519400 AT2G27980.1 26.434 488 261 13 1041 1455 598 1060 3.00e-35 147

Find 271 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCACTCTCGCTGGATTTA+AGG 0.128168 3_4:+71452315 Msa0519400:CDS
AAAACAACATCTTCTTTCTT+TGG 0.186886 3_4:+71446180 Msa0519400:CDS
AAAACAACATCTTCTTTCTT+TGG 0.186886 3_4:+71451046 Msa0519400:CDS
TATTACTTTCTTAGAATTTC+AGG 0.193107 3_4:+71453356 Msa0519400:CDS
TGTGCGGAAAAGTTTCATTT+TGG 0.198708 3_4:+71447720 Msa0519400:CDS
CACCATTCTCTTACAGCTTC+TGG 0.208379 3_4:-71450960 None:intergenic
GTTGCAACTATAAGAATTTA+TGG 0.208645 3_4:+71448119 Msa0519400:CDS
ATAAGATTCAATTTAGTATT+AGG 0.210355 3_4:+71453426 Msa0519400:CDS
AATCTTATCAAAGGCCATTT+AGG 0.221992 3_4:-71453411 None:intergenic
GTTTGTTCTATTTGTGGTTT+TGG 0.227006 3_4:+71452493 Msa0519400:CDS
TACCATTCTCTTACAGCTTC+TGG 0.232489 3_4:-71446094 None:intergenic
TTGATGTCGCTGCTGCTTCC+TGG 0.237739 3_4:-71446540 None:intergenic
AGATTAGCTGCAACCGTTAT+TGG 0.238814 3_4:-71447864 None:intergenic
TACACATTCTTGCTTGCATT+TGG 0.242887 3_4:-71447661 None:intergenic
CCAACTATTGATGCTTTATC+TGG 0.251503 3_4:+71447987 Msa0519400:CDS
CATAAACGCTTGAACTTTCA+TGG 0.256618 3_4:+71448053 Msa0519400:CDS
TTGTCCTCGATGTTCTTTAT+TGG 0.261579 3_4:-71453175 None:intergenic
TGGTTTCTATAATGTGATTT+TGG 0.261940 3_4:+71453074 Msa0519400:CDS
CCAACAATTGATGCTTTAAC+TGG 0.273315 3_4:+71452988 Msa0519400:CDS
AAGTGCTGGTAGAAAGAATT+TGG 0.277416 3_4:+71446147 Msa0519400:CDS
GTGGCTACCATAAGGATTTA+TGG 0.283165 3_4:+71453120 Msa0519400:CDS
GTTTGTTCTATTTGTGATTT+GGG 0.285604 3_4:+71447516 Msa0519400:CDS
TGCTGCAGTTGAAGGGCGTT+CGG 0.292408 3_4:-71446332 None:intergenic
TTTCTTTGGGTTGGAAGCTT+TGG 0.293261 3_4:+71451060 Msa0519400:CDS
ATCATCCACTAGTATCTTCT+TGG 0.299268 3_4:+71452363 Msa0519400:CDS
AAACAACATCTTCTTTCTTT+GGG 0.299298 3_4:+71446181 Msa0519400:CDS
AAACAACATCTTCTTTCTTT+GGG 0.299298 3_4:+71451047 Msa0519400:CDS
ATTATTGTTGCTGCTGTTAC+TGG 0.303084 3_4:-71451221 None:intergenic
TTATGTCTAAAGAAGTTGTT+AGG 0.303385 3_4:+71447837 Msa0519400:intron
TATTAAATAGAGAAGGTATA+AGG 0.305895 3_4:+71452149 Msa0519400:CDS
AGAGAATGGTACCGCTTAAC+AGG 0.307427 3_4:+71446106 Msa0519400:CDS
AACAGTATCGTTATTTGCTT+TGG 0.308260 3_4:-71447496 None:intergenic
TGTTTGTTCTATTTGTGATT+TGG 0.310842 3_4:+71447515 Msa0519400:CDS
AGATTATCCGCAACCTTAAC+TGG 0.315691 3_4:-71452841 None:intergenic
GTTGATAAAGAATAAAGTTT+TGG 0.317891 3_4:+71452195 Msa0519400:CDS
AAAGGTATTCACTTGTTTCT+TGG 0.322354 3_4:+71452173 Msa0519400:CDS
GTTGATAAAGAATCAAGTTT+TGG 0.324712 3_4:+71447068 Msa0519400:intron
GTACATTCTTGTTTACGTTT+AGG 0.328883 3_4:-71452637 None:intergenic
AACCACTGAAGAAACCTAAA+TGG 0.332081 3_4:+71453397 Msa0519400:CDS
GCTGCAGTTGAAGGGCGTTC+GGG 0.336474 3_4:-71446331 None:intergenic
AGAGAATGGTGCCGCTTAAC+AGG 0.346625 3_4:+71450972 Msa0519400:CDS
ACACATTCTTGCTTGCATTT+GGG 0.347129 3_4:-71447660 None:intergenic
GAAAATGGAGGAAGTGATTT+CGG 0.358446 3_4:+71453098 Msa0519400:CDS
TTTAGGTCTCGATCGAGTTC+CGG 0.360500 3_4:+71447590 Msa0519400:intron
GACACATGGACAAAATCTTT+TGG 0.362557 3_4:+71453291 Msa0519400:CDS
GATACTGTTTGTTCTATTTG+TGG 0.366590 3_4:+71452487 Msa0519400:CDS
AACAAGAATATTGTTATCAT+TGG 0.367054 3_4:-71452665 None:intergenic
GCAATATAGTTTGCGCGAAC+AGG 0.368324 3_4:+71452788 Msa0519400:CDS
GGTTTCTCTTTCAACTGTAA+TGG 0.368815 3_4:-71451722 None:intergenic
GAGAAACAATTGACTCGCTT+TGG 0.374118 3_4:+71453228 Msa0519400:CDS
GAAAATGGGTAAAGTCATTT+CGG 0.376245 3_4:+71448097 Msa0519400:CDS
GTGAGCAGAAATTTCACTTT+GGG 0.378660 3_4:+71452698 Msa0519400:CDS
TCCCCGCGTCAGAATTTACT+TGG 0.381326 3_4:-71447371 None:intergenic
TTTAGATCTTGATCGAGTTC+CGG 0.381635 3_4:+71452567 Msa0519400:CDS
GTTACTGGTGCTGCAGTTGA+AGG 0.385036 3_4:-71451206 None:intergenic
ATCGAGTTCCGGATGGTGAT+TGG 0.385313 3_4:+71452578 Msa0519400:CDS
TAGGTTTCTTCAGTGGTTTA+AGG 0.387281 3_4:-71453392 None:intergenic
CCAGATAAAGCATCAATAGT+TGG 0.388520 3_4:-71447987 None:intergenic
CCAGTTAAAGCATCAATTGT+TGG 0.391070 3_4:-71452988 None:intergenic
AGTTGCTGCTGCTTCCTCCT+TGG 0.398593 3_4:-71446605 None:intergenic
CCTTCGGTTGCACTTTCAGC+TGG 0.398742 3_4:-71451595 None:intergenic
TGCTATTGCTGCTGCTTCCT+CGG 0.398745 3_4:-71451951 None:intergenic
CGTGTTAATTTCAATATCAC+TGG 0.399307 3_4:+71447180 Msa0519400:CDS
AACATCTTCTTTCTTTGGGT+TGG 0.401046 3_4:+71446185 Msa0519400:CDS
AACATCTTCTTTCTTTGGGT+TGG 0.401046 3_4:+71451051 Msa0519400:CDS
CGACAACAACATCAATATAT+TGG 0.408399 3_4:+71451429 Msa0519400:CDS
TCCTCGATGTTCTTTATTGG+TGG 0.411517 3_4:-71453172 None:intergenic
ATCGAGTTCCGGATGGAGAT+TGG 0.415728 3_4:+71447601 Msa0519400:CDS
CCCTACTTCAGAATTTCCTT+CGG 0.418606 3_4:-71447460 None:intergenic
TTTCAATATCACTGGATTTG+AGG 0.420799 3_4:+71447188 Msa0519400:CDS
GGTTTCTCTTTCGACGGCAA+TGG 0.423351 3_4:-71446574 None:intergenic
ATTAAATAGAGAAGGTATAA+GGG 0.424847 3_4:+71452150 Msa0519400:CDS
TAAATTTGAATCAGAAGTTA+CGG 0.429569 3_4:+71446855 Msa0519400:intron
TGTTGTTCTTTCTGTTTCCT+CGG 0.431751 3_4:-71446407 None:intergenic
TTTGGGTGTGTAAAGGCGTT+AGG 0.435106 3_4:+71447738 Msa0519400:CDS
AGTCGCTCAATCGACTGAAA+TGG 0.435511 3_4:-71451656 None:intergenic
CAGCAGCGACATCAATCTAT+TGG 0.437179 3_4:+71446548 Msa0519400:CDS
AGTAACAATGTTGTCAAAAG+AGG 0.439917 3_4:+71447120 Msa0519400:CDS
TATAAGAATTTATGGTCAAA+AGG 0.441015 3_4:+71448127 Msa0519400:CDS
GCTTCTTCCTCGGATTCTCT+TGG 0.442664 3_4:-71451407 None:intergenic
CTTTGAATTGACTTCTAATG+AGG 0.442824 3_4:+71451988 Msa0519400:CDS
ACCATCCACTAGTATCTTGT+TGG 0.443708 3_4:+71447236 Msa0519400:CDS
CAGATAAAGCATCAATAGTT+GGG 0.446006 3_4:-71447986 None:intergenic
TTGCACTTCAAAATTTCCTT+CGG 0.447322 3_4:-71447406 None:intergenic
TAAACCGGAAGTTACTAATT+CGG 0.448302 3_4:+71452102 Msa0519400:CDS
TTTGGGTGTGTAAAGGCAAC+AGG 0.448561 3_4:+71452715 Msa0519400:CDS
ATTTGCTTCATAGTTTGCTT+CGG 0.449437 3_4:-71452461 None:intergenic
GCAGTGGTGAAAAGAAGAAT+TGG 0.449591 3_4:+71447784 Msa0519400:CDS
GCTTCCTCCTTGGATTCTCT+CGG 0.449759 3_4:-71446595 None:intergenic
TCAGAGGCTTCTGGTAAGAA+AGG 0.450319 3_4:+71446994 Msa0519400:CDS
TCAGAGGATTGTGGTAGAAG+AGG 0.451281 3_4:+71446937 Msa0519400:CDS
TGTTGTTGTCGCTTCTTCCT+CGG 0.452875 3_4:-71451417 None:intergenic
ACTGATACCTCGGATTCCTT+CGG 0.453162 3_4:-71451611 None:intergenic
CGGTTGCAGCTAATCTAACT+TGG 0.454424 3_4:+71447871 Msa0519400:CDS
ATTGAGCGACTGAGAGCATC+TGG 0.454882 3_4:+71451668 Msa0519400:CDS
TGTGTAAAGGCGTTAGGACT+TGG 0.455855 3_4:+71447744 Msa0519400:CDS
TGCAAGCAAGAATGTGTAGA+TGG 0.456542 3_4:+71447666 Msa0519400:CDS
GACACATGGACAAAAGCGTT+TGG 0.456899 3_4:+71448290 Msa0519400:CDS
CAGAGGATTGTGGTAGAAGA+GGG 0.460042 3_4:+71446938 Msa0519400:CDS
ACAGCTTCTGGACAATGCTC+AGG 0.460946 3_4:-71446082 None:intergenic
AGGAATGCGTCGTTTGTTGA+TGG 0.462361 3_4:+71453197 Msa0519400:CDS
TGAATCAGAAGTTACGGATT+CGG 0.462982 3_4:+71446861 Msa0519400:intron
GCTATTGTGGAAACCAGTTA+AGG 0.464746 3_4:+71452828 Msa0519400:CDS
TGATGTCGCTGCTGCTTCCT+GGG 0.467486 3_4:-71446539 None:intergenic
ACTAGTATCTTCTTGGAAGA+TGG 0.470828 3_4:+71452370 Msa0519400:CDS
GCATGTGATTCAATCTAAAC+CGG 0.473942 3_4:+71452087 Msa0519400:CDS
GGTTGCACTTTCAGCTGGAA+TGG 0.474012 3_4:-71451590 None:intergenic
TACTACATTATCAACATCAA+TGG 0.474099 3_4:+71452054 Msa0519400:CDS
GTTATACTTCTCCTAACAAT+GGG 0.474735 3_4:+71446248 Msa0519400:CDS
GTTATACTTCTCCTAACAAT+GGG 0.474735 3_4:+71451114 Msa0519400:CDS
TGATTTCGGTGGCTACCATA+AGG 0.474912 3_4:+71453112 Msa0519400:CDS
CTTGTGACCATAAATCCTTA+TGG 0.478256 3_4:-71453127 None:intergenic
GAGAAACAGTTGACACGCTT+AGG 0.478300 3_4:+71448227 Msa0519400:CDS
TTCTTCAATGCAACTCTCGC+AGG 0.478869 3_4:-71446296 None:intergenic
GTGCAAGTAAATTCTGAAGC+AGG 0.478869 3_4:+71447423 Msa0519400:CDS
TTCTTCAATGCAACTCTCGC+AGG 0.478869 3_4:-71451162 None:intergenic
GGAAGATGGAAGGTCGTTGT+TGG 0.479840 3_4:+71452384 Msa0519400:CDS
CCCACCGAATTAGTAACTTC+CGG 0.484863 3_4:-71452106 None:intergenic
TCGCTCTTTAGAAAGTAAAC+AGG 0.485992 3_4:-71451384 None:intergenic
GCTGCTTCCTCGGATTCACT+TGG 0.486702 3_4:-71451941 None:intergenic
CTGCAGTTGAAGGGTGTTTG+AGG 0.486894 3_4:-71451196 None:intergenic
TGCTCTAGCTACTGCTTCCT+CGG 0.490289 3_4:-71451285 None:intergenic
TCCTCTTGCTACTGATACCT+CGG 0.491108 3_4:-71451621 None:intergenic
ATTTCACTTTGGGTGTGTAA+AGG 0.492058 3_4:+71452708 Msa0519400:CDS
TAAAGATAGTGCTGGTAGAA+AGG 0.492174 3_4:+71451007 Msa0519400:CDS
TGTTGTTGCTGCTGCTTCCA+CGG 0.492759 3_4:-71451486 None:intergenic
GACGTTGTTGCTGCAGTTGA+AGG 0.492904 3_4:-71446340 None:intergenic
AGAGCTACCGAGGGAATCCC+AGG 0.493555 3_4:+71446522 Msa0519400:CDS
AGTTGCTCATTCGACTGTAA+TGG 0.494258 3_4:-71451455 None:intergenic
ACTAGTATCTTGTTGGGAGA+TGG 0.496603 3_4:+71447243 Msa0519400:CDS
GCTGAAGCAAATTCTGAAGC+AGG 0.497345 3_4:+71447333 Msa0519400:intron
GGTCGTTGTTGGACTGTCAA+AGG 0.500201 3_4:+71447268 Msa0519400:CDS
TTGTCTTCGATATTGTTCCT+TGG 0.503462 3_4:-71448174 None:intergenic
AGTCGCTCTTTCGACTGTAA+TGG 0.504195 3_4:-71451524 None:intergenic
AGTCGCTCTTTCGACTGTAA+TGG 0.504195 3_4:-71451788 None:intergenic
CAATTTCTTCGTCTCCACTA+CGG 0.504197 3_4:+71446362 Msa0519400:CDS
GCTGTTTCCTCAGATTCTCT+CGG 0.506010 3_4:-71446463 None:intergenic
CCATCCACTAGTATCTTGTT+GGG 0.506128 3_4:+71447237 Msa0519400:CDS
GGTAGCTCTTTCGATTGTAA+AGG 0.512790 3_4:-71446508 None:intergenic
CCATGTGTCTATAGCATCCT+CGG 0.512950 3_4:-71453277 None:intergenic
TGTGAGCAGAAATTTCACTT+TGG 0.513785 3_4:+71452697 Msa0519400:CDS
CTGCAGTTGAAGGGCGTTCG+GGG 0.514386 3_4:-71446330 None:intergenic
ACTGGATTTGAGGCTCATGC+TGG 0.514944 3_4:+71447198 Msa0519400:CDS
CGTTATACTTCTCCTAACAA+TGG 0.516763 3_4:+71446247 Msa0519400:CDS
CGTTATACTTCTCCTAACAA+TGG 0.516763 3_4:+71451113 Msa0519400:CDS
CAGAGGCTTCTGGTAAGAAA+GGG 0.518719 3_4:+71446995 Msa0519400:CDS
GGGAGATGGAAGGTCGTTGT+TGG 0.519941 3_4:+71447257 Msa0519400:CDS
TGCAGTTGAAGGGTGTTTGA+GGG 0.525454 3_4:-71451195 None:intergenic
CCATGTGTCTATAGCATCCT+CGG 0.526184 3_4:-71448276 None:intergenic
ACTGCTTCCTCAGATTCTCT+CGG 0.534592 3_4:-71451743 None:intergenic
AGAGAAACCGAGAGAATCCA+AGG 0.534686 3_4:+71446588 Msa0519400:CDS
ACTGCTTCCTCGGATTCTCT+AGG 0.535233 3_4:-71451275 None:intergenic
GCCGAAGGAAATTCTGAAGT+AGG 0.536925 3_4:+71447459 Msa0519400:CDS
TGCGAGAGTTGCATTGAAGA+AGG 0.537811 3_4:+71446298 Msa0519400:CDS
TGCGAGAGTTGCATTGAAGA+AGG 0.537811 3_4:+71451164 Msa0519400:CDS
GTTACTAATTCGGTGGGTAG+TGG 0.540215 3_4:+71452112 Msa0519400:CDS
CTCATTAGAAGTCAATTCAA+AGG 0.543407 3_4:-71451987 None:intergenic
TTACTGGTGCTGCAGTTGAA+GGG 0.544490 3_4:-71451205 None:intergenic
GTCCAGAAGCTGTAAGAGAA+TGG 0.545236 3_4:+71446092 Msa0519400:CDS
AAGATACTAGTGGATGATGT+AGG 0.545362 3_4:-71452358 None:intergenic
GTCGTTGTTGGACTGTCAAA+GGG 0.545406 3_4:+71447269 Msa0519400:CDS
GTGGAAACCAGTTAAGGTTG+CGG 0.547741 3_4:+71452834 Msa0519400:CDS
ACAGCTTCTGGACAATGCTC+AGG 0.548245 3_4:-71450948 None:intergenic
TTTAACAGAAATGAAACTAG+AGG 0.548944 3_4:-71452020 None:intergenic
ATAGAGAAGGTATAAGGGAA+AGG 0.549390 3_4:+71452155 Msa0519400:CDS
CGGTGGGTAGTGGTAAAAGA+GGG 0.549718 3_4:+71452122 Msa0519400:CDS
GAGAAGAATTCAGAGGATTG+TGG 0.552564 3_4:+71446928 Msa0519400:CDS
ACGCTTAGGAGTTGAAAGCT+TGG 0.553379 3_4:+71448241 Msa0519400:CDS
GTCCAGAAGCTGTAAGAGAA+TGG 0.553572 3_4:+71450958 Msa0519400:CDS
ACTAAATTGAATCTTATCAA+AGG 0.553822 3_4:-71453420 None:intergenic
TCGGTGGGTAGTGGTAAAAG+AGG 0.553960 3_4:+71452121 Msa0519400:CDS
TCTCTCGGTTTCTCTTTCGA+CGG 0.559043 3_4:-71446580 None:intergenic
GTCGTTGTTGGAATGTCAAA+GGG 0.560420 3_4:+71452396 Msa0519400:CDS
GTAACAATGTTGTCAAAAGA+GGG 0.560691 3_4:+71447121 Msa0519400:CDS
GCTGCTTCCTGGGATTCCCT+CGG 0.560736 3_4:-71446529 None:intergenic
GGTCGTTGTTGGAATGTCAA+AGG 0.562897 3_4:+71452395 Msa0519400:CDS
TATGTCTAAAGAAGTTGTTA+GGG 0.563880 3_4:+71447838 Msa0519400:intron
GTTGTTAGGGAAACCAATAA+CGG 0.563987 3_4:+71447851 Msa0519400:CDS
GGGATGGTATTAAATAGAGA+AGG 0.564639 3_4:+71452142 Msa0519400:CDS
GGCCATTTAGGTTTCTTCAG+TGG 0.564961 3_4:-71453399 None:intergenic
TGCAGTTGAAGGGCGTTCGG+GGG 0.566749 3_4:-71446329 None:intergenic
CCGAAGGAAATTCTGAAGTA+GGG 0.567971 3_4:+71447460 Msa0519400:CDS
CAAGATCGTAAAGAAAGTGC+TGG 0.568933 3_4:+71446133 Msa0519400:CDS
AACAATGTTGTCAAAAGAGG+GGG 0.570596 3_4:+71447123 Msa0519400:CDS
GTCACAATGTTGTTACAAGC+GGG 0.572482 3_4:+71452248 Msa0519400:CDS
ACCGGAAGTTACTAATTCGG+TGG 0.573180 3_4:+71452105 Msa0519400:CDS
GGTAGCCACGAAAACTATCT+CGG 0.575564 3_4:-71448153 None:intergenic
AGGTTGCGGATAATCTAACT+TGG 0.576168 3_4:+71452848 Msa0519400:CDS
GGACAGAACCAATCACCATC+CGG 0.576643 3_4:-71452586 None:intergenic
AGAGAAACCGAGAGAATCTG+AGG 0.577170 3_4:+71451736 Msa0519400:CDS
GGACAGAACCAATCTCCATC+CGG 0.578561 3_4:-71447609 None:intergenic
CCCCGCGTCAGAATTTACTT+GGG 0.579731 3_4:-71447370 None:intergenic
TGCAAGTAAATTCTGAAGCA+GGG 0.580351 3_4:+71447424 Msa0519400:CDS
GCCCAAGTAAATTCTGACGC+GGG 0.582837 3_4:+71447369 Msa0519400:CDS
GGGACTAATGTGCTCTGTCG+TGG 0.584268 3_4:+71452223 Msa0519400:CDS
TATGTCTAAAGAAGCTATTG+TGG 0.590646 3_4:+71452815 Msa0519400:CDS
CATAAGGATTTATGGTCACA+AGG 0.591190 3_4:+71453128 Msa0519400:CDS
AGGTAGTGATAAAAGAGGAA+AGG 0.591418 3_4:+71446885 Msa0519400:CDS
ACGTTGTTGCTGCAGTTGAA+GGG 0.592488 3_4:-71446339 None:intergenic
TCAAAGACGGAAGGTGAAAG+AGG 0.593891 3_4:+71447024 Msa0519400:CDS
AAAGAGACCGAGAGAATCTG+AGG 0.594374 3_4:+71446456 Msa0519400:CDS
GATCTTGTAGTCCTGTTAAG+CGG 0.594532 3_4:-71450983 None:intergenic
CAAGATCGTAAAGATAGTGC+TGG 0.595589 3_4:+71450999 Msa0519400:CDS
TTTAATGGAGAAGAATTCAG+AGG 0.596793 3_4:+71446921 Msa0519400:CDS
AATAAAGAACATCGAGGACA+AGG 0.599710 3_4:+71453177 Msa0519400:CDS
TGTTCTATTTGTGATTTGGG+AGG 0.600755 3_4:+71447519 Msa0519400:CDS
CTGAAGCAAATTCTGAAGCA+GGG 0.601311 3_4:+71447334 Msa0519400:intron
AGAGCGACTGAGAGAATCTG+AGG 0.606930 3_4:+71451538 Msa0519400:CDS
GTATCTTCTTGGAAGATGGA+AGG 0.608492 3_4:+71452374 Msa0519400:CDS
ATCTCCCAACAAGATACTAG+TGG 0.609147 3_4:-71447241 None:intergenic
GAAAGGGAAGGTATCAAAGA+CGG 0.611839 3_4:+71447011 Msa0519400:CDS
TCAAGTCACATTGCCAGCAG+TGG 0.612235 3_4:+71447768 Msa0519400:CDS
AAAGAGATTGAGAGAATCCG+AGG 0.612293 3_4:+71446390 Msa0519400:CDS
TCGCTTTGGAGTAGAAAGCA+TGG 0.612726 3_4:+71453242 Msa0519400:CDS
GATCTTGTAGCCCTGTTAAG+CGG 0.613318 3_4:-71446117 None:intergenic
AGACGGAAGGTGAAAGAGGA+AGG 0.613430 3_4:+71447028 Msa0519400:CDS
CAACTGAGGTGGAATACAGA+AGG 0.615320 3_4:-71452544 None:intergenic
CAAGATCTAAACAACTGAGG+TGG 0.615408 3_4:-71452555 None:intergenic
CCCAACAAGATACTAGTGGA+TGG 0.615712 3_4:-71447237 None:intergenic
TACAATCGAAAGAGCTACCG+AGG 0.616630 3_4:+71446512 Msa0519400:CDS
AAAGAAGCGTAAGTTAAATG+TGG 0.618501 3_4:+71452936 Msa0519400:CDS
GATCTTGATCGAGTTCCGGA+TGG 0.620225 3_4:+71452571 Msa0519400:CDS
AGAGCGACCAAGAGAATCCG+AGG 0.620291 3_4:+71451400 Msa0519400:CDS
AATGTGAATAGTGATGATGA+TGG 0.621059 3_4:+71452883 Msa0519400:CDS
ATCTTCCAAGAAGATACTAG+TGG 0.622444 3_4:-71452368 None:intergenic
GGTCTCGATCGAGTTCCGGA+TGG 0.624514 3_4:+71447594 Msa0519400:intron
GGGACTAATGTATTCTGTCG+TGG 0.624640 3_4:+71447096 Msa0519400:CDS
CCGGAAGTTACTAATTCGGT+GGG 0.625187 3_4:+71452106 Msa0519400:CDS
AAAGAAGAGAAAGTTGAATG+TGG 0.626130 3_4:+71447935 Msa0519400:CDS
TCGGTAGGTAGTGATAAAAG+AGG 0.626684 3_4:+71446880 Msa0519400:CDS
AGAGCGACTGAGAGAATGCG+AGG 0.629289 3_4:+71451802 Msa0519400:CDS
CAACTGAGGTGGAATGCAGA+AGG 0.629465 3_4:-71447567 None:intergenic
AGTCACAATGTTGTTACAAG+CGG 0.630781 3_4:+71452247 Msa0519400:CDS
CCAGCTGAAAGTGCAACCGA+AGG 0.631294 3_4:+71451595 Msa0519400:CDS
TCTTGTTTGTGTTCAATGTG+CGG 0.633915 3_4:+71447704 Msa0519400:CDS
TCAGAAGTTACGGATTCGGT+AGG 0.634475 3_4:+71446865 Msa0519400:intron
GGGAATCATTCTGTTGCCGA+AGG 0.634763 3_4:+71447444 Msa0519400:CDS
GGGAATCATTATGTTGCCGA+AGG 0.635911 3_4:+71447390 Msa0519400:CDS
GAGAGTTGCATTGAAGAAGG+AGG 0.635933 3_4:+71446301 Msa0519400:CDS
GAGAGTTGCATTGAAGAAGG+AGG 0.635933 3_4:+71451167 Msa0519400:CDS
AAAGCGACCTAGAGAATCCG+AGG 0.636201 3_4:+71451268 Msa0519400:CDS
CCCAAGTAAATTCTGACGCG+GGG 0.636570 3_4:+71447370 Msa0519400:CDS
AGAGTTGCATTGAAGAAGGA+GGG 0.637310 3_4:+71446302 Msa0519400:CDS
AGAGTTGCATTGAAGAAGGA+GGG 0.637310 3_4:+71451168 Msa0519400:CDS
TGAGCAACTGAGAGAATCCG+TGG 0.638615 3_4:+71451469 Msa0519400:CDS
CCGAGGATGCTATAGACACA+TGG 0.638651 3_4:+71448276 Msa0519400:CDS
CCGAGGATGCTATAGACACA+TGG 0.641134 3_4:+71453277 Msa0519400:CDS
AAAGCAACCAAGTGAATCCG+AGG 0.642797 3_4:+71451934 Msa0519400:CDS
GGGTAGTGGTAAAAGAGGGA+TGG 0.643359 3_4:+71452126 Msa0519400:CDS
GGCTTCTGGTAAGAAAGGGA+AGG 0.643581 3_4:+71446999 Msa0519400:CDS
CGAGACCTAAACAACTGAGG+TGG 0.644826 3_4:-71447578 None:intergenic
TAACAATGTTGTCAAAAGAG+GGG 0.650034 3_4:+71447122 Msa0519400:CDS
GTATCTTGTTGGGAGATGGA+AGG 0.650656 3_4:+71447247 Msa0519400:CDS
GGAGCGACAGAGAAAATCTG+AGG 0.653734 3_4:+71451334 Msa0519400:CDS
CATCACTGATAAAAGAGCAA+CGG 0.654608 3_4:+71451855 Msa0519400:CDS
AGGATATAAATCTAGTCACA+TGG 0.655176 3_4:+71452735 Msa0519400:CDS
TGCCCAAGTAAATTCTGACG+CGG 0.656719 3_4:+71447368 Msa0519400:CDS
TCCGAGGTATCAGTAGCAAG+AGG 0.658945 3_4:+71451620 Msa0519400:CDS
AGTGCAACCGAAGGAATCCG+AGG 0.659623 3_4:+71451604 Msa0519400:CDS
AAGGAACAATATCGAAGACA+AGG 0.663403 3_4:+71448176 Msa0519400:CDS
GAGAATGGTACCGCTTAACA+GGG 0.663915 3_4:+71446107 Msa0519400:CDS
GGGAAGGTATCAAAGACGGA+AGG 0.682930 3_4:+71447015 Msa0519400:CDS
AATGGAGGAAGTGATTTCGG+TGG 0.688617 3_4:+71453101 Msa0519400:CDS
GATCAAGATCTAAACAACTG+AGG 0.693653 3_4:-71452558 None:intergenic
GCTGGATTTAAGGATCACGC+TGG 0.704084 3_4:+71452325 Msa0519400:CDS
GTGAATAGTGATGATGATGG+CGG 0.708734 3_4:+71452886 Msa0519400:CDS
ACAATCGAAAGAGCTACCGA+GGG 0.709602 3_4:+71446513 Msa0519400:CDS
GAAACCGAGAGAATCCAAGG+AGG 0.723363 3_4:+71446591 Msa0519400:CDS
TGTTGATAATGTAGTAACCG+TGG 0.738318 3_4:-71452047 None:intergenic
TGTGTCTATAGCATCCTCGG+AGG 0.760446 3_4:-71448273 None:intergenic
GCCACCAATAAAGAACATCG+AGG 0.783033 3_4:+71453171 Msa0519400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTATCTTAGAATTTTA+TGG + chr3_4:71449364-71449383 Msa0519400:intron 10.0%
!! TAATAGTATTATTATTTGAT+AGG + chr3_4:71450447-71450466 Msa0519400:intron 10.0%
!! TTCAATCTTATAATGAATAT+GGG - chr3_4:71448933-71448952 None:intergenic 15.0%
!! TTTCAATCTTATAATGAATA+TGG - chr3_4:71448934-71448953 None:intergenic 15.0%
!! CAAAATTCAAAATTATAAGT+TGG - chr3_4:71449020-71449039 None:intergenic 15.0%
!!! TATAATGTTTTTCCAAAATA+AGG - chr3_4:71449167-71449186 None:intergenic 15.0%
!! TAATCAACAAATCAAATTTA+TGG + chr3_4:71449273-71449292 Msa0519400:intron 15.0%
!!! AACCTTAAAAATAAGTTTTA+TGG + chr3_4:71449598-71449617 Msa0519400:intron 15.0%
!!! ACCTTAAAAATAAGTTTTAT+GGG + chr3_4:71449599-71449618 Msa0519400:intron 15.0%
!!! AATTTTTTTTATGTTGAGAA+AGG + chr3_4:71449751-71449770 Msa0519400:intron 15.0%
!! CTAAAAATTGTTCAAAAATT+AGG - chr3_4:71449829-71449848 None:intergenic 15.0%
!!! CTAATTTTTGAACAATTTTT+AGG + chr3_4:71449827-71449846 Msa0519400:intron 15.0%
!! ATAAGATTCAATTTAGTATT+AGG + chr3_4:71453426-71453445 Msa0519400:CDS 15.0%
!! TAAATTTGAATCAGAAGTTA+CGG + chr3_4:71446855-71446874 Msa0519400:intron 20.0%
!! TATAATGAAGAAAAATTCAG+AGG + chr3_4:71446978-71446997 Msa0519400:CDS 20.0%
!!! TAATGTGATTTTAGAGAAAA+TGG + chr3_4:71448082-71448101 Msa0519400:intron 20.0%
!!! AATGTGATTTTAGAGAAAAT+GGG + chr3_4:71448083-71448102 Msa0519400:intron 20.0%
!! TATAAGAATTTATGGTCAAA+AGG + chr3_4:71448127-71448146 Msa0519400:CDS 20.0%
!!! AGTCATAAAAATGTTTTTGA+TGG + chr3_4:71448452-71448471 Msa0519400:intron 20.0%
!!! AATGATGTACTTTTTTTTCT+AGG + chr3_4:71448500-71448519 Msa0519400:intron 20.0%
!!! ATGATGTACTTTTTTTTCTA+GGG + chr3_4:71448501-71448520 Msa0519400:intron 20.0%
!!! AACATTTGTTAACTCTTATA+CGG + chr3_4:71448771-71448790 Msa0519400:intron 20.0%
!!! GAAGTTATTTTTATCATTAC+AGG + chr3_4:71448797-71448816 Msa0519400:intron 20.0%
!!! ATTTTTATCATTACAGGATT+TGG + chr3_4:71448803-71448822 Msa0519400:intron 20.0%
!!! TCATATTTAAAATAGACATC+AGG - chr3_4:71448983-71449002 None:intergenic 20.0%
!!! AATTATAAGTTGGAAAGTAA+TGG - chr3_4:71449010-71449029 None:intergenic 20.0%
!! AAAAGTTTACATGAAAATTG+AGG + chr3_4:71449186-71449205 Msa0519400:intron 20.0%
!! AACAAATCAAATTTATGGTT+GGG + chr3_4:71449278-71449297 Msa0519400:intron 20.0%
!!! CCTTAAAAATAAGTTTTATG+GGG + chr3_4:71449600-71449619 Msa0519400:intron 20.0%
!!! TTTTAACCTCTTAGAATTTA+TGG - chr3_4:71449641-71449660 None:intergenic 20.0%
!! CGTTGATCATAAAAATAAAA+AGG + chr3_4:71449695-71449714 Msa0519400:intron 20.0%
!!! CTTTTTTTCTTTTCTTTTGA+GGG - chr3_4:71449723-71449742 None:intergenic 20.0%
!! AATTGTCAAACATATTTCTT+GGG + chr3_4:71449873-71449892 Msa0519400:intron 20.0%
!!! TTAATCTCATTCTTGTTTTA+AGG + chr3_4:71450132-71450151 Msa0519400:intron 20.0%
!! CTAATATTGTTTGTATTGAA+AGG - chr3_4:71450191-71450210 None:intergenic 20.0%
!! AAAACTCTATTGTACATATA+TGG + chr3_4:71450513-71450532 Msa0519400:intron 20.0%
!! ATAAAACTAAAGCCTAATTA+GGG + chr3_4:71450551-71450570 Msa0519400:intron 20.0%
!! ATTTGTTTACTTAAGATTCA+AGG - chr3_4:71450645-71450664 None:intergenic 20.0%
!!! AATTGAGTTTTATTTTCGTT+GGG + chr3_4:71450770-71450789 Msa0519400:intron 20.0%
!!! TATTAAATAGAGAAGGTATA+AGG + chr3_4:71452149-71452168 Msa0519400:CDS 20.0%
!!! ATTAAATAGAGAAGGTATAA+GGG + chr3_4:71452150-71452169 Msa0519400:CDS 20.0%
!!! GTTGATAAAGAATAAAGTTT+TGG + chr3_4:71452195-71452214 Msa0519400:CDS 20.0%
!! AACAAGAATATTGTTATCAT+TGG - chr3_4:71452668-71452687 None:intergenic 20.0%
!! GTAATGTTAAAAAGAAGAAT+TGG + chr3_4:71452761-71452780 Msa0519400:CDS 20.0%
!! TATTACTTTCTTAGAATTTC+AGG + chr3_4:71453356-71453375 Msa0519400:CDS 20.0%
!! ACTAAATTGAATCTTATCAA+AGG - chr3_4:71453423-71453442 None:intergenic 20.0%
! AAAACAACATCTTCTTTCTT+TGG + chr3_4:71446180-71446199 Msa0519400:CDS 25.0%
! AAACAACATCTTCTTTCTTT+GGG + chr3_4:71446181-71446200 Msa0519400:CDS 25.0%
! ACATTGACAAAAATAGTAAG+TGG + chr3_4:71446218-71446237 Msa0519400:intron 25.0%
! CATTGACAAAAATAGTAAGT+GGG + chr3_4:71446219-71446238 Msa0519400:intron 25.0%
!! AGGCTTTTCTAATAGTAATA+TGG - chr3_4:71446279-71446298 None:intergenic 25.0%
! GATGTTAATAAAGCTATAGT+AGG + chr3_4:71446793-71446812 Msa0519400:intron 25.0%
! TAATAAAGCTATAGTAGGTA+CGG + chr3_4:71446798-71446817 Msa0519400:intron 25.0%
!!! GGTTTTAAAAACGAGTTTAA+TGG + chr3_4:71446906-71446925 Msa0519400:CDS 25.0%
!!! GTTGATAAAGAATCAAGTTT+TGG + chr3_4:71447068-71447087 Msa0519400:intron 25.0%
! TGTTTGTTCTATTTGTGATT+TGG + chr3_4:71447515-71447534 Msa0519400:CDS 25.0%
! GTTTGTTCTATTTGTGATTT+GGG + chr3_4:71447516-71447535 Msa0519400:CDS 25.0%
! TAACAACTTCTTTAGACATA+AGG - chr3_4:71447838-71447857 None:intergenic 25.0%
! TTATGTCTAAAGAAGTTGTT+AGG + chr3_4:71447837-71447856 Msa0519400:intron 25.0%
! TATGTCTAAAGAAGTTGTTA+GGG + chr3_4:71447838-71447857 Msa0519400:intron 25.0%
!!! AAAGATGTTGTTTTTAGTAG+AGG + chr3_4:71448023-71448042 Msa0519400:CDS 25.0%
! GTTGCAACTATAAGAATTTA+TGG + chr3_4:71448119-71448138 Msa0519400:CDS 25.0%
!!! TTTGATGGTATAGTTTCTTT+TGG + chr3_4:71448467-71448486 Msa0519400:intron 25.0%
!! AAATTCAAACTATGATGGAA+TGG - chr3_4:71448607-71448626 None:intergenic 25.0%
! CACTAAAATTCAAACTATGA+TGG - chr3_4:71448612-71448631 None:intergenic 25.0%
!! ACATTTGTTAACTCTTATAC+GGG + chr3_4:71448772-71448791 Msa0519400:intron 25.0%
! AGAACAAAATTGTGTAACTA+AGG - chr3_4:71448829-71448848 None:intergenic 25.0%
!! ATTTAAAATAGACATCAGGT+CGG - chr3_4:71448979-71448998 None:intergenic 25.0%
! TCAATTAACATTAACGACAA+AGG - chr3_4:71449061-71449080 None:intergenic 25.0%
! ATTACTAAGATCTGTAAATC+AGG + chr3_4:71449103-71449122 Msa0519400:intron 25.0%
! CAACAAATCAAATTTATGGT+TGG + chr3_4:71449277-71449296 Msa0519400:intron 25.0%
! TTTGATACCATGTTGAAATT+GGG + chr3_4:71449567-71449586 Msa0519400:intron 25.0%
!!! CCCCATAAAACTTATTTTTA+AGG - chr3_4:71449603-71449622 None:intergenic 25.0%
!!! CCTTTTTTTCTTTTCTTTTG+AGG - chr3_4:71449724-71449743 None:intergenic 25.0%
! CCTCAAAAGAAAAGAAAAAA+AGG + chr3_4:71449721-71449740 Msa0519400:intron 25.0%
!!! TTTAGGTTTTTCAGAAGTTT+AGG + chr3_4:71449844-71449863 Msa0519400:intron 25.0%
! CAATTGTCAAACATATTTCT+TGG + chr3_4:71449872-71449891 Msa0519400:intron 25.0%
!! ACAATAAAACCTGTATTTTG+TGG - chr3_4:71449964-71449983 None:intergenic 25.0%
!!! CTTGTTTTAAGGTCAATTAA+TGG + chr3_4:71450143-71450162 Msa0519400:intron 25.0%
! CATAAAACTAAAGCCTAATT+AGG + chr3_4:71450550-71450569 Msa0519400:intron 25.0%
!! AATTTACCATTTACCTTTTG+TGG - chr3_4:71450606-71450625 None:intergenic 25.0%
! CAAAAGGTAAATGGTAAATT+TGG + chr3_4:71450606-71450625 Msa0519400:intron 25.0%
!! GAATTAATATGCATTTGTTG+TGG + chr3_4:71450747-71450766 Msa0519400:intron 25.0%
!!! GAATTGAGTTTTATTTTCGT+TGG + chr3_4:71450769-71450788 Msa0519400:intron 25.0%
!!! ATTGAGTTTTATTTTCGTTG+GGG + chr3_4:71450771-71450790 Msa0519400:intron 25.0%
!!! AATTATGTTTTTGTGCAGAT+TGG + chr3_4:71450864-71450883 Msa0519400:intron 25.0%
!!! ATGAATTGAAGTTTTTGGTA+TGG + chr3_4:71450890-71450909 Msa0519400:intron 25.0%
! AAAACAACATCTTCTTTCTT+TGG + chr3_4:71446180-71446199 Msa0519400:CDS 25.0%
! AAACAACATCTTCTTTCTTT+GGG + chr3_4:71446181-71446200 Msa0519400:CDS 25.0%
!!! AGGCTTTTTTAAGAGTAATA+TGG - chr3_4:71451145-71451164 None:intergenic 25.0%
! TTTAACAGAAATGAAACTAG+AGG - chr3_4:71452023-71452042 None:intergenic 25.0%
! TACTACATTATCAACATCAA+TGG + chr3_4:71452054-71452073 Msa0519400:CDS 25.0%
!!! AAGAATAAAGTTTTGGTTTC+AGG + chr3_4:71452202-71452221 Msa0519400:CDS 25.0%
!!! AGAATAAAGTTTTGGTTTCA+GGG + chr3_4:71452203-71452222 Msa0519400:CDS 25.0%
!! TGGTTTCTATAATGTGATTT+TGG + chr3_4:71448073-71448092 Msa0519400:intron 25.0%
!!! TAATGTGATTTTGGAGAAAA+TGG + chr3_4:71453083-71453102 Msa0519400:CDS 25.0%
!! TCAGGTTTTATGTTGATATC+AGG - chr3_4:71446067-71446086 None:intergenic 30.0%
GTTATACTTCTCCTAACAAT+GGG + chr3_4:71446248-71446267 Msa0519400:CDS 30.0%
! ATATGGTTTTTCCCATTGTT+AGG - chr3_4:71446262-71446281 None:intergenic 30.0%
!! TATAGCTTTATTAACATCCC+CGG - chr3_4:71446791-71446810 None:intergenic 30.0%
CTGATTCAAATTTACTCACA+TGG - chr3_4:71446849-71446868 None:intergenic 30.0%
TTTAATGGAGAAGAATTCAG+AGG + chr3_4:71446921-71446940 Msa0519400:CDS 30.0%
!!! AAGAATCAAGTTTTGGTTTC+AGG + chr3_4:71447075-71447094 Msa0519400:intron 30.0%
!!! AGAATCAAGTTTTGGTTTCA+GGG + chr3_4:71447076-71447095 Msa0519400:intron 30.0%
AGTAACAATGTTGTCAAAAG+AGG + chr3_4:71447120-71447139 Msa0519400:CDS 30.0%
GTAACAATGTTGTCAAAAGA+GGG + chr3_4:71447121-71447140 Msa0519400:CDS 30.0%
TAACAATGTTGTCAAAAGAG+GGG + chr3_4:71447122-71447141 Msa0519400:CDS 30.0%
CGTGTTAATTTCAATATCAC+TGG + chr3_4:71447180-71447199 Msa0519400:CDS 30.0%
TTTCAATATCACTGGATTTG+AGG + chr3_4:71447188-71447207 Msa0519400:CDS 30.0%
TTGCACTTCAAAATTTCCTT+CGG - chr3_4:71447409-71447428 None:intergenic 30.0%
AACAGTATCGTTATTTGCTT+TGG - chr3_4:71447499-71447518 None:intergenic 30.0%
! CATATTTTGCAACAACATGT+TGG - chr3_4:71447633-71447652 None:intergenic 30.0%
AAAGAAGAGAAAGTTGAATG+TGG + chr3_4:71447935-71447954 Msa0519400:CDS 30.0%
! CAGATAAAGCATCAATAGTT+GGG - chr3_4:71447989-71448008 None:intergenic 30.0%
GAAAATGGGTAAAGTCATTT+CGG + chr3_4:71448097-71448116 Msa0519400:CDS 30.0%
ATATTGATACTGACACCATT+TGG + chr3_4:71448655-71448674 Msa0519400:intron 30.0%
! TTTAAAATAGACATCAGGTC+GGG - chr3_4:71448978-71448997 None:intergenic 30.0%
! ATTAACGACAAAGGTATAGT+TGG - chr3_4:71449052-71449071 None:intergenic 30.0%
AGATCTGTAAATCAGGAAAA+AGG + chr3_4:71449110-71449129 Msa0519400:intron 30.0%
!! AAATAAGGTATCGATGACAT+TGG - chr3_4:71449152-71449171 None:intergenic 30.0%
!! ATGTCATCGATACCTTATTT+TGG + chr3_4:71449152-71449171 Msa0519400:intron 30.0%
! TGGTATCAAAGTCTATTTTC+AGG - chr3_4:71449557-71449576 None:intergenic 30.0%
CTTTGATACCATGTTGAAAT+TGG + chr3_4:71449566-71449585 Msa0519400:intron 30.0%
AATTAGACCCAATTTCAACA+TGG - chr3_4:71449577-71449596 None:intergenic 30.0%
!! AAGTTTTATGGGGTTCTATT+AGG + chr3_4:71449610-71449629 Msa0519400:intron 30.0%
AACCTCTTAGAATTTATGGT+TGG - chr3_4:71449637-71449656 None:intergenic 30.0%
ACAATAAAACCTACCTTTGT+GGG - chr3_4:71449916-71449935 None:intergenic 30.0%
AACAATAAAACCTACCTTTG+TGG - chr3_4:71449917-71449936 None:intergenic 30.0%
AACCTAAATCCACAAAATAC+AGG + chr3_4:71449952-71449971 Msa0519400:intron 30.0%
! AACCTGTATTTTGTGGATTT+AGG - chr3_4:71449957-71449976 None:intergenic 30.0%
AGCAAAAAAAGAAGAGAAGT+AGG - chr3_4:71450068-71450087 None:intergenic 30.0%
TTAGAATTATTCCAAGAGTG+AGG + chr3_4:71450227-71450246 Msa0519400:intron 30.0%
TTAAAATGAATGACCAGACA+AGG - chr3_4:71450430-71450449 None:intergenic 30.0%
TACAAATTCTGTCCCTAATT+AGG - chr3_4:71450566-71450585 None:intergenic 30.0%
AAGGTAAATGGTAAATTTGG+AGG + chr3_4:71450609-71450628 Msa0519400:intron 30.0%
TTTACTTAAGATTCAAGGCT+TGG - chr3_4:71450640-71450659 None:intergenic 30.0%
CACTGTAATAAATCAAGCAT+AGG + chr3_4:71450681-71450700 Msa0519400:intron 30.0%
! GGTACATGAATTGAAGTTTT+TGG + chr3_4:71450885-71450904 Msa0519400:intron 30.0%
CTTTGGTACATTGACAAAAA+TGG + chr3_4:71451077-71451096 Msa0519400:CDS 30.0%
GTTATACTTCTCCTAACAAT+GGG + chr3_4:71446248-71446267 Msa0519400:CDS 30.0%
! ATATGGTTTTTCCCATTGTT+AGG - chr3_4:71446262-71446281 None:intergenic 30.0%
CGACAACAACATCAATATAT+TGG + chr3_4:71451429-71451448 Msa0519400:CDS 30.0%
CTCATTAGAAGTCAATTCAA+AGG - chr3_4:71451990-71452009 None:intergenic 30.0%
! CTTTGAATTGACTTCTAATG+AGG + chr3_4:71451988-71452007 Msa0519400:CDS 30.0%
CATTTCTGTTAAAAAAGCCA+CGG + chr3_4:71452030-71452049 Msa0519400:CDS 30.0%
TAAACCGGAAGTTACTAATT+CGG + chr3_4:71452102-71452121 Msa0519400:CDS 30.0%
!! AAAGGTATTCACTTGTTTCT+TGG + chr3_4:71452173-71452192 Msa0519400:CDS 30.0%
!!! AATTTTAATTTCACTCTCGC+TGG + chr3_4:71452307-71452326 Msa0519400:CDS 30.0%
!! ATTTGCTTCATAGTTTGCTT+CGG - chr3_4:71452464-71452483 None:intergenic 30.0%
GATACTGTTTGTTCTATTTG+TGG + chr3_4:71447510-71447529 Msa0519400:CDS 30.0%
! GTTTGTTCTATTTGTGGTTT+TGG + chr3_4:71452493-71452512 Msa0519400:CDS 30.0%
! CATATTTTGCAACAACAAGT+TGG - chr3_4:71452610-71452629 None:intergenic 30.0%
! GTACATTCTTGTTTACGTTT+AGG - chr3_4:71452640-71452659 None:intergenic 30.0%
AGGATATAAATCTAGTCACA+TGG + chr3_4:71452735-71452754 Msa0519400:CDS 30.0%
TATGTCTAAAGAAGCTATTG+TGG + chr3_4:71452815-71452834 Msa0519400:CDS 30.0%
! AATGTGAATAGTGATGATGA+TGG + chr3_4:71452883-71452902 Msa0519400:CDS 30.0%
! AAAGAAGCGTAAGTTAAATG+TGG + chr3_4:71452936-71452955 Msa0519400:CDS 30.0%
!!! CAAAATCTTTTGGTTTTGAG+AGG + chr3_4:71453301-71453320 Msa0519400:CDS 30.0%
AATCTTATCAAAGGCCATTT+AGG - chr3_4:71453414-71453433 None:intergenic 30.0%
!! GGTTTTATGTTGATATCAGG+AGG - chr3_4:71446064-71446083 None:intergenic 35.0%
!! AAGTGCTGGTAGAAAGAATT+TGG + chr3_4:71446147-71446166 Msa0519400:CDS 35.0%
AACATCTTCTTTCTTTGGGT+TGG + chr3_4:71446185-71446204 Msa0519400:CDS 35.0%
!!! TTTCTTTGGGTTGGAAGTTT+TGG + chr3_4:71446194-71446213 Msa0519400:intron 35.0%
CGTTATACTTCTCCTAACAA+TGG + chr3_4:71446247-71446266 Msa0519400:CDS 35.0%
!!! AATCTCTTTTTCAACCGTAG+TGG - chr3_4:71446379-71446398 None:intergenic 35.0%
TGTTGTTCTTTCTGTTTCCT+CGG - chr3_4:71446410-71446429 None:intergenic 35.0%
! GTCATCAGAAGTTGATTCAT+CGG - chr3_4:71446704-71446723 None:intergenic 35.0%
! ATCAGAAGTTGATTCAGAAC+TGG - chr3_4:71446746-71446765 None:intergenic 35.0%
TTCTGAATCAACTTCTGATG+AGG + chr3_4:71446747-71446766 Msa0519400:intron 35.0%
TGAATCAGAAGTTACGGATT+CGG + chr3_4:71446861-71446880 Msa0519400:intron 35.0%
AGGTAGTGATAAAAGAGGAA+AGG + chr3_4:71446885-71446904 Msa0519400:CDS 35.0%
AAGAAAAATTCAGAGGCTTC+TGG + chr3_4:71446985-71447004 Msa0519400:CDS 35.0%
!! GAAGGTATTCACTTGTTTCT+TGG + chr3_4:71447046-71447065 Msa0519400:intron 35.0%
AACAATGTTGTCAAAAGAGG+GGG + chr3_4:71447123-71447142 Msa0519400:CDS 35.0%
TTAGTTCACGTGATGAAAAG+CGG + chr3_4:71447298-71447317 Msa0519400:intron 35.0%
!! TGCAAGTAAATTCTGAAGCA+GGG + chr3_4:71447424-71447443 Msa0519400:CDS 35.0%
! TGTTCTATTTGTGATTTGGG+AGG + chr3_4:71447519-71447538 Msa0519400:CDS 35.0%
ACACATTCTTGCTTGCATTT+GGG - chr3_4:71447663-71447682 None:intergenic 35.0%
TACACATTCTTGCTTGCATT+TGG - chr3_4:71447664-71447683 None:intergenic 35.0%
! TCTTGTTTGTGTTCAATGTG+CGG + chr3_4:71447704-71447723 Msa0519400:CDS 35.0%
! TGTGCGGAAAAGTTTCATTT+TGG + chr3_4:71447720-71447739 Msa0519400:CDS 35.0%
! GTGCGGAAAAGTTTCATTTT+GGG + chr3_4:71447721-71447740 Msa0519400:CDS 35.0%
!! GTTTCATTTTGGGTGTGTAA+AGG + chr3_4:71447731-71447750 Msa0519400:CDS 35.0%
GTTGTTAGGGAAACCAATAA+CGG + chr3_4:71447851-71447870 Msa0519400:CDS 35.0%
! CCAGATAAAGCATCAATAGT+TGG - chr3_4:71447990-71448009 None:intergenic 35.0%
CCAACTATTGATGCTTTATC+TGG + chr3_4:71447987-71448006 Msa0519400:CDS 35.0%
CATAAACGCTTGAACTTTCA+TGG + chr3_4:71448053-71448072 Msa0519400:CDS 35.0%
TTGTCTTCGATATTGTTCCT+TGG - chr3_4:71448177-71448196 None:intergenic 35.0%
AAGGAACAATATCGAAGACA+AGG + chr3_4:71448176-71448195 Msa0519400:CDS 35.0%
AAATTGACACTTGTCTTCTC+TGG - chr3_4:71448330-71448349 None:intergenic 35.0%
TAGGTCTATTCAGGGATTTA+AGG - chr3_4:71448394-71448413 None:intergenic 35.0%
AACTACCATCAAGCAATACA+AGG - chr3_4:71448422-71448441 None:intergenic 35.0%
GGATCACAGCAAAACATAAA+AGG - chr3_4:71448586-71448605 None:intergenic 35.0%
CTCTATTCTCTAACACCAAA+TGG - chr3_4:71448673-71448692 None:intergenic 35.0%
CTGCATTTATGTCAAACTGT+TGG + chr3_4:71448852-71448871 Msa0519400:intron 35.0%
! AGGTCGGGTTGTATTTAATT+TGG - chr3_4:71448963-71448982 None:intergenic 35.0%
! ATTTTGTTCAGCTTCCAAGT+CGG - chr3_4:71449415-71449434 None:intergenic 35.0%
GAAAAACTCAAGTCTCATGT+TGG - chr3_4:71449474-71449493 None:intergenic 35.0%
TCAATAGTGTTAAACGTGAG+GGG - chr3_4:71449505-71449524 None:intergenic 35.0%
CTCAATAGTGTTAAACGTGA+GGG - chr3_4:71449506-71449525 None:intergenic 35.0%
ACGTTTAACACTATTGAGCT+TGG + chr3_4:71449508-71449527 Msa0519400:intron 35.0%
GTCCAACCATAAATTCTAAG+AGG + chr3_4:71449632-71449651 Msa0519400:intron 35.0%
ACTAAAACCTAAACCCACAA+AGG + chr3_4:71449900-71449919 Msa0519400:intron 35.0%
GAAAGAAACAGGAATAGAAG+GGG - chr3_4:71450000-71450019 None:intergenic 35.0%
GGAAAGAAACAGGAATAGAA+GGG - chr3_4:71450001-71450020 None:intergenic 35.0%
! GAAGGTTGACTCAATTGATA+AGG + chr3_4:71450260-71450279 Msa0519400:intron 35.0%
! AAGGAGTTGATTCATCAGTA+AGG + chr3_4:71450279-71450298 Msa0519400:intron 35.0%
CAACAGAGATACTTACAAAC+CGG - chr3_4:71450321-71450340 None:intergenic 35.0%
TAGTTTGATCCTTGAAAAGC+TGG - chr3_4:71450347-71450366 None:intergenic 35.0%
TCACATAAGGAGTGATAAAG+AGG - chr3_4:71450374-71450393 None:intergenic 35.0%
TTCATTTCAACATCCTTGTC+TGG + chr3_4:71450414-71450433 Msa0519400:intron 35.0%
GATAGGAACTCTATATCGAA+AGG + chr3_4:71450464-71450483 Msa0519400:intron 35.0%
ATCAAAGCATATGCCACAAA+AGG + chr3_4:71450590-71450609 Msa0519400:intron 35.0%
CATATGCCACAAAAGGTAAA+TGG + chr3_4:71450597-71450616 Msa0519400:intron 35.0%
!! TAAAGATAGTGCTGGTAGAA+AGG + chr3_4:71451007-71451026 Msa0519400:CDS 35.0%
AACATCTTCTTTCTTTGGGT+TGG + chr3_4:71446185-71446204 Msa0519400:CDS 35.0%
GGTACATTGACAAAAATGGT+AGG + chr3_4:71451081-71451100 Msa0519400:CDS 35.0%
ACATTGACAAAAATGGTAGG+AGG + chr3_4:71451084-71451103 Msa0519400:CDS 35.0%
CATTGACAAAAATGGTAGGA+GGG + chr3_4:71451085-71451104 Msa0519400:CDS 35.0%
CGTTATACTTCTCCTAACAA+TGG + chr3_4:71446247-71446266 Msa0519400:CDS 35.0%
ATTATTGTTGCTGCTGTTAC+TGG - chr3_4:71451224-71451243 None:intergenic 35.0%
! TTTTTCTCAACTACAGCTGA+AGG + chr3_4:71451313-71451332 Msa0519400:CDS 35.0%
! TCGCTCTTTAGAAAGTAAAC+AGG - chr3_4:71451387-71451406 None:intergenic 35.0%
GGTTTCTCTTTCAACTGTAA+TGG - chr3_4:71451725-71451744 None:intergenic 35.0%
CATCACTGATAAAAGAGCAA+CGG + chr3_4:71451855-71451874 Msa0519400:CDS 35.0%
!! TGTTGATAATGTAGTAACCG+TGG - chr3_4:71452050-71452069 None:intergenic 35.0%
GCATGTGATTCAATCTAAAC+CGG + chr3_4:71452087-71452106 Msa0519400:CDS 35.0%
GGGATGGTATTAAATAGAGA+AGG + chr3_4:71452142-71452161 Msa0519400:CDS 35.0%
! ATAGAGAAGGTATAAGGGAA+AGG + chr3_4:71452155-71452174 Msa0519400:CDS 35.0%
AGTCACAATGTTGTTACAAG+CGG + chr3_4:71452247-71452266 Msa0519400:CDS 35.0%
! AAGATACTAGTGGATGATGT+AGG - chr3_4:71452361-71452380 None:intergenic 35.0%
ATCATCCACTAGTATCTTCT+TGG + chr3_4:71452363-71452382 Msa0519400:CDS 35.0%
ATCTTCCAAGAAGATACTAG+TGG - chr3_4:71452371-71452390 None:intergenic 35.0%
ACTAGTATCTTCTTGGAAGA+TGG + chr3_4:71452370-71452389 Msa0519400:CDS 35.0%
!!! TGTTCTATTTGTGGTTTTGG+AGG + chr3_4:71452496-71452515 Msa0519400:CDS 35.0%
GATCAAGATCTAAACAACTG+AGG - chr3_4:71452561-71452580 None:intergenic 35.0%
TTTAGATCTTGATCGAGTTC+CGG + chr3_4:71452567-71452586 Msa0519400:CDS 35.0%
TGTGAGCAGAAATTTCACTT+TGG + chr3_4:71452697-71452716 Msa0519400:CDS 35.0%
GTGAGCAGAAATTTCACTTT+GGG + chr3_4:71452698-71452717 Msa0519400:CDS 35.0%
ATTTCACTTTGGGTGTGTAA+AGG + chr3_4:71452708-71452727 Msa0519400:CDS 35.0%
! CCAGTTAAAGCATCAATTGT+TGG - chr3_4:71452991-71453010 None:intergenic 35.0%
CCAACAATTGATGCTTTAAC+TGG + chr3_4:71452988-71453007 Msa0519400:CDS 35.0%
!! TGTGATTTTGGAGAAAATGG+AGG + chr3_4:71453086-71453105 Msa0519400:CDS 35.0%
GAAAATGGAGGAAGTGATTT+CGG + chr3_4:71453098-71453117 Msa0519400:CDS 35.0%
CTTGTGACCATAAATCCTTA+TGG - chr3_4:71453130-71453149 None:intergenic 35.0%
CATAAGGATTTATGGTCACA+AGG + chr3_4:71453128-71453147 Msa0519400:CDS 35.0%
TTGTCCTCGATGTTCTTTAT+TGG - chr3_4:71453178-71453197 None:intergenic 35.0%
AATAAAGAACATCGAGGACA+AGG + chr3_4:71453177-71453196 Msa0519400:CDS 35.0%
! GACACATGGACAAAATCTTT+TGG + chr3_4:71453291-71453310 Msa0519400:CDS 35.0%
TAGGTTTCTTCAGTGGTTTA+AGG - chr3_4:71453395-71453414 None:intergenic 35.0%
AACCACTGAAGAAACCTAAA+TGG + chr3_4:71453397-71453416 Msa0519400:CDS 35.0%
TACCATTCTCTTACAGCTTC+TGG - chr3_4:71446097-71446116 None:intergenic 40.0%
! CAAGATCGTAAAGAAAGTGC+TGG + chr3_4:71446133-71446152 Msa0519400:CDS 40.0%
AGAGTTGCATTGAAGAAGGA+GGG + chr3_4:71446302-71446321 Msa0519400:CDS 40.0%
CAATTTCTTCGTCTCCACTA+CGG + chr3_4:71446362-71446381 Msa0519400:CDS 40.0%
AAAGAGATTGAGAGAATCCG+AGG + chr3_4:71446390-71446409 Msa0519400:CDS 40.0%
GGTAGCTCTTTCGATTGTAA+AGG - chr3_4:71446511-71446530 None:intergenic 40.0%
!! GATTCTGAAACCTCTAGTTC+CGG + chr3_4:71446769-71446788 Msa0519400:intron 40.0%
!! ATTCTGAAACCTCTAGTTCC+GGG + chr3_4:71446770-71446789 Msa0519400:intron 40.0%
AGGTACGGTATCAACATCAA+TGG + chr3_4:71446813-71446832 Msa0519400:intron 40.0%
TCGGTAGGTAGTGATAAAAG+AGG + chr3_4:71446880-71446899 Msa0519400:CDS 40.0%
GAGAAGAATTCAGAGGATTG+TGG + chr3_4:71446928-71446947 Msa0519400:CDS 40.0%
!! GAAAGGGAAGGTATCAAAGA+CGG + chr3_4:71447011-71447030 Msa0519400:CDS 40.0%
!! AGAGGGGGTTTATTTTCTGA+TGG + chr3_4:71447138-71447157 Msa0519400:CDS 40.0%
ACCATCCACTAGTATCTTGT+TGG + chr3_4:71447236-71447255 Msa0519400:CDS 40.0%
CCATCCACTAGTATCTTGTT+GGG + chr3_4:71447237-71447256 Msa0519400:CDS 40.0%
ATCTCCCAACAAGATACTAG+TGG - chr3_4:71447244-71447263 None:intergenic 40.0%
ACTAGTATCTTGTTGGGAGA+TGG + chr3_4:71447243-71447262 Msa0519400:CDS 40.0%
!! CTGAAGCAAATTCTGAAGCA+GGG + chr3_4:71447334-71447353 Msa0519400:intron 40.0%
!! GTGCAAGTAAATTCTGAAGC+AGG + chr3_4:71447423-71447442 Msa0519400:CDS 40.0%
CCCTACTTCAGAATTTCCTT+CGG - chr3_4:71447463-71447482 None:intergenic 40.0%
!! CCGAAGGAAATTCTGAAGTA+GGG + chr3_4:71447460-71447479 Msa0519400:CDS 40.0%
TGCAAGCAAGAATGTGTAGA+TGG + chr3_4:71447666-71447685 Msa0519400:CDS 40.0%
! ATTCTTCTTTTCACCACTGC+TGG - chr3_4:71447784-71447803 None:intergenic 40.0%
GCAGTGGTGAAAAGAAGAAT+TGG + chr3_4:71447784-71447803 Msa0519400:CDS 40.0%
!! TGGTTTTGCAGTGTAGTTTG+TGG + chr3_4:71447804-71447823 Msa0519400:intron 40.0%
! AGATTAGCTGCAACCGTTAT+TGG - chr3_4:71447867-71447886 None:intergenic 40.0%
!!! CAAAAGCGTTTGGTTTTGCT+AGG + chr3_4:71448300-71448319 Msa0519400:intron 40.0%
AATCCCTGAATAGACCTACA+TGG + chr3_4:71448396-71448415 Msa0519400:intron 40.0%
AAGGGAGAGGAACACAATTA+TGG + chr3_4:71448709-71448728 Msa0519400:intron 40.0%
AAAGTGCAAGTGAAACACCA+AGG + chr3_4:71448735-71448754 Msa0519400:intron 40.0%
! TTAAACGTGAGGGGTGTATT+GGG - chr3_4:71449496-71449515 None:intergenic 40.0%
GCTCAATAGTGTTAAACGTG+AGG - chr3_4:71449507-71449526 None:intergenic 40.0%
!! GCTTGGTGCGTTGATATAAA+TGG + chr3_4:71449525-71449544 Msa0519400:intron 40.0%
! TGGTGCGTTGATATAAATGG+TGG + chr3_4:71449528-71449547 Msa0519400:intron 40.0%
AAACCTAAACCCACAAAGGT+AGG + chr3_4:71449904-71449923 Msa0519400:intron 40.0%
AAACCTACCTTTGTGGGTTT+AGG - chr3_4:71449910-71449929 None:intergenic 40.0%
GGGAAAGAAACAGGAATAGA+AGG - chr3_4:71450002-71450021 None:intergenic 40.0%
GAGAGGAAAGAGAAACAGAA+CGG - chr3_4:71450030-71450049 None:intergenic 40.0%
AAAACACCATGACACAAGCA+AGG - chr3_4:71450114-71450133 None:intergenic 40.0%
TATCACTCCTTATGTGATCG+AGG + chr3_4:71450377-71450396 Msa0519400:intron 40.0%
AGGCACTATGTTCATATCAG+GGG - chr3_4:71450931-71450950 None:intergenic 40.0%
CAGGCACTATGTTCATATCA+GGG - chr3_4:71450932-71450951 None:intergenic 40.0%
TCAGGCACTATGTTCATATC+AGG - chr3_4:71450933-71450952 None:intergenic 40.0%
GATCTTGTAGTCCTGTTAAG+CGG - chr3_4:71450986-71451005 None:intergenic 40.0%
CAAGATCGTAAAGATAGTGC+TGG + chr3_4:71450999-71451018 Msa0519400:CDS 40.0%
!! TTTCTTTGGGTTGGAAGCTT+TGG + chr3_4:71451060-71451079 Msa0519400:CDS 40.0%
AGAGTTGCATTGAAGAAGGA+GGG + chr3_4:71446302-71446321 Msa0519400:CDS 40.0%
AGTTGCTCATTCGACTGTAA+TGG - chr3_4:71451458-71451477 None:intergenic 40.0%
! CGTTGCTCTTTTATCAGTGA+TGG - chr3_4:71451857-71451876 None:intergenic 40.0%
!!! GGTTGCTTTTTCGACTGTAA+TGG - chr3_4:71451923-71451942 None:intergenic 40.0%
GTCACAATGTTGTTACAAGC+GGG + chr3_4:71452248-71452267 Msa0519400:CDS 40.0%
!! AGCGGGAGTATATTTTGTGA+TGG + chr3_4:71452265-71452284 Msa0519400:CDS 40.0%
TTTCACTCTCGCTGGATTTA+AGG + chr3_4:71452315-71452334 Msa0519400:CDS 40.0%
GTATCTTCTTGGAAGATGGA+AGG + chr3_4:71452374-71452393 Msa0519400:CDS 40.0%
GTCGTTGTTGGAATGTCAAA+GGG + chr3_4:71452396-71452415 Msa0519400:CDS 40.0%
CAAGATCTAAACAACTGAGG+TGG - chr3_4:71452558-71452577 None:intergenic 40.0%
GCTATTGTGGAAACCAGTTA+AGG + chr3_4:71452828-71452847 Msa0519400:CDS 40.0%
AGATTATCCGCAACCTTAAC+TGG - chr3_4:71452844-71452863 None:intergenic 40.0%
AGGTTGCGGATAATCTAACT+TGG + chr3_4:71452848-71452867 Msa0519400:CDS 40.0%
!! GTGAATAGTGATGATGATGG+CGG + chr3_4:71452886-71452905 Msa0519400:CDS 40.0%
! CATAAGCGCTTGAACTTTTG+TGG + chr3_4:71453054-71453073 Msa0519400:CDS 40.0%
GTGGCTACCATAAGGATTTA+TGG + chr3_4:71453120-71453139 Msa0519400:CDS 40.0%
TCCTCGATGTTCTTTATTGG+TGG - chr3_4:71453175-71453194 None:intergenic 40.0%
!! GAGAAACAATTGACTCGCTT+TGG + chr3_4:71453228-71453247 Msa0519400:CDS 40.0%
!!! TTTGGTTTTGAGAGGATGAC+AGG + chr3_4:71453309-71453328 Msa0519400:CDS 40.0%
GTCCAGAAGCTGTAAGAGAA+TGG + chr3_4:71446092-71446111 Msa0519400:CDS 45.0%
AGAGAATGGTACCGCTTAAC+AGG + chr3_4:71446106-71446125 Msa0519400:CDS 45.0%
GAGAATGGTACCGCTTAACA+GGG + chr3_4:71446107-71446126 Msa0519400:CDS 45.0%
GATCTTGTAGCCCTGTTAAG+CGG - chr3_4:71446120-71446139 None:intergenic 45.0%
TTCTTCAATGCAACTCTCGC+AGG - chr3_4:71446299-71446318 None:intergenic 45.0%
TGCGAGAGTTGCATTGAAGA+AGG + chr3_4:71446298-71446317 Msa0519400:CDS 45.0%
GAGAGTTGCATTGAAGAAGG+AGG + chr3_4:71446301-71446320 Msa0519400:CDS 45.0%
ACGTTGTTGCTGCAGTTGAA+GGG - chr3_4:71446342-71446361 None:intergenic 45.0%
!!! GGTCTCTTTTTCGACTGCAA+TGG - chr3_4:71446445-71446464 None:intergenic 45.0%
AAAGAGACCGAGAGAATCTG+AGG + chr3_4:71446456-71446475 Msa0519400:CDS 45.0%
! GCTGTTTCCTCAGATTCTCT+CGG - chr3_4:71446466-71446485 None:intergenic 45.0%
TACAATCGAAAGAGCTACCG+AGG + chr3_4:71446512-71446531 Msa0519400:CDS 45.0%
ACAATCGAAAGAGCTACCGA+GGG + chr3_4:71446513-71446532 Msa0519400:CDS 45.0%
CAGCAGCGACATCAATCTAT+TGG + chr3_4:71446548-71446567 Msa0519400:CDS 45.0%
TCTCTCGGTTTCTCTTTCGA+CGG - chr3_4:71446583-71446602 None:intergenic 45.0%
AGAGAAACCGAGAGAATCCA+AGG + chr3_4:71446588-71446607 Msa0519400:CDS 45.0%
! TGATATTGCTGCTGCTTCCT+CGG - chr3_4:71446668-71446687 None:intergenic 45.0%
TGATTCAGAACTGGCACTAG+AGG - chr3_4:71446737-71446756 None:intergenic 45.0%
!! TTCTGAAACCTCTAGTTCCG+GGG + chr3_4:71446771-71446790 Msa0519400:intron 45.0%
ATTAACATCCCCGGAACTAG+AGG - chr3_4:71446782-71446801 None:intergenic 45.0%
! TCAGAAGTTACGGATTCGGT+AGG + chr3_4:71446865-71446884 Msa0519400:intron 45.0%
TCAGAGGATTGTGGTAGAAG+AGG + chr3_4:71446937-71446956 Msa0519400:CDS 45.0%
CAGAGGATTGTGGTAGAAGA+GGG + chr3_4:71446938-71446957 Msa0519400:CDS 45.0%
TCAGAGGCTTCTGGTAAGAA+AGG + chr3_4:71446994-71447013 Msa0519400:CDS 45.0%
CAGAGGCTTCTGGTAAGAAA+GGG + chr3_4:71446995-71447014 Msa0519400:CDS 45.0%
TCAAAGACGGAAGGTGAAAG+AGG + chr3_4:71447024-71447043 Msa0519400:CDS 45.0%
GGGACTAATGTATTCTGTCG+TGG + chr3_4:71447096-71447115 Msa0519400:CDS 45.0%
CCCAACAAGATACTAGTGGA+TGG - chr3_4:71447240-71447259 None:intergenic 45.0%
GTATCTTGTTGGGAGATGGA+AGG + chr3_4:71447247-71447266 Msa0519400:CDS 45.0%
GTCGTTGTTGGACTGTCAAA+GGG + chr3_4:71447269-71447288 Msa0519400:CDS 45.0%
!! GCTGAAGCAAATTCTGAAGC+AGG + chr3_4:71447333-71447352 Msa0519400:intron 45.0%
TGCCCAAGTAAATTCTGACG+CGG + chr3_4:71447368-71447387 Msa0519400:CDS 45.0%
GGGAATCATTATGTTGCCGA+AGG + chr3_4:71447390-71447409 Msa0519400:CDS 45.0%
!! GCCGAAGGAAATTCTGAAGT+AGG + chr3_4:71447459-71447478 Msa0519400:CDS 45.0%
GCATTCCACCTCAGTTGTTT+AGG + chr3_4:71447573-71447592 Msa0519400:intron 45.0%
GATCGAGACCTAAACAACTG+AGG - chr3_4:71447584-71447603 None:intergenic 45.0%
TTTAGGTCTCGATCGAGTTC+CGG + chr3_4:71447590-71447609 Msa0519400:intron 45.0%
!! TTTGGGTGTGTAAAGGCGTT+AGG + chr3_4:71447738-71447757 Msa0519400:CDS 45.0%
!! TGTGTAAAGGCGTTAGGACT+TGG + chr3_4:71447744-71447763 Msa0519400:CDS 45.0%
CGGTTGCAGCTAATCTAACT+TGG + chr3_4:71447871-71447890 Msa0519400:CDS 45.0%
GGTAGCCACGAAAACTATCT+CGG - chr3_4:71448156-71448175 None:intergenic 45.0%
! GATAGTTTTCGTGGCTACCA+AGG + chr3_4:71448157-71448176 Msa0519400:CDS 45.0%
GAGAAACAGTTGACACGCTT+AGG + chr3_4:71448227-71448246 Msa0519400:CDS 45.0%
ACGCTTAGGAGTTGAAAGCT+TGG + chr3_4:71448241-71448260 Msa0519400:CDS 45.0%
CCATGTGTCTATAGCATCCT+CGG - chr3_4:71448279-71448298 None:intergenic 45.0%
!! GACACATGGACAAAAGCGTT+TGG + chr3_4:71448290-71448309 Msa0519400:CDS 45.0%
AGGCCATGTAGGTCTATTCA+GGG - chr3_4:71448402-71448421 None:intergenic 45.0%
AAGGCCATGTAGGTCTATTC+AGG - chr3_4:71448403-71448422 None:intergenic 45.0%
CAAGCAATACAAGGCCATGT+AGG - chr3_4:71448413-71448432 None:intergenic 45.0%
!! CATGGCCTTGTATTGCTTGA+TGG + chr3_4:71448414-71448433 Msa0519400:intron 45.0%
AGTACCATCGTCGAGCAAAA+GGG + chr3_4:71448691-71448710 Msa0519400:intron 45.0%
TGTTGCACGACAAAACACCT+TGG - chr3_4:71448755-71448774 None:intergenic 45.0%
ACATCCTCACAAAACCGACT+TGG + chr3_4:71449398-71449417 Msa0519400:intron 45.0%
! GTTAAACGTGAGGGGTGTAT+TGG - chr3_4:71449497-71449516 None:intergenic 45.0%
AGGAAAGAGAAACAGAACGG+CGG - chr3_4:71450027-71450046 None:intergenic 45.0%
AAGTAGGCTTACATGCATGC+AGG - chr3_4:71450052-71450071 None:intergenic 45.0%
CTCATACCTTGCTTGTGTCA+TGG + chr3_4:71450105-71450124 Msa0519400:intron 45.0%
TTGAGTCAACCTTCGTTGAC+TGG - chr3_4:71450254-71450273 None:intergenic 45.0%
GAAACCACCTCGATCACATA+AGG - chr3_4:71450387-71450406 None:intergenic 45.0%
GGCACTATGTTCATATCAGG+GGG - chr3_4:71450930-71450949 None:intergenic 45.0%
GTCCAGAAGCTGTAAGAGAA+TGG + chr3_4:71446092-71446111 Msa0519400:CDS 45.0%
CACCATTCTCTTACAGCTTC+TGG - chr3_4:71450963-71450982 None:intergenic 45.0%
TTCTTCAATGCAACTCTCGC+AGG - chr3_4:71446299-71446318 None:intergenic 45.0%
TGCGAGAGTTGCATTGAAGA+AGG + chr3_4:71446298-71446317 Msa0519400:CDS 45.0%
GAGAGTTGCATTGAAGAAGG+AGG + chr3_4:71446301-71446320 Msa0519400:CDS 45.0%
!! TGCAGTTGAAGGGTGTTTGA+GGG - chr3_4:71451198-71451217 None:intergenic 45.0%
!! TTACTGGTGCTGCAGTTGAA+GGG - chr3_4:71451208-71451227 None:intergenic 45.0%
! TGTTGTTGTCGCTTCTTCCT+CGG - chr3_4:71451420-71451439 None:intergenic 45.0%
AGTCGCTCTTTCGACTGTAA+TGG - chr3_4:71451527-71451546 None:intergenic 45.0%
ACTGATACCTCGGATTCCTT+CGG - chr3_4:71451614-71451633 None:intergenic 45.0%
TCCTCTTGCTACTGATACCT+CGG - chr3_4:71451624-71451643 None:intergenic 45.0%
AGTCGCTCAATCGACTGAAA+TGG - chr3_4:71451659-71451678 None:intergenic 45.0%
AGAGAAACCGAGAGAATCTG+AGG + chr3_4:71451736-71451755 Msa0519400:CDS 45.0%
ACTGCTTCCTCAGATTCTCT+CGG - chr3_4:71451746-71451765 None:intergenic 45.0%
AGTCGCTCTTTCGACTGTAA+TGG - chr3_4:71451527-71451546 None:intergenic 45.0%
AAAGCAACCAAGTGAATCCG+AGG + chr3_4:71451934-71451953 Msa0519400:CDS 45.0%
ACCGGAAGTTACTAATTCGG+TGG + chr3_4:71452105-71452124 Msa0519400:CDS 45.0%
CCCACCGAATTAGTAACTTC+CGG - chr3_4:71452109-71452128 None:intergenic 45.0%
CCGGAAGTTACTAATTCGGT+GGG + chr3_4:71452106-71452125 Msa0519400:CDS 45.0%
! GTTACTAATTCGGTGGGTAG+TGG + chr3_4:71452112-71452131 Msa0519400:CDS 45.0%
GGTCGTTGTTGGAATGTCAA+AGG + chr3_4:71452395-71452414 Msa0519400:CDS 45.0%
CAACTGAGGTGGAATACAGA+AGG - chr3_4:71452547-71452566 None:intergenic 45.0%
TTTGGGTGTGTAAAGGCAAC+AGG + chr3_4:71452715-71452734 Msa0519400:CDS 45.0%
! GCAATATAGTTTGCGCGAAC+AGG + chr3_4:71452788-71452807 Msa0519400:CDS 45.0%
GTGGAAACCAGTTAAGGTTG+CGG + chr3_4:71452834-71452853 Msa0519400:CDS 45.0%
AATGGAGGAAGTGATTTCGG+TGG + chr3_4:71453101-71453120 Msa0519400:CDS 45.0%
TGATTTCGGTGGCTACCATA+AGG + chr3_4:71453112-71453131 Msa0519400:CDS 45.0%
! GGTTGCTGAGATAGTTTTCG+TGG + chr3_4:71453149-71453168 Msa0519400:CDS 45.0%
GCCACCAATAAAGAACATCG+AGG + chr3_4:71453171-71453190 Msa0519400:CDS 45.0%
! AGGAATGCGTCGTTTGTTGA+TGG + chr3_4:71453197-71453216 Msa0519400:CDS 45.0%
!! TCGCTTTGGAGTAGAAAGCA+TGG + chr3_4:71453242-71453261 Msa0519400:CDS 45.0%
!! CATGGTTTTGCATTCATCCG+AGG + chr3_4:71453260-71453279 Msa0519400:CDS 45.0%
CCATGTGTCTATAGCATCCT+CGG - chr3_4:71448279-71448298 None:intergenic 45.0%
! GGCCATTTAGGTTTCTTCAG+TGG - chr3_4:71453402-71453421 None:intergenic 45.0%
!!! AAAACATATAATTATTTTTA+AGG + chr3_4:71449305-71449324 Msa0519400:intron 5.0%
ACAGCTTCTGGACAATGCTC+AGG - chr3_4:71446085-71446104 None:intergenic 50.0%
GACGTTGTTGCTGCAGTTGA+AGG - chr3_4:71446343-71446362 None:intergenic 50.0%
GGTTTCTCTTTCGACGGCAA+TGG - chr3_4:71446577-71446596 None:intergenic 50.0%
GAAACCGAGAGAATCCAAGG+AGG + chr3_4:71446591-71446610 Msa0519400:CDS 50.0%
GCTTCCTCCTTGGATTCTCT+CGG - chr3_4:71446598-71446617 None:intergenic 50.0%
! GATTCACTCGGTCGCTTTGA+CGG - chr3_4:71446646-71446665 None:intergenic 50.0%
TGGCACTAGAGGCTTCAGAA+TGG - chr3_4:71446726-71446745 None:intergenic 50.0%
GGCTTCTGGTAAGAAAGGGA+AGG + chr3_4:71446999-71447018 Msa0519400:CDS 50.0%
!! GGGAAGGTATCAAAGACGGA+AGG + chr3_4:71447015-71447034 Msa0519400:CDS 50.0%
AGACGGAAGGTGAAAGAGGA+AGG + chr3_4:71447028-71447047 Msa0519400:CDS 50.0%
! ACTGGATTTGAGGCTCATGC+TGG + chr3_4:71447198-71447217 Msa0519400:CDS 50.0%
GGTCGTTGTTGGACTGTCAA+AGG + chr3_4:71447268-71447287 Msa0519400:CDS 50.0%
GCCCAAGTAAATTCTGACGC+GGG + chr3_4:71447369-71447388 Msa0519400:CDS 50.0%
CCCCGCGTCAGAATTTACTT+GGG - chr3_4:71447373-71447392 None:intergenic 50.0%
CCCAAGTAAATTCTGACGCG+GGG + chr3_4:71447370-71447389 Msa0519400:CDS 50.0%
TCCCCGCGTCAGAATTTACT+TGG - chr3_4:71447374-71447393 None:intergenic 50.0%
GGGAATCATTCTGTTGCCGA+AGG + chr3_4:71447444-71447463 Msa0519400:CDS 50.0%
CAACTGAGGTGGAATGCAGA+AGG - chr3_4:71447570-71447589 None:intergenic 50.0%
CGAGACCTAAACAACTGAGG+TGG - chr3_4:71447581-71447600 None:intergenic 50.0%
ATCGAGTTCCGGATGGAGAT+TGG + chr3_4:71447601-71447620 Msa0519400:CDS 50.0%
GGACAGAACCAATCTCCATC+CGG - chr3_4:71447612-71447631 None:intergenic 50.0%
TCAAGTCACATTGCCAGCAG+TGG + chr3_4:71447768-71447787 Msa0519400:CDS 50.0%
! GGTTGCCGAGATAGTTTTCG+TGG + chr3_4:71448148-71448167 Msa0519400:CDS 50.0%
!!! CTTGGTTTTGCATTCCTCCG+AGG + chr3_4:71448259-71448278 Msa0519400:CDS 50.0%
TGTGTCTATAGCATCCTCGG+AGG - chr3_4:71448276-71448295 None:intergenic 50.0%
CCGAGGATGCTATAGACACA+TGG + chr3_4:71448276-71448295 Msa0519400:CDS 50.0%
GAGTACCATCGTCGAGCAAA+AGG + chr3_4:71448690-71448709 Msa0519400:intron 50.0%
!! GCTTCCAAGTCGGTTTTGTG+AGG - chr3_4:71449405-71449424 None:intergenic 50.0%
AGAGAAACAGAACGGCGGTA+GGG - chr3_4:71450022-71450041 None:intergenic 50.0%
AAGAGAAACAGAACGGCGGT+AGG - chr3_4:71450023-71450042 None:intergenic 50.0%
AGGTCGTGTTCAACTCTTGC+CGG + chr3_4:71450299-71450318 Msa0519400:intron 50.0%
! CTGTTGCTGCCAGCTTTTCA+AGG + chr3_4:71450335-71450354 Msa0519400:intron 50.0%
CACTCCTTATGTGATCGAGG+TGG + chr3_4:71450380-71450399 Msa0519400:intron 50.0%
ACAGCTTCTGGACAATGCTC+AGG - chr3_4:71446085-71446104 None:intergenic 50.0%
!! AGAGAATGGTGCCGCTTAAC+AGG + chr3_4:71450972-71450991 Msa0519400:CDS 50.0%
!! CTGCAGTTGAAGGGTGTTTG+AGG - chr3_4:71451199-71451218 None:intergenic 50.0%
!! GTTACTGGTGCTGCAGTTGA+AGG - chr3_4:71451209-71451228 None:intergenic 50.0%
!!! GGTCGCTTTTTCGACTGTGA+TGG - chr3_4:71451257-71451276 None:intergenic 50.0%
AAAGCGACCTAGAGAATCCG+AGG + chr3_4:71451268-71451287 Msa0519400:CDS 50.0%
ACTGCTTCCTCGGATTCTCT+AGG - chr3_4:71451278-71451297 None:intergenic 50.0%
TGCTCTAGCTACTGCTTCCT+CGG - chr3_4:71451288-71451307 None:intergenic 50.0%
GGAGCGACAGAGAAAATCTG+AGG + chr3_4:71451334-71451353 Msa0519400:CDS 50.0%
GCTTCTTCCTCGGATTCTCT+TGG - chr3_4:71451410-71451429 None:intergenic 50.0%
TGAGCAACTGAGAGAATCCG+TGG + chr3_4:71451469-71451488 Msa0519400:CDS 50.0%
! TGTTGTTGCTGCTGCTTCCA+CGG - chr3_4:71451489-71451508 None:intergenic 50.0%
AGAGCGACTGAGAGAATCTG+AGG + chr3_4:71451538-71451557 Msa0519400:CDS 50.0%
GGTTGCACTTTCAGCTGGAA+TGG - chr3_4:71451593-71451612 None:intergenic 50.0%
! TCCGAGGTATCAGTAGCAAG+AGG + chr3_4:71451620-71451639 Msa0519400:CDS 50.0%
!! ATTGAGCGACTGAGAGCATC+TGG + chr3_4:71451668-71451687 Msa0519400:CDS 50.0%
! TGCTATTGCTGCTGCTTCCT+CGG - chr3_4:71451954-71451973 None:intergenic 50.0%
! TCGGTGGGTAGTGGTAAAAG+AGG + chr3_4:71452121-71452140 Msa0519400:CDS 50.0%
! CGGTGGGTAGTGGTAAAAGA+GGG + chr3_4:71452122-71452141 Msa0519400:CDS 50.0%
! GGGTAGTGGTAAAAGAGGGA+TGG + chr3_4:71452126-71452145 Msa0519400:CDS 50.0%
GCTGGATTTAAGGATCACGC+TGG + chr3_4:71452325-71452344 Msa0519400:CDS 50.0%
GGAAGATGGAAGGTCGTTGT+TGG + chr3_4:71452384-71452403 Msa0519400:CDS 50.0%
GATCTTGATCGAGTTCCGGA+TGG + chr3_4:71452571-71452590 Msa0519400:CDS 50.0%
ATCGAGTTCCGGATGGTGAT+TGG + chr3_4:71452578-71452597 Msa0519400:CDS 50.0%
GGACAGAACCAATCACCATC+CGG - chr3_4:71452589-71452608 None:intergenic 50.0%
CCGAGGATGCTATAGACACA+TGG + chr3_4:71448276-71448295 Msa0519400:CDS 50.0%
!! TGCTGCAGTTGAAGGGCGTT+CGG - chr3_4:71446335-71446354 None:intergenic 55.0%
! TGATGTCGCTGCTGCTTCCT+GGG - chr3_4:71446542-71446561 None:intergenic 55.0%
! TTGATGTCGCTGCTGCTTCC+TGG - chr3_4:71446543-71446562 None:intergenic 55.0%
! AGTTGCTGCTGCTTCCTCCT+TGG - chr3_4:71446608-71446627 None:intergenic 55.0%
AAAGCGACCGAGTGAATCCG+AGG + chr3_4:71446648-71446667 Msa0519400:intron 55.0%
GCTGCTTCCTCGGATTCACT+CGG - chr3_4:71446658-71446677 None:intergenic 55.0%
GGGAGATGGAAGGTCGTTGT+TGG + chr3_4:71447257-71447276 Msa0519400:CDS 55.0%
! CTCTCCCTTTTGCTCGACGA+TGG - chr3_4:71448698-71448717 None:intergenic 55.0%
CATCGTCGAGCAAAAGGGAG+AGG + chr3_4:71448696-71448715 Msa0519400:intron 55.0%
ACGGCGGTAGGGAAAGAAAC+AGG - chr3_4:71450011-71450030 None:intergenic 55.0%
GGCTTACATGCATGCAGGAG+AGG - chr3_4:71450047-71450066 None:intergenic 55.0%
! CGTTGACTGGTCCTCACTCT+TGG - chr3_4:71450241-71450260 None:intergenic 55.0%
GAGTGAGGACCAGTCAACGA+AGG + chr3_4:71450242-71450261 Msa0519400:intron 55.0%
AGAGCGACCAAGAGAATCCG+AGG + chr3_4:71451400-71451419 Msa0519400:CDS 55.0%
CCTTCGGTTGCACTTTCAGC+TGG - chr3_4:71451598-71451617 None:intergenic 55.0%
! CCAGCTGAAAGTGCAACCGA+AGG + chr3_4:71451595-71451614 Msa0519400:CDS 55.0%
AGTGCAACCGAAGGAATCCG+AGG + chr3_4:71451604-71451623 Msa0519400:CDS 55.0%
AGAGCGACTGAGAGAATGCG+AGG + chr3_4:71451802-71451821 Msa0519400:CDS 55.0%
GCTGCTTCCTCGGATTCACT+TGG - chr3_4:71446658-71446677 None:intergenic 55.0%
GGGACTAATGTGCTCTGTCG+TGG + chr3_4:71452223-71452242 Msa0519400:CDS 55.0%
!! TGCAGTTGAAGGGCGTTCGG+GGG - chr3_4:71446332-71446351 None:intergenic 60.0%
!! CTGCAGTTGAAGGGCGTTCG+GGG - chr3_4:71446333-71446352 None:intergenic 60.0%
!! GCTGCAGTTGAAGGGCGTTC+GGG - chr3_4:71446334-71446353 None:intergenic 60.0%
AGAGCTACCGAGGGAATCCC+AGG + chr3_4:71446522-71446541 Msa0519400:CDS 60.0%
GCTGCTTCCTGGGATTCCCT+CGG - chr3_4:71446532-71446551 None:intergenic 60.0%
GGTCTCGATCGAGTTCCGGA+TGG + chr3_4:71447594-71447613 Msa0519400:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 71446043 71453458 71446043 ID=Msa0519400;Name=Msa0519400
chr3_4 mRNA 71446043 71453458 71446043 ID=Msa0519400-mRNA-1;Parent=Msa0519400;Name=Msa0519400-mRNA-1;_AED=0.06;_eAED=0.10;_QI=0|0|0|1|0|0|10|0|1469
chr3_4 exon 71446043 71446209 71446043 ID=Msa0519400-mRNA-1:exon:19634;Parent=Msa0519400-mRNA-1
chr3_4 exon 71446234 71446437 71446234 ID=Msa0519400-mRNA-1:exon:19635;Parent=Msa0519400-mRNA-1
chr3_4 exon 71446451 71446644 71446451 ID=Msa0519400-mRNA-1:exon:19636;Parent=Msa0519400-mRNA-1
chr3_4 exon 71446869 71447059 71446869 ID=Msa0519400-mRNA-1:exon:19637;Parent=Msa0519400-mRNA-1
chr3_4 exon 71447078 71447306 71447078 ID=Msa0519400-mRNA-1:exon:19638;Parent=Msa0519400-mRNA-1
chr3_4 exon 71447340 71447585 71447340 ID=Msa0519400-mRNA-1:exon:19639;Parent=Msa0519400-mRNA-1
chr3_4 exon 71447595 71447818 71447595 ID=Msa0519400-mRNA-1:exon:19640;Parent=Msa0519400-mRNA-1
chr3_4 exon 71447849 71448074 71447849 ID=Msa0519400-mRNA-1:exon:19641;Parent=Msa0519400-mRNA-1
chr3_4 exon 71448096 71448311 71448096 ID=Msa0519400-mRNA-1:exon:19642;Parent=Msa0519400-mRNA-1
chr3_4 exon 71450946 71453458 71450946 ID=Msa0519400-mRNA-1:exon:19643;Parent=Msa0519400-mRNA-1
chr3_4 CDS 71446043 71446209 71446043 ID=Msa0519400-mRNA-1:cds;Parent=Msa0519400-mRNA-1
chr3_4 CDS 71446234 71446437 71446234 ID=Msa0519400-mRNA-1:cds;Parent=Msa0519400-mRNA-1
chr3_4 CDS 71446451 71446644 71446451 ID=Msa0519400-mRNA-1:cds;Parent=Msa0519400-mRNA-1
chr3_4 CDS 71446869 71447059 71446869 ID=Msa0519400-mRNA-1:cds;Parent=Msa0519400-mRNA-1
chr3_4 CDS 71447078 71447306 71447078 ID=Msa0519400-mRNA-1:cds;Parent=Msa0519400-mRNA-1
chr3_4 CDS 71447340 71447585 71447340 ID=Msa0519400-mRNA-1:cds;Parent=Msa0519400-mRNA-1
chr3_4 CDS 71447595 71447818 71447595 ID=Msa0519400-mRNA-1:cds;Parent=Msa0519400-mRNA-1
chr3_4 CDS 71447849 71448074 71447849 ID=Msa0519400-mRNA-1:cds;Parent=Msa0519400-mRNA-1
chr3_4 CDS 71448096 71448311 71448096 ID=Msa0519400-mRNA-1:cds;Parent=Msa0519400-mRNA-1
chr3_4 CDS 71450946 71453458 71450946 ID=Msa0519400-mRNA-1:cds;Parent=Msa0519400-mRNA-1
Gene Sequence

>Msa0519400

ATGGATTCTCGTTCACTACCTCCTGATATCAACATAAAACCTGAGCATTGTCCAGAAGCTGTAAGAGAATGGTACCGCTTAACAGGGCTACAAGATCGTAAAGAAAGTGCTGGTAGAAAGAATTTGGCTTTGAAAGCAAAACAACATCTTCTTTCTTTGGGTTGGAATAAGTGGGAATTGCGTTATACTTCTCCTAACAATGGGAAAAACCATATTACTATTAGAAAAGCCTGCGAGAGTTGCATTGAAGAAGGAGGGTGTTCCCCCGAACGCCCTTCAACTGCAGCAACAACGTCAATTTCTTCGTCTCCACTACGGTTGAAAAAGAGATTGAGAGAATCCGAGGAAACAGAAAGAACAACAATTTCTTTTCGAAAAAGAGACCGAGAGAATCTGAGGAAACAGCAGCAATATCAATTTATTCGTATCCTTTACAATCGAAAGAGCTACCGAGGGAATCCCAGGAAGCAGCAGCGACATCAATCTATTGGTCTCCATTGCCGTCGAAAGAGAAACCGAGAGAATCCAAGGAGGAAGCAGCAGCAACTACAATTTCTTTGTCTCCAAGTTACGGATTCGGTAGGTAGTGATAAAAGAGGAAAGGTTTTAAAAACGAGTTTAATGGAGAAGAATTCAGAGGATTGTGGTAGAAGAGGGAAAGTATTAAAGACAAGTATAATGAAGAAAAATTCAGAGGCTTCTGGTAAGAAAGGGAAGGTATCAAAGACGGAAGGTGAAAGAGGAAGGTATTCACTTAATCAAGTTTTGGTTTCAGGGACTAATGTATTCTGTCGTGGTAGTAACAATGTTGTCAAAAGAGGGGGTTTATTTTCTGATGGCATAGTTTGTAATTGTTGTCGTGTTAATTTCAATATCACTGGATTTGAGGCTCATGCTGGTTGTACAAGACATAGACCATCCACTAGTATCTTGTTGGGAGATGGAAGGTCGTTGTTGGACTGTCAAAGGGAAGCACTTAGTTCACCAAATTCTGAAGCAGGGAATCATTGTGTTGCCCAAGTAAATTCTGACGCGGGGAATCATTATGTTGCCGAAGGAAATTTTGAAGTGCAAGTAAATTCTGAAGCAGGGAATCATTCTGTTGCCGAAGGAAATTCTGAAGTAGGGAATCACTGTGTTGCCAAAGCAAATAACGATACTGTTTGTTCTATTTGTGATTTGGGAGGTGACATAGTACTGTGTGATCAATGTCCTTCTGCATTCCACCTCAGTCTCGATCGAGTTCCGGATGGAGATTGGTTCTGTCCAACATGTTGTTGCAAAATATGCTATCGACCCAAATGCAAGCAAGAATGTGTAGATGGCAATGACAGCAATATTCTTGTTTGTGTTCAATGTGCGGAAAAGTTTCATTTTGGGTGTGTAAAGGCGTTAGGACTTGGATCAAGTCACATTGCCAGCAGTGGTGAAAAGAAGAATTGGTTTTGCAGTGTAAAGTTGTTAGGGAAACCAATAACGGTTGCAGCTAATCTAACTTGGACATTATTGAAGAATGTGAGTAATGATGATCAATTTAGTCAAAAGAAGAGAAAGTTGAATGTGGCTCTTGATGTATTGTATGAGAGTTTTAACCCAACTATTGATGCTTTATCTGGAAGAGAATTGATTAAAGATGTTGTTTTTAGTAGAGGCTCAGAACATAAACGCTTGAACTTTCATGAGAAAATGGGTAAAGTCATTTCGGTTGCAACTATAAGAATTTATGGTCAAAAGGTTGCCGAGATAGTTTTCGTGGCTACCAAGGAACAATATCGAAGACAAGGAATGTGTCGTTTGTTGATGCATGAGCTTGAGAAACAGTTGACACGCTTAGGAGTTGAAAGCTTGGTTTTGCATTCCTCCGAGGATGCTATAGACACATGGACAAAAGCGTTTGTGCCTGAGCATTGTCCAGAAGCTGTAAGAGAATGGTGCCGCTTAACAGGACTACAAGATCGTAAAGATAGTGCTGGTAGAAAGGATTTGACTTTGAAAGCAAAACAACATCTTCTTTCTTTGGGTTGGAAGCTTTGGTACATTGACAAAAATGGTAGGAGGGAATTGCGTTATACTTCTCCTAACAATGGGAAAAACCATATTACTCTTAAAAAAGCCTGCGAGAGTTGCATTGAAGAAGGAGGGTGTTCCCTCAAACACCCTTCAACTGCAGCACCAGTAACAGCAGCAACAATAATTTCTCTGTCTCCATCACAGTCGAAAAAGCGACCTAGAGAATCCGAGGAAGCAGTAGCTAGAGCATTTTCTTTTTCTCAACTACAGCTGAAGGAGCGACAGAGAAAATCTGAGGAAACAGCAGCAACATCAATTTATTCGTCCTGTTTACTTTCTAAAGAGCGACCAAGAGAATCCGAGGAAGAAGCGACAACAACATCAATATATTGGTCTCCATTACAGTCGAATGAGCAACTGAGAGAATCCGTGGAAGCAGCAGCAACAACAACAATTTCTTTGTCTCCATTACAGTCGAAAGAGCGACTGAGAGAATCTGAGGAAGCAGCAGCAATATCAATATATTCATCTCCATTCCAGCTGAAAGTGCAACCGAAGGAATCCGAGGTATCAGTAGCAAGAGGATTTTCTCTGTCTCCATTTCAGTCGATTGAGCGACTGAGAGCATCTGGTGAAGCAGCAGCAACAACAATTTCTTCGTCTCCATTACAGTTGAAAGAGAAACCGAGAGAATCTGAGGAAGCAGTAGTAAGAGCATTTTACTTGTCTCCATTACAGTCGAAAGAGCGACTGAGAGAATGCGAGGAAGCAGCAGCAACATTAATTTATTCGTCTCCATCACTGATAAAAGAGCAACGGAGAGAATCTGATGAAGCAGCATCAAAAACAATTTCTCTGTCTCCATTACAGTCGAAAAAGCAACCAAGTGAATCCGAGGAAGCAGCAGCAATAGCAATGTCTTTGAAATCCTTTGAATTGACTTCTAATGAGGATTCTGAAGCCTCTAGTTTCATTTCTGTTAAAAAAGCCACGGTTACTACATTATCAACATCAATGGAAAATGAGAAGCATGTGATTCAATCTAAACCGGAAGTTACTAATTCGGTGGGTAGTGGTAAAAGAGGGATGGTATTAAATAGAGAAGGTATAAGGGAAAGGTATTCACTTGTTTCTTGGTTGATAAAGAATAAAGTTTTGGTTTCAGGGACTAATGTGCTCTGTCGTGGTAGTCACAATGTTGTTACAAGCGGGAGTATATTTTGTGATGGTATTGTTTGTGATTGTTGTAATTTTAATTTCACTCTCGCTGGATTTAAGGATCACGCTGGTTGTACAAGACCTACATCATCCACTAGTATCTTCTTGGAAGATGGAAGGTCGTTGTTGGAATGTCAAAGGGAAGCTATGAGTTCACGTGATCAAAACGATAATCATTGTATTGCCGAAGCAAACTATGAAGCAAATAACGATACTGTTTGTTCTATTTGTGGTTTTGGAGGTGACATAGTACTATGTGATCGATGTCCTTCTGTATTCCACCTCAGTTGTTTAGATCTTGATCGAGTTCCGGATGGTGATTGGTTCTGTCCAACTTGTTGTTGCAAAATATGTTGTCGACCTAAACGTAAACAAGAATGTACAGATACCAATGATAACAATATTCTTGTTTGTGTTCAATGTGAGCAGAAATTTCACTTTGGGTGTGTAAAGGCAACAGGATATAAATCTAGTCACATGGAGAGTAATGTTAAAAAGAAGAATTGGTTTTGCAATATAGTTTGCGCGAACAGGTTCATATGTCTAAAGAAGCTATTGTGGAAACCAGTTAAGGTTGCGGATAATCTAACTTGGACACTGTTGAAGAATGTGAATAGTGATGATGATGGCGGAGATTTTTCTTCTGATGAGTTTAGTCAAAAGAAGCGTAAGTTAAATGTGGCTCTTCATGTATTGTATGAGAGTTTTTATCCAACAATTGATGCTTTAACTGGAAGAGAGTTGATTAGAGACATTGTTTTTAGTAGAGACTCAGTACATAAGCGCTTGAACTTTTGTGGTTTCTATAATGTGATTTTGGAGAAAATGGAGGAAGTGATTTCGGTGGCTACCATAAGGATTTATGGTCACAAGGTTGCTGAGATAGTTTTCGTGGCCACCAATAAAGAACATCGAGGACAAGGAATGCGTCGTTTGTTGATGGATGAACTTGAGAAACAATTGACTCGCTTTGGAGTAGAAAGCATGGTTTTGCATTCATCCGAGGATGCTATAGACACATGGACAAAATCTTTTGGTTTTGAGAGGATGACAGGTACTGACAAGCGTCAATTTGTTGATATTACTTTCTTAGAATTTCAGGACACTGTCATGTGCCTTAAACCACTGAAGAAACCTAAATGGCCTTTGATAAGATTCAATTTAGTATTAGGACTGAAATAG
Protein sequence

>Msa0519400

MDSRSLPPDINIKPEHCPEAVREWYRLTGLQDRKESAGRKNLALKAKQHLLSLGWNKWELRYTSPNNGKNHITIRKACESCIEEGGCSPERPSTAATTSISSSPLRLKKRLRESEETERTTISFRKRDRENLRKQQQYQFIRILYNRKSYRGNPRKQQRHQSIGLHCRRKRNRENPRRKQQQLQFLCLQVTDSVGSDKRGKVLKTSLMEKNSEDCGRRGKVLKTSIMKKNSEASGKKGKVSKTEGERGRYSLNQVLVSGTNVFCRGSNNVVKRGGLFSDGIVCNCCRVNFNITGFEAHAGCTRHRPSTSILLGDGRSLLDCQREALSSPNSEAGNHCVAQVNSDAGNHYVAEGNFEVQVNSEAGNHSVAEGNSEVGNHCVAKANNDTVCSICDLGGDIVLCDQCPSAFHLSLDRVPDGDWFCPTCCCKICYRPKCKQECVDGNDSNILVCVQCAEKFHFGCVKALGLGSSHIASSGEKKNWFCSVKLLGKPITVAANLTWTLLKNVSNDDQFSQKKRKLNVALDVLYESFNPTIDALSGRELIKDVVFSRGSEHKRLNFHEKMGKVISVATIRIYGQKVAEIVFVATKEQYRRQGMCRLLMHELEKQLTRLGVESLVLHSSEDAIDTWTKAFVPEHCPEAVREWCRLTGLQDRKDSAGRKDLTLKAKQHLLSLGWKLWYIDKNGRRELRYTSPNNGKNHITLKKACESCIEEGGCSLKHPSTAAPVTAATIISLSPSQSKKRPRESEEAVARAFSFSQLQLKERQRKSEETAATSIYSSCLLSKERPRESEEEATTTSIYWSPLQSNEQLRESVEAAATTTISLSPLQSKERLRESEEAAAISIYSSPFQLKVQPKESEVSVARGFSLSPFQSIERLRASGEAAATTISSSPLQLKEKPRESEEAVVRAFYLSPLQSKERLRECEEAAATLIYSSPSLIKEQRRESDEAASKTISLSPLQSKKQPSESEEAAAIAMSLKSFELTSNEDSEASSFISVKKATVTTLSTSMENEKHVIQSKPEVTNSVGSGKRGMVLNREGIRERYSLVSWLIKNKVLVSGTNVLCRGSHNVVTSGSIFCDGIVCDCCNFNFTLAGFKDHAGCTRPTSSTSIFLEDGRSLLECQREAMSSRDQNDNHCIAEANYEANNDTVCSICGFGGDIVLCDRCPSVFHLSCLDLDRVPDGDWFCPTCCCKICCRPKRKQECTDTNDNNILVCVQCEQKFHFGCVKATGYKSSHMESNVKKKNWFCNIVCANRFICLKKLLWKPVKVADNLTWTLLKNVNSDDDGGDFSSDEFSQKKRKLNVALHVLYESFYPTIDALTGRELIRDIVFSRDSVHKRLNFCGFYNVILEKMEEVISVATIRIYGHKVAEIVFVATNKEHRGQGMRRLLMDELEKQLTRFGVESMVLHSSEDAIDTWTKSFGFERMTGTDKRQFVDITFLEFQDTVMCLKPLKKPKWPLIRFNLVLGLK*