Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0522060 | KEH36077.1 | 96.983 | 663 | 13 | 3 | 25 | 682 | 21 | 681 | 0.0 | 1334 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0522060 | sp|Q852L0|HD16N_ORYSJ | 77.327 | 591 | 128 | 2 | 96 | 681 | 117 | 706 | 0.0 | 981 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0522060 | A0A072V2J1 | 96.983 | 663 | 13 | 3 | 25 | 682 | 21 | 681 | 0.0 | 1334 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0522060 | MtrunA17_Chr3g0140431 | 98.662 | 598 | 4 | 1 | 89 | 682 | 1 | 598 | 0.0 | 1236 |
Msa0522060 | MtrunA17_Chr1g0146301 | 85.738 | 610 | 79 | 4 | 81 | 682 | 75 | 684 | 0.0 | 1107 |
Msa0522060 | MtrunA17_Chr7g0214531 | 78.655 | 595 | 121 | 1 | 93 | 681 | 4 | 598 | 0.0 | 1023 |
Msa0522060 | MtrunA17_Chr8g0340491 | 78.182 | 605 | 123 | 3 | 86 | 682 | 88 | 691 | 0.0 | 986 |
Msa0522060 | MtrunA17_Chr1g0213321 | 74.917 | 606 | 145 | 3 | 83 | 681 | 70 | 675 | 0.0 | 979 |
Msa0522060 | MtrunA17_Chr7g0253211 | 75.296 | 591 | 141 | 1 | 96 | 681 | 294 | 884 | 0.0 | 969 |
Msa0522060 | MtrunA17_Chr4g0071031 | 39.560 | 273 | 154 | 5 | 126 | 395 | 9 | 273 | 1.86e-58 | 204 |
Msa0522060 | MtrunA17_Chr2g0329981 | 38.828 | 273 | 156 | 5 | 126 | 395 | 9 | 273 | 6.21e-58 | 203 |
Msa0522060 | MtrunA17_Chr2g0299661 | 38.462 | 273 | 157 | 5 | 126 | 395 | 9 | 273 | 2.67e-56 | 198 |
Msa0522060 | MtrunA17_Chr1g0166821 | 38.434 | 281 | 160 | 6 | 118 | 395 | 4 | 274 | 3.02e-56 | 198 |
Msa0522060 | MtrunA17_Chr7g0261501 | 38.828 | 273 | 156 | 5 | 126 | 395 | 9 | 273 | 4.82e-56 | 197 |
Msa0522060 | MtrunA17_Chr8g0342821 | 38.951 | 267 | 151 | 6 | 126 | 389 | 9 | 266 | 5.79e-56 | 197 |
Msa0522060 | MtrunA17_Chr1g0187571 | 38.351 | 279 | 159 | 6 | 120 | 395 | 6 | 274 | 2.74e-54 | 193 |
Msa0522060 | MtrunA17_Chr1g0183631 | 37.276 | 279 | 162 | 6 | 120 | 395 | 5 | 273 | 1.13e-53 | 191 |
Msa0522060 | MtrunA17_Chr8g0390211 | 37.993 | 279 | 160 | 6 | 120 | 395 | 5 | 273 | 9.11e-53 | 187 |
Msa0522060 | MtrunA17_Chr6g0486611 | 36.630 | 273 | 162 | 5 | 126 | 395 | 9 | 273 | 2.09e-52 | 187 |
Msa0522060 | MtrunA17_Chr1g0167261 | 37.809 | 283 | 161 | 6 | 118 | 395 | 4 | 276 | 3.09e-52 | 184 |
Msa0522060 | MtrunA17_Chr1g0146151 | 36.749 | 283 | 165 | 7 | 116 | 395 | 2 | 273 | 7.72e-52 | 185 |
Msa0522060 | MtrunA17_Chr3g0140071 | 35.842 | 279 | 166 | 6 | 120 | 395 | 5 | 273 | 3.67e-51 | 183 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0522060 | AT2G25760.1 | 75.504 | 694 | 137 | 9 | 1 | 682 | 1 | 673 | 0.0 | 1082 |
Msa0522060 | AT2G25760.2 | 74.892 | 697 | 139 | 10 | 1 | 682 | 1 | 676 | 0.0 | 1072 |
Msa0522060 | AT3G13670.1 | 69.828 | 696 | 182 | 8 | 1 | 682 | 22 | 703 | 0.0 | 1002 |
Msa0522060 | AT3G03940.1 | 74.092 | 606 | 150 | 2 | 83 | 681 | 95 | 700 | 0.0 | 970 |
Msa0522060 | AT5G18190.2 | 74.252 | 602 | 148 | 2 | 87 | 681 | 89 | 690 | 0.0 | 967 |
Msa0522060 | AT5G18190.1 | 74.252 | 602 | 148 | 2 | 87 | 681 | 89 | 690 | 0.0 | 967 |
Msa0522060 | AT3G03930.1 | 69.388 | 245 | 74 | 1 | 438 | 681 | 43 | 287 | 2.24e-121 | 363 |
Msa0522060 | AT3G23340.1 | 39.427 | 279 | 156 | 6 | 120 | 395 | 5 | 273 | 2.63e-57 | 201 |
Msa0522060 | AT4G26100.1 | 38.828 | 273 | 156 | 5 | 126 | 395 | 9 | 273 | 3.48e-57 | 201 |
Msa0522060 | AT2G19470.1 | 39.194 | 273 | 155 | 5 | 126 | 395 | 9 | 273 | 9.79e-57 | 199 |
Msa0522060 | AT1G03930.1 | 38.434 | 281 | 160 | 6 | 118 | 395 | 3 | 273 | 1.85e-56 | 199 |
Msa0522060 | AT4G14340.2 | 39.068 | 279 | 157 | 6 | 120 | 395 | 11 | 279 | 6.00e-56 | 195 |
Msa0522060 | AT4G14340.1 | 39.068 | 279 | 157 | 6 | 120 | 395 | 11 | 279 | 7.56e-56 | 197 |
Msa0522060 | AT1G72710.1 | 38.828 | 273 | 155 | 6 | 126 | 395 | 9 | 272 | 1.94e-55 | 196 |
Msa0522060 | AT5G44100.1 | 37.011 | 281 | 164 | 6 | 118 | 395 | 3 | 273 | 2.73e-55 | 196 |
Msa0522060 | AT5G44100.2 | 37.011 | 281 | 164 | 6 | 118 | 395 | 3 | 273 | 2.73e-55 | 196 |
Msa0522060 | AT5G57015.1 | 38.095 | 273 | 158 | 5 | 126 | 395 | 9 | 273 | 2.86e-55 | 195 |
Msa0522060 | AT5G43320.1 | 39.068 | 279 | 157 | 6 | 120 | 395 | 5 | 273 | 5.64e-55 | 196 |
Msa0522060 | AT4G28860.2 | 37.993 | 279 | 160 | 6 | 120 | 395 | 5 | 273 | 1.73e-54 | 191 |
Msa0522060 | AT4G28540.1 | 37.634 | 279 | 161 | 6 | 120 | 395 | 9 | 277 | 2.43e-54 | 194 |
Msa0522060 | AT4G28860.1 | 37.993 | 279 | 160 | 6 | 120 | 395 | 5 | 273 | 4.86e-54 | 191 |
Msa0522060 | AT5G43320.2 | 39.068 | 279 | 157 | 6 | 120 | 395 | 5 | 273 | 5.05e-54 | 190 |
Msa0522060 | AT5G43320.3 | 39.068 | 279 | 157 | 6 | 120 | 395 | 5 | 273 | 5.05e-54 | 190 |
Msa0522060 | AT1G04440.1 | 37.993 | 279 | 160 | 6 | 120 | 395 | 5 | 273 | 7.96e-54 | 192 |
Msa0522060 | AT4G28880.3 | 38.351 | 279 | 159 | 6 | 120 | 395 | 5 | 273 | 8.60e-54 | 191 |
Msa0522060 | AT4G28880.2 | 38.351 | 279 | 159 | 6 | 120 | 395 | 5 | 273 | 8.60e-54 | 191 |
Msa0522060 | AT4G28880.1 | 38.351 | 279 | 159 | 6 | 120 | 395 | 5 | 273 | 8.60e-54 | 191 |
Msa0522060 | AT4G28880.4 | 38.351 | 279 | 159 | 6 | 120 | 395 | 5 | 273 | 8.60e-54 | 191 |
Msa0522060 | AT3G23340.2 | 38.697 | 261 | 149 | 5 | 138 | 395 | 7 | 259 | 2.65e-50 | 181 |
Msa0522060 | AT4G08800.1 | 34.066 | 273 | 137 | 6 | 126 | 395 | 9 | 241 | 4.48e-42 | 154 |
Find 239 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTATGCTACACCTTTCTTTA+TGG | 0.140701 | 3_4:+75124501 | Msa0522060:three_prime_UTR |
CGTAACCATATTGGTTTCTT+TGG | 0.150253 | 3_4:+75124909 | Msa0522060:three_prime_UTR |
TCTGAGCACCCTCGGTATTT+AGG | 0.209029 | 3_4:-75122917 | None:intergenic |
CCCATTCGGACCTTCTTCTT+TGG | 0.219272 | 3_4:-75123097 | None:intergenic |
GACCCACAATTCCATCAAAA+AGG | 0.232071 | 3_4:-75122875 | None:intergenic |
CTGAGCACCCTCGGTATTTA+GGG | 0.247642 | 3_4:-75122916 | None:intergenic |
CTTTCCCAACACATTGTAAA+AGG | 0.251961 | 3_4:+75123283 | Msa0522060:CDS |
TGGCTTCTTGTGCTAGTCTT+TGG | 0.253271 | 3_4:+75123335 | Msa0522060:CDS |
AAGCTTGGGAAGGGAGGATT+TGG | 0.257494 | 3_4:+75120244 | Msa0522060:CDS |
TGTTTCACAGGAATGGATTA+TGG | 0.259630 | 3_4:+75123551 | Msa0522060:intron |
ATCAGCGCCCAGATGTATTT+AGG | 0.267336 | 3_4:+75122377 | Msa0522060:CDS |
CTTCTGCCTCCGATTCCTTC+TGG | 0.270294 | 3_4:-75119746 | None:intergenic |
AAACGAGTCACTGACTTTAT+AGG | 0.282911 | 3_4:-75123808 | None:intergenic |
GGCTTCTTGTGCTAGTCTTT+GGG | 0.284395 | 3_4:+75123336 | Msa0522060:CDS |
GGCTCCTCAATGTCTGAATT+TGG | 0.290706 | 3_4:+75124818 | Msa0522060:three_prime_UTR |
ATATGCTTGGCTCTAGTCTA+TGG | 0.295213 | 3_4:+75120927 | Msa0522060:CDS |
TGGCCACTGCTGGCACTAGA+TGG | 0.300589 | 3_4:+75123883 | Msa0522060:CDS |
TATAGGATTGTTGCATGTAT+TGG | 0.306085 | 3_4:-75123791 | None:intergenic |
GCTCAAAACCTTTGTTTCAT+TGG | 0.309003 | 3_4:-75123163 | None:intergenic |
TAAGAAGAAGGCAGTGGTTA+GGG | 0.314293 | 3_4:+75119870 | Msa0522060:CDS |
AGGGGCCTAATGTCAGGATT+TGG | 0.316161 | 3_4:-75122897 | None:intergenic |
GCTCTAGTCTATGGGATGTT+TGG | 0.316967 | 3_4:+75120936 | Msa0522060:CDS |
GCGAATCTCTCTCATCTTCA+TGG | 0.318831 | 3_4:+75119605 | Msa0522060:five_prime_UTR |
TTCGGCTCCCGGAGCTTTAT+CGG | 0.329884 | 3_4:-75119941 | None:intergenic |
ATAGGATTGTTGCATGTATT+GGG | 0.335579 | 3_4:-75123790 | None:intergenic |
TTTCTGGTTGATCTTGGATT+AGG | 0.337171 | 3_4:+75122230 | Msa0522060:CDS |
ACCAACCTTGTGAAGAAAAC+TGG | 0.342759 | 3_4:-75123413 | None:intergenic |
TAGTCTTTGGGCACTCATTA+TGG | 0.347322 | 3_4:+75123348 | Msa0522060:CDS |
GTAACCATATTGGTTTCTTT+GGG | 0.347615 | 3_4:+75124910 | Msa0522060:three_prime_UTR |
GTGAATAACGACGACGAAAC+AGG | 0.354236 | 3_4:+75119814 | Msa0522060:CDS |
TGGGAGAACAGTTTCATAAA+TGG | 0.360026 | 3_4:+75124343 | Msa0522060:exon |
ACACTAATCCACTGTGTTGC+TGG | 0.363197 | 3_4:-75123124 | None:intergenic |
GTTACCTTGGCAAGGATATC+AGG | 0.363733 | 3_4:+75122595 | Msa0522060:CDS |
GACACGATCGATGAGATATT+AGG | 0.366932 | 3_4:-75119507 | None:intergenic |
TTCCTATCTAATCTATATAA+TGG | 0.369860 | 3_4:-75120223 | None:intergenic |
CTCCCTTCTTCTTCGGCTCC+CGG | 0.370094 | 3_4:-75119952 | None:intergenic |
ACACGATCGATGAGATATTA+GGG | 0.377955 | 3_4:-75119506 | None:intergenic |
ATCGTTATGTCCCGTGGTGC+TGG | 0.379814 | 3_4:+75123909 | Msa0522060:CDS |
AGAACAAACCTAAATACATC+TGG | 0.381852 | 3_4:-75122385 | None:intergenic |
TTGTTACAGGGAGAAAATAA+AGG | 0.383335 | 3_4:+75122714 | Msa0522060:intron |
CTCATTATGGATGCTGGCAC+TGG | 0.386456 | 3_4:+75123361 | Msa0522060:CDS |
GCAAGGTGCCTACTACATTA+TGG | 0.390148 | 3_4:+75120816 | Msa0522060:CDS |
AACAGTAATTATTATGTTGA+AGG | 0.391003 | 3_4:+75124660 | Msa0522060:three_prime_UTR |
AACAGCAAAGGGTGCAATTA+CGG | 0.391275 | 3_4:+75120619 | Msa0522060:CDS |
TATAGATTAGATAGGAAGCT+TGG | 0.395411 | 3_4:+75120229 | Msa0522060:CDS |
TATATCGCATCTATTAGTTA+TGG | 0.395955 | 3_4:+75124323 | Msa0522060:CDS |
ATAAGAAGAAGGCAGTGGTT+AGG | 0.397165 | 3_4:+75119869 | Msa0522060:CDS |
AACTTCTTGCTTGGACCCTC+GGG | 0.405644 | 3_4:+75122185 | Msa0522060:CDS |
CGCCGCCGGTCGCCGGCGGG+AGG | 0.407045 | 3_4:+75119695 | Msa0522060:CDS |
GGAATCAAAATCACCTTCTC+AGG | 0.410551 | 3_4:-75119988 | None:intergenic |
TCACAATAGCGTAACCATAT+TGG | 0.410828 | 3_4:+75124900 | Msa0522060:three_prime_UTR |
ACGCGCCGCCGGTCGCCGGC+GGG | 0.411110 | 3_4:+75119692 | Msa0522060:CDS |
GTGACTCGTTTCCATTTAAG+TGG | 0.412212 | 3_4:+75123820 | Msa0522060:CDS |
AGTTGTACTCCCTTCTTCTT+CGG | 0.412608 | 3_4:-75119959 | None:intergenic |
TCAATGTCTGAATTTGGCCT+TGG | 0.421015 | 3_4:+75124824 | Msa0522060:three_prime_UTR |
AAGTTGTTTCTGGTTGATCT+TGG | 0.425523 | 3_4:+75122224 | Msa0522060:CDS |
CTCCATTATATAGATTAGAT+AGG | 0.426261 | 3_4:+75120221 | Msa0522060:CDS |
ATATCGCATCTATTAGTTAT+GGG | 0.426501 | 3_4:+75124324 | Msa0522060:CDS |
AAACTTCTTGCTTGGACCCT+CGG | 0.431706 | 3_4:+75122184 | Msa0522060:CDS |
GATAGGAAGCTTGGGAAGGG+AGG | 0.432226 | 3_4:+75120238 | Msa0522060:CDS |
TTCTTCGTGGTCGGTTACCT+TGG | 0.433456 | 3_4:+75122582 | Msa0522060:CDS |
CAAAAGCAACACAAAGCTTC+GGG | 0.436504 | 3_4:-75122771 | None:intergenic |
ACTTCACTCATCAATGACTT+TGG | 0.436857 | 3_4:+75119575 | Msa0522060:five_prime_UTR |
AACGCGCCGCCGGTCGCCGG+CGG | 0.437647 | 3_4:+75119691 | Msa0522060:CDS |
CCTTCTGGTCTGTGCGGCGG+TGG | 0.439587 | 3_4:-75119731 | None:intergenic |
GTCACTGCTATGGCCACTGC+TGG | 0.440107 | 3_4:+75123873 | Msa0522060:CDS |
TGGGTCCAAATCCTGACATT+AGG | 0.442025 | 3_4:+75122892 | Msa0522060:CDS |
AGCGTTTCTTGAGTTTCATC+AGG | 0.442256 | 3_4:-75124164 | None:intergenic |
AAAACCCAAAGAAACCAATA+TGG | 0.443231 | 3_4:-75124914 | None:intergenic |
ACGCTTGTCTTCCTTCTTCG+TGG | 0.445559 | 3_4:+75122569 | Msa0522060:CDS |
ACAAAAGCAACACAAAGCTT+CGG | 0.446009 | 3_4:-75122772 | None:intergenic |
AAAATAAAAGCAGCTTGATC+AGG | 0.446910 | 3_4:-75124119 | None:intergenic |
CGACGCGTAGGACCTGGTTC+TGG | 0.447238 | 3_4:+75120283 | Msa0522060:CDS |
GGTTGGTTTGATTGATATGA+AGG | 0.447482 | 3_4:+75124954 | Msa0522060:three_prime_UTR |
AAGCCTGAAAACTTCTTGCT+TGG | 0.452042 | 3_4:+75122176 | Msa0522060:CDS |
GTATTTAGGGGCCTAATGTC+AGG | 0.452090 | 3_4:-75122903 | None:intergenic |
CGTTGGCGTGATAGTTCAAC+TGG | 0.453748 | 3_4:+75122337 | Msa0522060:CDS |
ATCTAGGATGTCTACTGAAA+TGG | 0.454067 | 3_4:+75121072 | Msa0522060:intron |
CTGTGCGGCGGTGGCAGCGA+CGG | 0.454161 | 3_4:-75119722 | None:intergenic |
TTTACCTTAACATGAGTACT+AGG | 0.455799 | 3_4:-75124203 | None:intergenic |
TATTACATCAGTGCCATAGC+TGG | 0.456706 | 3_4:+75123591 | Msa0522060:CDS |
GGTTTGTGATGAGAGGGAAA+TGG | 0.469323 | 3_4:-75119485 | None:intergenic |
AAAATCACCTTCTCAGGAAG+TGG | 0.470398 | 3_4:-75119982 | None:intergenic |
CTCCTCCCGCCGGCGACCGG+CGG | 0.471128 | 3_4:-75119697 | None:intergenic |
GCTCTCCTCCCGCCGGCGAC+CGG | 0.471790 | 3_4:-75119700 | None:intergenic |
TGGGCACTCATTATGGATGC+TGG | 0.472875 | 3_4:+75123355 | Msa0522060:CDS |
AGCTAGTAACGGGTCCTCAT+TGG | 0.474983 | 3_4:+75123614 | Msa0522060:CDS |
CGAGGTCGGGTACGCAACTC+AGG | 0.476552 | 3_4:-75119649 | None:intergenic |
GATAACGCGCCGCCGGTCGC+CGG | 0.478774 | 3_4:+75119688 | Msa0522060:CDS |
TCATTGGTTGTAATGTCAAA+AGG | 0.480800 | 3_4:+75123630 | Msa0522060:CDS |
AGCTTGGGAAGGGAGGATTT+GGG | 0.483807 | 3_4:+75120245 | Msa0522060:CDS |
CTACATATTCTACAAACTGC+CGG | 0.484853 | 3_4:-75122806 | None:intergenic |
AACTAATAGATGCGATATAG+AGG | 0.485124 | 3_4:-75124319 | None:intergenic |
ATTGTAAAAGGAAATGAAGA+TGG | 0.488040 | 3_4:+75123295 | Msa0522060:CDS |
GGAAGACAAGCGTGTAAGCA+AGG | 0.490386 | 3_4:-75122559 | None:intergenic |
ATAGATTAGATAGGAAGCTT+GGG | 0.491550 | 3_4:+75120230 | Msa0522060:CDS |
CCGCACAGACCAGAAGGAAT+CGG | 0.493586 | 3_4:+75119737 | Msa0522060:CDS |
CTCTGTAAATCCAGCACCAC+GGG | 0.494784 | 3_4:-75123919 | None:intergenic |
TTCATCATCATCCTCTTCCA+TGG | 0.494964 | 3_4:-75123071 | None:intergenic |
TAGGTCAAAATCATATCAGC+TGG | 0.495543 | 3_4:-75124382 | None:intergenic |
GTGTTGCTGGCTGACCCATT+CGG | 0.496471 | 3_4:-75123111 | None:intergenic |
GAATACCTTCGCTAGGGTAC+AGG | 0.498162 | 3_4:-75124049 | None:intergenic |
TTAGATAGGAAGCTTGGGAA+GGG | 0.503149 | 3_4:+75120235 | Msa0522060:CDS |
CGTAGTGCCGATAAAGCTCC+GGG | 0.503731 | 3_4:+75119934 | Msa0522060:CDS |
GCTCCGGGAGCCGAAGAAGA+AGG | 0.504739 | 3_4:+75119949 | Msa0522060:CDS |
CCGTAGTGCCGATAAAGCTC+CGG | 0.505206 | 3_4:+75119933 | Msa0522060:CDS |
ATTACGCTATTACAAACTGC+TGG | 0.506619 | 3_4:-75124869 | None:intergenic |
CTTGCCTACACATCTGAGTT+GGG | 0.508086 | 3_4:+75124419 | Msa0522060:three_prime_UTR |
GTTGGCCGACGCGTAGGACC+TGG | 0.509010 | 3_4:+75120277 | Msa0522060:CDS |
GGAAGGAGAGAATAAGAAGA+AGG | 0.510183 | 3_4:+75119858 | Msa0522060:CDS |
TCTCAAGACATAAATATGGT+TGG | 0.512896 | 3_4:+75124937 | Msa0522060:three_prime_UTR |
CCATAGCTGGAGCTAGTAAC+GGG | 0.513636 | 3_4:+75123604 | Msa0522060:CDS |
ATTAGATAGGAAGCTTGGGA+AGG | 0.514540 | 3_4:+75120234 | Msa0522060:CDS |
ATTCTACAAGAAATTTATCA+TGG | 0.514722 | 3_4:-75124455 | None:intergenic |
TATTAGGGTTTGTGATGAGA+GGG | 0.517092 | 3_4:-75119491 | None:intergenic |
ATATTAGGGTTTGTGATGAG+AGG | 0.520286 | 3_4:-75119492 | None:intergenic |
TTGTCTTCCTTCTTCGTGGT+CGG | 0.524778 | 3_4:+75122573 | Msa0522060:CDS |
GCTATGGATGAGTACGATAG+TGG | 0.525051 | 3_4:+75119907 | Msa0522060:CDS |
TGTAGAATGCAGTTCAGCAT+TGG | 0.526609 | 3_4:+75124470 | Msa0522060:three_prime_UTR |
TAGCTTTAAATCAAGAGGTA+AGG | 0.529304 | 3_4:-75124789 | None:intergenic |
TTCTCATCAGGGGTTCCCGA+GGG | 0.529311 | 3_4:-75122200 | None:intergenic |
GCTTGCCTACACATCTGAGT+TGG | 0.529392 | 3_4:+75124418 | Msa0522060:three_prime_UTR |
GGATTTGGGCAAGTCTATGT+TGG | 0.531558 | 3_4:+75120259 | Msa0522060:CDS |
CCAAAGAAGAAGGTCCGAAT+GGG | 0.533192 | 3_4:+75123097 | Msa0522060:CDS |
TGAAGTATCGTATATAAGAG+AGG | 0.533311 | 3_4:-75119558 | None:intergenic |
TAATTACAGATTCAAGTTGG+TGG | 0.534253 | 3_4:+75120196 | Msa0522060:intron |
ATGATGACAACCATAAAGAA+AGG | 0.534545 | 3_4:-75124511 | None:intergenic |
AGGACGATTGACCATGGAAG+AGG | 0.534909 | 3_4:+75123060 | Msa0522060:CDS |
TTATAGCACCCAGTTCCCGC+TGG | 0.535540 | 3_4:-75124736 | None:intergenic |
ATTACGGACCTCCACATGAA+TGG | 0.537264 | 3_4:+75120635 | Msa0522060:CDS |
TCTTAATTACAGATTCAAGT+TGG | 0.538540 | 3_4:+75120193 | Msa0522060:intron |
ACAAACTGCCGGAAAGGTGC+AGG | 0.538874 | 3_4:-75122795 | None:intergenic |
TATGCTTGGCTCTAGTCTAT+GGG | 0.539645 | 3_4:+75120928 | Msa0522060:CDS |
CTTCGATGAATACCTTCGCT+AGG | 0.540351 | 3_4:-75124056 | None:intergenic |
ACCTGGTTCTGGTGCCGTTG+AGG | 0.543472 | 3_4:+75120294 | Msa0522060:CDS |
AGCACATACCATAATGTAGT+AGG | 0.544663 | 3_4:-75120824 | None:intergenic |
GGTTTCTAGAGAGGAAGCTA+TGG | 0.545782 | 3_4:+75119891 | Msa0522060:CDS |
GAGACGGTTTATGCGAGGTC+GGG | 0.546267 | 3_4:-75119662 | None:intergenic |
CGGACCTCCACATGAATGGC+AGG | 0.546511 | 3_4:+75120639 | Msa0522060:CDS |
TGGTGCTGGATTTACAGAGC+AGG | 0.546908 | 3_4:+75123923 | Msa0522060:CDS |
GAGAGATTGAAAGAAGAGGA+AGG | 0.548043 | 3_4:+75119841 | Msa0522060:CDS |
GGCCACTGCTGGCACTAGAT+GGG | 0.549197 | 3_4:+75123884 | Msa0522060:CDS |
AGAGAATAAGAAGAAGGCAG+TGG | 0.549582 | 3_4:+75119864 | Msa0522060:CDS |
ACCTCAACGGCACCAGAACC+AGG | 0.552030 | 3_4:-75120295 | None:intergenic |
AAGGTAACCGACCACGAAGA+AGG | 0.552994 | 3_4:-75122580 | None:intergenic |
TTTCTCATCAGGGGTTCCCG+AGG | 0.557461 | 3_4:-75122201 | None:intergenic |
GCGAAGGTATTCATCGAAGG+TGG | 0.558729 | 3_4:+75124060 | Msa0522060:CDS |
CTCCGGGAGCCGAAGAAGAA+GGG | 0.558776 | 3_4:+75119950 | Msa0522060:CDS |
TGAGCACCCTCGGTATTTAG+GGG | 0.558929 | 3_4:-75122915 | None:intergenic |
ACTCAGATGTGTAGGCAAGC+GGG | 0.559158 | 3_4:-75124415 | None:intergenic |
TGATGAACAACCAAAGAAGA+AGG | 0.560213 | 3_4:+75123087 | Msa0522060:CDS |
AGTGGTTAGGGTTTCTAGAG+AGG | 0.560234 | 3_4:+75119882 | Msa0522060:CDS |
AGGAATGGATTATGGAACAG+TGG | 0.562856 | 3_4:+75123559 | Msa0522060:intron |
AAGTAGGCCTACCTTGTACT+TGG | 0.563694 | 3_4:+75124757 | Msa0522060:three_prime_UTR |
CGTGGTCGGTTACCTTGGCA+AGG | 0.564377 | 3_4:+75122587 | Msa0522060:CDS |
ATTCAGACATTGAGGAGCCT+CGG | 0.564430 | 3_4:-75124814 | None:intergenic |
AAATACCGAGGGTGCTCAGA+AGG | 0.565005 | 3_4:+75122920 | Msa0522060:CDS |
CACGAGTACATTACAAGGGA+CGG | 0.566096 | 3_4:+75120794 | Msa0522060:CDS |
AGTAGAGAGATTGAAAGAAG+AGG | 0.566314 | 3_4:+75119837 | Msa0522060:CDS |
GGATAAAAGAGCCAAGTACA+AGG | 0.566325 | 3_4:-75124768 | None:intergenic |
TTTAGAGATCTGTGATGGGA+GGG | 0.566369 | 3_4:-75119457 | None:intergenic |
GGGAACTGGGTGCTATAAGT+AGG | 0.567142 | 3_4:+75124741 | Msa0522060:three_prime_UTR |
GCTAGTGTGCATGCACATCT+TGG | 0.567152 | 3_4:+75122503 | Msa0522060:CDS |
AAGTAGCAGGAGAGATGACT+TGG | 0.570146 | 3_4:+75122532 | Msa0522060:CDS |
TAGAGAAGATGCATTGTAGA+GGG | 0.572443 | 3_4:+75121128 | Msa0522060:CDS |
AAGTGTTTAGAGATCTGTGA+TGG | 0.573312 | 3_4:-75119462 | None:intergenic |
CCACCGCCGCACAGACCAGA+AGG | 0.573426 | 3_4:+75119731 | Msa0522060:CDS |
ACCAAAGAAGAAGGTCCGAA+TGG | 0.576715 | 3_4:+75123096 | Msa0522060:CDS |
CGGAGTAGCTTTAAATCAAG+AGG | 0.576803 | 3_4:-75124794 | None:intergenic |
TATTCTACAAACTGCCGGAA+AGG | 0.578047 | 3_4:-75122801 | None:intergenic |
GTTTCTTGAGTTTCATCAGG+TGG | 0.578812 | 3_4:-75124161 | None:intergenic |
ACACAAAGCTTCGGGTGAAG+TGG | 0.580070 | 3_4:-75122763 | None:intergenic |
ACACAGGTCATGGATATGCT+TGG | 0.581027 | 3_4:+75120914 | Msa0522060:intron |
GAAGTATCGTATATAAGAGA+GGG | 0.582036 | 3_4:-75119557 | None:intergenic |
GAACAAACCTAAATACATCT+GGG | 0.586444 | 3_4:-75122384 | None:intergenic |
GCCATAGCTGGAGCTAGTAA+CGG | 0.586802 | 3_4:+75123603 | Msa0522060:CDS |
TGTTCCACGAGTACATTACA+AGG | 0.586861 | 3_4:+75120789 | Msa0522060:CDS |
GGAATGGATTATGGAACAGT+GGG | 0.588580 | 3_4:+75123560 | Msa0522060:intron |
TACAACTCCACTTCCTGAGA+AGG | 0.591492 | 3_4:+75119975 | Msa0522060:CDS |
GTGTTGGGAAAGCCGCTCAT+CGG | 0.591532 | 3_4:-75123272 | None:intergenic |
ATCTTGGTAGAACAAGTAGC+AGG | 0.592624 | 3_4:+75122519 | Msa0522060:CDS |
AGTTCCCAACTCAGATGTGT+AGG | 0.592708 | 3_4:-75124423 | None:intergenic |
TTAGAGAAGATGCATTGTAG+AGG | 0.593386 | 3_4:+75121127 | Msa0522060:CDS |
AACTCAGATGTGTAGGCAAG+CGG | 0.596134 | 3_4:-75124416 | None:intergenic |
TGAGACGGTTTATGCGAGGT+CGG | 0.596794 | 3_4:-75119663 | None:intergenic |
GTCTATGTTGGCCGACGCGT+AGG | 0.597437 | 3_4:+75120271 | Msa0522060:CDS |
AGCACATTAGGTGGTAGTCA+TGG | 0.600563 | 3_4:+75120766 | Msa0522060:intron |
TCTCACTGATAACGCGCCGC+CGG | 0.600651 | 3_4:+75119681 | Msa0522060:CDS |
AGCGACGGCTCTCCTCCCGC+CGG | 0.600658 | 3_4:-75119707 | None:intergenic |
TTCGATGAATACCTTCGCTA+GGG | 0.601994 | 3_4:-75124055 | None:intergenic |
ATAACCTGATATCCTTGCCA+AGG | 0.602758 | 3_4:-75122599 | None:intergenic |
AAAAGAGCCAAGTACAAGGT+AGG | 0.604138 | 3_4:-75124764 | None:intergenic |
AAGGCCAAATTCAGACATTG+AGG | 0.604160 | 3_4:-75124822 | None:intergenic |
GCTGATCATAATCAACATGA+AGG | 0.604750 | 3_4:-75122360 | None:intergenic |
TTGTAATAGCGTAATCATTG+TGG | 0.606706 | 3_4:+75124877 | Msa0522060:three_prime_UTR |
TGCCCATCTAGTGCCAGCAG+TGG | 0.609467 | 3_4:-75123886 | None:intergenic |
CACAGACCAGAAGGAATCGG+AGG | 0.609955 | 3_4:+75119740 | Msa0522060:CDS |
TTGTAAACCTGCCATTCATG+TGG | 0.611605 | 3_4:-75120646 | None:intergenic |
CGAAGGTATTCATCGAAGGT+GGG | 0.611610 | 3_4:+75124061 | Msa0522060:CDS |
TAGGATGTCTACTGAAATGG+TGG | 0.612266 | 3_4:+75121075 | Msa0522060:intron |
CTCGAAGACCAATGAAACAA+AGG | 0.612268 | 3_4:+75123155 | Msa0522060:CDS |
TTGAGCATAGAAACAGCAAA+GGG | 0.612579 | 3_4:+75120608 | Msa0522060:CDS |
CCCGTTACTAGCTCCAGCTA+TGG | 0.614186 | 3_4:-75123604 | None:intergenic |
TTTGAGCATAGAAACAGCAA+AGG | 0.615974 | 3_4:+75120607 | Msa0522060:CDS |
AAGTACCTTCTGAGCACCCT+CGG | 0.619914 | 3_4:-75122925 | None:intergenic |
GATTTCCTGTACCCTAGCGA+AGG | 0.620350 | 3_4:+75124044 | Msa0522060:CDS |
AAAGAGAGGACGATTGACCA+TGG | 0.622958 | 3_4:+75123054 | Msa0522060:CDS |
ATTCCTTCTGGTCTGTGCGG+CGG | 0.623393 | 3_4:-75119734 | None:intergenic |
CGTCCCTTGTAATGTACTCG+TGG | 0.624983 | 3_4:-75120793 | None:intergenic |
GGTGGCATGTATTGCAATCG+AGG | 0.627258 | 3_4:+75121093 | Msa0522060:CDS |
CCGGAGCTTTATCGGCACTA+CGG | 0.627559 | 3_4:-75119933 | None:intergenic |
GTTTAGAGATCTGTGATGGG+AGG | 0.627689 | 3_4:-75119458 | None:intergenic |
TAAACCTGCCATTCATGTGG+AGG | 0.628206 | 3_4:-75120643 | None:intergenic |
GTACATTACAAGGGACGGCA+AGG | 0.629460 | 3_4:+75120799 | Msa0522060:CDS |
TGGGCAATCGTTATGTCCCG+TGG | 0.629993 | 3_4:+75123903 | Msa0522060:CDS |
ATTACAATGTGGCCGATGAG+CGG | 0.631315 | 3_4:+75123260 | Msa0522060:CDS |
GCGGCGCGTTATCAGTGAGA+CGG | 0.633560 | 3_4:-75119678 | None:intergenic |
TGTTGTTGCAGATATGTGCA+TGG | 0.634497 | 3_4:+75122146 | Msa0522060:intron |
CTAGCGAAGGTATTCATCGA+AGG | 0.635806 | 3_4:+75124057 | Msa0522060:CDS |
GAAGACAAGCGTGTAAGCAA+GGG | 0.638778 | 3_4:-75122558 | None:intergenic |
TTGCAGCAGTTGCAGTAATG+CGG | 0.640610 | 3_4:-75124094 | None:intergenic |
TACTAGGAAAATCAGACGTG+CGG | 0.651938 | 3_4:-75124187 | None:intergenic |
TGGTTTATTTATTAGCAGTG+TGG | 0.653080 | 3_4:+75123315 | Msa0522060:CDS |
AGGCATCGTAAAGATAGCGT+TGG | 0.654933 | 3_4:-75119629 | None:intergenic |
AAACACCGTACATACCTCAA+CGG | 0.667251 | 3_4:-75120308 | None:intergenic |
TGTCAGGTTGGACAAAAGAG+AGG | 0.668670 | 3_4:+75123040 | Msa0522060:intron |
ATGGATGAGTACGATAGTGG+TGG | 0.670453 | 3_4:+75119910 | Msa0522060:CDS |
CAGAACCAGGTCCTACGCGT+CGG | 0.671637 | 3_4:-75120282 | None:intergenic |
GCTCTGTAAATCCAGCACCA+CGG | 0.673158 | 3_4:-75123920 | None:intergenic |
CATTAGGCCCCTAAATACCG+AGG | 0.680909 | 3_4:+75122908 | Msa0522060:CDS |
TCAGTGAGACGGTTTATGCG+AGG | 0.681265 | 3_4:-75119667 | None:intergenic |
CTACAAGAAATTTATCATGG+AGG | 0.683620 | 3_4:-75124452 | None:intergenic |
ATTAGGCCCCTAAATACCGA+GGG | 0.697940 | 3_4:+75122909 | Msa0522060:CDS |
AGTGTTTAGAGATCTGTGAT+GGG | 0.703597 | 3_4:-75119461 | None:intergenic |
TGGGTCAGCCAGCAACACAG+TGG | 0.714696 | 3_4:+75123116 | Msa0522060:CDS |
GCGTAGGTATCATTACAATG+TGG | 0.721199 | 3_4:+75123249 | Msa0522060:intron |
GTTCCACGAGTACATTACAA+GGG | 0.736863 | 3_4:+75120790 | Msa0522060:CDS |
CTTGATTTAAAGCTACTCCG+AGG | 0.740070 | 3_4:+75124797 | Msa0522060:three_prime_UTR |
CCGATTCCTTCTGGTCTGTG+CGG | 0.742167 | 3_4:-75119737 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGAATTTTTTAATTTTGTAA+GGG | + | chr3_4:75120383-75120402 | Msa0522060:intron | 10.0% |
!!! | TAAGTTTTTTAATAAAGTAA+TGG | + | chr3_4:75120849-75120868 | Msa0522060:intron | 10.0% |
!!! | AAGTTTTTTAATAAAGTAAT+GGG | + | chr3_4:75120850-75120869 | Msa0522060:intron | 10.0% |
!! | TTATTTATGCAAAAATAAAT+CGG | + | chr3_4:75121378-75121397 | Msa0522060:intron | 10.0% |
!!! | TATTTGATATATTTTTCTAT+AGG | + | chr3_4:75124280-75124299 | Msa0522060:intron | 10.0% |
!!! | CTGAATTTTTTAATTTTGTA+AGG | + | chr3_4:75120382-75120401 | Msa0522060:intron | 15.0% |
!!! | TTGTTACATAATATTTTAGT+TGG | + | chr3_4:75120406-75120425 | Msa0522060:intron | 15.0% |
!!! | AGTTTTTTAATAAAGTAATG+GGG | + | chr3_4:75120851-75120870 | Msa0522060:intron | 15.0% |
!!! | CATATTTTTTGTAAATGTTT+TGG | + | chr3_4:75121013-75121032 | Msa0522060:intron | 15.0% |
!! | ATAATAAATATAATATGACC+AGG | - | chr3_4:75121167-75121186 | None:intergenic | 15.0% |
!! | ATCTATTATATTACTAACAT+TGG | - | chr3_4:75122040-75122059 | None:intergenic | 15.0% |
!!! | TACATACATTGATTTAAATA+AGG | - | chr3_4:75122429-75122448 | None:intergenic | 15.0% |
!! | TATTTAAATCAATGTATGTA+TGG | + | chr3_4:75122429-75122448 | Msa0522060:intron | 15.0% |
!!! | ATATTTTTCTATAGGAAAAA+TGG | + | chr3_4:75124288-75124307 | Msa0522060:intron | 15.0% |
!!! | TATTTTTCTATAGGAAAAAT+GGG | + | chr3_4:75124289-75124308 | Msa0522060:intron | 15.0% |
!!! | TAATTATTTTTGTTTGATGA+TGG | + | chr3_4:75124685-75124704 | Msa0522060:three_prime_UTR | 15.0% |
!! | TTCCTATCTAATCTATATAA+TGG | - | chr3_4:75120226-75120245 | None:intergenic | 20.0% |
!! | TGATTAAATAACATTGTTGT+GGG | + | chr3_4:75120502-75120521 | Msa0522060:intron | 20.0% |
!!! | GTTTTTTAATAAAGTAATGG+GGG | + | chr3_4:75120852-75120871 | Msa0522060:intron | 20.0% |
!!! | TTTTACTAAATTAAGTGTTG+TGG | + | chr3_4:75121471-75121490 | Msa0522060:intron | 20.0% |
!! | ATTTAATTGAGATACAGTAA+TGG | - | chr3_4:75121744-75121763 | None:intergenic | 20.0% |
!! | AAGAACAAAAACAAATTTGA+GGG | - | chr3_4:75121947-75121966 | None:intergenic | 20.0% |
!!! | TTATGAAATTGTTTGTTACA+GGG | + | chr3_4:75122702-75122721 | Msa0522060:intron | 20.0% |
!!! | GATATGTATTTTGCATAATT+TGG | - | chr3_4:75122855-75122874 | None:intergenic | 20.0% |
!! | AAATATAGAAAGTCAAAACT+GGG | - | chr3_4:75123227-75123246 | None:intergenic | 20.0% |
!! | AAAATATAGAAAGTCAAAAC+TGG | - | chr3_4:75123228-75123247 | None:intergenic | 20.0% |
!!! | AGTTTTGACTTTCTATATTT+TGG | + | chr3_4:75123227-75123246 | Msa0522060:intron | 20.0% |
!! | TCTTGATGCATTATATATTT+AGG | + | chr3_4:75123665-75123684 | Msa0522060:intron | 20.0% |
!! | ATTCTACAAGAAATTTATCA+TGG | - | chr3_4:75124458-75124477 | None:intergenic | 20.0% |
!! | AACAGTAATTATTATGTTGA+AGG | + | chr3_4:75124660-75124679 | Msa0522060:three_prime_UTR | 20.0% |
!!! | TTTTTCTCAAGACATAAATA+TGG | + | chr3_4:75124933-75124952 | Msa0522060:three_prime_UTR | 20.0% |
!! | GATAATTTTTGTCATGTGTT+AGG | + | chr3_4:75120148-75120167 | Msa0522060:intron | 25.0% |
! | TCTTAATTACAGATTCAAGT+TGG | + | chr3_4:75120193-75120212 | Msa0522060:intron | 25.0% |
! | CTCCATTATATAGATTAGAT+AGG | + | chr3_4:75120221-75120240 | Msa0522060:CDS | 25.0% |
! | GTGATTAAATAACATTGTTG+TGG | + | chr3_4:75120501-75120520 | Msa0522060:intron | 25.0% |
!!! | TCTAACCTTAGTTCTTTTTT+CGG | + | chr3_4:75121049-75121068 | Msa0522060:intron | 25.0% |
! | TTTACTAACAGATTGTCTAT+GGG | + | chr3_4:75121203-75121222 | Msa0522060:intron | 25.0% |
! | TTATGCAAAAATAAATCGGT+TGG | + | chr3_4:75121382-75121401 | Msa0522060:intron | 25.0% |
! | TATGCAAAAATAAATCGGTT+GGG | + | chr3_4:75121383-75121402 | Msa0522060:intron | 25.0% |
! | TATCATTCTGTGATTATGAT+AGG | + | chr3_4:75121769-75121788 | Msa0522060:intron | 25.0% |
! | ATCATTCTGTGATTATGATA+GGG | + | chr3_4:75121770-75121789 | Msa0522060:intron | 25.0% |
! | GAAGAACAAAAACAAATTTG+AGG | - | chr3_4:75121948-75121967 | None:intergenic | 25.0% |
! | GATTCTGTATATCATATTCT+TGG | + | chr3_4:75122461-75122480 | Msa0522060:intron | 25.0% |
!!! | TAAGAATCATGCTTTTTTTG+TGG | - | chr3_4:75122685-75122704 | None:intergenic | 25.0% |
!! | CTTATGAAATTGTTTGTTAC+AGG | + | chr3_4:75122701-75122720 | Msa0522060:intron | 25.0% |
!! | AAATACATATCCCTTTTTGA+TGG | + | chr3_4:75122864-75122883 | Msa0522060:CDS | 25.0% |
! | TACACGTGTTATATCATTTA+AGG | + | chr3_4:75122963-75122982 | Msa0522060:intron | 25.0% |
!! | ATTTCCTTTTACAATGTGTT+GGG | - | chr3_4:75123290-75123309 | None:intergenic | 25.0% |
! | ATTGTAAAAGGAAATGAAGA+TGG | + | chr3_4:75123295-75123314 | Msa0522060:CDS | 25.0% |
! | GATGCATTATATATTTAGGA+TGG | + | chr3_4:75123669-75123688 | Msa0522060:intron | 25.0% |
!! | TTTTTGTTGATCCACTTAAA+TGG | - | chr3_4:75123834-75123853 | None:intergenic | 25.0% |
! | TTAAGTGGATCAACAAAAAA+TGG | + | chr3_4:75123835-75123854 | Msa0522060:CDS | 25.0% |
! | ACAATGAATACATGAAAATC+AGG | - | chr3_4:75124237-75124256 | None:intergenic | 25.0% |
! | TATATCGCATCTATTAGTTA+TGG | + | chr3_4:75124323-75124342 | Msa0522060:CDS | 25.0% |
! | ATATCGCATCTATTAGTTAT+GGG | + | chr3_4:75124324-75124343 | Msa0522060:CDS | 25.0% |
!! | TTAGATCTTTTGTGTCAATT+GGG | + | chr3_4:75124603-75124622 | Msa0522060:three_prime_UTR | 25.0% |
!! | GAAGTATCGTATATAAGAGA+GGG | - | chr3_4:75119560-75119579 | None:intergenic | 30.0% |
!! | TGAAGTATCGTATATAAGAG+AGG | - | chr3_4:75119561-75119580 | None:intergenic | 30.0% |
! | CACAATGTTTTCGATTTTCT+CGG | - | chr3_4:75119797-75119816 | None:intergenic | 30.0% |
!! | TAATTACAGATTCAAGTTGG+TGG | + | chr3_4:75120196-75120215 | Msa0522060:intron | 30.0% |
TATAGATTAGATAGGAAGCT+TGG | + | chr3_4:75120229-75120248 | Msa0522060:CDS | 30.0% | |
ATAGATTAGATAGGAAGCTT+GGG | + | chr3_4:75120230-75120249 | Msa0522060:CDS | 30.0% | |
! | ATAGATACATGTTGCCATTT+GGG | + | chr3_4:75120356-75120375 | Msa0522060:intron | 30.0% |
AAAAAATTCAGACACCCAAA+TGG | - | chr3_4:75120373-75120392 | None:intergenic | 30.0% | |
GGAAAAAATTTGTACACCAA+AGG | + | chr3_4:75120523-75120542 | Msa0522060:intron | 30.0% | |
ATAAAAGTCATAGATGCCTT+TGG | - | chr3_4:75120542-75120561 | None:intergenic | 30.0% | |
TTAATGCTACCTGCAATTAT+TGG | - | chr3_4:75120585-75120604 | None:intergenic | 30.0% | |
CTCTATTGAAACAGAAAAGA+GGG | - | chr3_4:75120681-75120700 | None:intergenic | 30.0% | |
ACTCTATTGAAACAGAAAAG+AGG | - | chr3_4:75120682-75120701 | None:intergenic | 30.0% | |
! | TCTTTTCTGTTTCAATAGAG+TGG | + | chr3_4:75120681-75120700 | Msa0522060:intron | 30.0% |
!!! | CTCACTTTTTATAGCACATT+AGG | + | chr3_4:75120754-75120773 | Msa0522060:intron | 30.0% |
! | ACTTTTTATAGCACATTAGG+TGG | + | chr3_4:75120757-75120776 | Msa0522060:intron | 30.0% |
TGTAACATAATGTTACACAC+AGG | + | chr3_4:75120898-75120917 | Msa0522060:intron | 30.0% | |
TAGATCCGAAAAAAGAACTA+AGG | - | chr3_4:75121057-75121076 | None:intergenic | 30.0% | |
!!! | TTAGTTCTTTTTTCGGATCT+AGG | + | chr3_4:75121056-75121075 | Msa0522060:intron | 30.0% |
CTTTACTAACAGATTGTCTA+TGG | + | chr3_4:75121202-75121221 | Msa0522060:intron | 30.0% | |
TTACTAACAGATTGTCTATG+GGG | + | chr3_4:75121204-75121223 | Msa0522060:intron | 30.0% | |
AACACCCAAATGATAACATA+AGG | - | chr3_4:75121251-75121270 | None:intergenic | 30.0% | |
!!! | AGTTTTTTTTTTTTACCCCG+AGG | + | chr3_4:75121344-75121363 | Msa0522060:intron | 30.0% |
AAATAAATGTTGCTCAACCT+CGG | - | chr3_4:75121364-75121383 | None:intergenic | 30.0% | |
! | AAATTCTTCTGATTTAGCTC+TGG | + | chr3_4:75121421-75121440 | Msa0522060:intron | 30.0% |
! | TACTAAATTAAGTGTTGTGG+AGG | + | chr3_4:75121474-75121493 | Msa0522060:intron | 30.0% |
! | AGGTTTCTTTTTATCCAGTA+GGG | + | chr3_4:75121524-75121543 | Msa0522060:intron | 30.0% |
ATTTACTAATTGACCATTGC+AGG | - | chr3_4:75121976-75121995 | None:intergenic | 30.0% | |
TTACTAACATTGGTATTGCA+TGG | - | chr3_4:75122030-75122049 | None:intergenic | 30.0% | |
!! | AAACAACTTTTTCTCATCAG+GGG | - | chr3_4:75122213-75122232 | None:intergenic | 30.0% |
!! | GAAACAACTTTTTCTCATCA+GGG | - | chr3_4:75122214-75122233 | None:intergenic | 30.0% |
!! | AGAAACAACTTTTTCTCATC+AGG | - | chr3_4:75122215-75122234 | None:intergenic | 30.0% |
! | TGATGAGAAAAAGTTGTTTC+TGG | + | chr3_4:75122214-75122233 | Msa0522060:CDS | 30.0% |
!! | TTGACAATGAAAGCATCAAA+GGG | - | chr3_4:75122277-75122296 | None:intergenic | 30.0% |
!! | ATTGACAATGAAAGCATCAA+AGG | - | chr3_4:75122278-75122297 | None:intergenic | 30.0% |
GAACAAACCTAAATACATCT+GGG | - | chr3_4:75122387-75122406 | None:intergenic | 30.0% | |
AGAACAAACCTAAATACATC+TGG | - | chr3_4:75122388-75122407 | None:intergenic | 30.0% | |
TGTATATCATATTCTTGGCA+GGG | + | chr3_4:75122466-75122485 | Msa0522060:intron | 30.0% | |
TTGTTACAGGGAGAAAATAA+AGG | + | chr3_4:75122714-75122733 | Msa0522060:intron | 30.0% | |
!! | ATAAAAGGGCTTTAAGAGTA+TGG | - | chr3_4:75122997-75123016 | None:intergenic | 30.0% |
! | ATACTCTTAAAGCCCTTTTA+TGG | + | chr3_4:75122996-75123015 | Msa0522060:intron | 30.0% |
! | TACTCTTAAAGCCCTTTTAT+GGG | + | chr3_4:75122997-75123016 | Msa0522060:intron | 30.0% |
! | CATTTCCTTTTACAATGTGT+TGG | - | chr3_4:75123291-75123310 | None:intergenic | 30.0% |
TGGTTTATTTATTAGCAGTG+TGG | + | chr3_4:75123315-75123334 | Msa0522060:CDS | 30.0% | |
AAATCATGAATCTGTTTCAC+AGG | + | chr3_4:75123539-75123558 | Msa0522060:intron | 30.0% | |
! | TTTTGACATTACAACCAATG+AGG | - | chr3_4:75123631-75123650 | None:intergenic | 30.0% |
! | TCATTGGTTGTAATGTCAAA+AGG | + | chr3_4:75123630-75123649 | Msa0522060:CDS | 30.0% |
AGATTTAAACACAACACTAC+TGG | - | chr3_4:75123730-75123749 | None:intergenic | 30.0% | |
ATAGGATTGTTGCATGTATT+GGG | - | chr3_4:75123793-75123812 | None:intergenic | 30.0% | |
TATAGGATTGTTGCATGTAT+TGG | - | chr3_4:75123794-75123813 | None:intergenic | 30.0% | |
AAAATAAAAGCAGCTTGATC+AGG | - | chr3_4:75124122-75124141 | None:intergenic | 30.0% | |
! | TTTTCCTAGTACTCATGTTA+AGG | + | chr3_4:75124199-75124218 | Msa0522060:CDS | 30.0% |
TTTACCTTAACATGAGTACT+AGG | - | chr3_4:75124206-75124225 | None:intergenic | 30.0% | |
AACTAATAGATGCGATATAG+AGG | - | chr3_4:75124322-75124341 | None:intergenic | 30.0% | |
CTACAAGAAATTTATCATGG+AGG | - | chr3_4:75124455-75124474 | None:intergenic | 30.0% | |
ATGATGACAACCATAAAGAA+AGG | - | chr3_4:75124514-75124533 | None:intergenic | 30.0% | |
! | CTTAGATCTTTTGTGTCAAT+TGG | + | chr3_4:75124602-75124621 | Msa0522060:three_prime_UTR | 30.0% |
! | ATGCAACTAAAATTTTCCAG+CGG | + | chr3_4:75124720-75124739 | Msa0522060:three_prime_UTR | 30.0% |
!! | TAGCTTTAAATCAAGAGGTA+AGG | - | chr3_4:75124792-75124811 | None:intergenic | 30.0% |
! | TAAACAACTTTTTGTCACCA+AGG | - | chr3_4:75124844-75124863 | None:intergenic | 30.0% |
TTGTAATAGCGTAATCATTG+TGG | + | chr3_4:75124877-75124896 | Msa0522060:three_prime_UTR | 30.0% | |
!! | GTAACCATATTGGTTTCTTT+GGG | + | chr3_4:75124910-75124929 | Msa0522060:three_prime_UTR | 30.0% |
AAAACCCAAAGAAACCAATA+TGG | - | chr3_4:75124917-75124936 | None:intergenic | 30.0% | |
TCTCAAGACATAAATATGGT+TGG | + | chr3_4:75124937-75124956 | Msa0522060:three_prime_UTR | 30.0% | |
AGTGTTTAGAGATCTGTGAT+GGG | - | chr3_4:75119464-75119483 | None:intergenic | 35.0% | |
AAGTGTTTAGAGATCTGTGA+TGG | - | chr3_4:75119465-75119484 | None:intergenic | 35.0% | |
TATTAGGGTTTGTGATGAGA+GGG | - | chr3_4:75119494-75119513 | None:intergenic | 35.0% | |
ATATTAGGGTTTGTGATGAG+AGG | - | chr3_4:75119495-75119514 | None:intergenic | 35.0% | |
ACACGATCGATGAGATATTA+GGG | - | chr3_4:75119509-75119528 | None:intergenic | 35.0% | |
ACTTCACTCATCAATGACTT+TGG | + | chr3_4:75119575-75119594 | Msa0522060:five_prime_UTR | 35.0% | |
AGTAGAGAGATTGAAAGAAG+AGG | + | chr3_4:75119837-75119856 | Msa0522060:CDS | 35.0% | |
CTTCACTATGAACATTTCTC+AGG | - | chr3_4:75120012-75120031 | None:intergenic | 35.0% | |
ATGGCAACATGTATCTATCA+CGG | - | chr3_4:75120354-75120373 | None:intergenic | 35.0% | |
GATAGATACATGTTGCCATT+TGG | + | chr3_4:75120355-75120374 | Msa0522060:intron | 35.0% | |
GATATTGCTCCAATAATTGC+AGG | + | chr3_4:75120573-75120592 | Msa0522060:intron | 35.0% | |
TTTGAGCATAGAAACAGCAA+AGG | + | chr3_4:75120607-75120626 | Msa0522060:CDS | 35.0% | |
TTGAGCATAGAAACAGCAAA+GGG | + | chr3_4:75120608-75120627 | Msa0522060:CDS | 35.0% | |
TGTGCTATAAAAAGTGAGCA+TGG | - | chr3_4:75120752-75120771 | None:intergenic | 35.0% | |
AGCACATACCATAATGTAGT+AGG | - | chr3_4:75120827-75120846 | None:intergenic | 35.0% | |
ATAATGTTACACACAGGTCA+TGG | + | chr3_4:75120904-75120923 | Msa0522060:intron | 35.0% | |
! | ATCTAGGATGTCTACTGAAA+TGG | + | chr3_4:75121072-75121091 | Msa0522060:intron | 35.0% |
TTAGAGAAGATGCATTGTAG+AGG | + | chr3_4:75121127-75121146 | Msa0522060:CDS | 35.0% | |
TAGAGAAGATGCATTGTAGA+GGG | + | chr3_4:75121128-75121147 | Msa0522060:CDS | 35.0% | |
TCTCGCCTTATGTTATCATT+TGG | + | chr3_4:75121243-75121262 | Msa0522060:intron | 35.0% | |
CTCGCCTTATGTTATCATTT+GGG | + | chr3_4:75121244-75121263 | Msa0522060:intron | 35.0% | |
!!! | TGTTCCGTTTTTTTACCTCA+TGG | + | chr3_4:75121267-75121286 | Msa0522060:intron | 35.0% |
!!! | GTTCCGTTTTTTTACCTCAT+GGG | + | chr3_4:75121268-75121287 | Msa0522060:intron | 35.0% |
!!! | TTCCGTTTTTTTACCTCATG+GGG | + | chr3_4:75121269-75121288 | Msa0522060:intron | 35.0% |
TTCCCCATGAGGTAAAAAAA+CGG | - | chr3_4:75121274-75121293 | None:intergenic | 35.0% | |
AATAAATGTTGCTCAACCTC+GGG | - | chr3_4:75121363-75121382 | None:intergenic | 35.0% | |
! | GAGGTTTCTTTTTATCCAGT+AGG | + | chr3_4:75121523-75121542 | Msa0522060:intron | 35.0% |
GAACTAATGAGAAAACTGCA+GGG | - | chr3_4:75121605-75121624 | None:intergenic | 35.0% | |
TGAACTAATGAGAAAACTGC+AGG | - | chr3_4:75121606-75121625 | None:intergenic | 35.0% | |
TGTGATTATGATAGGGACTT+GGG | + | chr3_4:75121777-75121796 | Msa0522060:intron | 35.0% | |
AAGTCCCAAATCAAGTAGTA+TGG | + | chr3_4:75121815-75121834 | Msa0522060:intron | 35.0% | |
CACACCATACTACTTGATTT+GGG | - | chr3_4:75121822-75121841 | None:intergenic | 35.0% | |
ACACACCATACTACTTGATT+TGG | - | chr3_4:75121823-75121842 | None:intergenic | 35.0% | |
AATCAAGTAGTATGGTGTGT+TGG | + | chr3_4:75121823-75121842 | Msa0522060:intron | 35.0% | |
ATCAAGTAGTATGGTGTGTT+GGG | + | chr3_4:75121824-75121843 | Msa0522060:intron | 35.0% | |
!!! | GGGTGAGTATTTTAGTAGAT+TGG | + | chr3_4:75121844-75121863 | Msa0522060:intron | 35.0% |
ATCCTAAAAGCTAGCTATCA+AGG | - | chr3_4:75121878-75121897 | None:intergenic | 35.0% | |
CAAAAACAAATTTGAGGGCA+TGG | - | chr3_4:75121942-75121961 | None:intergenic | 35.0% | |
!! | AAGTTGTTTCTGGTTGATCT+TGG | + | chr3_4:75122224-75122243 | Msa0522060:CDS | 35.0% |
!! | TTTCTGGTTGATCTTGGATT+AGG | + | chr3_4:75122230-75122249 | Msa0522060:CDS | 35.0% |
GCTGATCATAATCAACATGA+AGG | - | chr3_4:75122363-75122382 | None:intergenic | 35.0% | |
CTGTATATCATATTCTTGGC+AGG | + | chr3_4:75122465-75122484 | Msa0522060:intron | 35.0% | |
GTATATCATATTCTTGGCAG+GGG | + | chr3_4:75122467-75122486 | Msa0522060:intron | 35.0% | |
TCTTGTCTGCAAGAAAAAGA+TGG | + | chr3_4:75122740-75122759 | Msa0522060:CDS | 35.0% | |
ACAAAAGCAACACAAAGCTT+CGG | - | chr3_4:75122775-75122794 | None:intergenic | 35.0% | |
CTACATATTCTACAAACTGC+CGG | - | chr3_4:75122809-75122828 | None:intergenic | 35.0% | |
! | ATCCCTTTTTGATGGAATTG+TGG | + | chr3_4:75122872-75122891 | Msa0522060:CDS | 35.0% |
! | TCCCTTTTTGATGGAATTGT+GGG | + | chr3_4:75122873-75122892 | Msa0522060:CDS | 35.0% |
ACCCACAATTCCATCAAAAA+GGG | - | chr3_4:75122877-75122896 | None:intergenic | 35.0% | |
CACAACACAAACCCATAAAA+GGG | - | chr3_4:75123011-75123030 | None:intergenic | 35.0% | |
TCACAACACAAACCCATAAA+AGG | - | chr3_4:75123012-75123031 | None:intergenic | 35.0% | |
TGTTGTGAAGCTTATATGTC+AGG | + | chr3_4:75123024-75123043 | Msa0522060:intron | 35.0% | |
TGATGAACAACCAAAGAAGA+AGG | + | chr3_4:75123087-75123106 | Msa0522060:CDS | 35.0% | |
! | GCTCAAAACCTTTGTTTCAT+TGG | - | chr3_4:75123166-75123185 | None:intergenic | 35.0% |
!!! | GACTTTCTATATTTTGGCGT+AGG | + | chr3_4:75123233-75123252 | Msa0522060:intron | 35.0% |
CTTTCCCAACACATTGTAAA+AGG | + | chr3_4:75123283-75123302 | Msa0522060:CDS | 35.0% | |
ATGAATCTGTTTCACAGGAA+TGG | + | chr3_4:75123544-75123563 | Msa0522060:intron | 35.0% | |
!! | TGTTTCACAGGAATGGATTA+TGG | + | chr3_4:75123551-75123570 | Msa0522060:intron | 35.0% |
!! | AAACGAGTCACTGACTTTAT+AGG | - | chr3_4:75123811-75123830 | None:intergenic | 35.0% |
AGTGGATCAACAAAAAATGG+AGG | + | chr3_4:75123838-75123857 | Msa0522060:CDS | 35.0% | |
GTGGATCAACAAAAAATGGA+GGG | + | chr3_4:75123839-75123858 | Msa0522060:CDS | 35.0% | |
ATCAACAAAAAATGGAGGGA+AGG | + | chr3_4:75123843-75123862 | Msa0522060:CDS | 35.0% | |
!!! | AGGATTTTTTGTCACTGCTA+TGG | + | chr3_4:75123863-75123882 | Msa0522060:CDS | 35.0% |
TGGGAGAACAGTTTCATAAA+TGG | + | chr3_4:75124343-75124362 | Msa0522060:exon | 35.0% | |
GTATGCTACACCTTTCTTTA+TGG | + | chr3_4:75124501-75124520 | Msa0522060:three_prime_UTR | 35.0% | |
! | TGCAACTAAAATTTTCCAGC+GGG | + | chr3_4:75124721-75124740 | Msa0522060:three_prime_UTR | 35.0% |
ATTACGCTATTACAAACTGC+TGG | - | chr3_4:75124872-75124891 | None:intergenic | 35.0% | |
TCACAATAGCGTAACCATAT+TGG | + | chr3_4:75124900-75124919 | Msa0522060:three_prime_UTR | 35.0% | |
!! | CGTAACCATATTGGTTTCTT+TGG | + | chr3_4:75124909-75124928 | Msa0522060:three_prime_UTR | 35.0% |
! | TTTAGAGATCTGTGATGGGA+GGG | - | chr3_4:75119460-75119479 | None:intergenic | 40.0% |
GACACGATCGATGAGATATT+AGG | - | chr3_4:75119510-75119529 | None:intergenic | 40.0% | |
GAGAGATTGAAAGAAGAGGA+AGG | + | chr3_4:75119841-75119860 | Msa0522060:CDS | 40.0% | |
GGAAGGAGAGAATAAGAAGA+AGG | + | chr3_4:75119858-75119877 | Msa0522060:CDS | 40.0% | |
AGAGAATAAGAAGAAGGCAG+TGG | + | chr3_4:75119864-75119883 | Msa0522060:CDS | 40.0% | |
ATAAGAAGAAGGCAGTGGTT+AGG | + | chr3_4:75119869-75119888 | Msa0522060:CDS | 40.0% | |
TAAGAAGAAGGCAGTGGTTA+GGG | + | chr3_4:75119870-75119889 | Msa0522060:CDS | 40.0% | |
AGTTGTACTCCCTTCTTCTT+CGG | - | chr3_4:75119962-75119981 | None:intergenic | 40.0% | |
AAAATCACCTTCTCAGGAAG+TGG | - | chr3_4:75119985-75120004 | None:intergenic | 40.0% | |
GGAATCAAAATCACCTTCTC+AGG | - | chr3_4:75119991-75120010 | None:intergenic | 40.0% | |
TCTAGTTGAGTCAGACGTTA+TGG | + | chr3_4:75120100-75120119 | Msa0522060:intron | 40.0% | |
ATTAGATAGGAAGCTTGGGA+AGG | + | chr3_4:75120234-75120253 | Msa0522060:CDS | 40.0% | |
TTAGATAGGAAGCTTGGGAA+GGG | + | chr3_4:75120235-75120254 | Msa0522060:CDS | 40.0% | |
AAACACCGTACATACCTCAA+CGG | - | chr3_4:75120311-75120330 | None:intergenic | 40.0% | |
GTTGCTTCGGCACAAAATAA+CGG | - | chr3_4:75120468-75120487 | None:intergenic | 40.0% | |
!! | GTTATTTTGTGCCGAAGCAA+CGG | + | chr3_4:75120467-75120486 | Msa0522060:intron | 40.0% |
!! | TTATTTTGTGCCGAAGCAAC+GGG | + | chr3_4:75120468-75120487 | Msa0522060:intron | 40.0% |
CATATCTATTCCCGTTGCTT+CGG | - | chr3_4:75120481-75120500 | None:intergenic | 40.0% | |
! | AACAGCAAAGGGTGCAATTA+CGG | + | chr3_4:75120619-75120638 | Msa0522060:CDS | 40.0% |
TTGTAAACCTGCCATTCATG+TGG | - | chr3_4:75120649-75120668 | None:intergenic | 40.0% | |
TGTTCCACGAGTACATTACA+AGG | + | chr3_4:75120789-75120808 | Msa0522060:CDS | 40.0% | |
GTTCCACGAGTACATTACAA+GGG | + | chr3_4:75120790-75120809 | Msa0522060:CDS | 40.0% | |
!! | ATATGCTTGGCTCTAGTCTA+TGG | + | chr3_4:75120927-75120946 | Msa0522060:CDS | 40.0% |
!! | TATGCTTGGCTCTAGTCTAT+GGG | + | chr3_4:75120928-75120947 | Msa0522060:CDS | 40.0% |
TAGGATGTCTACTGAAATGG+TGG | + | chr3_4:75121075-75121094 | Msa0522060:intron | 40.0% | |
ATAAATGTTGCTCAACCTCG+GGG | - | chr3_4:75121362-75121381 | None:intergenic | 40.0% | |
! | AATTAAGTGTTGTGGAGGAG+AGG | + | chr3_4:75121479-75121498 | Msa0522060:intron | 40.0% |
! | AGAGGTTTCTTGTTATCCAG+AGG | + | chr3_4:75121497-75121516 | Msa0522060:intron | 40.0% |
! | GAGGTTTCTTGTTATCCAGA+GGG | + | chr3_4:75121498-75121517 | Msa0522060:intron | 40.0% |
! | AGGTTTCTTGTTATCCAGAG+GGG | + | chr3_4:75121499-75121518 | Msa0522060:intron | 40.0% |
! | TCTTTTTATCCAGTAGGGTG+AGG | + | chr3_4:75121529-75121548 | Msa0522060:intron | 40.0% |
CATTAGTTCATACTGAGAGC+AGG | + | chr3_4:75121616-75121635 | Msa0522060:intron | 40.0% | |
! | ACTTTTCATGAGCACATCTC+AGG | - | chr3_4:75121693-75121712 | None:intergenic | 40.0% |
CTGTGATTATGATAGGGACT+TGG | + | chr3_4:75121776-75121795 | Msa0522060:intron | 40.0% | |
TGATAGGGACTTGGGTATTA+TGG | + | chr3_4:75121785-75121804 | Msa0522060:intron | 40.0% | |
GATAGGGACTTGGGTATTAT+GGG | + | chr3_4:75121786-75121805 | Msa0522060:intron | 40.0% | |
CTAAAAGCTAGCTATCAAGG+AGG | - | chr3_4:75121875-75121894 | None:intergenic | 40.0% | |
!!! | CTCCTTGATAGCTAGCTTTT+AGG | + | chr3_4:75121873-75121892 | Msa0522060:intron | 40.0% |
ATATCTGCAACAACAACAGC+AGG | - | chr3_4:75122141-75122160 | None:intergenic | 40.0% | |
TGTTGTTGCAGATATGTGCA+TGG | + | chr3_4:75122146-75122165 | Msa0522060:intron | 40.0% | |
AAGCCTGAAAACTTCTTGCT+TGG | + | chr3_4:75122176-75122195 | Msa0522060:CDS | 40.0% | |
!! | GAAAGCATCAAAGGGTAACA+TGG | - | chr3_4:75122269-75122288 | None:intergenic | 40.0% |
! | TTTTCTACACAGCAACTCGT+TGG | + | chr3_4:75122320-75122339 | Msa0522060:intron | 40.0% |
ATCTTGGTAGAACAAGTAGC+AGG | + | chr3_4:75122519-75122538 | Msa0522060:CDS | 40.0% | |
ATAACCTGATATCCTTGCCA+AGG | - | chr3_4:75122602-75122621 | None:intergenic | 40.0% | |
CAAAAGCAACACAAAGCTTC+GGG | - | chr3_4:75122774-75122793 | None:intergenic | 40.0% | |
TATTCTACAAACTGCCGGAA+AGG | - | chr3_4:75122804-75122823 | None:intergenic | 40.0% | |
GACCCACAATTCCATCAAAA+AGG | - | chr3_4:75122878-75122897 | None:intergenic | 40.0% | |
GTGAAGCTTATATGTCAGGT+TGG | + | chr3_4:75123028-75123047 | Msa0522060:intron | 40.0% | |
TTCATCATCATCCTCTTCCA+TGG | - | chr3_4:75123074-75123093 | None:intergenic | 40.0% | |
CTCGAAGACCAATGAAACAA+AGG | + | chr3_4:75123155-75123174 | Msa0522060:CDS | 40.0% | |
GCGTAGGTATCATTACAATG+TGG | + | chr3_4:75123249-75123268 | Msa0522060:intron | 40.0% | |
TAGTCTTTGGGCACTCATTA+TGG | + | chr3_4:75123348-75123367 | Msa0522060:CDS | 40.0% | |
! | CTCTTCCAGTTTTCTTCACA+AGG | + | chr3_4:75123408-75123427 | Msa0522060:CDS | 40.0% |
! | TCCAGTTTTCTTCACAAGGT+TGG | + | chr3_4:75123412-75123431 | Msa0522060:intron | 40.0% |
ACCAACCTTGTGAAGAAAAC+TGG | - | chr3_4:75123416-75123435 | None:intergenic | 40.0% | |
!! | AGGAATGGATTATGGAACAG+TGG | + | chr3_4:75123559-75123578 | Msa0522060:intron | 40.0% |
!! | GGAATGGATTATGGAACAGT+GGG | + | chr3_4:75123560-75123579 | Msa0522060:intron | 40.0% |
TATTACATCAGTGCCATAGC+TGG | + | chr3_4:75123591-75123610 | Msa0522060:CDS | 40.0% | |
GTGACTCGTTTCCATTTAAG+TGG | + | chr3_4:75123820-75123839 | Msa0522060:CDS | 40.0% | |
TTCTCTCTAAACTCGATGCT+AGG | + | chr3_4:75124010-75124029 | Msa0522060:intron | 40.0% | |
TTCGATGAATACCTTCGCTA+GGG | - | chr3_4:75124058-75124077 | None:intergenic | 40.0% | |
! | CATCAGGTGGTTTTCTTCTT+GGG | - | chr3_4:75124151-75124170 | None:intergenic | 40.0% |
! | TCATCAGGTGGTTTTCTTCT+TGG | - | chr3_4:75124152-75124171 | None:intergenic | 40.0% |
GTTTCTTGAGTTTCATCAGG+TGG | - | chr3_4:75124164-75124183 | None:intergenic | 40.0% | |
AGCGTTTCTTGAGTTTCATC+AGG | - | chr3_4:75124167-75124186 | None:intergenic | 40.0% | |
TACTAGGAAAATCAGACGTG+CGG | - | chr3_4:75124190-75124209 | None:intergenic | 40.0% | |
TGTAGAATGCAGTTCAGCAT+TGG | + | chr3_4:75124470-75124489 | Msa0522060:three_prime_UTR | 40.0% | |
! | TAAAATTTTCCAGCGGGAAC+TGG | + | chr3_4:75124727-75124746 | Msa0522060:three_prime_UTR | 40.0% |
! | AAAATTTTCCAGCGGGAACT+GGG | + | chr3_4:75124728-75124747 | Msa0522060:three_prime_UTR | 40.0% |
AAAAGAGCCAAGTACAAGGT+AGG | - | chr3_4:75124767-75124786 | None:intergenic | 40.0% | |
GGATAAAAGAGCCAAGTACA+AGG | - | chr3_4:75124771-75124790 | None:intergenic | 40.0% | |
!! | CGGAGTAGCTTTAAATCAAG+AGG | - | chr3_4:75124797-75124816 | None:intergenic | 40.0% |
! | CTTGATTTAAAGCTACTCCG+AGG | + | chr3_4:75124797-75124816 | Msa0522060:three_prime_UTR | 40.0% |
AAGGCCAAATTCAGACATTG+AGG | - | chr3_4:75124825-75124844 | None:intergenic | 40.0% | |
TCAATGTCTGAATTTGGCCT+TGG | + | chr3_4:75124824-75124843 | Msa0522060:three_prime_UTR | 40.0% | |
! | GTTTAGAGATCTGTGATGGG+AGG | - | chr3_4:75119461-75119480 | None:intergenic | 45.0% |
GGTTTGTGATGAGAGGGAAA+TGG | - | chr3_4:75119488-75119507 | None:intergenic | 45.0% | |
GCGAATCTCTCTCATCTTCA+TGG | + | chr3_4:75119605-75119624 | Msa0522060:five_prime_UTR | 45.0% | |
! | AGGCATCGTAAAGATAGCGT+TGG | - | chr3_4:75119632-75119651 | None:intergenic | 45.0% |
GTGAATAACGACGACGAAAC+AGG | + | chr3_4:75119814-75119833 | Msa0522060:CDS | 45.0% | |
! | AGTGGTTAGGGTTTCTAGAG+AGG | + | chr3_4:75119882-75119901 | Msa0522060:CDS | 45.0% |
! | GGTTTCTAGAGAGGAAGCTA+TGG | + | chr3_4:75119891-75119910 | Msa0522060:CDS | 45.0% |
GCTATGGATGAGTACGATAG+TGG | + | chr3_4:75119907-75119926 | Msa0522060:CDS | 45.0% | |
! | ATGGATGAGTACGATAGTGG+TGG | + | chr3_4:75119910-75119929 | Msa0522060:CDS | 45.0% |
TACAACTCCACTTCCTGAGA+AGG | + | chr3_4:75119975-75119994 | Msa0522060:CDS | 45.0% | |
GGATTTGGGCAAGTCTATGT+TGG | + | chr3_4:75120259-75120278 | Msa0522060:CDS | 45.0% | |
GGTGTTTATGTCTGCCATTG+TGG | + | chr3_4:75120324-75120343 | Msa0522060:intron | 45.0% | |
CGAAGCAACGGGAATAGATA+TGG | + | chr3_4:75120479-75120498 | Msa0522060:intron | 45.0% | |
ATTACGGACCTCCACATGAA+TGG | + | chr3_4:75120635-75120654 | Msa0522060:CDS | 45.0% | |
TAAACCTGCCATTCATGTGG+AGG | - | chr3_4:75120646-75120665 | None:intergenic | 45.0% | |
AGCACATTAGGTGGTAGTCA+TGG | + | chr3_4:75120766-75120785 | Msa0522060:intron | 45.0% | |
CACGAGTACATTACAAGGGA+CGG | + | chr3_4:75120794-75120813 | Msa0522060:CDS | 45.0% | |
! | GCAAGGTGCCTACTACATTA+TGG | + | chr3_4:75120816-75120835 | Msa0522060:CDS | 45.0% |
GGGGTTTCTATTGTCTCTGA+AGG | + | chr3_4:75120871-75120890 | Msa0522060:intron | 45.0% | |
ACACAGGTCATGGATATGCT+TGG | + | chr3_4:75120914-75120933 | Msa0522060:intron | 45.0% | |
GCTCTAGTCTATGGGATGTT+TGG | + | chr3_4:75120936-75120955 | Msa0522060:CDS | 45.0% | |
GATAACATAAGGCGAGACTC+AGG | - | chr3_4:75121240-75121259 | None:intergenic | 45.0% | |
ATTGAACGTGTTTCCCCATG+AGG | - | chr3_4:75121285-75121304 | None:intergenic | 45.0% | |
AAAAAGAAACCTCACCCCTC+TGG | - | chr3_4:75121516-75121535 | None:intergenic | 45.0% | |
TAAGCTTGACACACTGATCC+TGG | - | chr3_4:75121570-75121589 | None:intergenic | 45.0% | |
GACAAGTATCTGAGCACTTG+AGG | - | chr3_4:75121902-75121921 | None:intergenic | 45.0% | |
TAATTGACCATTGCAGGCAG+GGG | - | chr3_4:75121970-75121989 | None:intergenic | 45.0% | |
CTAATTGACCATTGCAGGCA+GGG | - | chr3_4:75121971-75121990 | None:intergenic | 45.0% | |
ACTAATTGACCATTGCAGGC+AGG | - | chr3_4:75121972-75121991 | None:intergenic | 45.0% | |
! | GGTCCAAGCAAGAAGTTTTC+AGG | - | chr3_4:75122182-75122201 | None:intergenic | 45.0% |
AAACTTCTTGCTTGGACCCT+CGG | + | chr3_4:75122184-75122203 | Msa0522060:CDS | 45.0% | |
ATCAGCGCCCAGATGTATTT+AGG | + | chr3_4:75122377-75122396 | Msa0522060:CDS | 45.0% | |
AAGTAGCAGGAGAGATGACT+TGG | + | chr3_4:75122532-75122551 | Msa0522060:CDS | 45.0% | |
GAAGACAAGCGTGTAAGCAA+GGG | - | chr3_4:75122561-75122580 | None:intergenic | 45.0% | |
TTGTCTTCCTTCTTCGTGGT+CGG | + | chr3_4:75122573-75122592 | Msa0522060:CDS | 45.0% | |
GTTACCTTGGCAAGGATATC+AGG | + | chr3_4:75122595-75122614 | Msa0522060:CDS | 45.0% | |
TGGGTCCAAATCCTGACATT+AGG | + | chr3_4:75122892-75122911 | Msa0522060:CDS | 45.0% | |
GTATTTAGGGGCCTAATGTC+AGG | - | chr3_4:75122906-75122925 | None:intergenic | 45.0% | |
ATTAGGCCCCTAAATACCGA+GGG | + | chr3_4:75122909-75122928 | Msa0522060:CDS | 45.0% | |
!! | TGTCAGGTTGGACAAAAGAG+AGG | + | chr3_4:75123040-75123059 | Msa0522060:intron | 45.0% |
AAAGAGAGGACGATTGACCA+TGG | + | chr3_4:75123054-75123073 | Msa0522060:CDS | 45.0% | |
ACCAAAGAAGAAGGTCCGAA+TGG | + | chr3_4:75123096-75123115 | Msa0522060:CDS | 45.0% | |
CCAAAGAAGAAGGTCCGAAT+GGG | + | chr3_4:75123097-75123116 | Msa0522060:CDS | 45.0% | |
ACACTAATCCACTGTGTTGC+TGG | - | chr3_4:75123127-75123146 | None:intergenic | 45.0% | |
ATTACAATGTGGCCGATGAG+CGG | + | chr3_4:75123260-75123279 | Msa0522060:CDS | 45.0% | |
!! | TGGCTTCTTGTGCTAGTCTT+TGG | + | chr3_4:75123335-75123354 | Msa0522060:CDS | 45.0% |
!! | GGCTTCTTGTGCTAGTCTTT+GGG | + | chr3_4:75123336-75123355 | Msa0522060:CDS | 45.0% |
TGTGATCTGCTGTTCCTTAC+AGG | + | chr3_4:75123765-75123784 | Msa0522060:intron | 45.0% | |
GTGATCTGCTGTTCCTTACA+GGG | + | chr3_4:75123766-75123785 | Msa0522060:intron | 45.0% | |
CTAAACTCGATGCTAGGTTG+TGG | + | chr3_4:75124016-75124035 | Msa0522060:intron | 45.0% | |
CTTCGATGAATACCTTCGCT+AGG | - | chr3_4:75124059-75124078 | None:intergenic | 45.0% | |
!! | CTAGCGAAGGTATTCATCGA+AGG | + | chr3_4:75124057-75124076 | Msa0522060:CDS | 45.0% |
!! | CGAAGGTATTCATCGAAGGT+GGG | + | chr3_4:75124061-75124080 | Msa0522060:CDS | 45.0% |
TTGCAGCAGTTGCAGTAATG+CGG | - | chr3_4:75124097-75124116 | None:intergenic | 45.0% | |
! | GCAAGCGGGAATTTTGCAAT+AGG | - | chr3_4:75124404-75124423 | None:intergenic | 45.0% |
AACTCAGATGTGTAGGCAAG+CGG | - | chr3_4:75124419-75124438 | None:intergenic | 45.0% | |
CTTGCCTACACATCTGAGTT+GGG | + | chr3_4:75124419-75124438 | Msa0522060:three_prime_UTR | 45.0% | |
AGTTCCCAACTCAGATGTGT+AGG | - | chr3_4:75124426-75124445 | None:intergenic | 45.0% | |
AAGTAGGCCTACCTTGTACT+TGG | + | chr3_4:75124757-75124776 | Msa0522060:three_prime_UTR | 45.0% | |
ATTCAGACATTGAGGAGCCT+CGG | - | chr3_4:75124817-75124836 | None:intergenic | 45.0% | |
GGCTCCTCAATGTCTGAATT+TGG | + | chr3_4:75124818-75124837 | Msa0522060:three_prime_UTR | 45.0% | |
!!! | ATTTTTTTTTATAAAATGTA+AGG | + | chr3_4:75120433-75120452 | Msa0522060:intron | 5.0% |
!!! | TTTTTTTTTATAAAATGTAA+GGG | + | chr3_4:75120434-75120453 | Msa0522060:intron | 5.0% |
!! | TTATATTTATTATTTATACA+TGG | + | chr3_4:75121174-75121193 | Msa0522060:intron | 5.0% |
!! | TATATTTATTATTTATACAT+GGG | + | chr3_4:75121175-75121194 | Msa0522060:intron | 5.0% |
TGAGACGGTTTATGCGAGGT+CGG | - | chr3_4:75119666-75119685 | None:intergenic | 50.0% | |
TCAGTGAGACGGTTTATGCG+AGG | - | chr3_4:75119670-75119689 | None:intergenic | 50.0% | |
AAGCTTGGGAAGGGAGGATT+TGG | + | chr3_4:75120244-75120263 | Msa0522060:CDS | 50.0% | |
AGCTTGGGAAGGGAGGATTT+GGG | + | chr3_4:75120245-75120264 | Msa0522060:CDS | 50.0% | |
!! | TGGTGCCGTTGAGGTATGTA+CGG | + | chr3_4:75120303-75120322 | Msa0522060:intron | 50.0% |
! | TCTATCACGGAGCACCACAA+TGG | - | chr3_4:75120341-75120360 | None:intergenic | 50.0% |
CGTCCCTTGTAATGTACTCG+TGG | - | chr3_4:75120796-75120815 | None:intergenic | 50.0% | |
GTACATTACAAGGGACGGCA+AGG | + | chr3_4:75120799-75120818 | Msa0522060:CDS | 50.0% | |
GGTGGCATGTATTGCAATCG+AGG | + | chr3_4:75121093-75121112 | Msa0522060:CDS | 50.0% | |
! | GAGGGTGAGACTCATTTTCC+TGG | + | chr3_4:75121146-75121165 | Msa0522060:intron | 50.0% |
! | TCTTGTTATCCAGAGGGGTG+AGG | + | chr3_4:75121504-75121523 | Msa0522060:intron | 50.0% |
TAGGGTGAGGTCCATGCTAA+GGG | + | chr3_4:75121542-75121561 | Msa0522060:intron | 50.0% | |
TGATCCTGGTACCCTTAGCA+TGG | - | chr3_4:75121556-75121575 | None:intergenic | 50.0% | |
! | AACCCAAGTTCCACTTGCTG+TGG | + | chr3_4:75121643-75121662 | Msa0522060:intron | 50.0% |
!! | TTCCACTTGCTGTGGCCTAT+GGG | + | chr3_4:75121651-75121670 | Msa0522060:intron | 50.0% |
AACTTCTTGCTTGGACCCTC+GGG | + | chr3_4:75122185-75122204 | Msa0522060:CDS | 50.0% | |
CGTTGGCGTGATAGTTCAAC+TGG | + | chr3_4:75122337-75122356 | Msa0522060:CDS | 50.0% | |
GCTAGTGTGCATGCACATCT+TGG | + | chr3_4:75122503-75122522 | Msa0522060:CDS | 50.0% | |
GGAAGACAAGCGTGTAAGCA+AGG | - | chr3_4:75122562-75122581 | None:intergenic | 50.0% | |
ACGCTTGTCTTCCTTCTTCG+TGG | + | chr3_4:75122569-75122588 | Msa0522060:CDS | 50.0% | |
AAGGTAACCGACCACGAAGA+AGG | - | chr3_4:75122583-75122602 | None:intergenic | 50.0% | |
TTCTTCGTGGTCGGTTACCT+TGG | + | chr3_4:75122582-75122601 | Msa0522060:CDS | 50.0% | |
ACACAAAGCTTCGGGTGAAG+TGG | - | chr3_4:75122766-75122785 | None:intergenic | 50.0% | |
! | GCTTTTGTCCTGCACCTTTC+CGG | + | chr3_4:75122787-75122806 | Msa0522060:CDS | 50.0% |
AGGGGCCTAATGTCAGGATT+TGG | - | chr3_4:75122900-75122919 | None:intergenic | 50.0% | |
CATTAGGCCCCTAAATACCG+AGG | + | chr3_4:75122908-75122927 | Msa0522060:CDS | 50.0% | |
TGAGCACCCTCGGTATTTAG+GGG | - | chr3_4:75122918-75122937 | None:intergenic | 50.0% | |
CTGAGCACCCTCGGTATTTA+GGG | - | chr3_4:75122919-75122938 | None:intergenic | 50.0% | |
TCTGAGCACCCTCGGTATTT+AGG | - | chr3_4:75122920-75122939 | None:intergenic | 50.0% | |
!! | AAATACCGAGGGTGCTCAGA+AGG | + | chr3_4:75122920-75122939 | Msa0522060:CDS | 50.0% |
AAGTACCTTCTGAGCACCCT+CGG | - | chr3_4:75122928-75122947 | None:intergenic | 50.0% | |
AGGACGATTGACCATGGAAG+AGG | + | chr3_4:75123060-75123079 | Msa0522060:CDS | 50.0% | |
CCCATTCGGACCTTCTTCTT+TGG | - | chr3_4:75123100-75123119 | None:intergenic | 50.0% | |
TGGGCACTCATTATGGATGC+TGG | + | chr3_4:75123355-75123374 | Msa0522060:CDS | 50.0% | |
CTCATTATGGATGCTGGCAC+TGG | + | chr3_4:75123361-75123380 | Msa0522060:CDS | 50.0% | |
GCCATAGCTGGAGCTAGTAA+CGG | + | chr3_4:75123603-75123622 | Msa0522060:CDS | 50.0% | |
CCATAGCTGGAGCTAGTAAC+GGG | + | chr3_4:75123604-75123623 | Msa0522060:CDS | 50.0% | |
!! | AGCTAGTAACGGGTCCTCAT+TGG | + | chr3_4:75123614-75123633 | Msa0522060:CDS | 50.0% |
GCATGTATTGGGTCCCTGTA+AGG | - | chr3_4:75123782-75123801 | None:intergenic | 50.0% | |
CTCTGTAAATCCAGCACCAC+GGG | - | chr3_4:75123922-75123941 | None:intergenic | 50.0% | |
GCTCTGTAAATCCAGCACCA+CGG | - | chr3_4:75123923-75123942 | None:intergenic | 50.0% | |
! | TGGTGCTGGATTTACAGAGC+AGG | + | chr3_4:75123923-75123942 | Msa0522060:CDS | 50.0% |
GATTTCCTGTACCCTAGCGA+AGG | + | chr3_4:75124044-75124063 | Msa0522060:CDS | 50.0% | |
GAATACCTTCGCTAGGGTAC+AGG | - | chr3_4:75124052-75124071 | None:intergenic | 50.0% | |
!! | GCGAAGGTATTCATCGAAGG+TGG | + | chr3_4:75124060-75124079 | Msa0522060:CDS | 50.0% |
ACTCAGATGTGTAGGCAAGC+GGG | - | chr3_4:75124418-75124437 | None:intergenic | 50.0% | |
GCTTGCCTACACATCTGAGT+TGG | + | chr3_4:75124418-75124437 | Msa0522060:three_prime_UTR | 50.0% | |
! | GGGAACTGGGTGCTATAAGT+AGG | + | chr3_4:75124741-75124760 | Msa0522060:three_prime_UTR | 50.0% |
GAGACGGTTTATGCGAGGTC+GGG | - | chr3_4:75119665-75119684 | None:intergenic | 55.0% | |
ATTCCTTCTGGTCTGTGCGG+CGG | - | chr3_4:75119737-75119756 | None:intergenic | 55.0% | |
CCGATTCCTTCTGGTCTGTG+CGG | - | chr3_4:75119740-75119759 | None:intergenic | 55.0% | |
CCGCACAGACCAGAAGGAAT+CGG | + | chr3_4:75119737-75119756 | Msa0522060:CDS | 55.0% | |
CACAGACCAGAAGGAATCGG+AGG | + | chr3_4:75119740-75119759 | Msa0522060:CDS | 55.0% | |
CTTCTGCCTCCGATTCCTTC+TGG | - | chr3_4:75119749-75119768 | None:intergenic | 55.0% | |
! | CCGGAGCTTTATCGGCACTA+CGG | - | chr3_4:75119936-75119955 | None:intergenic | 55.0% |
!! | CCGTAGTGCCGATAAAGCTC+CGG | + | chr3_4:75119933-75119952 | Msa0522060:CDS | 55.0% |
!! | CGTAGTGCCGATAAAGCTCC+GGG | + | chr3_4:75119934-75119953 | Msa0522060:CDS | 55.0% |
! | TTCGGCTCCCGGAGCTTTAT+CGG | - | chr3_4:75119944-75119963 | None:intergenic | 55.0% |
GATAGGAAGCTTGGGAAGGG+AGG | + | chr3_4:75120238-75120257 | Msa0522060:CDS | 55.0% | |
! | GAGTGGAGCTGCTTTGCTGA+AGG | + | chr3_4:75120698-75120717 | Msa0522060:intron | 55.0% |
TAGCATGGACCTCACCCTAC+TGG | - | chr3_4:75121541-75121560 | None:intergenic | 55.0% | |
GTAGGGTGAGGTCCATGCTA+AGG | + | chr3_4:75121541-75121560 | Msa0522060:intron | 55.0% | |
!! | AGGTCCATGCTAAGGGTACC+AGG | + | chr3_4:75121549-75121568 | Msa0522060:intron | 55.0% |
GGCCACAGCAAGTGGAACTT+GGG | - | chr3_4:75121648-75121667 | None:intergenic | 55.0% | |
AGGCCACAGCAAGTGGAACT+TGG | - | chr3_4:75121649-75121668 | None:intergenic | 55.0% | |
!! | GTTCCACTTGCTGTGGCCTA+TGG | + | chr3_4:75121650-75121669 | Msa0522060:intron | 55.0% |
!! | TCCACTTGCTGTGGCCTATG+GGG | + | chr3_4:75121652-75121671 | Msa0522060:intron | 55.0% |
GCCTATGGGGTGAACCTGTT+TGG | + | chr3_4:75121665-75121684 | Msa0522060:intron | 55.0% | |
GCCAAACAGGTTCACCCCAT+AGG | - | chr3_4:75121669-75121688 | None:intergenic | 55.0% | |
GCACATCTCAGGTGCCAAAC+AGG | - | chr3_4:75121682-75121701 | None:intergenic | 55.0% | |
TGTTCTTCCCCTGCCTGCAA+TGG | + | chr3_4:75121960-75121979 | Msa0522060:intron | 55.0% | |
TTCTCATCAGGGGTTCCCGA+GGG | - | chr3_4:75122203-75122222 | None:intergenic | 55.0% | |
TTTCTCATCAGGGGTTCCCG+AGG | - | chr3_4:75122204-75122223 | None:intergenic | 55.0% | |
! | ACAAACTGCCGGAAAGGTGC+AGG | - | chr3_4:75122798-75122817 | None:intergenic | 55.0% |
!! | GAGGGTGCTCAGAAGGTACT+TGG | + | chr3_4:75122927-75122946 | Msa0522060:intron | 55.0% |
! | GTGTTGCTGGCTGACCCATT+CGG | - | chr3_4:75123114-75123133 | None:intergenic | 55.0% |
GTGTTGGGAAAGCCGCTCAT+CGG | - | chr3_4:75123275-75123294 | None:intergenic | 55.0% | |
CCCGTTACTAGCTCCAGCTA+TGG | - | chr3_4:75123607-75123626 | None:intergenic | 55.0% | |
TGGGCAATCGTTATGTCCCG+TGG | + | chr3_4:75123903-75123922 | Msa0522060:CDS | 55.0% | |
ATCGTTATGTCCCGTGGTGC+TGG | + | chr3_4:75123909-75123928 | Msa0522060:CDS | 55.0% | |
TTATAGCACCCAGTTCCCGC+TGG | - | chr3_4:75124739-75124758 | None:intergenic | 55.0% | |
GCGGCGCGTTATCAGTGAGA+CGG | - | chr3_4:75119681-75119700 | None:intergenic | 60.0% | |
! | TCTCACTGATAACGCGCCGC+CGG | + | chr3_4:75119681-75119700 | Msa0522060:CDS | 60.0% |
CTCCGGGAGCCGAAGAAGAA+GGG | + | chr3_4:75119950-75119969 | Msa0522060:CDS | 60.0% | |
CTCCCTTCTTCTTCGGCTCC+CGG | - | chr3_4:75119955-75119974 | None:intergenic | 60.0% | |
GTCTATGTTGGCCGACGCGT+AGG | + | chr3_4:75120271-75120290 | Msa0522060:CDS | 60.0% | |
CAGAACCAGGTCCTACGCGT+CGG | - | chr3_4:75120285-75120304 | None:intergenic | 60.0% | |
!! | ACCTGGTTCTGGTGCCGTTG+AGG | + | chr3_4:75120294-75120313 | Msa0522060:CDS | 60.0% |
ACCTCAACGGCACCAGAACC+AGG | - | chr3_4:75120298-75120317 | None:intergenic | 60.0% | |
CGGACCTCCACATGAATGGC+AGG | + | chr3_4:75120639-75120658 | Msa0522060:CDS | 60.0% | |
TAAGGCGAGACTCAGGCAGC+AGG | - | chr3_4:75121233-75121252 | None:intergenic | 60.0% | |
ACCCCATAGGCCACAGCAAG+TGG | - | chr3_4:75121656-75121675 | None:intergenic | 60.0% | |
CGTGGTCGGTTACCTTGGCA+AGG | + | chr3_4:75122587-75122606 | Msa0522060:CDS | 60.0% | |
TGGGTCAGCCAGCAACACAG+TGG | + | chr3_4:75123116-75123135 | Msa0522060:CDS | 60.0% | |
GTCACTGCTATGGCCACTGC+TGG | + | chr3_4:75123873-75123892 | Msa0522060:CDS | 60.0% | |
TGGCCACTGCTGGCACTAGA+TGG | + | chr3_4:75123883-75123902 | Msa0522060:CDS | 60.0% | |
GGCCACTGCTGGCACTAGAT+GGG | + | chr3_4:75123884-75123903 | Msa0522060:CDS | 60.0% | |
TGCCCATCTAGTGCCAGCAG+TGG | - | chr3_4:75123889-75123908 | None:intergenic | 60.0% | |
CGAGGTCGGGTACGCAACTC+AGG | - | chr3_4:75119652-75119671 | None:intergenic | 65.0% | |
GCTCCGGGAGCCGAAGAAGA+AGG | + | chr3_4:75119949-75119968 | Msa0522060:CDS | 65.0% | |
CGACGCGTAGGACCTGGTTC+TGG | + | chr3_4:75120283-75120302 | Msa0522060:CDS | 65.0% | |
CCTTCTGGTCTGTGCGGCGG+TGG | - | chr3_4:75119734-75119753 | None:intergenic | 70.0% | |
CCACCGCCGCACAGACCAGA+AGG | + | chr3_4:75119731-75119750 | Msa0522060:CDS | 70.0% | |
GTTGGCCGACGCGTAGGACC+TGG | + | chr3_4:75120277-75120296 | Msa0522060:CDS | 70.0% | |
GATAACGCGCCGCCGGTCGC+CGG | + | chr3_4:75119688-75119707 | Msa0522060:CDS | 75.0% | |
AGCGACGGCTCTCCTCCCGC+CGG | - | chr3_4:75119710-75119729 | None:intergenic | 75.0% | |
CTGTGCGGCGGTGGCAGCGA+CGG | - | chr3_4:75119725-75119744 | None:intergenic | 75.0% | |
! | GCTCTCCTCCCGCCGGCGAC+CGG | - | chr3_4:75119703-75119722 | None:intergenic | 80.0% |
! | AACGCGCCGCCGGTCGCCGG+CGG | + | chr3_4:75119691-75119710 | Msa0522060:CDS | 85.0% |
! | CTCCTCCCGCCGGCGACCGG+CGG | - | chr3_4:75119700-75119719 | None:intergenic | 85.0% |
! | ACGCGCCGCCGGTCGCCGGC+GGG | + | chr3_4:75119692-75119711 | Msa0522060:CDS | 90.0% |
! | CGCCGCCGGTCGCCGGCGGG+AGG | + | chr3_4:75119695-75119714 | Msa0522060:CDS | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 75119399 | 75124974 | 75119399 | ID=Msa0522060;Name=Msa0522060 |
chr3_4 | mRNA | 75119399 | 75124974 | 75119399 | ID=Msa0522060-mRNA-1;Parent=Msa0522060;Name=Msa0522060-mRNA-1;_AED=0.13;_eAED=0.13;_QI=227|0.93|0.94|1|0.93|0.88|17|613|682 |
chr3_4 | exon | 75119399 | 75119518 | 75119399 | ID=Msa0522060-mRNA-1:exon:21393;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75119539 | 75119996 | 75119539 | ID=Msa0522060-mRNA-1:exon:21394;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75120205 | 75120315 | 75120205 | ID=Msa0522060-mRNA-1:exon:21395;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75120595 | 75120668 | 75120595 | ID=Msa0522060-mRNA-1:exon:21396;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75120768 | 75120837 | 75120768 | ID=Msa0522060-mRNA-1:exon:21397;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75120920 | 75120975 | 75120920 | ID=Msa0522060-mRNA-1:exon:21398;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75121078 | 75121149 | 75121078 | ID=Msa0522060-mRNA-1:exon:21399;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75122157 | 75122251 | 75122157 | ID=Msa0522060-mRNA-1:exon:21400;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75122332 | 75122398 | 75122332 | ID=Msa0522060-mRNA-1:exon:21401;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75122487 | 75122616 | 75122487 | ID=Msa0522060-mRNA-1:exon:21402;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75122723 | 75122941 | 75122723 | ID=Msa0522060-mRNA-1:exon:21403;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75123046 | 75123176 | 75123046 | ID=Msa0522060-mRNA-1:exon:21404;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75123255 | 75123429 | 75123255 | ID=Msa0522060-mRNA-1:exon:21405;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75123561 | 75123651 | 75123561 | ID=Msa0522060-mRNA-1:exon:21406;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75123787 | 75123944 | 75123787 | ID=Msa0522060-mRNA-1:exon:21407;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75124032 | 75124220 | 75124032 | ID=Msa0522060-mRNA-1:exon:21408;Parent=Msa0522060-mRNA-1 |
chr3_4 | exon | 75124302 | 75124974 | 75124302 | ID=Msa0522060-mRNA-1:exon:21409;Parent=Msa0522060-mRNA-1 |
chr3_4 | five_prime_UTR | 75119399 | 75119518 | 75119399 | ID=Msa0522060-mRNA-1:five_prime_utr;Parent=Msa0522060-mRNA-1 |
chr3_4 | five_prime_UTR | 75119539 | 75119645 | 75119539 | ID=Msa0522060-mRNA-1:five_prime_utr;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75119646 | 75119996 | 75119646 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75120205 | 75120315 | 75120205 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75120595 | 75120668 | 75120595 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75120768 | 75120837 | 75120768 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75120920 | 75120975 | 75120920 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75121078 | 75121149 | 75121078 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75122157 | 75122251 | 75122157 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75122332 | 75122398 | 75122332 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75122487 | 75122616 | 75122487 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75122723 | 75122941 | 75122723 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75123046 | 75123176 | 75123046 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75123255 | 75123429 | 75123255 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75123561 | 75123651 | 75123561 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75123787 | 75123944 | 75123787 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75124032 | 75124220 | 75124032 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | CDS | 75124302 | 75124361 | 75124302 | ID=Msa0522060-mRNA-1:cds;Parent=Msa0522060-mRNA-1 |
chr3_4 | three_prime_UTR | 75124362 | 75124974 | 75124362 | ID=Msa0522060-mRNA-1:three_prime_utr;Parent=Msa0522060-mRNA-1 |
Gene Sequence |
Protein sequence |