Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523670 | XP_003603883.2 | 81.777 | 439 | 10 | 5 | 1 | 436 | 1 | 372 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523670 | sp|Q0WNR6|ARID5_ARATH | 62.192 | 365 | 75 | 7 | 70 | 433 | 132 | 434 | 5.99e-141 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523670 | G7J6H5 | 81.777 | 439 | 10 | 5 | 1 | 436 | 1 | 372 | 0.0 | 667 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0523670 | TR | ARID |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523670 | MtrunA17_Chr3g0144341 | 81.777 | 439 | 10 | 5 | 1 | 436 | 1 | 372 | 0.0 | 667 |
| Msa0523670 | MtrunA17_Chr5g0407561 | 50.461 | 434 | 128 | 8 | 24 | 433 | 232 | 602 | 5.60e-129 | 385 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523670 | AT1G76510.2 | 62.192 | 365 | 75 | 7 | 70 | 433 | 132 | 434 | 6.09e-142 | 413 |
| Msa0523670 | AT1G76510.4 | 62.192 | 365 | 75 | 7 | 70 | 433 | 132 | 434 | 6.09e-142 | 413 |
| Msa0523670 | AT1G76510.1 | 62.192 | 365 | 75 | 7 | 70 | 433 | 132 | 434 | 6.09e-142 | 413 |
| Msa0523670 | AT1G76510.3 | 58.247 | 388 | 76 | 8 | 70 | 433 | 132 | 457 | 1.62e-134 | 396 |
| Msa0523670 | AT1G20910.1 | 57.143 | 364 | 95 | 5 | 70 | 433 | 96 | 398 | 1.68e-127 | 375 |
| Msa0523670 | AT2G17410.1 | 54.722 | 360 | 98 | 5 | 75 | 433 | 489 | 784 | 1.97e-116 | 358 |
| Msa0523670 | AT2G17410.3 | 54.722 | 360 | 98 | 5 | 75 | 433 | 489 | 784 | 1.97e-116 | 358 |
| Msa0523670 | AT2G17410.2 | 54.318 | 359 | 95 | 5 | 75 | 433 | 489 | 778 | 1.73e-115 | 356 |
| Msa0523670 | AT1G20910.2 | 55.389 | 334 | 88 | 5 | 70 | 403 | 96 | 368 | 2.16e-107 | 323 |
Find 138 sgRNAs with CRISPR-Local
Find 440 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAACGAAGAATGGATAAT+TGG | 0.174999 | 3_4:-77097646 | None:intergenic |
| GAAGTATATGCTCTAGTTCC+TGG | 0.233784 | 3_4:+77102261 | Msa0523670:CDS |
| TTGGCATGCTCAGCGCCTTA+TGG | 0.294765 | 3_4:+77100904 | Msa0523670:CDS |
| GCATATTGCACCAGTGCATT+TGG | 0.298638 | 3_4:-77103650 | None:intergenic |
| TCACTCTTCTTCCTCTTTCT+CGG | 0.301949 | 3_4:-77097524 | None:intergenic |
| GAAAAGCATAAGAGAGAGAT+TGG | 0.315271 | 3_4:+77099816 | Msa0523670:CDS |
| TTTGTAGACCGCTGTTTATC+AGG | 0.316112 | 3_4:+77100829 | Msa0523670:intron |
| CAATGGGACTTGATAAAACT+TGG | 0.325300 | 3_4:-77098342 | None:intergenic |
| GCAGCAGCAGCATCAGCAGC+AGG | 0.327412 | 3_4:-77098015 | None:intergenic |
| GTCCTTGGAGACTGCTCTTA+AGG | 0.330004 | 3_4:+77101567 | Msa0523670:CDS |
| CACTCTTCTTCCTCTTTCTC+GGG | 0.344145 | 3_4:-77097523 | None:intergenic |
| GTTGGACGACTTGTTATAAC+TGG | 0.347669 | 3_4:+77103096 | Msa0523670:CDS |
| TCTGTAACGTTCTTAACTTT+AGG | 0.348861 | 3_4:-77098105 | None:intergenic |
| GGGTATTACTCCCTTCAAAA+AGG | 0.360882 | 3_4:+77103146 | Msa0523670:CDS |
| ACGTTCTTAACTTTAGGTTT+TGG | 0.366210 | 3_4:-77098099 | None:intergenic |
| TGGCATGCTCAGCGCCTTAT+GGG | 0.389962 | 3_4:+77100905 | Msa0523670:CDS |
| CATATTGCACCAGTGCATTT+GGG | 0.390132 | 3_4:-77103649 | None:intergenic |
| ACACAGAGCAAATGTGGATT+GGG | 0.393147 | 3_4:+77101635 | Msa0523670:CDS |
| TTTCCTCCCCGGAAAATGAT+TGG | 0.394311 | 3_4:+77103484 | Msa0523670:three_prime_UTR |
| TGTGTGACGAATTGTTTGTT+TGG | 0.394982 | 3_4:-77097605 | None:intergenic |
| TTTCCACACTCGATGGTTGA+TGG | 0.396113 | 3_4:-77099866 | None:intergenic |
| GAGACAGGCAGTTAAGTTAC+TGG | 0.400210 | 3_4:+77101256 | Msa0523670:CDS |
| AGGTAGGGCGCGGAGGGATG+CGG | 0.401043 | 3_4:+77100862 | Msa0523670:CDS |
| ATCAATGGAGGGTCATGAAA+TGG | 0.404745 | 3_4:+77097939 | Msa0523670:exon |
| AACTAACAACAGCAGATGTT+TGG | 0.411334 | 3_4:-77103409 | None:intergenic |
| GGTTCCTGAGTCAGCTGTTA+AGG | 0.416729 | 3_4:+77100937 | Msa0523670:CDS |
| ATGCTCGAGCTCTTTCATAA+AGG | 0.418085 | 3_4:-77098285 | None:intergenic |
| AAAACGAAGAATGGATAATT+GGG | 0.420847 | 3_4:-77097645 | None:intergenic |
| CCATATGTTATTCAGGTCCT+TGG | 0.421166 | 3_4:+77101552 | Msa0523670:intron |
| CTCCGCGCCCTACCTGAGCC+TGG | 0.423147 | 3_4:-77100854 | None:intergenic |
| CAGAAAATGCTGACAATCCA+TGG | 0.427370 | 3_4:+77103124 | Msa0523670:CDS |
| GTTTATCAGGCTCCAGGCTC+AGG | 0.427487 | 3_4:+77100842 | Msa0523670:CDS |
| GTATTGATTCACAAAATAGT+AGG | 0.440988 | 3_4:-77101614 | None:intergenic |
| AAAAGCATAAGAGAGAGATT+GGG | 0.443286 | 3_4:+77099817 | Msa0523670:CDS |
| TTGATCTTCACCCAATCAGC+TGG | 0.444221 | 3_4:-77102093 | None:intergenic |
| GACAGAGCTGCAAACATAGA+AGG | 0.444672 | 3_4:+77101234 | Msa0523670:CDS |
| GTTATAACAAGTCGTCCAAC+TGG | 0.451498 | 3_4:-77103093 | None:intergenic |
| GTGTGACGAATTGTTTGTTT+GGG | 0.458908 | 3_4:-77097604 | None:intergenic |
| TGATGAAGCCGGTACGCCTA+TGG | 0.462210 | 3_4:+77098253 | Msa0523670:CDS |
| AGGCTCAGGTAGGGCGCGGA+GGG | 0.464479 | 3_4:+77100856 | Msa0523670:CDS |
| AAATAGTAGGGGAGGAAAGA+TGG | 0.465664 | 3_4:-77101601 | None:intergenic |
| CTGCACGTGCAATGCAAGGT+TGG | 0.470880 | 3_4:+77100885 | Msa0523670:CDS |
| GTTTCTCGCATATTCTCAAA+AGG | 0.473365 | 3_4:+77103506 | Msa0523670:three_prime_UTR |
| TACACAGAGCAAATGTGGAT+TGG | 0.474523 | 3_4:+77101634 | Msa0523670:CDS |
| GATTCAATGAAAACGAAGAA+TGG | 0.474859 | 3_4:-77097654 | None:intergenic |
| TTTCTACAGATCGAGGTCCT+TGG | 0.482284 | 3_4:+77098307 | Msa0523670:CDS |
| AAGTATATGCTCTAGTTCCT+GGG | 0.483026 | 3_4:+77102262 | Msa0523670:CDS |
| TGTACGCGTTCCTTTCGAGC+AGG | 0.485574 | 3_4:+77103448 | Msa0523670:CDS |
| CTCCAGGCTCAGGTAGGGCG+CGG | 0.493114 | 3_4:+77100852 | Msa0523670:CDS |
| ACATACTTGAGGCAATTCAA+TGG | 0.496631 | 3_4:-77098359 | None:intergenic |
| GAACCTCGCCGTATCCCATA+AGG | 0.497226 | 3_4:-77100919 | None:intergenic |
| ATAAAGGCTTCTCGCTCCAT+AGG | 0.502198 | 3_4:-77098269 | None:intergenic |
| AACGAATGATCCCGAGAAAG+AGG | 0.503733 | 3_4:+77097513 | None:intergenic |
| CAGGCTCAGGTAGGGCGCGG+AGG | 0.503793 | 3_4:+77100855 | Msa0523670:CDS |
| GAAGATCAATGTGCGGGAAA+CGG | 0.506451 | 3_4:+77102107 | Msa0523670:CDS |
| TTGTTCAAGTTGAGGAGTGA+GGG | 0.508455 | 3_4:-77098064 | None:intergenic |
| ACAGAGAACACCGTCTGGTA+TGG | 0.509878 | 3_4:+77101209 | Msa0523670:CDS |
| ACCGCTGTTTATCAGGCTCC+AGG | 0.511245 | 3_4:+77100836 | Msa0523670:CDS |
| AAAGCATAAGAGAGAGATTG+GGG | 0.512312 | 3_4:+77099818 | Msa0523670:CDS |
| AAGAGTGAGCCGTGGAGAGG+TGG | 0.512363 | 3_4:+77097539 | Msa0523670:five_prime_UTR |
| TATTGATTCACAAAATAGTA+GGG | 0.515006 | 3_4:-77101613 | None:intergenic |
| GAAGTCAATAATAACAATGC+TGG | 0.518567 | 3_4:+77098126 | Msa0523670:CDS |
| GGTTGATGGAGTGATCCGAC+AGG | 0.527898 | 3_4:-77099852 | None:intergenic |
| TCTGCTGTTGTTAGTTTGCA+TGG | 0.528508 | 3_4:+77103416 | Msa0523670:CDS |
| CATACTTGAGGCAATTCAAT+GGG | 0.529182 | 3_4:-77098358 | None:intergenic |
| TGATCTTCACCCAATCAGCT+GGG | 0.529764 | 3_4:-77102092 | None:intergenic |
| AGGAACTAGTCTAGCCCTGT+TGG | 0.531582 | 3_4:+77103567 | Msa0523670:three_prime_UTR |
| ACCTCTTCACGAAGGAGCCC+AGG | 0.532624 | 3_4:-77102279 | None:intergenic |
| CTGCAAACATAGAAGGAGAC+AGG | 0.533192 | 3_4:+77101241 | Msa0523670:CDS |
| TGTTGTTGTTGTTCAAGTTG+AGG | 0.536049 | 3_4:-77098072 | None:intergenic |
| CTTACTCAGACAGAAATCAA+TGG | 0.545998 | 3_4:+77097924 | Msa0523670:intron |
| TTCTCGCTCCATAGGCGTAC+CGG | 0.546405 | 3_4:-77098261 | None:intergenic |
| ATCAATACACAGAGCAAATG+TGG | 0.550737 | 3_4:+77101629 | Msa0523670:CDS |
| CACACAGCTCCCTGCTCGAA+AGG | 0.552889 | 3_4:-77103458 | None:intergenic |
| TCGAAGTTGTGGCGGTCAGT+AGG | 0.553786 | 3_4:+77099158 | Msa0523670:CDS |
| GTCGTCCAACTGGATCGGAT+TGG | 0.556323 | 3_4:-77103083 | None:intergenic |
| ATAACAAAGGATAAAGATAA+CGG | 0.556940 | 3_4:-77102315 | None:intergenic |
| GCGGCTGCACGTGCAATGCA+AGG | 0.557817 | 3_4:+77100881 | Msa0523670:CDS |
| ATCAATGATTTATTCTCTCT+AGG | 0.558415 | 3_4:+77103619 | Msa0523670:three_prime_UTR |
| GCTCAGCGCCTTATGGGATA+CGG | 0.558831 | 3_4:+77100911 | Msa0523670:CDS |
| GGACTTGCACTACAGTCTCA+TGG | 0.558888 | 3_4:+77099432 | Msa0523670:intron |
| AACAAACAGAGAACACCGTC+TGG | 0.560624 | 3_4:+77101204 | Msa0523670:CDS |
| AACAAGTCGTCCAACTGGAT+CGG | 0.560628 | 3_4:-77103088 | None:intergenic |
| TCCTGGGCTCCTTCGTGAAG+AGG | 0.564218 | 3_4:+77102278 | Msa0523670:CDS |
| GTACGCGTTCCTTTCGAGCA+GGG | 0.571183 | 3_4:+77103449 | Msa0523670:CDS |
| GATATGATATGATATGATAA+CGG | 0.572103 | 3_4:+77097692 | Msa0523670:five_prime_UTR |
| AATGGGACTTGATAAAACTT+GGG | 0.574691 | 3_4:-77098341 | None:intergenic |
| AATTATAGACAGTGAAAGCA+TGG | 0.578369 | 3_4:+77103537 | Msa0523670:three_prime_UTR |
| GTTGTTCAAGTTGAGGAGTG+AGG | 0.579571 | 3_4:-77098065 | None:intergenic |
| ATGCACTGGTGCAATATGCT+TGG | 0.579723 | 3_4:+77103654 | Msa0523670:three_prime_UTR |
| AGAAAATGCTGACAATCCAT+GGG | 0.582520 | 3_4:+77103125 | Msa0523670:CDS |
| AGTGAAAGCATGGTTATGCT+AGG | 0.584463 | 3_4:+77103547 | Msa0523670:three_prime_UTR |
| AGGTAACTGCATCGAAGTTG+TGG | 0.585142 | 3_4:+77099147 | Msa0523670:intron |
| TAGGTTGGTCACAGCAGTAG+TGG | 0.586143 | 3_4:+77102059 | Msa0523670:intron |
| TGGAGAGCTGTTATCAGACT+AGG | 0.587815 | 3_4:+77098665 | Msa0523670:CDS |
| TGGAGTGGATCAATTCTCGC+AGG | 0.587913 | 3_4:-77103389 | None:intergenic |
| TCAGGCTCCAGGCTCAGGTA+GGG | 0.588503 | 3_4:+77100847 | Msa0523670:CDS |
| ATATCTAGTCCTTACTTGGG+AGG | 0.589671 | 3_4:-77099194 | None:intergenic |
| CTTGGGAGGCTTGAATTCCA+AGG | 0.591311 | 3_4:-77098324 | None:intergenic |
| AAGAAGAGTGAGCCGTGGAG+AGG | 0.592568 | 3_4:+77097536 | Msa0523670:five_prime_UTR |
| AGAGGAAGAAGAGTGAGCCG+TGG | 0.593631 | 3_4:+77097531 | Msa0523670:five_prime_UTR |
| AACCTTAAGAGCAGTCTCCA+AGG | 0.593819 | 3_4:-77101569 | None:intergenic |
| TTGAAGGGAGTAATACCCCA+TGG | 0.594473 | 3_4:-77103141 | None:intergenic |
| CTAGTCCTTACTTGGGAGGG+TGG | 0.595303 | 3_4:-77099190 | None:intergenic |
| CAATAATAACAATGCTGGCG+AGG | 0.595839 | 3_4:+77098131 | Msa0523670:CDS |
| GGTAAAATACCCAAATGCAC+TGG | 0.598603 | 3_4:+77103640 | Msa0523670:three_prime_UTR |
| ATCAGGCTCCAGGCTCAGGT+AGG | 0.598841 | 3_4:+77100846 | Msa0523670:CDS |
| ATGGCTGCTTATGATGAAGC+CGG | 0.600910 | 3_4:+77098242 | Msa0523670:CDS |
| GATTCACAAAATAGTAGGGG+AGG | 0.603712 | 3_4:-77101609 | None:intergenic |
| TATCTAGTCCTTACTTGGGA+GGG | 0.608180 | 3_4:-77099193 | None:intergenic |
| ACTCCATCAACCATCGAGTG+TGG | 0.608784 | 3_4:+77099863 | Msa0523670:CDS |
| GTCACAGCAGTAGTGGACAT+TGG | 0.609262 | 3_4:+77102066 | Msa0523670:CDS |
| ATTCTCTCGCATTCTCAACA+AGG | 0.614488 | 3_4:+77097772 | Msa0523670:five_prime_UTR |
| CAGACCTTAACAGCTGACTC+AGG | 0.614584 | 3_4:-77100941 | None:intergenic |
| GGGACTTGATAAAACTTGGG+AGG | 0.626061 | 3_4:-77098338 | None:intergenic |
| GATCTTCACCCAATCAGCTG+GGG | 0.626273 | 3_4:-77102091 | None:intergenic |
| CTCAGACAGAAATCAATGGA+GGG | 0.633845 | 3_4:+77097928 | Msa0523670:intron |
| TCAGCAGCTCCACCTCTCCA+CGG | 0.636350 | 3_4:-77097548 | None:intergenic |
| CAGACTAGGTGGCTATGAAG+TGG | 0.636788 | 3_4:+77098679 | Msa0523670:CDS |
| CGGGTCCAATCCGATCCAGT+TGG | 0.638558 | 3_4:+77103078 | Msa0523670:CDS |
| ACTCAGACAGAAATCAATGG+AGG | 0.640060 | 3_4:+77097927 | Msa0523670:intron |
| CACAGAGCAAATGTGGATTG+GGG | 0.640717 | 3_4:+77101636 | Msa0523670:CDS |
| TTGGGTGAAGATCAATGTGC+GGG | 0.643862 | 3_4:+77102101 | Msa0523670:CDS |
| GGGGAGTTACAGCTCCCTGT+CGG | 0.649300 | 3_4:+77099837 | Msa0523670:CDS |
| ATCTTCACCCAATCAGCTGG+GGG | 0.651763 | 3_4:-77102090 | None:intergenic |
| TCGAGCATTTCTACAGATCG+AGG | 0.659811 | 3_4:+77098300 | Msa0523670:CDS |
| ACAACAGCAGATGTTTGGAG+TGG | 0.672692 | 3_4:-77103404 | None:intergenic |
| TAAAGATAACGGAACTACAG+AGG | 0.675556 | 3_4:-77102304 | None:intergenic |
| GCGCCTTATGGGATACGGCG+AGG | 0.677937 | 3_4:+77100916 | Msa0523670:CDS |
| ATTGATTCACAAAATAGTAG+GGG | 0.678661 | 3_4:-77101612 | None:intergenic |
| GTTGATGGAGTGATCCGACA+GGG | 0.680833 | 3_4:-77099851 | None:intergenic |
| TAACTGCATCGAAGTTGTGG+CGG | 0.684336 | 3_4:+77099150 | Msa0523670:CDS |
| GCTCTGTCATCCATACCAGA+CGG | 0.693775 | 3_4:-77101219 | None:intergenic |
| GCCTGGAGCCTGATAAACAG+CGG | 0.707020 | 3_4:-77100837 | None:intergenic |
| ATTGGGTGAAGATCAATGTG+CGG | 0.707083 | 3_4:+77102100 | Msa0523670:CDS |
| AGAGCTGTTATCAGACTAGG+TGG | 0.717567 | 3_4:+77098668 | Msa0523670:CDS |
| CAGAGGTTACCTCTTCACGA+AGG | 0.753208 | 3_4:-77102287 | None:intergenic |
| GAAAATGCTGACAATCCATG+GGG | 0.772709 | 3_4:+77103126 | Msa0523670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTATTATTAAAATGAAAA+TGG | - | chr3_4:77099075-77099094 | None:intergenic | 10.0% |
| !!! | TAATTCTTTATTTTATTTTG+CGG | - | chr3_4:77101485-77101504 | None:intergenic | 10.0% |
| !! | AAATTATTGCAATATATTAT+AGG | + | chr3_4:77102615-77102634 | Msa0523670:intron | 10.0% |
| !! | TAAAAATGTATTCAAAAGAA+TGG | - | chr3_4:77098203-77098222 | None:intergenic | 15.0% |
| !!! | TTTTATATAATACATACTTG+AGG | - | chr3_4:77098373-77098392 | None:intergenic | 15.0% |
| !!! | CATTTGTTATTAAATATTAG+AGG | + | chr3_4:77100412-77100431 | Msa0523670:intron | 15.0% |
| !! | GTAAAACTTACTTAATATTA+AGG | + | chr3_4:77102348-77102367 | Msa0523670:intron | 15.0% |
| !! | TGAAAATAGTAAATATATCA+AGG | - | chr3_4:77103197-77103216 | None:intergenic | 15.0% |
| !!! | ATATATTTACTATTTTCATC+TGG | + | chr3_4:77103199-77103218 | Msa0523670:intron | 15.0% |
| !! | AACAATATTAAATATTAGCT+TGG | + | chr3_4:77103304-77103323 | Msa0523670:intron | 15.0% |
| !! | GATATGATATGATATGATAA+CGG | + | chr3_4:77097692-77097711 | Msa0523670:five_prime_UTR | 20.0% |
| !! | CTATAAAATGCAAAAAACTA+CGG | - | chr3_4:77098759-77098778 | None:intergenic | 20.0% |
| !!! | TCATTATATTCTAGTTTGTT+TGG | + | chr3_4:77098979-77098998 | Msa0523670:intron | 20.0% |
| !!! | ATTTAGTTCTCTTATGTTTT+TGG | + | chr3_4:77099049-77099068 | Msa0523670:intron | 20.0% |
| !!! | TCAGTTATTTATTTTTGAAC+AGG | - | chr3_4:77099106-77099125 | None:intergenic | 20.0% |
| !!! | ATAACAAGTTTTTCATTTCT+AGG | - | chr3_4:77100498-77100517 | None:intergenic | 20.0% |
| !! | GAAAAGAACCTAAAAAATAT+CGG | + | chr3_4:77101097-77101116 | Msa0523670:CDS | 20.0% |
| !!! | TATTGATTCACAAAATAGTA+GGG | - | chr3_4:77101616-77101635 | None:intergenic | 20.0% |
| !! | AGGAATTATTAATGGTTAAA+TGG | - | chr3_4:77101722-77101741 | None:intergenic | 20.0% |
| !!! | TTTCAAGTAGGAATTATTAA+TGG | - | chr3_4:77101730-77101749 | None:intergenic | 20.0% |
| !!! | AATTATTTCAGATTTCAAGT+AGG | - | chr3_4:77101742-77101761 | None:intergenic | 20.0% |
| !! | ATAACAAAGGATAAAGATAA+CGG | - | chr3_4:77102318-77102337 | None:intergenic | 20.0% |
| !!! | ATTTTTGATTCAATAGAACT+AGG | - | chr3_4:77102376-77102395 | None:intergenic | 20.0% |
| !! | CTATTGAATCAAAAATATGT+CGG | + | chr3_4:77102380-77102399 | Msa0523670:intron | 20.0% |
| !!! | AAAACCGACATTTTTTTTTT+GGG | - | chr3_4:77102537-77102556 | None:intergenic | 20.0% |
| !!! | ATTTTTAGGTAATTAAGACT+CGG | - | chr3_4:77102565-77102584 | None:intergenic | 20.0% |
| !!! | TTTTATTACCAGTGATTTTT+AGG | - | chr3_4:77102579-77102598 | None:intergenic | 20.0% |
| !!! | ATCCAAAAAAAATCTTTTCA+GGG | + | chr3_4:77102859-77102878 | Msa0523670:intron | 20.0% |
| ! | AAAACGAAGAATGGATAATT+GGG | - | chr3_4:77097648-77097667 | None:intergenic | 25.0% |
| ! | TTGTTATCTTATTATGCAGA+TGG | + | chr3_4:77098223-77098242 | Msa0523670:intron | 25.0% |
| ! | ACTGTAACAAACAATTTGAA+GGG | - | chr3_4:77098397-77098416 | None:intergenic | 25.0% |
| ! | TACTGTAACAAACAATTTGA+AGG | - | chr3_4:77098398-77098417 | None:intergenic | 25.0% |
| ! | GCTAAATGCTGAATATATAA+GGG | + | chr3_4:77098451-77098470 | Msa0523670:intron | 25.0% |
| ! | TTCAAAACTAGTATACGTTA+CGG | - | chr3_4:77098579-77098598 | None:intergenic | 25.0% |
| !! | TCATTTAGTGCTATATGTTT+TGG | + | chr3_4:77099019-77099038 | Msa0523670:intron | 25.0% |
| !! | CATTTAGTGCTATATGTTTT+GGG | + | chr3_4:77099020-77099039 | Msa0523670:intron | 25.0% |
| ! | AATATTCACCGAATATATGT+AGG | + | chr3_4:77099127-77099146 | Msa0523670:intron | 25.0% |
| ! | AATATATCTAGTCCTTACTT+GGG | - | chr3_4:77099200-77099219 | None:intergenic | 25.0% |
| ! | TAATATATCTAGTCCTTACT+TGG | - | chr3_4:77099201-77099220 | None:intergenic | 25.0% |
| !!! | GTTTAGAATCTTTTATGAGA+AGG | + | chr3_4:77099457-77099476 | Msa0523670:CDS | 25.0% |
| ! | CATGTAATAACAGAAAATCT+TGG | - | chr3_4:77099666-77099685 | None:intergenic | 25.0% |
| ! | ATCTATCTATCTATCTATCA+AGG | - | chr3_4:77100259-77100278 | None:intergenic | 25.0% |
| !!! | AAACTTATGAGCCATTTTTT+GGG | - | chr3_4:77100362-77100381 | None:intergenic | 25.0% |
| !!! | AAAACTTATGAGCCATTTTT+TGG | - | chr3_4:77100363-77100382 | None:intergenic | 25.0% |
| !!! | ATACTGACTTTAAGAAACAA+AGG | + | chr3_4:77100624-77100643 | Msa0523670:intron | 25.0% |
| ! | ACAACAAATGACAATAAGAA+GGG | - | chr3_4:77100990-77101009 | None:intergenic | 25.0% |
| !!! | CATTTGTTGTGTTTATACAT+TGG | + | chr3_4:77101000-77101019 | Msa0523670:intron | 25.0% |
| ! | TTATGATGCAAGTAAGTTAT+AGG | - | chr3_4:77101151-77101170 | None:intergenic | 25.0% |
| ! | ATTTATATCTGTTTCACTGT+TGG | + | chr3_4:77101307-77101326 | Msa0523670:intron | 25.0% |
| ! | GTGAAATAAAAGATAGTAGA+TGG | - | chr3_4:77101338-77101357 | None:intergenic | 25.0% |
| !!! | ACGAAACTTGTTATAATGAA+GGG | - | chr3_4:77101383-77101402 | None:intergenic | 25.0% |
| !!! | AACGAAACTTGTTATAATGA+AGG | - | chr3_4:77101384-77101403 | None:intergenic | 25.0% |
| !! | ATTGATTCACAAAATAGTAG+GGG | - | chr3_4:77101615-77101634 | None:intergenic | 25.0% |
| !!! | GTATTGATTCACAAAATAGT+AGG | - | chr3_4:77101617-77101636 | None:intergenic | 25.0% |
| !!! | ATTAATGGTTAAATGGATTG+TGG | - | chr3_4:77101715-77101734 | None:intergenic | 25.0% |
| !! | TGAAATCTGAAATAATTGAG+AGG | + | chr3_4:77101745-77101764 | Msa0523670:intron | 25.0% |
| ! | TTAATGATGCACTTTGAATT+TGG | - | chr3_4:77101988-77102007 | None:intergenic | 25.0% |
| ! | AGATGAAAATCATTTAGCTA+TGG | - | chr3_4:77102037-77102056 | None:intergenic | 25.0% |
| !! | ATAGCTAAATGATTTTCATC+TGG | + | chr3_4:77102036-77102055 | Msa0523670:intron | 25.0% |
| ! | TACATTAAAGGACATGAATT+GGG | - | chr3_4:77102158-77102177 | None:intergenic | 25.0% |
| ! | ATACATTAAAGGACATGAAT+TGG | - | chr3_4:77102159-77102178 | None:intergenic | 25.0% |
| ! | CTGCAATTATGATACATTAA+AGG | - | chr3_4:77102170-77102189 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTTTGGGGTATGT+AGG | - | chr3_4:77102528-77102547 | None:intergenic | 25.0% |
| ! | ATACCCCAAAAAAAAAATGT+CGG | + | chr3_4:77102530-77102549 | Msa0523670:intron | 25.0% |
| !!! | AAACCGACATTTTTTTTTTG+GGG | - | chr3_4:77102536-77102555 | None:intergenic | 25.0% |
| !!! | GAAAACCGACATTTTTTTTT+TGG | - | chr3_4:77102538-77102557 | None:intergenic | 25.0% |
| ! | CTTAATTACCTAAAAATCAC+TGG | + | chr3_4:77102568-77102587 | Msa0523670:intron | 25.0% |
| ! | ATCACTGGTAATAAAAAACT+TGG | + | chr3_4:77102583-77102602 | Msa0523670:intron | 25.0% |
| !! | GATCCAAAAAAAATCTTTTC+AGG | + | chr3_4:77102858-77102877 | Msa0523670:intron | 25.0% |
| !! | TCCAAAAAAAATCTTTTCAG+GGG | + | chr3_4:77102860-77102879 | Msa0523670:intron | 25.0% |
| ! | CATAATCGCTCAATTATTTA+AGG | + | chr3_4:77102931-77102950 | Msa0523670:intron | 25.0% |
| ! | ATAAAAACATAAACCAAGGA+AGG | - | chr3_4:77103032-77103051 | None:intergenic | 25.0% |
| ! | CGTAATAAAAACATAAACCA+AGG | - | chr3_4:77103036-77103055 | None:intergenic | 25.0% |
| !!! | TAGTTTTAACTAAACCAACA+GGG | - | chr3_4:77103584-77103603 | None:intergenic | 25.0% |
| !!! | ATAGTTTTAACTAAACCAAC+AGG | - | chr3_4:77103585-77103604 | None:intergenic | 25.0% |
| ! | ATCAATGATTTATTCTCTCT+AGG | + | chr3_4:77103619-77103638 | Msa0523670:three_prime_UTR | 25.0% |
| GAAAACGAAGAATGGATAAT+TGG | - | chr3_4:77097649-77097668 | None:intergenic | 30.0% | |
| GATTCAATGAAAACGAAGAA+TGG | - | chr3_4:77097657-77097676 | None:intergenic | 30.0% | |
| !! | AGTAAGTAGGGTTTTGTAAA+GGG | - | chr3_4:77097910-77097929 | None:intergenic | 30.0% |
| !! | ACGTTCTTAACTTTAGGTTT+TGG | - | chr3_4:77098102-77098121 | None:intergenic | 30.0% |
| TCTGTAACGTTCTTAACTTT+AGG | - | chr3_4:77098108-77098127 | None:intergenic | 30.0% | |
| GAAGTCAATAATAACAATGC+TGG | + | chr3_4:77098126-77098145 | Msa0523670:CDS | 30.0% | |
| AATGGGACTTGATAAAACTT+GGG | - | chr3_4:77098344-77098363 | None:intergenic | 30.0% | |
| TGAAAATACTTGCGAGAAAA+AGG | - | chr3_4:77098424-77098443 | None:intergenic | 30.0% | |
| ! | TTCTCGCAAGTATTTTCAAA+TGG | + | chr3_4:77098426-77098445 | Msa0523670:intron | 30.0% |
| GGCTAAATGCTGAATATATA+AGG | + | chr3_4:77098450-77098469 | Msa0523670:intron | 30.0% | |
| AAATGCTGAATATATAAGGG+AGG | + | chr3_4:77098454-77098473 | Msa0523670:intron | 30.0% | |
| ATGAGCAATAATGAAGCAAA+TGG | - | chr3_4:77098712-77098731 | None:intergenic | 30.0% | |
| TGCAGTTACCTACATATATT+CGG | - | chr3_4:77099138-77099157 | None:intergenic | 30.0% | |
| GTAAGATAATGAACAGCAAA+GGG | - | chr3_4:77099392-77099411 | None:intergenic | 30.0% | |
| AGTAAGATAATGAACAGCAA+AGG | - | chr3_4:77099393-77099412 | None:intergenic | 30.0% | |
| TGAAAAATCTCAATTTGTGC+AGG | + | chr3_4:77099779-77099798 | Msa0523670:intron | 30.0% | |
| ! | AAAAGCATAAGAGAGAGATT+GGG | + | chr3_4:77099817-77099836 | Msa0523670:CDS | 30.0% |
| ATGAAATCATATAACCAGAG+GGG | - | chr3_4:77099918-77099937 | None:intergenic | 30.0% | |
| CATGAAATCATATAACCAGA+GGG | - | chr3_4:77099919-77099938 | None:intergenic | 30.0% | |
| ACATGAAATCATATAACCAG+AGG | - | chr3_4:77099920-77099939 | None:intergenic | 30.0% | |
| ATGATTTCATGTCTACGTAT+AGG | + | chr3_4:77099928-77099947 | Msa0523670:intron | 30.0% | |
| GTTATACTCATATCTTGCAT+TGG | + | chr3_4:77100011-77100030 | Msa0523670:intron | 30.0% | |
| GAAAAGATAAGGAACTGAAT+GGG | + | chr3_4:77100192-77100211 | Msa0523670:intron | 30.0% | |
| !! | ATGGGTTTTTGTTTATGATC+AGG | + | chr3_4:77100210-77100229 | Msa0523670:intron | 30.0% |
| !! | TGGGTTTTTGTTTATGATCA+GGG | + | chr3_4:77100211-77100230 | Msa0523670:intron | 30.0% |
| ! | TTTCATTTCTAGGTATTCGT+TGG | - | chr3_4:77100488-77100507 | None:intergenic | 30.0% |
| !! | GTTTCTTTGAAACTGACAAT+TGG | + | chr3_4:77100533-77100552 | Msa0523670:intron | 30.0% |
| ! | GACTTTAAGAAACAAAGGAA+AGG | + | chr3_4:77100629-77100648 | Msa0523670:intron | 30.0% |
| CAACAAATGACAATAAGAAG+GGG | - | chr3_4:77100989-77101008 | None:intergenic | 30.0% | |
| CACAACAAATGACAATAAGA+AGG | - | chr3_4:77100991-77101010 | None:intergenic | 30.0% | |
| !! | TTTAGGTTCTTTTCACGTTT+TGG | - | chr3_4:77101091-77101110 | None:intergenic | 30.0% |
| !!! | TGAGCATACCGATATTTTTT+AGG | - | chr3_4:77101108-77101127 | None:intergenic | 30.0% |
| AGTTATAGGATAGTCAATGT+TGG | - | chr3_4:77101137-77101156 | None:intergenic | 30.0% | |
| GTCTCATATTGGATAAGATA+AGG | + | chr3_4:77101780-77101799 | Msa0523670:intron | 30.0% | |
| CTACAAAATCAGCTTATAGA+GGG | - | chr3_4:77101873-77101892 | None:intergenic | 30.0% | |
| !! | CTCTATAAGCTGATTTTGTA+GGG | + | chr3_4:77101872-77101891 | Msa0523670:intron | 30.0% |
| ! | CTAAATGATTTTCATCTGGT+AGG | + | chr3_4:77102040-77102059 | Msa0523670:intron | 30.0% |
| ATACTTCAAAACAATCCTTC+TGG | - | chr3_4:77102248-77102267 | None:intergenic | 30.0% | |
| !!! | ATCCTTTGTTATTTTTGTGC+TGG | + | chr3_4:77102326-77102345 | Msa0523670:CDS | 30.0% |
| TACCAGCACAAAAATAACAA+AGG | - | chr3_4:77102331-77102350 | None:intergenic | 30.0% | |
| TAAGCTTAGATGTATAACGT+AGG | + | chr3_4:77102648-77102667 | Msa0523670:intron | 30.0% | |
| TTCCAACACATACAAAACTA+TGG | - | chr3_4:77102767-77102786 | None:intergenic | 30.0% | |
| TGGATCATGAAATACAAGTA+GGG | - | chr3_4:77102844-77102863 | None:intergenic | 30.0% | |
| TTGGATCATGAAATACAAGT+AGG | - | chr3_4:77102845-77102864 | None:intergenic | 30.0% | |
| !!! | ACCCCTGAAAAGATTTTTTT+TGG | - | chr3_4:77102864-77102883 | None:intergenic | 30.0% |
| ATCGCTCAATTATTTAAGGA+TGG | + | chr3_4:77102935-77102954 | Msa0523670:intron | 30.0% | |
| ! | TGTTTTCACTTGCTTAGTTT+TGG | + | chr3_4:77102959-77102978 | Msa0523670:intron | 30.0% |
| CAAGGAAGGAAAAATCATAA+AGG | - | chr3_4:77103018-77103037 | None:intergenic | 30.0% | |
| ! | CTTTATGATTTTTCCTTCCT+TGG | + | chr3_4:77103016-77103035 | Msa0523670:intron | 30.0% |
| ! | GATAGAGTTACCTTTTTGAA+GGG | - | chr3_4:77103159-77103178 | None:intergenic | 30.0% |
| ! | AGATAGAGTTACCTTTTTGA+AGG | - | chr3_4:77103160-77103179 | None:intergenic | 30.0% |
| !! | TTGGCTTGTGATTTGAAAAT+GGG | + | chr3_4:77103323-77103342 | Msa0523670:intron | 30.0% |
| AATGGGTAAATGAAATTAGC+TGG | + | chr3_4:77103340-77103359 | Msa0523670:intron | 30.0% | |
| !!! | TTAGCTGGTTTTTTTTTTCC+AGG | + | chr3_4:77103355-77103374 | Msa0523670:intron | 30.0% |
| AATTATAGACAGTGAAAGCA+TGG | + | chr3_4:77103537-77103556 | Msa0523670:three_prime_UTR | 30.0% | |
| !! | TGAGTGCTGATACTCAAAAA+CGG | + | chr3_4:77097568-77097587 | Msa0523670:five_prime_UTR | 35.0% |
| GTGTGACGAATTGTTTGTTT+GGG | - | chr3_4:77097607-77097626 | None:intergenic | 35.0% | |
| TGTGTGACGAATTGTTTGTT+TGG | - | chr3_4:77097608-77097627 | None:intergenic | 35.0% | |
| !! | GAGTAAGTAGGGTTTTGTAA+AGG | - | chr3_4:77097911-77097930 | None:intergenic | 35.0% |
| GATTTCTGTCTGAGTAAGTA+GGG | - | chr3_4:77097922-77097941 | None:intergenic | 35.0% | |
| TGATTTCTGTCTGAGTAAGT+AGG | - | chr3_4:77097923-77097942 | None:intergenic | 35.0% | |
| CTTACTCAGACAGAAATCAA+TGG | + | chr3_4:77097924-77097943 | Msa0523670:intron | 35.0% | |
| !! | TGTTGTTGTTGTTCAAGTTG+AGG | - | chr3_4:77098075-77098094 | None:intergenic | 35.0% |
| CAATGGGACTTGATAAAACT+TGG | - | chr3_4:77098345-77098364 | None:intergenic | 35.0% | |
| CATACTTGAGGCAATTCAAT+GGG | - | chr3_4:77098361-77098380 | None:intergenic | 35.0% | |
| ACATACTTGAGGCAATTCAA+TGG | - | chr3_4:77098362-77098381 | None:intergenic | 35.0% | |
| ! | TCGCAAGTATTTTCAAATGG+CGG | + | chr3_4:77098429-77098448 | Msa0523670:intron | 35.0% |
| TAACTGTTCTGATCTGATAG+CGG | + | chr3_4:77098612-77098631 | Msa0523670:intron | 35.0% | |
| ATGCAAAAAACTACGGTGAT+GGG | - | chr3_4:77098752-77098771 | None:intergenic | 35.0% | |
| AATGCAAAAAACTACGGTGA+TGG | - | chr3_4:77098753-77098772 | None:intergenic | 35.0% | |
| !! | ATATAACTTTAGGGCAACAC+AGG | - | chr3_4:77098881-77098900 | None:intergenic | 35.0% |
| GTGCTCATAACTAGTTGTTA+TGG | + | chr3_4:77099305-77099324 | Msa0523670:intron | 35.0% | |
| AGTCACACTTGAAATAGTAC+AGG | - | chr3_4:77099698-77099717 | None:intergenic | 35.0% | |
| ! | TTTTCAGACATCAGACACAA+AGG | - | chr3_4:77099765-77099784 | None:intergenic | 35.0% |
| ! | GAAAAGCATAAGAGAGAGAT+TGG | + | chr3_4:77099816-77099835 | Msa0523670:CDS | 35.0% |
| AAAGCATAAGAGAGAGATTG+GGG | + | chr3_4:77099818-77099837 | Msa0523670:CDS | 35.0% | |
| TGAAATCATATAACCAGAGG+GGG | - | chr3_4:77099917-77099936 | None:intergenic | 35.0% | |
| ! | TATTTTCCTTTGTCGTGGAA+TGG | + | chr3_4:77099975-77099994 | Msa0523670:intron | 35.0% |
| ! | ATTTTCCTTTGTCGTGGAAT+GGG | + | chr3_4:77099976-77099995 | Msa0523670:intron | 35.0% |
| GCAAAAACTCTTCACATTAC+TGG | + | chr3_4:77100055-77100074 | Msa0523670:intron | 35.0% | |
| TTCTTTAGCACACAGTTAAG+CGG | + | chr3_4:77100170-77100189 | Msa0523670:intron | 35.0% | |
| ACAGTTAAGCGGAAAAGATA+AGG | + | chr3_4:77100181-77100200 | Msa0523670:intron | 35.0% | |
| GGAAAAGATAAGGAACTGAA+TGG | + | chr3_4:77100191-77100210 | Msa0523670:intron | 35.0% | |
| AGAAACAGAAGCCCAAAAAA+TGG | + | chr3_4:77100348-77100367 | Msa0523670:intron | 35.0% | |
| TGAACTTTCATGTGTACTAG+AGG | + | chr3_4:77100444-77100463 | Msa0523670:intron | 35.0% | |
| GAACTTTCATGTGTACTAGA+GGG | + | chr3_4:77100445-77100464 | Msa0523670:intron | 35.0% | |
| CTGTGCAAGAAAATACAAAG+AGG | - | chr3_4:77101047-77101066 | None:intergenic | 35.0% | |
| ! | CTCTTTGTATTTTCTTGCAC+AGG | + | chr3_4:77101045-77101064 | Msa0523670:intron | 35.0% |
| !! | TTCTTTTCACGTTTTGGTGT+GGG | - | chr3_4:77101085-77101104 | None:intergenic | 35.0% |
| CTTCGTTGCTTCAATGAATT+AGG | + | chr3_4:77101174-77101193 | Msa0523670:intron | 35.0% | |
| ATAATGAAGGGAACTCACAT+GGG | - | chr3_4:77101371-77101390 | None:intergenic | 35.0% | |
| TATAATGAAGGGAACTCACA+TGG | - | chr3_4:77101372-77101391 | None:intergenic | 35.0% | |
| ACCTGAATAACATATGGACA+GGG | - | chr3_4:77101549-77101568 | None:intergenic | 35.0% | |
| ATCAATACACAGAGCAAATG+TGG | + | chr3_4:77101629-77101648 | Msa0523670:CDS | 35.0% | |
| ! | TATTTTGCATGATGTCAGTG+TGG | + | chr3_4:77101668-77101687 | Msa0523670:intron | 35.0% |
| ! | TGTGGTGTCAGTAATATAGA+TGG | - | chr3_4:77101697-77101716 | None:intergenic | 35.0% |
| AGCTGTTAAGAGTCTCATAT+TGG | + | chr3_4:77101769-77101788 | Msa0523670:intron | 35.0% | |
| TTGAAAATGCGTTTACAGGT+AGG | + | chr3_4:77101804-77101823 | Msa0523670:intron | 35.0% | |
| ACAAAACCGGATTATAGAGA+GGG | - | chr3_4:77101836-77101855 | None:intergenic | 35.0% | |
| TACAAAACCGGATTATAGAG+AGG | - | chr3_4:77101837-77101856 | None:intergenic | 35.0% | |
| !! | TCTCTATAATCCGGTTTTGT+AGG | + | chr3_4:77101836-77101855 | Msa0523670:intron | 35.0% |
| CTAACTCATACCTACAAAAC+CGG | - | chr3_4:77101849-77101868 | None:intergenic | 35.0% | |
| CCTACAAAATCAGCTTATAG+AGG | - | chr3_4:77101874-77101893 | None:intergenic | 35.0% | |
| !! | CCTCTATAAGCTGATTTTGT+AGG | + | chr3_4:77101871-77101890 | Msa0523670:intron | 35.0% |
| !! | ATAAGCTGATTTTGTAGGGA+TGG | + | chr3_4:77101876-77101895 | Msa0523670:intron | 35.0% |
| !! | TAAGCTGATTTTGTAGGGAT+GGG | + | chr3_4:77101877-77101896 | Msa0523670:intron | 35.0% |
| AAAGTCTATCCAAGATGCTT+TGG | + | chr3_4:77101930-77101949 | Msa0523670:intron | 35.0% | |
| AAGTCTATCCAAGATGCTTT+GGG | + | chr3_4:77101931-77101950 | Msa0523670:intron | 35.0% | |
| TGATGCACTTTGAATTTGGA+GGG | - | chr3_4:77101984-77102003 | None:intergenic | 35.0% | |
| ATGATGCACTTTGAATTTGG+AGG | - | chr3_4:77101985-77102004 | None:intergenic | 35.0% | |
| ! | ATGATTTTCATCTGGTAGGT+TGG | + | chr3_4:77102044-77102063 | Msa0523670:intron | 35.0% |
| ! | AAGTATATGCTCTAGTTCCT+GGG | + | chr3_4:77102262-77102281 | Msa0523670:CDS | 35.0% |
| !! | TAAAGATAACGGAACTACAG+AGG | - | chr3_4:77102307-77102326 | None:intergenic | 35.0% |
| GTTGTCCAACCTAGTAATTT+CGG | - | chr3_4:77102438-77102457 | None:intergenic | 35.0% | |
| !! | CACTTTTTACTGAGCTGTTT+TGG | + | chr3_4:77102708-77102727 | Msa0523670:intron | 35.0% |
| CAACACATACAAAACTATGG+TGG | - | chr3_4:77102764-77102783 | None:intergenic | 35.0% | |
| !!! | CACCATAGTTTTGTATGTGT+TGG | + | chr3_4:77102762-77102781 | Msa0523670:intron | 35.0% |
| TTAACATGACAATGCCATCA+AGG | - | chr3_4:77102812-77102831 | None:intergenic | 35.0% | |
| !! | TTCTCTAAAGTGAACAAGAG+TGG | + | chr3_4:77102885-77102904 | Msa0523670:intron | 35.0% |
| TTGAGCGATTATGAACACAA+TGG | - | chr3_4:77102924-77102943 | None:intergenic | 35.0% | |
| ACGATTGATTGAATGAATCC+AGG | + | chr3_4:77103053-77103072 | Msa0523670:intron | 35.0% | |
| TGATTGAATGAATCCAGGTA+CGG | + | chr3_4:77103058-77103077 | Msa0523670:intron | 35.0% | |
| AGAAAATGCTGACAATCCAT+GGG | + | chr3_4:77103125-77103144 | Msa0523670:CDS | 35.0% | |
| !! | CTTGGCTTGTGATTTGAAAA+TGG | + | chr3_4:77103322-77103341 | Msa0523670:intron | 35.0% |
| AACTAACAACAGCAGATGTT+TGG | - | chr3_4:77103412-77103431 | None:intergenic | 35.0% | |
| GTTTCTCGCATATTCTCAAA+AGG | + | chr3_4:77103506-77103525 | Msa0523670:three_prime_UTR | 35.0% | |
| ATTCTCTCGCATTCTCAACA+AGG | + | chr3_4:77097772-77097791 | Msa0523670:five_prime_UTR | 40.0% | |
| ATGAGAAAGAGAAACGACGA+CGG | - | chr3_4:77097810-77097829 | None:intergenic | 40.0% | |
| ACTCAGACAGAAATCAATGG+AGG | + | chr3_4:77097927-77097946 | Msa0523670:intron | 40.0% | |
| CTCAGACAGAAATCAATGGA+GGG | + | chr3_4:77097928-77097947 | Msa0523670:intron | 40.0% | |
| ATCAATGGAGGGTCATGAAA+TGG | + | chr3_4:77097939-77097958 | Msa0523670:exon | 40.0% | |
| !! | TTGTTCAAGTTGAGGAGTGA+GGG | - | chr3_4:77098067-77098086 | None:intergenic | 40.0% |
| CAATAATAACAATGCTGGCG+AGG | + | chr3_4:77098131-77098150 | Msa0523670:CDS | 40.0% | |
| ATGCTCGAGCTCTTTCATAA+AGG | - | chr3_4:77098288-77098307 | None:intergenic | 40.0% | |
| CCTTACGGCATTAGGTATAT+GGG | - | chr3_4:77098488-77098507 | None:intergenic | 40.0% | |
| ACCTTACGGCATTAGGTATA+TGG | - | chr3_4:77098489-77098508 | None:intergenic | 40.0% | |
| ! | ACCTAATGCCGTAAGGTTTT+AGG | + | chr3_4:77098492-77098511 | Msa0523670:intron | 40.0% |
| ACCTAAAACCTTACGGCATT+AGG | - | chr3_4:77098496-77098515 | None:intergenic | 40.0% | |
| !!! | TAATGCCGTAAGGTTTTAGG+TGG | + | chr3_4:77098495-77098514 | Msa0523670:intron | 40.0% |
| CATCTCCACCTAAAACCTTA+CGG | - | chr3_4:77098503-77098522 | None:intergenic | 40.0% | |
| !!! | TAAGGTTTTAGGTGGAGATG+TGG | + | chr3_4:77098503-77098522 | Msa0523670:intron | 40.0% |
| !!! | AAGGTTTTAGGTGGAGATGT+GGG | + | chr3_4:77098504-77098523 | Msa0523670:intron | 40.0% |
| ATACTTCAGAACCACAAGAG+AGG | - | chr3_4:77098539-77098558 | None:intergenic | 40.0% | |
| TACGTTACGGAGAGCAATAA+CGG | - | chr3_4:77098566-77098585 | None:intergenic | 40.0% | |
| !! | CGGACTGCTTATTTTCTCAT+CGG | + | chr3_4:77098632-77098651 | Msa0523670:intron | 40.0% |
| CATTTCCCAATAAGAACGCA+TGG | + | chr3_4:77098804-77098823 | Msa0523670:intron | 40.0% | |
| ! | CAAGTCTTATCACGCTAGAT+GGG | - | chr3_4:77098937-77098956 | None:intergenic | 40.0% |
| TATCTAGTCCTTACTTGGGA+GGG | - | chr3_4:77099196-77099215 | None:intergenic | 40.0% | |
| ATATCTAGTCCTTACTTGGG+AGG | - | chr3_4:77099197-77099216 | None:intergenic | 40.0% | |
| CTGAATACATTCTCTACCAC+AGG | + | chr3_4:77099411-77099430 | Msa0523670:intron | 40.0% | |
| GAGACAATGTGCATCAGTTT+CGG | + | chr3_4:77099544-77099563 | Msa0523670:intron | 40.0% | |
| ! | CATCAGTTTCGGTGTGAATT+TGG | + | chr3_4:77099555-77099574 | Msa0523670:intron | 40.0% |
| AATCCAGAAGTTCTGTCACA+AGG | - | chr3_4:77099628-77099647 | None:intergenic | 40.0% | |
| CACAAAGGAAACAGAAGATC+AGG | - | chr3_4:77099750-77099769 | None:intergenic | 40.0% | |
| GAAATCATATAACCAGAGGG+GGG | - | chr3_4:77099916-77099935 | None:intergenic | 40.0% | |
| ! | TCCTCTATTTTCCTTTGTCG+TGG | + | chr3_4:77099970-77099989 | Msa0523670:intron | 40.0% |
| TCCACGACAAAGGAAAATAG+AGG | - | chr3_4:77099974-77099993 | None:intergenic | 40.0% | |
| ! | GTGGAATGGGTTTGATTCTT+CGG | + | chr3_4:77099989-77100008 | Msa0523670:intron | 40.0% |
| TGCATTGGAAACAGAAGTTG+AGG | + | chr3_4:77100026-77100045 | Msa0523670:intron | 40.0% | |
| CGTTGGCGATTGTAAAATGT+AGG | - | chr3_4:77100471-77100490 | None:intergenic | 40.0% | |
| ATTGGCAACAACATCCAAGT+TGG | + | chr3_4:77100551-77100570 | Msa0523670:intron | 40.0% | |
| CCAATGACTTATCTCCAACT+TGG | - | chr3_4:77100568-77100587 | None:intergenic | 40.0% | |
| ! | CCAAGTTGGAGATAAGTCAT+TGG | + | chr3_4:77100565-77100584 | Msa0523670:intron | 40.0% |
| CTGGATATCACATCCATTAC+TGG | + | chr3_4:77100678-77100697 | Msa0523670:intron | 40.0% | |
| TTTATCAGCATGGCCAGTAA+TGG | - | chr3_4:77100694-77100713 | None:intergenic | 40.0% | |
| CCATGCTGATAAATGCAGAT+GGG | + | chr3_4:77100701-77100720 | Msa0523670:intron | 40.0% | |
| TGATAAATGCAGATGGGTGT+GGG | + | chr3_4:77100707-77100726 | Msa0523670:intron | 40.0% | |
| CAAGAGGCTTTACAGTTTGA+GGG | - | chr3_4:77100745-77100764 | None:intergenic | 40.0% | |
| ACAAGAGGCTTTACAGTTTG+AGG | - | chr3_4:77100746-77100765 | None:intergenic | 40.0% | |
| !! | CTCCTTGCTTTTCATTTTGC+CGG | - | chr3_4:77100787-77100806 | None:intergenic | 40.0% |
| TTTGTAGACCGCTGTTTATC+AGG | + | chr3_4:77100829-77100848 | Msa0523670:intron | 40.0% | |
| !! | GTTCTTTTCACGTTTTGGTG+TGG | - | chr3_4:77101086-77101105 | None:intergenic | 40.0% |
| TAATGAAGGGAACTCACATG+GGG | - | chr3_4:77101370-77101389 | None:intergenic | 40.0% | |
| CCTGAATAACATATGGACAG+GGG | - | chr3_4:77101548-77101567 | None:intergenic | 40.0% | |
| GACCTGAATAACATATGGAC+AGG | - | chr3_4:77101550-77101569 | None:intergenic | 40.0% | |
| CCAAGGACCTGAATAACATA+TGG | - | chr3_4:77101555-77101574 | None:intergenic | 40.0% | |
| CCATATGTTATTCAGGTCCT+TGG | + | chr3_4:77101552-77101571 | Msa0523670:intron | 40.0% | |
| AAATAGTAGGGGAGGAAAGA+TGG | - | chr3_4:77101604-77101623 | None:intergenic | 40.0% | |
| GATTCACAAAATAGTAGGGG+AGG | - | chr3_4:77101612-77101631 | None:intergenic | 40.0% | |
| TACACAGAGCAAATGTGGAT+TGG | + | chr3_4:77101634-77101653 | Msa0523670:CDS | 40.0% | |
| ACACAGAGCAAATGTGGATT+GGG | + | chr3_4:77101635-77101654 | Msa0523670:CDS | 40.0% | |
| AGGCTTGAAAATGCGTTTAC+AGG | + | chr3_4:77101800-77101819 | Msa0523670:intron | 40.0% | |
| AAAATGCGTTTACAGGTAGG+AGG | + | chr3_4:77101807-77101826 | Msa0523670:intron | 40.0% | |
| TTAGACCCAACCAAATTCCA+AGG | + | chr3_4:77101900-77101919 | Msa0523670:intron | 40.0% | |
| TTTGATGCCACCTTGGAATT+TGG | - | chr3_4:77101913-77101932 | None:intergenic | 40.0% | |
| ! | TGCTTTGGGTCATCTGTTAT+CGG | + | chr3_4:77101945-77101964 | Msa0523670:intron | 40.0% |
| ATTGGGTGAAGATCAATGTG+CGG | + | chr3_4:77102100-77102119 | Msa0523670:CDS | 40.0% | |
| TTGCTATATCCATGTCCAGA+AGG | + | chr3_4:77102230-77102249 | Msa0523670:intron | 40.0% | |
| CAAAACAATCCTTCTGGACA+TGG | - | chr3_4:77102242-77102261 | None:intergenic | 40.0% | |
| ! | GAAGTATATGCTCTAGTTCC+TGG | + | chr3_4:77102261-77102280 | Msa0523670:CDS | 40.0% |
| !! | GTTGTGACTGTGAGTTTTAG+TGG | + | chr3_4:77102488-77102507 | Msa0523670:intron | 40.0% |
| ATGACATGACATGACCTTGA+TGG | + | chr3_4:77102795-77102814 | Msa0523670:intron | 40.0% | |
| GATTGAATGAATCCAGGTAC+GGG | + | chr3_4:77103059-77103078 | Msa0523670:intron | 40.0% | |
| GTTATAACAAGTCGTCCAAC+TGG | - | chr3_4:77103096-77103115 | None:intergenic | 40.0% | |
| !! | GTTGGACGACTTGTTATAAC+TGG | + | chr3_4:77103096-77103115 | Msa0523670:CDS | 40.0% |
| !! | CATGGATTGTCAGCATTTTC+TGG | - | chr3_4:77103126-77103145 | None:intergenic | 40.0% |
| CAGAAAATGCTGACAATCCA+TGG | + | chr3_4:77103124-77103143 | Msa0523670:CDS | 40.0% | |
| GAAAATGCTGACAATCCATG+GGG | + | chr3_4:77103126-77103145 | Msa0523670:CDS | 40.0% | |
| GGGTATTACTCCCTTCAAAA+AGG | + | chr3_4:77103146-77103165 | Msa0523670:CDS | 40.0% | |
| !! | TCTGCTGTTGTTAGTTTGCA+TGG | + | chr3_4:77103416-77103435 | Msa0523670:CDS | 40.0% |
| ! | GAGAAACCAATCATTTTCCG+GGG | - | chr3_4:77103493-77103512 | None:intergenic | 40.0% |
| ! | CGAGAAACCAATCATTTTCC+GGG | - | chr3_4:77103494-77103513 | None:intergenic | 40.0% |
| ! | GCGAGAAACCAATCATTTTC+CGG | - | chr3_4:77103495-77103514 | None:intergenic | 40.0% |
| ! | AGTGAAAGCATGGTTATGCT+AGG | + | chr3_4:77103547-77103566 | Msa0523670:three_prime_UTR | 40.0% |
| GGTAAAATACCCAAATGCAC+TGG | + | chr3_4:77103640-77103659 | Msa0523670:three_prime_UTR | 40.0% | |
| CATATTGCACCAGTGCATTT+GGG | - | chr3_4:77103652-77103671 | None:intergenic | 40.0% | |
| !! | GTTGTTCAAGTTGAGGAGTG+AGG | - | chr3_4:77098068-77098087 | None:intergenic | 45.0% |
| ATGGCTGCTTATGATGAAGC+CGG | + | chr3_4:77098242-77098261 | Msa0523670:CDS | 45.0% | |
| ATAAAGGCTTCTCGCTCCAT+AGG | - | chr3_4:77098272-77098291 | None:intergenic | 45.0% | |
| TCGAGCATTTCTACAGATCG+AGG | + | chr3_4:77098300-77098319 | Msa0523670:CDS | 45.0% | |
| TTTCTACAGATCGAGGTCCT+TGG | + | chr3_4:77098307-77098326 | Msa0523670:CDS | 45.0% | |
| GGGACTTGATAAAACTTGGG+AGG | - | chr3_4:77098341-77098360 | None:intergenic | 45.0% | |
| CCCATATACCTAATGCCGTA+AGG | + | chr3_4:77098485-77098504 | Msa0523670:intron | 45.0% | |
| ACGTTACGGAGAGCAATAAC+GGG | - | chr3_4:77098565-77098584 | None:intergenic | 45.0% | |
| !! | CTTATTTTCTCATCGGCTGC+AGG | + | chr3_4:77098639-77098658 | Msa0523670:intron | 45.0% |
| TGGAGAGCTGTTATCAGACT+AGG | + | chr3_4:77098665-77098684 | Msa0523670:CDS | 45.0% | |
| AGAGCTGTTATCAGACTAGG+TGG | + | chr3_4:77098668-77098687 | Msa0523670:CDS | 45.0% | |
| CTGCACCATGCGTTCTTATT+GGG | - | chr3_4:77098812-77098831 | None:intergenic | 45.0% | |
| ACTGCACCATGCGTTCTTAT+TGG | - | chr3_4:77098813-77098832 | None:intergenic | 45.0% | |
| ATAAGAACGCATGGTGCAGT+TGG | + | chr3_4:77098813-77098832 | Msa0523670:intron | 45.0% | |
| !! | CTTTAGGGCAACACAGGTAT+CGG | - | chr3_4:77098875-77098894 | None:intergenic | 45.0% |
| ! | CCAAGTCTTATCACGCTAGA+TGG | - | chr3_4:77098938-77098957 | None:intergenic | 45.0% |
| CCATCTAGCGTGATAAGACT+TGG | + | chr3_4:77098935-77098954 | Msa0523670:intron | 45.0% | |
| AGGTAACTGCATCGAAGTTG+TGG | + | chr3_4:77099147-77099166 | Msa0523670:intron | 45.0% | |
| TAACTGCATCGAAGTTGTGG+CGG | + | chr3_4:77099150-77099169 | Msa0523670:CDS | 45.0% | |
| ACAGCAGAAATGCGAGATGA+CGG | - | chr3_4:77099252-77099271 | None:intergenic | 45.0% | |
| GCCTCTATATCACCATCTCA+TGG | + | chr3_4:77099592-77099611 | Msa0523670:intron | 45.0% | |
| GCCATGAGATGGTGATATAG+AGG | - | chr3_4:77099596-77099615 | None:intergenic | 45.0% | |
| TGTCCTTGTGACAGAACTTC+TGG | + | chr3_4:77099622-77099641 | Msa0523670:intron | 45.0% | |
| ATCAGGCAAGTGGCTAGAAA+AGG | - | chr3_4:77099733-77099752 | None:intergenic | 45.0% | |
| GAAACAGAAGATCAGGCAAG+TGG | - | chr3_4:77099743-77099762 | None:intergenic | 45.0% | |
| TTTCCACACTCGATGGTTGA+TGG | - | chr3_4:77099869-77099888 | None:intergenic | 45.0% | |
| ACCATCGAGTGTGGAAAAAG+AGG | + | chr3_4:77099872-77099891 | Msa0523670:CDS | 45.0% | |
| ! | ACCTCTTTTTCCACACTCGA+TGG | - | chr3_4:77099876-77099895 | None:intergenic | 45.0% |
| TCAAACCCATTCCACGACAA+AGG | - | chr3_4:77099984-77100003 | None:intergenic | 45.0% | |
| ! | AGCACTGTTGGCTACTCTAT+TGG | - | chr3_4:77100660-77100679 | None:intergenic | 45.0% |
| AATAGAGTAGCCAACAGTGC+TGG | + | chr3_4:77100659-77100678 | Msa0523670:intron | 45.0% | |
| GATGTGATATCCAGCACTGT+TGG | - | chr3_4:77100672-77100691 | None:intergenic | 45.0% | |
| GCCATGCTGATAAATGCAGA+TGG | + | chr3_4:77100700-77100719 | Msa0523670:intron | 45.0% | |
| CCCATCTGCATTTATCAGCA+TGG | - | chr3_4:77100704-77100723 | None:intergenic | 45.0% | |
| CTGATAAATGCAGATGGGTG+TGG | + | chr3_4:77100706-77100725 | Msa0523670:intron | 45.0% | |
| ! | ATTTTGCCGGAGATAACCAG+CGG | - | chr3_4:77100774-77100793 | None:intergenic | 45.0% |
| CTCCGGCAAAATGAAAAGCA+AGG | + | chr3_4:77100782-77100801 | Msa0523670:intron | 45.0% | |
| AGTCAGCTGTTAAGGTCTGT+TGG | + | chr3_4:77100945-77100964 | Msa0523670:intron | 45.0% | |
| GTCAGCTGTTAAGGTCTGTT+GGG | + | chr3_4:77100946-77100965 | Msa0523670:intron | 45.0% | |
| AACAAACAGAGAACACCGTC+TGG | + | chr3_4:77101204-77101223 | Msa0523670:CDS | 45.0% | |
| GACAGAGCTGCAAACATAGA+AGG | + | chr3_4:77101234-77101253 | Msa0523670:CDS | 45.0% | |
| CTGCAAACATAGAAGGAGAC+AGG | + | chr3_4:77101241-77101260 | Msa0523670:CDS | 45.0% | |
| GAGACAGGCAGTTAAGTTAC+TGG | + | chr3_4:77101256-77101275 | Msa0523670:CDS | 45.0% | |
| AATGAAGGGAACTCACATGG+GGG | - | chr3_4:77101369-77101388 | None:intergenic | 45.0% | |
| CCCCTGTCCATATGTTATTC+AGG | + | chr3_4:77101545-77101564 | Msa0523670:intron | 45.0% | |
| AACCTTAAGAGCAGTCTCCA+AGG | - | chr3_4:77101572-77101591 | None:intergenic | 45.0% | |
| ! | CACAGAGCAAATGTGGATTG+GGG | + | chr3_4:77101636-77101655 | Msa0523670:CDS | 45.0% |
| AGGCATCCCTCTCTATAATC+CGG | + | chr3_4:77101827-77101846 | Msa0523670:intron | 45.0% | |
| TGCCACCTTGGAATTTGGTT+GGG | - | chr3_4:77101908-77101927 | None:intergenic | 45.0% | |
| ATGCCACCTTGGAATTTGGT+TGG | - | chr3_4:77101909-77101928 | None:intergenic | 45.0% | |
| GATAGACTTTGATGCCACCT+TGG | - | chr3_4:77101920-77101939 | None:intergenic | 45.0% | |
| ! | ACAGATGACCCAAAGCATCT+TGG | - | chr3_4:77101942-77101961 | None:intergenic | 45.0% |
| ! | GCTTTGGGTCATCTGTTATC+GGG | + | chr3_4:77101946-77101965 | Msa0523670:intron | 45.0% |
| TCATCTGTTATCGGGTCACT+TGG | + | chr3_4:77101954-77101973 | Msa0523670:intron | 45.0% | |
| CATCTGTTATCGGGTCACTT+GGG | + | chr3_4:77101955-77101974 | Msa0523670:intron | 45.0% | |
| TGATCTTCACCCAATCAGCT+GGG | - | chr3_4:77102095-77102114 | None:intergenic | 45.0% | |
| TTGATCTTCACCCAATCAGC+TGG | - | chr3_4:77102096-77102115 | None:intergenic | 45.0% | |
| TTGGGTGAAGATCAATGTGC+GGG | + | chr3_4:77102101-77102120 | Msa0523670:CDS | 45.0% | |
| GAAGATCAATGTGCGGGAAA+CGG | + | chr3_4:77102107-77102126 | Msa0523670:CDS | 45.0% | |
| CTAGCGATGCCGAAATTACT+AGG | + | chr3_4:77102426-77102445 | Msa0523670:intron | 45.0% | |
| CGATGCCGAAATTACTAGGT+TGG | + | chr3_4:77102430-77102449 | Msa0523670:intron | 45.0% | |
| AACTCACAGTCACAACTGTG+AGG | - | chr3_4:77102484-77102503 | None:intergenic | 45.0% | |
| !!! | TACTGAGCTGTTTTGGCTGT+TGG | + | chr3_4:77102715-77102734 | Msa0523670:intron | 45.0% |
| AACAAGTCGTCCAACTGGAT+CGG | - | chr3_4:77103091-77103110 | None:intergenic | 45.0% | |
| TTGAAGGGAGTAATACCCCA+TGG | - | chr3_4:77103144-77103163 | None:intergenic | 45.0% | |
| ACAACAGCAGATGTTTGGAG+TGG | - | chr3_4:77103407-77103426 | None:intergenic | 45.0% | |
| TTTCCTCCCCGGAAAATGAT+TGG | + | chr3_4:77103484-77103503 | Msa0523670:three_prime_UTR | 45.0% | |
| ! | AAACCAATCATTTTCCGGGG+AGG | - | chr3_4:77103490-77103509 | None:intergenic | 45.0% |
| GCATATTGCACCAGTGCATT+TGG | - | chr3_4:77103653-77103672 | None:intergenic | 45.0% | |
| ! | ATGCACTGGTGCAATATGCT+TGG | + | chr3_4:77103654-77103673 | Msa0523670:three_prime_UTR | 45.0% |
| !! | TATTAAAAAATATAACTTTA+GGG | - | chr3_4:77098890-77098909 | None:intergenic | 5.0% |
| !! | TTATTAAAAAATATAACTTT+AGG | - | chr3_4:77098891-77098910 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAATCAATTTAA+AGG | - | chr3_4:77102201-77102220 | None:intergenic | 5.0% |
| CTTGGGAGGCTTGAATTCCA+AGG | - | chr3_4:77098327-77098346 | None:intergenic | 50.0% | |
| !! | GTTTTAGGTGGAGATGTGGG+TGG | + | chr3_4:77098507-77098526 | Msa0523670:intron | 50.0% |
| ! | TTCTCATCGGCTGCAGGTTA+TGG | + | chr3_4:77098645-77098664 | Msa0523670:intron | 50.0% |
| CAGACTAGGTGGCTATGAAG+TGG | + | chr3_4:77098679-77098698 | Msa0523670:CDS | 50.0% | |
| TCTTTCCACCCTCCCAAGTA+AGG | + | chr3_4:77099185-77099204 | Msa0523670:intron | 50.0% | |
| CAGCAGAAATGCGAGATGAC+GGG | - | chr3_4:77099251-77099270 | None:intergenic | 50.0% | |
| AGACTGTAGTGCAAGTCCTG+TGG | - | chr3_4:77099430-77099449 | None:intergenic | 50.0% | |
| GGACTTGCACTACAGTCTCA+TGG | + | chr3_4:77099432-77099451 | Msa0523670:intron | 50.0% | |
| GGACAACTCATGCCATGAGA+TGG | - | chr3_4:77099607-77099626 | None:intergenic | 50.0% | |
| ! | GTTGATGGAGTGATCCGACA+GGG | - | chr3_4:77099854-77099873 | None:intergenic | 50.0% |
| ACTCCATCAACCATCGAGTG+TGG | + | chr3_4:77099863-77099882 | Msa0523670:CDS | 50.0% | |
| TAACCAGCGGTCTAGACAAG+AGG | - | chr3_4:77100761-77100780 | None:intergenic | 50.0% | |
| ! | TCTAGACCGCTGGTTATCTC+CGG | + | chr3_4:77100765-77100784 | Msa0523670:intron | 50.0% |
| GGTTCCTGAGTCAGCTGTTA+AGG | + | chr3_4:77100937-77100956 | Msa0523670:CDS | 50.0% | |
| ! | CAGACCTTAACAGCTGACTC+AGG | - | chr3_4:77100944-77100963 | None:intergenic | 50.0% |
| ACAGAGAACACCGTCTGGTA+TGG | + | chr3_4:77101209-77101228 | Msa0523670:CDS | 50.0% | |
| GCTCTGTCATCCATACCAGA+CGG | - | chr3_4:77101222-77101241 | None:intergenic | 50.0% | |
| GTCCTTGGAGACTGCTCTTA+AGG | + | chr3_4:77101567-77101586 | Msa0523670:CDS | 50.0% | |
| GACCCAACCAAATTCCAAGG+TGG | + | chr3_4:77101903-77101922 | Msa0523670:intron | 50.0% | |
| !! | TAGGTTGGTCACAGCAGTAG+TGG | + | chr3_4:77102059-77102078 | Msa0523670:intron | 50.0% |
| !! | GTCACAGCAGTAGTGGACAT+TGG | + | chr3_4:77102066-77102085 | Msa0523670:CDS | 50.0% |
| ATCTTCACCCAATCAGCTGG+GGG | - | chr3_4:77102093-77102112 | None:intergenic | 50.0% | |
| GATCTTCACCCAATCAGCTG+GGG | - | chr3_4:77102094-77102113 | None:intergenic | 50.0% | |
| CAGAGGTTACCTCTTCACGA+AGG | - | chr3_4:77102290-77102309 | None:intergenic | 50.0% | |
| ! | TAGGTTGGACAACTTCACCC+AGG | + | chr3_4:77102445-77102464 | Msa0523670:intron | 50.0% |
| ACTTCACCCAGGTTCAAACC+CGG | + | chr3_4:77102456-77102475 | Msa0523670:intron | 50.0% | |
| ! | AGTCACAACTGTGAGGTACC+GGG | - | chr3_4:77102477-77102496 | None:intergenic | 50.0% |
| CAGTCACAACTGTGAGGTAC+CGG | - | chr3_4:77102478-77102497 | None:intergenic | 50.0% | |
| ! | TTTGGGGTATGTAGGCGAAG+TGG | - | chr3_4:77102520-77102539 | None:intergenic | 50.0% |
| TCGCAGGTAAGTTCACAACC+TGG | - | chr3_4:77103376-77103395 | None:intergenic | 50.0% | |
| TGGAGTGGATCAATTCTCGC+AGG | - | chr3_4:77103392-77103411 | None:intergenic | 50.0% | |
| ! | GCTGTGTGAATTTTCCTCCC+CGG | + | chr3_4:77103473-77103492 | Msa0523670:exon | 50.0% |
| ! | AGGAACTAGTCTAGCCCTGT+TGG | + | chr3_4:77103567-77103586 | Msa0523670:three_prime_UTR | 50.0% |
| AGAGGAAGAAGAGTGAGCCG+TGG | + | chr3_4:77097531-77097550 | Msa0523670:five_prime_UTR | 55.0% | |
| AAGAAGAGTGAGCCGTGGAG+AGG | + | chr3_4:77097536-77097555 | Msa0523670:five_prime_UTR | 55.0% | |
| TGATGAAGCCGGTACGCCTA+TGG | + | chr3_4:77098253-77098272 | Msa0523670:CDS | 55.0% | |
| TTCTCGCTCCATAGGCGTAC+CGG | - | chr3_4:77098264-77098283 | None:intergenic | 55.0% | |
| GGTGGTGTCTTCCTCTCTTG+TGG | + | chr3_4:77098525-77098544 | Msa0523670:intron | 55.0% | |
| TCGAAGTTGTGGCGGTCAGT+AGG | + | chr3_4:77099158-77099177 | Msa0523670:CDS | 55.0% | |
| CTAGTCCTTACTTGGGAGGG+TGG | - | chr3_4:77099193-77099212 | None:intergenic | 55.0% | |
| !! | GGTTGATGGAGTGATCCGAC+AGG | - | chr3_4:77099855-77099874 | None:intergenic | 55.0% |
| TATTGCTCTTTGCCCCCCTC+TGG | + | chr3_4:77099901-77099920 | Msa0523670:intron | 55.0% | |
| AAGCCTCTTGTCTAGACCGC+TGG | + | chr3_4:77100755-77100774 | Msa0523670:intron | 55.0% | |
| ACCGCTGTTTATCAGGCTCC+AGG | + | chr3_4:77100836-77100855 | Msa0523670:CDS | 55.0% | |
| GCCTGGAGCCTGATAAACAG+CGG | - | chr3_4:77100840-77100859 | None:intergenic | 55.0% | |
| GTTTATCAGGCTCCAGGCTC+AGG | + | chr3_4:77100842-77100861 | Msa0523670:CDS | 55.0% | |
| CTGCACGTGCAATGCAAGGT+TGG | + | chr3_4:77100885-77100904 | Msa0523670:CDS | 55.0% | |
| TTGGCATGCTCAGCGCCTTA+TGG | + | chr3_4:77100904-77100923 | Msa0523670:CDS | 55.0% | |
| TGGCATGCTCAGCGCCTTAT+GGG | + | chr3_4:77100905-77100924 | Msa0523670:CDS | 55.0% | |
| GCTCAGCGCCTTATGGGATA+CGG | + | chr3_4:77100911-77100930 | Msa0523670:CDS | 55.0% | |
| GAACCTCGCCGTATCCCATA+AGG | - | chr3_4:77100922-77100941 | None:intergenic | 55.0% | |
| TGGACAGGGGCAGTACCAAT+GGG | - | chr3_4:77101535-77101554 | None:intergenic | 55.0% | |
| ATGGACAGGGGCAGTACCAA+TGG | - | chr3_4:77101536-77101555 | None:intergenic | 55.0% | |
| ACATTGGACCCCCAGCTGAT+TGG | + | chr3_4:77102082-77102101 | Msa0523670:CDS | 55.0% | |
| CATTGGACCCCCAGCTGATT+GGG | + | chr3_4:77102083-77102102 | Msa0523670:CDS | 55.0% | |
| ATGTGCGGGAAACGGTCAGT+CGG | + | chr3_4:77102115-77102134 | Msa0523670:intron | 55.0% | |
| !! | GAGGTACCGGGTTTGAACCT+GGG | - | chr3_4:77102465-77102484 | None:intergenic | 55.0% |
| !! | TGAGGTACCGGGTTTGAACC+TGG | - | chr3_4:77102466-77102485 | None:intergenic | 55.0% |
| GTCGTCCAACTGGATCGGAT+TGG | - | chr3_4:77103086-77103105 | None:intergenic | 55.0% | |
| TGTACGCGTTCCTTTCGAGC+AGG | + | chr3_4:77103448-77103467 | Msa0523670:CDS | 55.0% | |
| GTACGCGTTCCTTTCGAGCA+GGG | + | chr3_4:77103449-77103468 | Msa0523670:CDS | 55.0% | |
| AAGAGTGAGCCGTGGAGAGG+TGG | + | chr3_4:77097539-77097558 | Msa0523670:five_prime_UTR | 60.0% | |
| TCAGCAGCTCCACCTCTCCA+CGG | - | chr3_4:77097551-77097570 | None:intergenic | 60.0% | |
| GGGGAGTTACAGCTCCCTGT+CGG | + | chr3_4:77099837-77099856 | Msa0523670:CDS | 60.0% | |
| ATCAGGCTCCAGGCTCAGGT+AGG | + | chr3_4:77100846-77100865 | Msa0523670:CDS | 60.0% | |
| TCAGGCTCCAGGCTCAGGTA+GGG | + | chr3_4:77100847-77100866 | Msa0523670:CDS | 60.0% | |
| AGGGGCAGTACCAATGGGTG+GGG | - | chr3_4:77101530-77101549 | None:intergenic | 60.0% | |
| CAGGGGCAGTACCAATGGGT+GGG | - | chr3_4:77101531-77101550 | None:intergenic | 60.0% | |
| ACAGGGGCAGTACCAATGGG+TGG | - | chr3_4:77101532-77101551 | None:intergenic | 60.0% | |
| CGGGAAACGGTCAGTCGGTT+TGG | + | chr3_4:77102120-77102139 | Msa0523670:intron | 60.0% | |
| TCCTGGGCTCCTTCGTGAAG+AGG | + | chr3_4:77102278-77102297 | Msa0523670:CDS | 60.0% | |
| ACCTCTTCACGAAGGAGCCC+AGG | - | chr3_4:77102282-77102301 | None:intergenic | 60.0% | |
| TCGGCATCGCTAGTTGCGCT+AGG | - | chr3_4:77102419-77102438 | None:intergenic | 60.0% | |
| ! | GATCGGATTGGACCCGTACC+TGG | - | chr3_4:77103074-77103093 | None:intergenic | 60.0% |
| CGGGTCCAATCCGATCCAGT+TGG | + | chr3_4:77103078-77103097 | Msa0523670:CDS | 60.0% | |
| CACACAGCTCCCTGCTCGAA+AGG | - | chr3_4:77103461-77103480 | None:intergenic | 60.0% | |
| GCAGCAGCAGCATCAGCAGC+AGG | - | chr3_4:77098018-77098037 | None:intergenic | 65.0% | |
| GCGGCTGCACGTGCAATGCA+AGG | + | chr3_4:77100881-77100900 | Msa0523670:CDS | 65.0% | |
| GCGCCTTATGGGATACGGCG+AGG | + | chr3_4:77100916-77100935 | Msa0523670:CDS | 65.0% | |
| GGGGCAGTACCAATGGGTGG+GGG | - | chr3_4:77101529-77101548 | None:intergenic | 65.0% | |
| CTCCAGGCTCAGGTAGGGCG+CGG | + | chr3_4:77100852-77100871 | Msa0523670:CDS | 70.0% | |
| AGGCTCAGGTAGGGCGCGGA+GGG | + | chr3_4:77100856-77100875 | Msa0523670:CDS | 70.0% | |
| AGGTAGGGCGCGGAGGGATG+CGG | + | chr3_4:77100862-77100881 | Msa0523670:CDS | 70.0% | |
| CTCCGCGCCCTACCTGAGCC+TGG | - | chr3_4:77100857-77100876 | None:intergenic | 75.0% | |
| CAGGCTCAGGTAGGGCGCGG+AGG | + | chr3_4:77100855-77100874 | Msa0523670:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 77097526 | 77103764 | 77097526 | ID=Msa0523670;Name=Msa0523670 |
| chr3_4 | mRNA | 77097526 | 77103764 | 77097526 | ID=Msa0523670-mRNA-1;Parent=Msa0523670;Name=Msa0523670-mRNA-1;_AED=0.24;_eAED=0.24;_QI=256|0.8|0.81|1|0.73|0.75|16|283|436 |
| chr3_4 | exon | 77097526 | 77097612 | 77097526 | ID=Msa0523670-mRNA-1:exon:22528;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77097635 | 77097793 | 77097635 | ID=Msa0523670-mRNA-1:exon:22529;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77097933 | 77098152 | 77097933 | ID=Msa0523670-mRNA-1:exon:22530;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77098242 | 77098375 | 77098242 | ID=Msa0523670-mRNA-1:exon:22531;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77098661 | 77098700 | 77098661 | ID=Msa0523670-mRNA-1:exon:22532;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77099149 | 77099201 | 77099149 | ID=Msa0523670-mRNA-1:exon:22533;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77099433 | 77099478 | 77099433 | ID=Msa0523670-mRNA-1:exon:22534;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77099801 | 77099893 | 77099801 | ID=Msa0523670-mRNA-1:exon:22535;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77100836 | 77100958 | 77100836 | ID=Msa0523670-mRNA-1:exon:22536;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77101067 | 77101118 | 77101067 | ID=Msa0523670-mRNA-1:exon:22537;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77101196 | 77101277 | 77101196 | ID=Msa0523670-mRNA-1:exon:22538;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77101567 | 77101680 | 77101567 | ID=Msa0523670-mRNA-1:exon:22539;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77102062 | 77102128 | 77102062 | ID=Msa0523670-mRNA-1:exon:22540;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77102249 | 77102347 | 77102249 | ID=Msa0523670-mRNA-1:exon:22541;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77103075 | 77103167 | 77103075 | ID=Msa0523670-mRNA-1:exon:22542;Parent=Msa0523670-mRNA-1 |
| chr3_4 | exon | 77103377 | 77103764 | 77103377 | ID=Msa0523670-mRNA-1:exon:22543;Parent=Msa0523670-mRNA-1 |
| chr3_4 | five_prime_UTR | 77097526 | 77097612 | 77097526 | ID=Msa0523670-mRNA-1:five_prime_utr;Parent=Msa0523670-mRNA-1 |
| chr3_4 | five_prime_UTR | 77097635 | 77097793 | 77097635 | ID=Msa0523670-mRNA-1:five_prime_utr;Parent=Msa0523670-mRNA-1 |
| chr3_4 | five_prime_UTR | 77097933 | 77097942 | 77097933 | ID=Msa0523670-mRNA-1:five_prime_utr;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77097943 | 77098152 | 77097943 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77098242 | 77098375 | 77098242 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77098661 | 77098700 | 77098661 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77099149 | 77099201 | 77099149 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77099433 | 77099478 | 77099433 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77099801 | 77099893 | 77099801 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77100836 | 77100958 | 77100836 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77101067 | 77101118 | 77101067 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77101196 | 77101277 | 77101196 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77101567 | 77101680 | 77101567 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77102062 | 77102128 | 77102062 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77102249 | 77102347 | 77102249 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77103075 | 77103167 | 77103075 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | CDS | 77103377 | 77103481 | 77103377 | ID=Msa0523670-mRNA-1:cds;Parent=Msa0523670-mRNA-1 |
| chr3_4 | three_prime_UTR | 77103482 | 77103764 | 77103482 | ID=Msa0523670-mRNA-1:three_prime_utr;Parent=Msa0523670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
