AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0527000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0527000 MtrunA17_Chr7g0270831 89.310 449 27 8 1 444 1 433 0.0 759
Msa0527000 MtrunA17_Chr4g0075201 42.247 445 190 13 31 413 39 478 2.51e-81 259
Msa0527000 MtrunA17_Chr2g0288871 42.283 473 173 16 33 413 67 531 1.41e-79 256
Msa0527000 MtrunA17_Chr2g0322391 57.269 227 83 4 200 413 332 557 4.33e-72 238
Msa0527000 MtrunA17_Chr3g0099641 37.416 449 202 13 16 411 22 444 1.50e-71 233
Msa0527000 MtrunA17_Chr2g0302391 44.094 254 103 8 187 421 182 415 1.30e-54 187
Msa0527000 MtrunA17_Chr4g0025051 61.146 157 57 2 202 357 320 473 3.61e-54 190
Msa0527000 MtrunA17_Chr4g0024391 45.064 233 106 4 202 415 214 443 5.92e-53 184
Msa0527000 MtrunA17_Chr4g0025061 55.491 173 71 3 188 357 329 498 2.23e-52 185
Msa0527000 MtrunA17_Chr7g0216891 36.948 249 98 2 102 291 45 293 1.69e-45 166
Msa0527000 MtrunA17_Chr4g0051181 40.711 253 112 5 199 414 225 476 9.67e-42 154
Msa0527000 MtrunA17_Chr4g0060271 55.901 161 57 2 191 337 229 389 5.50e-40 151
Msa0527000 MtrunA17_Chr1g0150271 35.266 207 89 7 95 287 6 181 7.03e-31 119
Msa0527000 MtrunA17_Chr2g0333851 29.688 320 155 12 95 408 54 309 7.22e-30 118
Msa0527000 MtrunA17_Chr4g0001361 29.338 317 158 9 101 408 51 310 1.42e-28 114
Msa0527000 MtrunA17_Chr1g0150281 30.631 222 139 3 72 291 6 214 4.47e-26 107
Msa0527000 MtrunA17_Chr5g0419241 85.417 48 7 0 200 247 60 107 1.68e-25 100
Msa0527000 MtrunA17_Chr5g0445311 47.959 98 46 2 189 282 332 428 7.23e-25 107
Msa0527000 MtrunA17_Chr3g0101131 51.807 83 39 1 197 279 395 476 9.85e-24 103
Msa0527000 MtrunA17_Chr7g0249311 40.000 145 76 5 161 297 328 469 2.28e-23 103
Msa0527000 MtrunA17_Chr7g0249311 50.000 60 28 2 218 277 180 237 8.37e-12 67.4
Msa0527000 MtrunA17_Chr3g0136961 53.425 73 34 0 202 274 123 195 2.29e-23 99.8
Msa0527000 MtrunA17_Chr7g0243891 44.068 118 55 2 162 279 329 435 2.70e-23 102
Msa0527000 MtrunA17_Chr7g0218081 52.326 86 40 1 204 289 397 481 3.16e-23 102
Msa0527000 MtrunA17_Chr7g0218081 51.667 60 27 2 218 277 229 286 3.66e-12 68.2
Msa0527000 MtrunA17_Chr7g0270191 36.667 150 69 4 201 330 129 272 4.85e-23 98.6
Msa0527000 MtrunA17_Chr3g0106491 53.247 77 35 1 201 277 349 424 6.52e-23 101
Msa0527000 MtrunA17_Chr3g0106491 50.000 62 29 2 218 279 199 258 1.41e-12 69.3
Msa0527000 MtrunA17_Chr1g0150801 52.703 74 34 1 202 275 87 159 8.53e-23 94.7
Msa0527000 MtrunA17_Chr7g0224801 46.988 83 43 1 206 288 82 163 1.06e-22 94.7
Msa0527000 MtrunA17_Chr3g0079691 50.602 83 40 1 200 282 478 559 1.62e-22 100
Msa0527000 MtrunA17_Chr3g0079691 52.459 61 27 2 218 278 281 339 1.47e-13 72.8
Msa0527000 MtrunA17_Chr4g0004911 53.247 77 35 1 201 277 320 395 2.09e-22 99.8
Msa0527000 MtrunA17_Chr4g0004911 35.577 104 62 2 187 286 150 252 7.93e-15 76.3
Msa0527000 MtrunA17_Chr5g0418191 46.939 98 51 1 204 301 307 403 2.56e-22 99.0
Msa0527000 MtrunA17_Chr5g0418191 35.238 105 66 2 218 322 152 254 8.44e-13 70.1
Msa0527000 MtrunA17_Chr5g0447701 49.412 85 42 1 202 286 237 320 2.96e-22 98.2
Msa0527000 MtrunA17_Chr5g0447701 35.714 112 63 4 186 294 62 167 2.03e-12 68.6
Msa0527000 MtrunA17_Chr4g0042831 42.727 110 62 1 188 297 249 357 4.92e-22 97.4
Msa0527000 MtrunA17_Chr4g0042831 40.964 83 47 2 218 300 146 226 9.31e-11 63.5
Msa0527000 MtrunA17_Chr2g0294231 50.649 77 37 1 201 277 187 262 7.62e-22 96.7
Msa0527000 MtrunA17_Chr7g0249301 45.556 90 45 2 193 279 265 353 1.98e-21 95.5
Msa0527000 MtrunA17_Chr7g0249301 47.692 65 32 2 213 277 58 120 2.62e-12 68.2
Msa0527000 MtrunA17_Chr8g0386241 43.902 82 45 1 202 283 88 168 2.25e-21 91.3
Msa0527000 MtrunA17_Chr5g0432161 45.977 87 46 1 201 287 405 490 2.60e-21 96.7
Msa0527000 MtrunA17_Chr5g0432161 50.000 60 28 2 218 277 245 302 1.61e-12 69.3
Msa0527000 MtrunA17_Chr4g0051881 47.525 101 41 3 204 299 165 258 2.67e-21 94.7
Msa0527000 MtrunA17_Chr1g0194481 50.649 77 37 1 201 277 142 217 1.18e-20 92.4
Msa0527000 MtrunA17_Chr4g0068541 47.059 85 43 2 201 285 192 274 7.96e-20 91.3
Msa0527000 MtrunA17_Chr8g0383251 45.946 74 39 1 204 277 95 167 1.00e-19 86.7
Msa0527000 MtrunA17_Chr5g0418781 41.228 114 53 3 161 274 81 180 2.66e-19 87.8
Msa0527000 MtrunA17_Chr7g0263531 47.945 73 37 1 205 277 349 420 2.98e-19 89.7
Msa0527000 MtrunA17_Chr7g0263531 50.000 60 28 2 218 277 190 247 1.21e-11 66.2
Msa0527000 MtrunA17_Chr4g0074001 50.633 79 38 1 199 277 341 418 3.48e-19 90.1
Msa0527000 MtrunA17_Chr7g0270051 50.704 71 35 0 215 285 51 121 6.36e-19 86.3
Msa0527000 MtrunA17_Chr8g0379461 50.588 85 40 2 198 281 57 140 7.42e-19 85.5
Msa0527000 MtrunA17_Chr5g0443131 48.649 74 37 1 204 277 144 216 2.58e-18 85.5
Msa0527000 MtrunA17_Chr1g0147881 38.406 138 69 5 153 276 186 321 3.02e-18 85.5
Msa0527000 MtrunA17_Chr3g0129321 42.857 91 47 2 187 277 92 177 3.90e-18 82.8
Msa0527000 MtrunA17_Chr3g0129361 47.297 74 38 1 201 274 128 200 4.26e-18 82.8
Msa0527000 MtrunA17_Chr7g0248721 38.000 150 64 7 153 275 50 197 5.17e-18 82.8
Msa0527000 MtrunA17_Chr2g0284321 54.839 62 28 0 217 278 35 96 7.11e-18 82.0
Msa0527000 MtrunA17_Chr8g0335811 46.667 75 39 1 200 274 137 210 1.42e-17 81.6
Msa0527000 MtrunA17_Chr4g0053281 53.226 62 29 0 218 279 267 328 1.51e-17 83.6
Msa0527000 MtrunA17_Chr2g0293481 50.000 70 35 0 217 286 267 336 1.58e-17 84.7
Msa0527000 MtrunA17_Chr8g0348311 50.000 72 36 0 215 286 153 224 1.59e-17 83.6
Msa0527000 MtrunA17_Chr2g0319961 44.545 110 51 3 178 277 31 140 1.70e-17 82.0
Msa0527000 MtrunA17_Chr1g0184691 52.239 67 32 0 218 284 294 360 1.81e-17 83.6
Msa0527000 MtrunA17_Chr5g0401821 47.297 74 39 0 203 276 185 258 2.59e-17 81.6
Msa0527000 MtrunA17_Chr8g0383351 51.562 64 30 1 211 274 154 216 3.56e-17 80.5
Msa0527000 MtrunA17_Chr7g0248691 50.000 72 36 0 215 286 152 223 9.72e-17 80.9
Msa0527000 MtrunA17_Chr7g0228941 47.887 71 37 0 204 274 39 109 1.30e-16 75.9
Msa0527000 MtrunA17_Chr4g0071521 53.226 62 29 0 213 274 241 302 2.20e-16 79.7
Msa0527000 MtrunA17_Chr1g0188941 48.485 66 33 1 212 277 46 110 2.71e-16 74.7
Msa0527000 MtrunA17_Chr2g0289181 46.970 66 35 0 212 277 9 74 1.05e-15 76.3
Msa0527000 MtrunA17_Chr3g0139021 44.595 74 41 0 201 274 298 371 1.58e-15 78.2
Msa0527000 MtrunA17_Chr8g0387501 35.165 91 59 0 216 306 128 218 4.62e-15 75.1
Msa0527000 MtrunA17_Chr3g0126391 53.333 75 32 2 201 273 118 191 6.14e-15 75.9
Msa0527000 MtrunA17_Chr7g0238921 54.688 64 28 1 215 278 122 184 1.78e-14 73.9
Msa0527000 MtrunA17_Chr1g0202461 45.714 70 38 0 215 284 259 328 1.97e-14 74.7
Msa0527000 MtrunA17_Chr6g0485431 46.667 75 38 2 204 277 141 214 1.99e-14 74.3
Msa0527000 MtrunA17_Chr1g0189391 45.833 72 37 2 204 274 84 154 2.59e-14 73.9
Msa0527000 MtrunA17_Chr8g0347251 36.842 114 69 2 163 273 81 194 1.39e-13 71.6
Msa0527000 MtrunA17_Chr7g0244971 31.250 144 96 2 159 300 66 208 1.51e-13 70.9
Msa0527000 MtrunA17_Chr7g0244981 34.722 144 90 3 159 300 66 207 2.82e-13 70.1
Msa0527000 MtrunA17_Chr8g0387981 50.000 74 34 2 202 273 118 190 3.81e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0527000 AT4G01720.1 42.178 505 196 14 11 444 10 489 1.10e-87 276
Msa0527000 AT4G04450.1 37.083 480 199 14 31 411 28 503 5.73e-77 249
Msa0527000 AT4G04450.2 40.452 398 158 9 92 411 13 409 4.53e-75 241
Msa0527000 AT1G62300.1 52.140 257 87 7 200 421 295 550 3.20e-65 219
Msa0527000 AT4G22070.4 71.631 141 38 1 200 338 280 420 7.15e-52 183
Msa0527000 AT4G22070.3 71.631 141 38 1 200 338 280 420 7.15e-52 183
Msa0527000 AT4G22070.2 71.631 141 38 1 200 338 280 420 7.15e-52 183
Msa0527000 AT4G22070.1 71.631 141 38 1 200 338 280 420 7.15e-52 183
Msa0527000 AT1G68150.1 41.518 224 101 5 101 298 97 316 1.88e-46 165
Msa0527000 AT5G15130.2 41.288 264 95 6 201 413 169 423 1.00e-45 166
Msa0527000 AT5G15130.1 41.288 264 95 6 201 413 211 465 1.24e-45 166
Msa0527000 AT1G18860.1 56.291 151 57 2 195 338 219 367 1.09e-39 149
Msa0527000 AT1G69810.2 47.977 173 81 5 181 351 111 276 4.23e-39 144
Msa0527000 AT1G69810.1 48.538 171 79 5 183 351 171 334 6.80e-39 145
Msa0527000 AT1G80840.1 29.023 348 183 12 72 414 9 297 4.33e-29 116
Msa0527000 AT4G31800.1 36.323 223 124 6 87 295 36 254 1.73e-28 114
Msa0527000 AT2G25000.1 33.019 212 112 5 78 282 23 211 1.40e-24 102
Msa0527000 AT2G25000.3 34.031 191 97 4 99 282 22 190 5.31e-24 100
Msa0527000 AT2G25000.2 34.211 190 96 4 100 282 1 168 6.89e-24 99.8
Msa0527000 AT2G25000.4 34.211 190 96 4 100 282 1 168 6.89e-24 99.8
Msa0527000 AT4G26640.5 42.609 115 60 2 178 287 161 274 1.09e-23 102
Msa0527000 AT4G26640.5 37.736 106 63 3 208 313 26 128 5.65e-12 67.4
Msa0527000 AT4G26640.6 42.609 115 60 2 178 287 161 274 1.09e-23 102
Msa0527000 AT4G26640.6 37.736 106 63 3 208 313 26 128 5.65e-12 67.4
Msa0527000 AT4G26640.4 42.609 115 60 2 178 287 161 274 1.09e-23 102
Msa0527000 AT4G26640.4 37.736 106 63 3 208 313 26 128 5.65e-12 67.4
Msa0527000 AT4G26640.3 42.609 115 60 2 178 287 161 274 1.09e-23 102
Msa0527000 AT4G26640.3 37.736 106 63 3 208 313 26 128 5.65e-12 67.4
Msa0527000 AT4G31800.2 46.535 101 49 2 200 295 89 189 1.93e-23 99.0
Msa0527000 AT4G26640.1 42.609 115 60 2 178 287 265 378 2.39e-23 102
Msa0527000 AT4G26640.1 37.736 106 63 3 208 313 130 232 7.87e-12 67.4
Msa0527000 AT4G26640.7 42.609 115 60 2 178 287 297 410 3.07e-23 102
Msa0527000 AT4G26640.7 37.736 106 63 3 208 313 162 264 9.06e-12 67.4
Msa0527000 AT4G26640.2 42.609 115 60 2 178 287 337 450 3.42e-23 102
Msa0527000 AT4G26640.2 37.736 106 63 3 208 313 202 304 9.74e-12 67.4
Msa0527000 AT4G18170.1 44.348 115 48 3 178 277 118 231 5.87e-23 99.4
Msa0527000 AT5G49520.1 51.948 77 36 1 201 277 205 280 6.46e-23 100
Msa0527000 AT2G38470.1 50.633 79 38 1 201 279 346 423 7.32e-23 101
Msa0527000 AT2G38470.1 50.000 60 28 2 218 277 185 242 1.90e-12 69.7
Msa0527000 AT1G29860.1 42.241 116 54 4 201 316 120 222 1.35e-22 97.4
Msa0527000 AT5G26170.1 51.389 72 34 1 203 274 99 169 1.57e-22 94.4
Msa0527000 AT2G04880.2 45.882 85 45 1 203 287 269 352 7.18e-22 98.2
Msa0527000 AT2G04880.2 39.175 97 51 3 215 305 109 203 6.03e-13 70.9
Msa0527000 AT1G13960.2 55.405 74 32 1 204 277 243 315 8.24e-22 96.7
Msa0527000 AT1G13960.2 43.820 89 42 4 207 290 61 146 5.03e-13 70.5
Msa0527000 AT2G04880.1 45.882 85 45 1 203 287 293 376 9.48e-22 97.8
Msa0527000 AT2G04880.1 45.070 71 37 2 215 285 109 177 2.49e-12 68.9
Msa0527000 AT1G13960.1 55.405 74 32 1 204 277 396 468 9.55e-22 98.2
Msa0527000 AT1G13960.1 43.820 89 42 4 207 290 214 299 3.74e-13 71.6
Msa0527000 AT5G56270.1 51.250 80 38 1 200 279 470 548 1.73e-21 97.8
Msa0527000 AT5G07100.2 51.948 77 36 1 201 277 125 200 1.91e-21 92.8
Msa0527000 AT5G07100.4 51.948 77 36 1 201 277 125 200 1.91e-21 92.8
Msa0527000 AT5G07100.5 51.948 77 36 1 201 277 125 200 1.91e-21 92.8
Msa0527000 AT5G07100.3 51.948 77 36 1 201 277 125 200 1.91e-21 92.8
Msa0527000 AT2G03340.1 51.899 79 37 1 204 282 402 479 2.28e-21 97.1
Msa0527000 AT2G03340.1 50.000 60 28 2 218 277 251 308 2.85e-12 68.9
Msa0527000 AT5G07100.1 51.948 77 36 1 201 277 218 293 2.83e-21 94.4
Msa0527000 AT2G46130.1 46.237 93 39 2 183 275 6 87 3.17e-21 89.0
Msa0527000 AT2G30250.1 50.633 79 38 1 201 279 312 389 1.12e-20 94.0
Msa0527000 AT5G41570.1 52.000 75 35 1 201 275 82 155 1.20e-20 89.4
Msa0527000 AT5G13080.1 52.055 73 34 1 204 276 54 125 1.54e-20 88.2
Msa0527000 AT5G46350.1 51.351 74 35 1 204 277 170 242 1.55e-20 92.4
Msa0527000 AT1G64000.1 52.778 72 33 1 204 275 101 171 1.65e-20 89.4
Msa0527000 AT2G47260.1 45.918 98 48 2 201 294 158 254 2.99e-20 92.0
Msa0527000 AT4G30935.1 50.633 79 38 1 199 277 313 390 6.83e-20 92.4
Msa0527000 AT3G01080.1 51.351 74 35 1 204 277 293 365 7.20e-20 91.7
Msa0527000 AT3G01080.1 40.659 91 49 3 218 305 168 256 4.42e-12 68.2
Msa0527000 AT3G01080.2 51.351 74 35 1 204 277 331 403 7.92e-20 92.0
Msa0527000 AT3G01080.2 40.659 91 49 3 218 305 206 294 4.48e-12 68.2
Msa0527000 AT4G26440.1 49.367 79 39 1 201 279 356 433 1.00e-19 92.0
Msa0527000 AT4G26440.1 49.180 61 29 2 218 278 179 237 1.39e-11 67.0
Msa0527000 AT1G55600.1 46.835 79 41 1 201 279 291 368 2.50e-19 90.5
Msa0527000 AT1G69310.4 38.835 103 53 2 172 274 111 203 2.51e-19 88.2
Msa0527000 AT1G69310.2 38.835 103 53 2 172 274 111 203 2.51e-19 88.2
Msa0527000 AT1G69310.1 38.835 103 53 2 172 274 111 203 2.51e-19 88.2
Msa0527000 AT3G62340.1 53.247 77 35 1 201 277 102 177 2.70e-19 88.2
Msa0527000 AT3G01970.1 52.778 72 33 1 203 274 51 121 2.98e-19 84.7
Msa0527000 AT2G23320.1 47.619 84 36 1 201 276 216 299 5.17e-19 87.8
Msa0527000 AT5G64810.1 47.887 71 36 1 204 274 97 166 9.40e-19 84.3
Msa0527000 AT1G29280.1 47.500 80 41 1 198 277 56 134 9.61e-19 86.3
Msa0527000 AT2G30590.1 47.126 87 38 1 201 279 289 375 1.15e-18 87.8
Msa0527000 AT5G28650.1 46.341 82 36 1 201 274 238 319 2.22e-18 86.3
Msa0527000 AT4G39410.1 47.297 74 38 1 201 274 207 279 9.85e-18 84.0
Msa0527000 AT3G04670.1 45.122 82 37 1 201 274 238 319 9.99e-18 84.3
Msa0527000 AT4G24240.1 50.685 73 36 0 204 276 268 340 1.27e-17 84.3
Msa0527000 AT3G58710.2 49.383 81 38 1 208 288 61 138 1.37e-17 82.8
Msa0527000 AT3G58710.1 49.383 81 38 1 208 288 62 139 1.39e-17 82.8
Msa0527000 AT5G52830.1 52.778 72 34 0 215 286 163 234 1.64e-17 84.0
Msa0527000 AT2G34830.1 45.783 83 44 1 203 284 200 282 1.70e-17 84.7
Msa0527000 AT4G31800.3 35.714 182 99 6 87 254 36 213 1.80e-17 82.0
Msa0527000 AT2G44745.1 39.560 91 54 1 184 274 112 201 1.82e-17 81.6
Msa0527000 AT2G34830.2 45.783 83 44 1 203 284 209 291 1.94e-17 84.7
Msa0527000 AT1G30650.1 45.783 83 44 1 203 284 202 284 2.52e-17 84.3
Msa0527000 AT2G24570.1 57.895 57 24 0 218 274 244 300 6.97e-17 81.6
Msa0527000 AT4G01250.1 48.611 72 37 0 215 286 126 197 1.35e-16 80.5
Msa0527000 AT2G37260.3 49.333 75 34 2 212 283 264 337 1.41e-16 81.3
Msa0527000 AT2G37260.3 41.935 93 43 4 195 282 67 153 4.13e-13 70.9
Msa0527000 AT2G37260.2 49.333 75 34 2 212 283 262 335 1.45e-16 81.3
Msa0527000 AT2G37260.2 41.935 93 43 4 195 282 65 151 4.15e-13 70.9
Msa0527000 AT4G31550.1 56.140 57 25 0 218 274 247 303 2.09e-16 80.5
Msa0527000 AT4G31550.2 56.140 57 25 0 218 274 246 302 2.13e-16 80.5
Msa0527000 AT4G23550.1 43.210 81 46 0 212 292 135 215 2.70e-16 79.7
Msa0527000 AT2G37260.1 49.333 75 34 2 212 283 344 417 2.82e-16 80.9
Msa0527000 AT2G37260.1 41.935 93 43 4 195 282 147 233 6.54e-13 70.9
Msa0527000 AT2G46130.2 43.011 93 38 3 183 275 6 83 2.91e-16 74.7
Msa0527000 AT5G45050.1 40.000 95 55 1 217 309 1180 1274 4.75e-15 78.6
Msa0527000 AT5G45050.2 40.000 95 55 1 217 309 1152 1246 4.77e-15 78.2
Msa0527000 AT5G45050.4 40.000 95 55 1 217 309 1041 1135 5.17e-15 78.2
Msa0527000 AT1G69310.3 35.922 103 52 3 172 274 111 199 2.23e-14 73.9
Msa0527000 AT2G21900.1 32.231 121 72 3 197 317 92 202 2.82e-13 68.9
Msa0527000 AT5G43290.1 31.159 138 75 5 152 274 38 170 3.39e-13 70.1
Msa0527000 AT5G45260.1 40.860 93 49 2 202 292 1197 1285 2.33e-12 69.7
Msa0527000 AT3G01080.3 40.659 91 49 3 218 305 206 294 2.78e-12 68.2
Msa0527000 AT2G46400.1 44.000 75 40 1 201 273 88 162 2.97e-12 67.8
Msa0527000 AT2G40740.1 46.667 75 35 2 218 287 174 248 5.98e-12 66.6
Msa0527000 AT2G40740.3 46.667 75 35 2 218 287 183 257 7.88e-12 66.2
Msa0527000 AT3G56400.1 34.821 112 70 2 165 273 67 178 5.44e-11 63.9

Find 112 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTAAAACGTTACGTTAAC+AGG 0.198700 3_4:-81157150 None:intergenic
GCCAAAGCTGTAGTAAAATT+TGG 0.236789 3_4:-81161866 None:intergenic
GGATGTCAGTGGAGGAAATA+TGG 0.326047 3_4:+81159943 Msa0527000:CDS
GAATAATAATGCATTGGTTT+CGG 0.333185 3_4:+81159514 Msa0527000:CDS
ATGCAACATCCGCAACTACT+AGG 0.336584 3_4:+81161737 Msa0527000:CDS
GAGGAACTCTGGAGAGGTTA+TGG 0.338532 3_4:-81161697 None:intergenic
TTGTAGTTGGCTATAGCTTT+TGG 0.341519 3_4:-81157526 None:intergenic
TTTATTACCTGTTTGCGAAC+TGG 0.349172 3_4:-81160033 None:intergenic
GCAACCACCACCTTCATCTA+TGG 0.378686 3_4:+81161811 Msa0527000:CDS
GCAGTTGCAGCTGGTGGGAG+TGG 0.382339 3_4:-81161500 None:intergenic
TTGCGTGGGTTCTTCTAACT+TGG 0.393374 3_4:-81159594 None:intergenic
GGAAGGGTTGAGAAGCTGAT+AGG 0.399322 3_4:-81161646 None:intergenic
GAATCTTCTGCAGGATGATC+AGG 0.403070 3_4:-81159560 None:intergenic
GCAGCGATTTCATCAATCAT+TGG 0.419822 3_4:+81161890 Msa0527000:CDS
TTATTACCTGTTTGCGAACT+GGG 0.426338 3_4:-81160032 None:intergenic
AGATCCTCCGATCAAAGAAA+TGG 0.429845 3_4:+81157020 Msa0527000:CDS
AAAATTTGGATCCGAAGAAA+TGG 0.435237 3_4:-81161852 None:intergenic
TGTTAGTGCAGCCATTTCTT+CGG 0.448790 3_4:+81161841 Msa0527000:CDS
GATGGTAATAATAATCTTGC+AGG 0.450084 3_4:+81161929 Msa0527000:CDS
ATTCACAGTGGTGGTGGTGG+TGG 0.456766 3_4:-81156951 None:intergenic
TTTGCTATGGCAGTTGCAGC+TGG 0.458465 3_4:-81161509 None:intergenic
TTATCCTTCTTAAGCTCCTC+CGG 0.460563 3_4:+81156973 Msa0527000:CDS
CGATAGTAGGCACGAGGACA+AGG 0.465488 3_4:-81159988 None:intergenic
AGCTTCTGATCTTGCACGTA+TGG 0.466004 3_4:-81159648 None:intergenic
TGCCTACTATCGTTGCACTA+TGG 0.467155 3_4:+81159999 Msa0527000:CDS
CAGAATGTGGAAGAAAATCA+TGG 0.469000 3_4:+81159467 Msa0527000:intron
TGCCATAGCAAACACAATAT+CGG 0.470288 3_4:+81161520 Msa0527000:CDS
AAGAAATCCATTTCTTTGAT+CGG 0.475782 3_4:-81157027 None:intergenic
CAGTTGCAGCTGGTGGGAGT+GGG 0.476377 3_4:-81161499 None:intergenic
TCTTGAAAATTCTGAAACTG+AGG 0.483824 3_4:+81157317 Msa0527000:CDS
AGGATGCCCAGTTCGCAAAC+AGG 0.487149 3_4:+81160026 Msa0527000:CDS
TGCAACATCCGCAACTACTA+GGG 0.489367 3_4:+81161738 Msa0527000:CDS
CTTGCAGGTGTAGTTCCTGC+AGG 0.491341 3_4:+81161944 Msa0527000:CDS
CTGGTGGGAGTGGGTGAGTG+TGG 0.492649 3_4:-81161490 None:intergenic
AACCTCATCAACACTTAGAA+AGG 0.495655 3_4:+81161571 Msa0527000:CDS
TGGTAGAGGAGGAGGAACTC+TGG 0.501730 3_4:-81161708 None:intergenic
GTACTTGACATTGTTGCATA+GGG 0.502525 3_4:-81161623 None:intergenic
GAGAATGTAGTGCATGATTG+AGG 0.502863 3_4:-81161980 None:intergenic
GGTACTTGACATTGTTGCAT+AGG 0.510259 3_4:-81161624 None:intergenic
AGGATAATTCACAGTGGTGG+TGG 0.512011 3_4:-81156957 None:intergenic
GTCGAGGGTGATTGTTGGGA+AGG 0.512231 3_4:-81161663 None:intergenic
AATAATGCATTGGTTTCGGA+TGG 0.512362 3_4:+81159518 Msa0527000:CDS
ATTGGTTTCGGATGGAAAGC+AGG 0.513871 3_4:+81159526 Msa0527000:CDS
TGCGGATGTTGCATTTGAAA+TGG 0.519053 3_4:-81161728 None:intergenic
ATACACACCTGACCATGGTC+TGG 0.520004 3_4:-81157582 None:intergenic
AAATGAATTAGATAAATATC+CGG 0.520203 3_4:-81161600 None:intergenic
TGCAAGATCAGAAGCTCCCC+TGG 0.525707 3_4:+81159655 Msa0527000:CDS
GCTATGGCAGTTGCAGCTGG+TGG 0.526091 3_4:-81161506 None:intergenic
ATTTGAAATGGTAGAGGAGG+AGG 0.528697 3_4:-81161716 None:intergenic
TCAAGTCGAGGGTGATTGTT+GGG 0.528867 3_4:-81161667 None:intergenic
TACCACCATTACTTCAACTA+GGG 0.533321 3_4:+81161789 Msa0527000:CDS
CTACCACCATTACTTCAACT+AGG 0.538586 3_4:+81161788 Msa0527000:CDS
CATGGCAGCATCATCAAAGA+AGG 0.547257 3_4:+81157096 Msa0527000:CDS
GAAGGGTTGAGAAGCTGATA+GGG 0.548942 3_4:-81161645 None:intergenic
GTTGTTGTGGAGGAAGTCGC+CGG 0.550845 3_4:-81156992 None:intergenic
TTCTAACTTGGATGAGTGTG+AGG 0.554307 3_4:-81159582 None:intergenic
GTCAAGTCGAGGGTGATTGT+TGG 0.556628 3_4:-81161668 None:intergenic
CTATGGCAGTTGCAGCTGGT+GGG 0.556898 3_4:-81161505 None:intergenic
TGCCGATATTGTGTTTGCTA+TGG 0.556910 3_4:-81161522 None:intergenic
GATCTATACTGTTGTTGTGG+AGG 0.557992 3_4:-81157002 None:intergenic
TGTTGCATTTGAAATGGTAG+AGG 0.559296 3_4:-81161722 None:intergenic
TTCCTTTCTAAGTGTTGATG+AGG 0.560288 3_4:-81161573 None:intergenic
AGCCATAGTGCAACGATAGT+AGG 0.563933 3_4:-81160001 None:intergenic
GGAAGCTGAGGTGAACCTGC+AGG 0.565063 3_4:-81161959 None:intergenic
TGAACAACTGAGCTTGTAGT+TGG 0.569201 3_4:-81157539 None:intergenic
ACACTTAGAAAGGAATCAGC+CGG 0.572173 3_4:+81161581 Msa0527000:CDS
TGCATTTGAAATGGTAGAGG+AGG 0.572439 3_4:-81161719 None:intergenic
AAATCCATTTCTTTGATCGG+AGG 0.572624 3_4:-81157024 None:intergenic
ACACTCTCAACCATAGATGA+AGG 0.575020 3_4:-81161821 None:intergenic
ACGAGGACAAGGGTTACCCT+TGG 0.579166 3_4:-81159977 None:intergenic
ATAATTCACAGTGGTGGTGG+TGG 0.579236 3_4:-81156954 None:intergenic
GAGGATCTATACTGTTGTTG+TGG 0.580320 3_4:-81157005 None:intergenic
TCGAGGGTGATTGTTGGGAA+GGG 0.581698 3_4:-81161662 None:intergenic
GTCGCCGGAGGAGCTTAAGA+AGG 0.581732 3_4:-81156977 None:intergenic
TCTGCAGGATGATCAGGAGG+AGG 0.584649 3_4:-81159554 None:intergenic
GAAAGGAATTAGGTCTTGCG+TGG 0.585330 3_4:-81159609 None:intergenic
GAGTGTGAGGAATCTTCTGC+AGG 0.593547 3_4:-81159569 None:intergenic
GGAGCACAAAGAGGTGGTGA+TGG 0.595155 3_4:+81161911 Msa0527000:CDS
AGAATGTGGAAGAAAATCAT+GGG 0.597126 3_4:+81159468 Msa0527000:intron
GGATTAACCCCTAGTAGTTG+CGG 0.597913 3_4:-81161746 None:intergenic
TATCGTTGCACTATGGCTGT+AGG 0.598056 3_4:+81160006 Msa0527000:CDS
GGTTGCCCTAGTTGAAGTAA+TGG 0.602040 3_4:-81161794 None:intergenic
AGCTTCTGTGAGAAGAACAA+TGG 0.606352 3_4:-81161767 None:intergenic
TGTGGAAGAAAATCATGGGA+TGG 0.610182 3_4:+81159472 Msa0527000:CDS
ATCATTGGAGCACAAAGAGG+TGG 0.623691 3_4:+81161905 Msa0527000:CDS
AAAGGAATTAGGTCTTGCGT+GGG 0.624304 3_4:-81159608 None:intergenic
TGCTGAGTGAGGAGTAGTGT+TGG 0.633875 3_4:-81157123 None:intergenic
TCAATCATTGGAGCACAAAG+AGG 0.634714 3_4:+81161902 Msa0527000:CDS
CTGCAGGATGATCAGGAGGA+GGG 0.634928 3_4:-81159553 None:intergenic
TCTTGCACGTATGGAAACCC+TGG 0.642973 3_4:-81159639 None:intergenic
TAACAGGATCATGCTGAGTG+AGG 0.647028 3_4:-81157134 None:intergenic
TGCTTGAAAGTGAATTGAGG+AGG 0.651482 3_4:+81157457 Msa0527000:CDS
TCTTCTGCAGGATGATCAGG+AGG 0.653590 3_4:-81159557 None:intergenic
AGAAGGATAATTCACAGTGG+TGG 0.654696 3_4:-81156960 None:intergenic
GAGGAGGAGGAACTCTGGAG+AGG 0.655992 3_4:-81161703 None:intergenic
CAAACATACACACCTGACCA+TGG 0.657184 3_4:-81157587 None:intergenic
TCAACCATAGATGAAGGTGG+TGG 0.660007 3_4:-81161815 None:intergenic
GCAACATCCGCAACTACTAG+GGG 0.665695 3_4:+81161739 Msa0527000:CDS
TGCCCTAGTTGAAGTAATGG+TGG 0.667028 3_4:-81161791 None:intergenic
AGATCAGCGATGGATGTCAG+TGG 0.669830 3_4:+81159932 Msa0527000:intron
GATAGTAGGCACGAGGACAA+GGG 0.677877 3_4:-81159987 None:intergenic
GTTGTGGAGGAAGTCGCCGG+AGG 0.678902 3_4:-81156989 None:intergenic
TCAGCGATGGATGTCAGTGG+AGG 0.680116 3_4:+81159935 Msa0527000:CDS
GTATGCTTGAAAGTGAATTG+AGG 0.687225 3_4:+81157454 Msa0527000:CDS
CTCTCAACCATAGATGAAGG+TGG 0.688697 3_4:-81161818 None:intergenic
ATACTAATAACAACATACGA+AGG 0.689011 3_4:+81161464 Msa0527000:CDS
GTGCATGATTGAGGAAGCTG+AGG 0.696083 3_4:-81161971 None:intergenic
GCTTGAAAGTGAATTGAGGA+GGG 0.713652 3_4:+81157458 Msa0527000:CDS
GAAGATGATCAAGATCAACA+TGG 0.728705 3_4:+81157078 Msa0527000:CDS
GTGCAACGATAGTAGGCACG+AGG 0.731065 3_4:-81159994 None:intergenic
AATGATTGATGAAATCGCTG+CGG 0.740375 3_4:-81161888 None:intergenic
TTAAGAAGGATAATTCACAG+TGG 0.816305 3_4:-81156963 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATTAATTTTTTTTA+GGG + chr3_4:81157926-81157945 Msa0527000:intron 0.0%
!!! AAATTAAGAAAGTTAAATTT+TGG - chr3_4:81157362-81157381 None:intergenic 10.0%
!!! TTCAAATATATATTTTTCTT+TGG + chr3_4:81157971-81157990 Msa0527000:intron 10.0%
!!! TCAAATATATATTTTTCTTT+GGG + chr3_4:81157972-81157991 Msa0527000:intron 10.0%
!!! TATATAAGAAAATATTTTCT+TGG + chr3_4:81158034-81158053 Msa0527000:intron 10.0%
!!! ACTTTTATTTAAAAAATTGA+CGG - chr3_4:81158389-81158408 None:intergenic 10.0%
!! GTTATATTTATATATATACT+TGG + chr3_4:81159759-81159778 Msa0527000:intron 10.0%
!!! TTTTTTTTTATGTTTTGAAA+TGG + chr3_4:81160390-81160409 Msa0527000:intron 10.0%
!!! AATTTTATTGAAAAATATGA+AGG - chr3_4:81160805-81160824 None:intergenic 10.0%
!!! AATATGAATTTTTATGTTTT+TGG + chr3_4:81160897-81160916 Msa0527000:intron 10.0%
!!! AATTAAGATAATATCTTTTA+GGG - chr3_4:81161144-81161163 None:intergenic 10.0%
!! TTTACTAGTATATATATATT+AGG - chr3_4:81161394-81161413 None:intergenic 10.0%
!!! TTTGAAGAACATATATATTT+TGG + chr3_4:81157386-81157405 Msa0527000:intron 15.0%
!! GAAAATTAATAATCAAATGT+TGG - chr3_4:81157629-81157648 None:intergenic 15.0%
!! ACTATCTTTAATAAAATGTT+GGG - chr3_4:81158203-81158222 None:intergenic 15.0%
!! TACTATCTTTAATAAAATGT+TGG - chr3_4:81158204-81158223 None:intergenic 15.0%
!!! TATTTTAAACATATTATAGG+CGG - chr3_4:81158271-81158290 None:intergenic 15.0%
!!! TATGTTTAAAATAATACAGT+CGG + chr3_4:81158278-81158297 Msa0527000:intron 15.0%
!! ATAAAACAACTAGATATATA+AGG + chr3_4:81158302-81158321 Msa0527000:intron 15.0%
!!! CTTTTATTTAAAAAATTGAC+GGG - chr3_4:81158388-81158407 None:intergenic 15.0%
!!! AAATTGTTTTTACATTGTTT+TGG - chr3_4:81158424-81158443 None:intergenic 15.0%
!!! TAATTAAAGATCATATTTTC+AGG + chr3_4:81158443-81158462 Msa0527000:intron 15.0%
!!! TACTCGTTAATTATATATTT+TGG - chr3_4:81158472-81158491 None:intergenic 15.0%
!! ACAATAGATAAAATATTGTA+GGG - chr3_4:81158931-81158950 None:intergenic 15.0%
!! TACAATAGATAAAATATTGT+AGG - chr3_4:81158932-81158951 None:intergenic 15.0%
!!! TAAAAAACAGTTTCTTTTTA+AGG + chr3_4:81159086-81159105 Msa0527000:intron 15.0%
!!! TAATTAGTGTAATTTAAAGT+AGG + chr3_4:81159292-81159311 Msa0527000:intron 15.0%
!!! TTTTTTGAATAATAATGCAT+TGG + chr3_4:81159508-81159527 Msa0527000:CDS 15.0%
!! TTAATTAATATATAGTACCA+GGG - chr3_4:81159675-81159694 None:intergenic 15.0%
!! ATTAATTAATATATAGTACC+AGG - chr3_4:81159676-81159695 None:intergenic 15.0%
!! ATATAAATATAACTGTACAA+TGG - chr3_4:81159752-81159771 None:intergenic 15.0%
!!! TATATTTTACTAAAATTCAG+AGG - chr3_4:81160139-81160158 None:intergenic 15.0%
!!! ATTTTACCATAAATGATATT+GGG + chr3_4:81160166-81160185 Msa0527000:intron 15.0%
!!! GGATATACATATTTTATATA+GGG - chr3_4:81160233-81160252 None:intergenic 15.0%
!!! TAATTTTAAGAGATTATTTG+TGG + chr3_4:81160261-81160280 Msa0527000:intron 15.0%
!!! TCTAATATAAAACTTTAAGA+TGG - chr3_4:81160581-81160600 None:intergenic 15.0%
!! TATTACTCTTTATAAAAGAT+AGG + chr3_4:81160644-81160663 Msa0527000:intron 15.0%
!! ATTACTCTTTATAAAAGATA+GGG + chr3_4:81160645-81160664 Msa0527000:intron 15.0%
!!! TAATAACATTTTCTAGAAAT+GGG - chr3_4:81161001-81161020 None:intergenic 15.0%
!!! TTAATAACATTTTCTAGAAA+TGG - chr3_4:81161002-81161021 None:intergenic 15.0%
!!! GAATTAAGATAATATCTTTT+AGG - chr3_4:81161145-81161164 None:intergenic 15.0%
!! AAATGAATTAGATAAATATC+CGG - chr3_4:81161603-81161622 None:intergenic 15.0%
!!! TCTTCTTTGTTGTTTTTATT+AGG - chr3_4:81157063-81157082 None:intergenic 20.0%
!!! AATAATGATTTGTTTGTTTC+TGG + chr3_4:81157708-81157727 Msa0527000:intron 20.0%
!! ATCTATTCATTTCATTTCTT+TGG + chr3_4:81157862-81157881 Msa0527000:intron 20.0%
!! CTAGAAAGAAAAAAAATTGA+GGG - chr3_4:81158136-81158155 None:intergenic 20.0%
!! ACTAGAAAGAAAAAAAATTG+AGG - chr3_4:81158137-81158156 None:intergenic 20.0%
!!! TATTGTCATTTCTAGTTTAA+AGG - chr3_4:81158234-81158253 None:intergenic 20.0%
!!! ATTTTAAACATATTATAGGC+GGG - chr3_4:81158270-81158289 None:intergenic 20.0%
!!! TTCTTATTTAGTTGTTTTGT+TGG - chr3_4:81158557-81158576 None:intergenic 20.0%
!! AAAATTAGTGAAATGTTAAC+CGG + chr3_4:81158750-81158769 Msa0527000:intron 20.0%
!! ATAAAATGGAAATACTAGAA+AGG - chr3_4:81159168-81159187 None:intergenic 20.0%
!! CATTTAATAGTTATGAACAA+AGG + chr3_4:81159430-81159449 Msa0527000:intron 20.0%
!! TAATTAATATATAGTACCAG+GGG - chr3_4:81159674-81159693 None:intergenic 20.0%
!!! ATTTATATATATACTTGGTG+AGG + chr3_4:81159764-81159783 Msa0527000:intron 20.0%
!! CAATATCATTTATGGTAAAA+TGG - chr3_4:81160167-81160186 None:intergenic 20.0%
!!! CATTTTACCATAAATGATAT+TGG + chr3_4:81160165-81160184 Msa0527000:intron 20.0%
!!! GGGATATACATATTTTATAT+AGG - chr3_4:81160234-81160253 None:intergenic 20.0%
!! AAAATATGTATATCCCAATT+TGG + chr3_4:81160238-81160257 Msa0527000:intron 20.0%
!! TCTCTTAAAATTACCAAATT+GGG - chr3_4:81160254-81160273 None:intergenic 20.0%
!! ATCTCTTAAAATTACCAAAT+TGG - chr3_4:81160255-81160274 None:intergenic 20.0%
!! ATCAAATGTTGGTATATTTA+GGG - chr3_4:81160689-81160708 None:intergenic 20.0%
!! AATCAAATGTTGGTATATTT+AGG - chr3_4:81160690-81160709 None:intergenic 20.0%
!!! TCATAGATAGAAAATTTTAG+AGG - chr3_4:81160747-81160766 None:intergenic 20.0%
!!! CAATAAAATTTTCCAGAAAA+AGG + chr3_4:81160815-81160834 Msa0527000:intron 20.0%
!!! TTTAGGGTTAAATATGTAAA+TGG - chr3_4:81161128-81161147 None:intergenic 20.0%
!!! TAATTCTTTTATGTGAAACT+TGG + chr3_4:81161159-81161178 Msa0527000:intron 20.0%
! AAGAAATCCATTTCTTTGAT+CGG - chr3_4:81157030-81157049 None:intergenic 25.0%
!! ATTTAAAACGTTACGTTAAC+AGG - chr3_4:81157153-81157172 None:intergenic 25.0%
!!! TAATTTGTTTTCATACAGAC+TGG + chr3_4:81157249-81157268 Msa0527000:intron 25.0%
! AGTCATCAATAAAGAAAACA+AGG + chr3_4:81157775-81157794 Msa0527000:intron 25.0%
! GTCATCAATAAAGAAAACAA+GGG + chr3_4:81157776-81157795 Msa0527000:intron 25.0%
!! TTTTAAACATATTATAGGCG+GGG - chr3_4:81158269-81158288 None:intergenic 25.0%
!! TGTCTCATTTTATAGTAGTT+CGG + chr3_4:81158340-81158359 Msa0527000:intron 25.0%
! TATTCTCCTTATTCTAGTAT+GGG + chr3_4:81158966-81158985 Msa0527000:intron 25.0%
! ATATTTCCCATACTAGAATA+AGG - chr3_4:81158975-81158994 None:intergenic 25.0%
! ACTGGTTAAACATACTAAAA+AGG + chr3_4:81159012-81159031 Msa0527000:intron 25.0%
!!! AGGCGGTTTTTAATTTTAAA+AGG - chr3_4:81159218-81159237 None:intergenic 25.0%
!!! TATAGATCGTTTTGTTGAAA+AGG - chr3_4:81159261-81159280 None:intergenic 25.0%
! ATGAACAAAGGTAATATTTG+TGG + chr3_4:81159442-81159461 Msa0527000:intron 25.0%
!!! GAATAATAATGCATTGGTTT+CGG + chr3_4:81159514-81159533 Msa0527000:CDS 25.0%
!! TTTTCTTCAAAAGACTGAAT+AGG + chr3_4:81160315-81160334 Msa0527000:intron 25.0%
! TTTCTTCAAAAGACTGAATA+GGG + chr3_4:81160316-81160335 Msa0527000:intron 25.0%
! TTATTAATTGAGTTCTGCAA+TGG + chr3_4:81160413-81160432 Msa0527000:intron 25.0%
! GATAGGGTTAAATAAGTAAA+TGG + chr3_4:81160661-81160680 Msa0527000:intron 25.0%
! TCAAATGTTGGTATATTTAG+GGG - chr3_4:81160688-81160707 None:intergenic 25.0%
!!! AGCCTAAGAAATATTTTAGT+GGG - chr3_4:81160718-81160737 None:intergenic 25.0%
!!! AAGCCTAAGAAATATTTTAG+TGG - chr3_4:81160719-81160738 None:intergenic 25.0%
!! CATAATATTCTACCTTTTTC+TGG - chr3_4:81160830-81160849 None:intergenic 25.0%
! ACATGAATTGACTAAAAACT+AGG + chr3_4:81161038-81161057 Msa0527000:intron 25.0%
! CATGAATTGACTAAAAACTA+GGG + chr3_4:81161039-81161058 Msa0527000:intron 25.0%
!!! TCATGAATGGAAATTTTTAG+AGG + chr3_4:81161069-81161088 Msa0527000:intron 25.0%
!!! CATGAATGGAAATTTTTAGA+GGG + chr3_4:81161070-81161089 Msa0527000:intron 25.0%
!! ATTTTTATCTATTGAGCTTG+TGG + chr3_4:81161182-81161201 Msa0527000:intron 25.0%
! ATACTAATAACAACATACGA+AGG + chr3_4:81161464-81161483 Msa0527000:CDS 25.0%
TTAAGAAGGATAATTCACAG+TGG - chr3_4:81156966-81156985 None:intergenic 30.0%
!! TCTTGAAAATTCTGAAACTG+AGG + chr3_4:81157317-81157336 Msa0527000:CDS 30.0%
!! GAAAGTTAAATTTTGGTCCA+TGG - chr3_4:81157355-81157374 None:intergenic 30.0%
CAAGGTTTCTAATTTAAGTG+AGG - chr3_4:81157809-81157828 None:intergenic 30.0%
CTCACTTAAATTAGAAACCT+TGG + chr3_4:81157807-81157826 Msa0527000:intron 30.0%
!! TGTCATTTCTAGTTTAAAGG+TGG - chr3_4:81158231-81158250 None:intergenic 30.0%
! GCTTATTCAAGATTTTGTTG+CGG - chr3_4:81158535-81158554 None:intergenic 30.0%
! ACACTAGTTAACGCTTTTAA+AGG + chr3_4:81158782-81158801 Msa0527000:intron 30.0%
! CACTAGTTAACGCTTTTAAA+GGG + chr3_4:81158783-81158802 Msa0527000:intron 30.0%
CTATTCTCCTTATTCTAGTA+TGG + chr3_4:81158965-81158984 Msa0527000:intron 30.0%
CTAGTATGGGAAATATTAAC+CGG + chr3_4:81158979-81158998 Msa0527000:intron 30.0%
CTGGTTAAGCATAACAAAAA+AGG - chr3_4:81159121-81159140 None:intergenic 30.0%
AATATTTGTGGAACAGAATG+TGG + chr3_4:81159454-81159473 Msa0527000:intron 30.0%
AGAATGTGGAAGAAAATCAT+GGG + chr3_4:81159468-81159487 Msa0527000:intron 30.0%
!!! TGGCTTTTTTGAAAGGAATT+AGG - chr3_4:81159622-81159641 None:intergenic 30.0%
TAATTCCTTTCAAAAAAGCC+AGG + chr3_4:81159621-81159640 Msa0527000:CDS 30.0%
AATTCCTTTCAAAAAAGCCA+GGG + chr3_4:81159622-81159641 Msa0527000:CDS 30.0%
!!! GTTTTTTGAAGAGCTAATTG+TGG + chr3_4:81159810-81159829 Msa0527000:intron 30.0%
GAGGAAATATGGACAAAAAA+TGG + chr3_4:81159954-81159973 Msa0527000:CDS 30.0%
CTTTACAAAACCATTTCGTA+AGG + chr3_4:81160611-81160630 Msa0527000:intron 30.0%
GTCCCACTAAAATATTTCTT+AGG + chr3_4:81160713-81160732 Msa0527000:intron 30.0%
GAGGGACTAAAATAAAATGT+TGG + chr3_4:81161088-81161107 Msa0527000:intron 30.0%
! ATTTAGCTCAATTAGTGAGT+CGG - chr3_4:81161270-81161289 None:intergenic 30.0%
! TATATCTCACGATTTTACGT+AGG - chr3_4:81161323-81161342 None:intergenic 30.0%
TATACATATATTGCAACACG+TGG + chr3_4:81161339-81161358 Msa0527000:intron 30.0%
AAAATTTGGATCCGAAGAAA+TGG - chr3_4:81161855-81161874 None:intergenic 30.0%
! TCCAAATTTTACTACAGCTT+TGG + chr3_4:81161865-81161884 Msa0527000:CDS 30.0%
GATGGTAATAATAATCTTGC+AGG + chr3_4:81161929-81161948 Msa0527000:CDS 30.0%
AAATCCATTTCTTTGATCGG+AGG - chr3_4:81157027-81157046 None:intergenic 35.0%
GAAGATGATCAAGATCAACA+TGG + chr3_4:81157078-81157097 Msa0527000:CDS 35.0%
GTATGCTTGAAAGTGAATTG+AGG + chr3_4:81157454-81157473 Msa0527000:CDS 35.0%
! TTGTAGTTGGCTATAGCTTT+TGG - chr3_4:81157529-81157548 None:intergenic 35.0%
AGTTTGAAAAAAGACAGCCA+AGG - chr3_4:81157827-81157846 None:intergenic 35.0%
ACGTTTCTTGACTATACTAG+TGG - chr3_4:81157894-81157913 None:intergenic 35.0%
!! AAATGTTGGGTCTTGTTAAC+CGG - chr3_4:81158190-81158209 None:intergenic 35.0%
! TATAGTAGTTCGGTTCGAAT+CGG + chr3_4:81158350-81158369 Msa0527000:intron 35.0%
ATTTGACTCATAGAGTTGAG+AGG - chr3_4:81158691-81158710 None:intergenic 35.0%
!! TAAAAGCGTTAACTAGTGTC+CGG - chr3_4:81158781-81158800 None:intergenic 35.0%
CAGAATGTGGAAGAAAATCA+TGG + chr3_4:81159467-81159486 Msa0527000:intron 35.0%
!! AATAATGCATTGGTTTCGGA+TGG + chr3_4:81159518-81159537 Msa0527000:CDS 35.0%
AATATGCACCAGAATAGCTT+AGG - chr3_4:81159790-81159809 None:intergenic 35.0%
!! TTTTGAAGAGCTAATTGTGG+TGG + chr3_4:81159813-81159832 Msa0527000:intron 35.0%
AATTTCCACATTCATGCATG+TGG - chr3_4:81159860-81159879 None:intergenic 35.0%
! TGATGATTTTAGATCAGCGA+TGG + chr3_4:81159922-81159941 Msa0527000:intron 35.0%
ATATGGACAAAAAATGGCCA+AGG + chr3_4:81159960-81159979 Msa0527000:CDS 35.0%
TATGGACAAAAAATGGCCAA+GGG + chr3_4:81159961-81159980 Msa0527000:CDS 35.0%
TTATTACCTGTTTGCGAACT+GGG - chr3_4:81160035-81160054 None:intergenic 35.0%
TTTATTACCTGTTTGCGAAC+TGG - chr3_4:81160036-81160055 None:intergenic 35.0%
GGTAGACCCAATATCATTTA+TGG - chr3_4:81160175-81160194 None:intergenic 35.0%
AATGATATTGGGTCTACCTT+TGG + chr3_4:81160177-81160196 Msa0527000:intron 35.0%
ATCTCGTAAGAATTGTCCAA+AGG - chr3_4:81160196-81160215 None:intergenic 35.0%
!! AACATAGTGATGGATTTGAG+GGG - chr3_4:81160511-81160530 None:intergenic 35.0%
!! CAACATAGTGATGGATTTGA+GGG - chr3_4:81160512-81160531 None:intergenic 35.0%
TGTTGGTGTGTGGATATAAA+CGG + chr3_4:81160527-81160546 Msa0527000:intron 35.0%
TGTGGATATAAACGGTATGT+AGG + chr3_4:81160535-81160554 Msa0527000:intron 35.0%
GTGGGACTAAAATCAAATGT+TGG - chr3_4:81160700-81160719 None:intergenic 35.0%
TATGAAGGTTAGACATGAGT+TGG - chr3_4:81160790-81160809 None:intergenic 35.0%
CTAGGGACTAATTTCATGAA+TGG + chr3_4:81161056-81161075 Msa0527000:intron 35.0%
ATATATTGCAACACGTGGAT+CGG + chr3_4:81161344-81161363 Msa0527000:intron 35.0%
TGCCATAGCAAACACAATAT+CGG + chr3_4:81161520-81161539 Msa0527000:CDS 35.0%
AACCTCATCAACACTTAGAA+AGG + chr3_4:81161571-81161590 Msa0527000:CDS 35.0%
!! TTCCTTTCTAAGTGTTGATG+AGG - chr3_4:81161576-81161595 None:intergenic 35.0%
GTACTTGACATTGTTGCATA+GGG - chr3_4:81161626-81161645 None:intergenic 35.0%
! TGTTGCATTTGAAATGGTAG+AGG - chr3_4:81161725-81161744 None:intergenic 35.0%
TACCACCATTACTTCAACTA+GGG + chr3_4:81161789-81161808 Msa0527000:CDS 35.0%
GCCAAAGCTGTAGTAAAATT+TGG - chr3_4:81161869-81161888 None:intergenic 35.0%
AATGATTGATGAAATCGCTG+CGG - chr3_4:81161891-81161910 None:intergenic 35.0%
AGAAGGATAATTCACAGTGG+TGG - chr3_4:81156963-81156982 None:intergenic 40.0%
TTATCCTTCTTAAGCTCCTC+CGG + chr3_4:81156973-81156992 Msa0527000:CDS 40.0%
GATCTATACTGTTGTTGTGG+AGG - chr3_4:81157005-81157024 None:intergenic 40.0%
GAGGATCTATACTGTTGTTG+TGG - chr3_4:81157008-81157027 None:intergenic 40.0%
AGATCCTCCGATCAAAGAAA+TGG + chr3_4:81157020-81157039 Msa0527000:CDS 40.0%
TGAGGTTTGTGTATGTACCA+TGG + chr3_4:81157335-81157354 Msa0527000:intron 40.0%
TGCTTGAAAGTGAATTGAGG+AGG + chr3_4:81157457-81157476 Msa0527000:CDS 40.0%
GCTTGAAAGTGAATTGAGGA+GGG + chr3_4:81157458-81157477 Msa0527000:CDS 40.0%
TGAACAACTGAGCTTGTAGT+TGG - chr3_4:81157542-81157561 None:intergenic 40.0%
CAGAAACAAAAACCAGACCA+TGG + chr3_4:81157570-81157589 Msa0527000:CDS 40.0%
TAGTTCCTTAACTAGTGCTC+CGG + chr3_4:81158159-81158178 Msa0527000:intron 40.0%
AAACATATTATAGGCGGGGT+AGG - chr3_4:81158265-81158284 None:intergenic 40.0%
!! AAAAGCGTTAACTAGTGTCC+GGG - chr3_4:81158780-81158799 None:intergenic 40.0%
!! GAATTCTTAAAAGAGTGCCC+CGG + chr3_4:81158887-81158906 Msa0527000:intron 40.0%
!! AATTCTTAAAAGAGTGCCCC+GGG + chr3_4:81158888-81158907 Msa0527000:intron 40.0%
TAGTATGTTTAACCAGTGCC+CGG - chr3_4:81159009-81159028 None:intergenic 40.0%
TGTTATGCTTAACCAGTGTC+CGG + chr3_4:81159125-81159144 Msa0527000:intron 40.0%
ACTAGAAAGGTGATGCTAAC+CGG - chr3_4:81159155-81159174 None:intergenic 40.0%
CATAATTTGAGCTGTGAAGG+CGG - chr3_4:81159235-81159254 None:intergenic 40.0%
TGCCATAATTTGAGCTGTGA+AGG - chr3_4:81159238-81159257 None:intergenic 40.0%
TGTGGAAGAAAATCATGGGA+TGG + chr3_4:81159472-81159491 Msa0527000:CDS 40.0%
TTCTAACTTGGATGAGTGTG+AGG - chr3_4:81159585-81159604 None:intergenic 40.0%
AAAGGAATTAGGTCTTGCGT+GGG - chr3_4:81159611-81159630 None:intergenic 40.0%
!!! GAAACCCTGGCTTTTTTGAA+AGG - chr3_4:81159629-81159648 None:intergenic 40.0%
! TGGTGGATATATAGCTAGCT+AGG + chr3_4:81159830-81159849 Msa0527000:intron 40.0%
!! CCAACATAGTGATGGATTTG+AGG - chr3_4:81160513-81160532 None:intergenic 40.0%
CCTCAAATCCATCACTATGT+TGG + chr3_4:81160510-81160529 Msa0527000:intron 40.0%
AACCATTTCGTAAGGTAGTG+AGG + chr3_4:81160619-81160638 Msa0527000:intron 40.0%
TTCCTCACTACCTTACGAAA+TGG - chr3_4:81160624-81160643 None:intergenic 40.0%
GTGCACTATGTTTCTTGAAC+AGG + chr3_4:81161415-81161434 Msa0527000:intron 40.0%
! TGCCGATATTGTGTTTGCTA+TGG - chr3_4:81161525-81161544 None:intergenic 40.0%
ACACTTAGAAAGGAATCAGC+CGG + chr3_4:81161581-81161600 Msa0527000:CDS 40.0%
GGTACTTGACATTGTTGCAT+AGG - chr3_4:81161627-81161646 None:intergenic 40.0%
!!! ATGGTTTTGTGTCAAGTCGA+GGG - chr3_4:81161681-81161700 None:intergenic 40.0%
!!! TATGGTTTTGTGTCAAGTCG+AGG - chr3_4:81161682-81161701 None:intergenic 40.0%
! ATTTGAAATGGTAGAGGAGG+AGG - chr3_4:81161719-81161738 None:intergenic 40.0%
! TGCATTTGAAATGGTAGAGG+AGG - chr3_4:81161722-81161741 None:intergenic 40.0%
TGCGGATGTTGCATTTGAAA+TGG - chr3_4:81161731-81161750 None:intergenic 40.0%
AGCTTCTGTGAGAAGAACAA+TGG - chr3_4:81161770-81161789 None:intergenic 40.0%
CTACCACCATTACTTCAACT+AGG + chr3_4:81161788-81161807 Msa0527000:CDS 40.0%
ACACTCTCAACCATAGATGA+AGG - chr3_4:81161824-81161843 None:intergenic 40.0%
TGTTAGTGCAGCCATTTCTT+CGG + chr3_4:81161841-81161860 Msa0527000:CDS 40.0%
GCAGCGATTTCATCAATCAT+TGG + chr3_4:81161890-81161909 Msa0527000:CDS 40.0%
TCAATCATTGGAGCACAAAG+AGG + chr3_4:81161902-81161921 Msa0527000:CDS 40.0%
GAGAATGTAGTGCATGATTG+AGG - chr3_4:81161983-81162002 None:intergenic 40.0%
!! ATAATTCACAGTGGTGGTGG+TGG - chr3_4:81156957-81156976 None:intergenic 45.0%
AGGATAATTCACAGTGGTGG+TGG - chr3_4:81156960-81156979 None:intergenic 45.0%
CATGGCAGCATCATCAAAGA+AGG + chr3_4:81157096-81157115 Msa0527000:CDS 45.0%
TAACAGGATCATGCTGAGTG+AGG - chr3_4:81157137-81157156 None:intergenic 45.0%
ACAAAAACCAGACCATGGTC+AGG + chr3_4:81157575-81157594 Msa0527000:CDS 45.0%
CAAACATACACACCTGACCA+TGG - chr3_4:81157590-81157609 None:intergenic 45.0%
AATGTTAACCAGTACCCTCG+AGG + chr3_4:81157996-81158015 Msa0527000:intron 45.0%
AGTTCCTTAACTAGTGCTCC+GGG + chr3_4:81158160-81158179 Msa0527000:intron 45.0%
! TAGTTCGGTTCGAATCGGTT+CGG + chr3_4:81158355-81158374 Msa0527000:intron 45.0%
! AAAGCGTTAACTAGTGTCCG+GGG - chr3_4:81158779-81158798 None:intergenic 45.0%
!! ATTCTTAAAAGAGTGCCCCG+GGG + chr3_4:81158889-81158908 Msa0527000:intron 45.0%
AGTATGTTTAACCAGTGCCC+GGG - chr3_4:81159008-81159027 None:intergenic 45.0%
GTTATGCTTAACCAGTGTCC+GGG + chr3_4:81159126-81159145 Msa0527000:intron 45.0%
TTATGCTTAACCAGTGTCCG+GGG + chr3_4:81159127-81159146 Msa0527000:intron 45.0%
CGCCTTCACAGCTCAAATTA+TGG + chr3_4:81159233-81159252 Msa0527000:intron 45.0%
! ATTGGTTTCGGATGGAAAGC+AGG + chr3_4:81159526-81159545 Msa0527000:CDS 45.0%
GAATCTTCTGCAGGATGATC+AGG - chr3_4:81159563-81159582 None:intergenic 45.0%
TTGCGTGGGTTCTTCTAACT+TGG - chr3_4:81159597-81159616 None:intergenic 45.0%
GAAAGGAATTAGGTCTTGCG+TGG - chr3_4:81159612-81159631 None:intergenic 45.0%
AGCTTCTGATCTTGCACGTA+TGG - chr3_4:81159651-81159670 None:intergenic 45.0%
GGATATATAGCTAGCTAGGC+CGG + chr3_4:81159834-81159853 Msa0527000:intron 45.0%
GGATGTCAGTGGAGGAAATA+TGG + chr3_4:81159943-81159962 Msa0527000:CDS 45.0%
TGCCTACTATCGTTGCACTA+TGG + chr3_4:81159999-81160018 Msa0527000:CDS 45.0%
AGCCATAGTGCAACGATAGT+AGG - chr3_4:81160004-81160023 None:intergenic 45.0%
TATCGTTGCACTATGGCTGT+AGG + chr3_4:81160006-81160025 Msa0527000:CDS 45.0%
TCCATCACTATGTTGGTGTG+TGG + chr3_4:81160517-81160536 Msa0527000:intron 45.0%
TCCACACACCAACATAGTGA+TGG - chr3_4:81160521-81160540 None:intergenic 45.0%
TGGCATCAGAGCCTATCAAT+CGG - chr3_4:81160561-81160580 None:intergenic 45.0%
GAAGGGTTGAGAAGCTGATA+GGG - chr3_4:81161648-81161667 None:intergenic 45.0%
TCAAGTCGAGGGTGATTGTT+GGG - chr3_4:81161670-81161689 None:intergenic 45.0%
ATGCAACATCCGCAACTACT+AGG + chr3_4:81161737-81161756 Msa0527000:CDS 45.0%
TGCAACATCCGCAACTACTA+GGG + chr3_4:81161738-81161757 Msa0527000:CDS 45.0%
GGATTAACCCCTAGTAGTTG+CGG - chr3_4:81161749-81161768 None:intergenic 45.0%
TGCCCTAGTTGAAGTAATGG+TGG - chr3_4:81161794-81161813 None:intergenic 45.0%
GGTTGCCCTAGTTGAAGTAA+TGG - chr3_4:81161797-81161816 None:intergenic 45.0%
TCAACCATAGATGAAGGTGG+TGG - chr3_4:81161818-81161837 None:intergenic 45.0%
CTCTCAACCATAGATGAAGG+TGG - chr3_4:81161821-81161840 None:intergenic 45.0%
ATCATTGGAGCACAAAGAGG+TGG + chr3_4:81161905-81161924 Msa0527000:CDS 45.0%
!!! TACATATTTAATTTATATTT+TGG + chr3_4:81157183-81157202 Msa0527000:intron 5.0%
!!! CATTTTTATTAATTTTTTTT+AGG + chr3_4:81157925-81157944 Msa0527000:intron 5.0%
!!! TTTTTATTAATTTTTTTTAG+GGG + chr3_4:81157927-81157946 Msa0527000:intron 5.0%
!!! TATTATTTTAAACATATTAT+AGG - chr3_4:81158274-81158293 None:intergenic 5.0%
!!! TAATTAACTTTTTTTTTTTA+AGG - chr3_4:81158592-81158611 None:intergenic 5.0%
!!! TATAAAATAATTTTTTCTTT+TGG + chr3_4:81158865-81158884 Msa0527000:intron 5.0%
!!! ACTTTTAATAAAAAATAAAA+TGG - chr3_4:81159182-81159201 None:intergenic 5.0%
!!! TAAAAAATTCTAATTTTTTT+TGG - chr3_4:81160953-81160972 None:intergenic 5.0%
TGCTGAGTGAGGAGTAGTGT+TGG - chr3_4:81157126-81157145 None:intergenic 50.0%
ATACACACCTGACCATGGTC+TGG - chr3_4:81157585-81157604 None:intergenic 50.0%
TTCCTTAACCAGTGCCTCGA+GGG - chr3_4:81158013-81158032 None:intergenic 50.0%
ATTCCTTAACCAGTGCCTCG+AGG - chr3_4:81158014-81158033 None:intergenic 50.0%
GTTCCTTAACTAGTGCTCCG+GGG + chr3_4:81158161-81158180 Msa0527000:intron 50.0%
TTCCTTAACTAGTGCTCCGG+GGG + chr3_4:81158162-81158181 Msa0527000:intron 50.0%
GAAATGTTAACCGGTGTCCC+CGG + chr3_4:81158759-81158778 Msa0527000:intron 50.0%
!! TTCTTAAAAGAGTGCCCCGG+GGG + chr3_4:81158890-81158909 Msa0527000:intron 50.0%
GGAAATATTAACCGGTGCCC+CGG + chr3_4:81158987-81159006 Msa0527000:intron 50.0%
GAAATATTAACCGGTGCCCC+GGG + chr3_4:81158988-81159007 Msa0527000:intron 50.0%
GTATGTTTAACCAGTGCCCG+GGG - chr3_4:81159007-81159026 None:intergenic 50.0%
TCTTCTGCAGGATGATCAGG+AGG - chr3_4:81159560-81159579 None:intergenic 50.0%
GAGTGTGAGGAATCTTCTGC+AGG - chr3_4:81159572-81159591 None:intergenic 50.0%
TCTTGCACGTATGGAAACCC+TGG - chr3_4:81159642-81159661 None:intergenic 50.0%
TGGTGAGGCCTAAGCTATTC+TGG + chr3_4:81159779-81159798 Msa0527000:intron 50.0%
TCCACATTCATGCATGTGGC+CGG - chr3_4:81159856-81159875 None:intergenic 50.0%
AGATCAGCGATGGATGTCAG+TGG + chr3_4:81159932-81159951 Msa0527000:intron 50.0%
GATAGTAGGCACGAGGACAA+GGG - chr3_4:81159990-81160009 None:intergenic 50.0%
CGGTATGTAGGCCGATTGAT+AGG + chr3_4:81160547-81160566 Msa0527000:intron 50.0%
! TTTGCTATGGCAGTTGCAGC+TGG - chr3_4:81161512-81161531 None:intergenic 50.0%
GGAAGGGTTGAGAAGCTGAT+AGG - chr3_4:81161649-81161668 None:intergenic 50.0%
TCGAGGGTGATTGTTGGGAA+GGG - chr3_4:81161665-81161684 None:intergenic 50.0%
GTCAAGTCGAGGGTGATTGT+TGG - chr3_4:81161671-81161690 None:intergenic 50.0%
! GAGGAACTCTGGAGAGGTTA+TGG - chr3_4:81161700-81161719 None:intergenic 50.0%
GCAACATCCGCAACTACTAG+GGG + chr3_4:81161739-81161758 Msa0527000:CDS 50.0%
GCAACCACCACCTTCATCTA+TGG + chr3_4:81161811-81161830 Msa0527000:CDS 50.0%
GTGCATGATTGAGGAAGCTG+AGG - chr3_4:81161974-81161993 None:intergenic 50.0%
!! ATTCACAGTGGTGGTGGTGG+TGG - chr3_4:81156954-81156973 None:intergenic 55.0%
GTTGTTGTGGAGGAAGTCGC+CGG - chr3_4:81156995-81157014 None:intergenic 55.0%
!! TACCCTCGAGGCACTGGTTA+AGG + chr3_4:81158008-81158027 Msa0527000:intron 55.0%
TAACTAGTGTCCGGGGACAC+CGG - chr3_4:81158772-81158791 None:intergenic 55.0%
TCTTGTTAACGAGTGCCCCC+GGG - chr3_4:81158908-81158927 None:intergenic 55.0%
! GTCTTGTTAACGAGTGCCCC+CGG - chr3_4:81158909-81158928 None:intergenic 55.0%
CTGCAGGATGATCAGGAGGA+GGG - chr3_4:81159556-81159575 None:intergenic 55.0%
TCTGCAGGATGATCAGGAGG+AGG - chr3_4:81159557-81159576 None:intergenic 55.0%
TGCAAGATCAGAAGCTCCCC+TGG + chr3_4:81159655-81159674 Msa0527000:CDS 55.0%
TCAGCGATGGATGTCAGTGG+AGG + chr3_4:81159935-81159954 Msa0527000:CDS 55.0%
ACGAGGACAAGGGTTACCCT+TGG - chr3_4:81159980-81159999 None:intergenic 55.0%
CGATAGTAGGCACGAGGACA+AGG - chr3_4:81159991-81160010 None:intergenic 55.0%
GTGCAACGATAGTAGGCACG+AGG - chr3_4:81159997-81160016 None:intergenic 55.0%
AGGATGCCCAGTTCGCAAAC+AGG + chr3_4:81160026-81160045 Msa0527000:CDS 55.0%
CTATGGCAGTTGCAGCTGGT+GGG - chr3_4:81161508-81161527 None:intergenic 55.0%
GTCGAGGGTGATTGTTGGGA+AGG - chr3_4:81161666-81161685 None:intergenic 55.0%
TGGTAGAGGAGGAGGAACTC+TGG - chr3_4:81161711-81161730 None:intergenic 55.0%
GGAGCACAAAGAGGTGGTGA+TGG + chr3_4:81161911-81161930 Msa0527000:CDS 55.0%
CTTGCAGGTGTAGTTCCTGC+AGG + chr3_4:81161944-81161963 Msa0527000:CDS 55.0%
GTCGCCGGAGGAGCTTAAGA+AGG - chr3_4:81156980-81156999 None:intergenic 60.0%
AACCAGTACCCTCGAGGCAC+TGG + chr3_4:81158002-81158021 Msa0527000:intron 60.0%
! AACCAGTGCCTCGAGGGTAC+TGG - chr3_4:81158007-81158026 None:intergenic 60.0%
! TGCCCCCGGAGCACTAGTTA+AGG - chr3_4:81158167-81158186 None:intergenic 60.0%
! GTCTTGTTAACCGGTGCCCC+CGG - chr3_4:81158181-81158200 None:intergenic 60.0%
CTTGTTAACGAGTGCCCCCG+GGG - chr3_4:81158907-81158926 None:intergenic 60.0%
TTAACCAGTGTCCGGGGCAC+CGG + chr3_4:81159133-81159152 Msa0527000:intron 60.0%
GCCGGCCACATGCATGAATG+TGG + chr3_4:81159852-81159871 Msa0527000:intron 60.0%
CAGTTGCAGCTGGTGGGAGT+GGG - chr3_4:81161502-81161521 None:intergenic 60.0%
GCTATGGCAGTTGCAGCTGG+TGG - chr3_4:81161509-81161528 None:intergenic 60.0%
! GAGGAGGAGGAACTCTGGAG+AGG - chr3_4:81161706-81161725 None:intergenic 60.0%
GGAAGCTGAGGTGAACCTGC+AGG - chr3_4:81161962-81161981 None:intergenic 60.0%
!! CACAGTGGTGGTGGTGGTGG+TGG - chr3_4:81156951-81156970 None:intergenic 65.0%
GTTGTGGAGGAAGTCGCCGG+AGG - chr3_4:81156992-81157011 None:intergenic 65.0%
! AACTAGTGCTCCGGGGGCAC+CGG + chr3_4:81158168-81158187 Msa0527000:intron 65.0%
TTAACCAGTGCCCGGGGCAC+CGG - chr3_4:81159001-81159020 None:intergenic 65.0%
GGTGATGCTAACCGGTGCCC+CGG - chr3_4:81159147-81159166 None:intergenic 65.0%
CTGGTGGGAGTGGGTGAGTG+TGG - chr3_4:81161493-81161512 None:intergenic 65.0%
GCAGTTGCAGCTGGTGGGAG+TGG - chr3_4:81161503-81161522 None:intergenic 65.0%
TTAACCGGTGCCCCGGGCAC+TGG + chr3_4:81158994-81159013 Msa0527000:intron 70.0%
CTAACCGGTGCCCCGGACAC+TGG - chr3_4:81159140-81159159 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 81156940 81162012 81156940 ID=Msa0527000;Name=Msa0527000
chr3_4 mRNA 81156940 81162012 81156940 ID=Msa0527000-mRNA-1;Parent=Msa0527000;Name=Msa0527000-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.2|0|1|1|1|6|0|444
chr3_4 exon 81156940 81157158 81156940 ID=Msa0527000-mRNA-1:exon:24453;Parent=Msa0527000-mRNA-1
chr3_4 exon 81157267 81157338 81157267 ID=Msa0527000-mRNA-1:exon:24454;Parent=Msa0527000-mRNA-1
chr3_4 exon 81157450 81157596 81157450 ID=Msa0527000-mRNA-1:exon:24455;Parent=Msa0527000-mRNA-1
chr3_4 exon 81159470 81159676 81159470 ID=Msa0527000-mRNA-1:exon:24456;Parent=Msa0527000-mRNA-1
chr3_4 exon 81159934 81160047 81159934 ID=Msa0527000-mRNA-1:exon:24457;Parent=Msa0527000-mRNA-1
chr3_4 exon 81161437 81162012 81161437 ID=Msa0527000-mRNA-1:exon:24458;Parent=Msa0527000-mRNA-1
chr3_4 CDS 81156940 81157158 81156940 ID=Msa0527000-mRNA-1:cds;Parent=Msa0527000-mRNA-1
chr3_4 CDS 81157267 81157338 81157267 ID=Msa0527000-mRNA-1:cds;Parent=Msa0527000-mRNA-1
chr3_4 CDS 81157450 81157596 81157450 ID=Msa0527000-mRNA-1:cds;Parent=Msa0527000-mRNA-1
chr3_4 CDS 81159470 81159676 81159470 ID=Msa0527000-mRNA-1:cds;Parent=Msa0527000-mRNA-1
chr3_4 CDS 81159934 81160047 81159934 ID=Msa0527000-mRNA-1:cds;Parent=Msa0527000-mRNA-1
chr3_4 CDS 81161437 81162012 81161437 ID=Msa0527000-mRNA-1:cds;Parent=Msa0527000-mRNA-1
Gene Sequence

>Msa0527000

ATGGAAAACCACCACCACCACCACCACTGTGAATTATCCTTCTTAAGCTCCTCCGGCGACTTCCTCCACAACAACAGTATAGATCCTCCGATCAAAGAAATGGATTTCTTCTCATCATCACCTAATAAAAACAACAAAGAAGATGATCAAGATCAACATGGCAGCATCATCAAAGAAGGATCACCAACACTACTCCTCACTCAGCATGATCCTGTTAACACTGGACTGAATTTAACGTGTTCAAGTGCTGCAGTTTCAAAAGAAAAAAATCTTGAAAATTCTGAAACTGAGATGAGTATGCTTGAAAGTGAATTGAGGAGGGTGCAAGAAGAGAATCATAAATTGAGAATTATGTTAGAACAAATTACCAAAAGCTATAGCCAACTACAAGCTCAGTTGTTCATCACTTTGCAGAAACAAAAACCAGACCATGGTCAGAATGTGGAAGAAAATCATGGGATGGTATCAGAACAAATTTTTTTGAATAATAATGCATTGGTTTCGGATGGAAAGCAGGCTTGCCCTCCTCCTGATCATCCTGCAGAAGATTCCTCACACTCATCCAAGTTAGAAGAACCCACGCAAGACCTAATTCCTTTCAAAAAAGCCAGGGTTTCCATACGTGCAAGATCAGAAGCTCCCCTGATCAGCGATGGATGTCAGTGGAGGAAATATGGACAAAAAATGGCCAAGGGTAACCCTTGTCCTCGTGCCTACTATCGTTGCACTATGGCTGTAGGATGCCCAGTTCGCAAACAGGTTCAAAGATGTGCAGAAGACAAGACAATACTAATAACAACATACGAAGGCAACCACACTCACCCACTCCCACCAGCTGCAACTGCCATAGCAAACACAATATCGGCAGCTGCAGCAATGCTGCTATCAACTTCAACCTCATCAACACTTAGAAAGGAATCAGCCGGATATTTATCTAATTCATTTCCCTATGCAACAATGTCAAGTACCCTATCAGCTTCTCAACCCTTCCCAACAATCACCCTCGACTTGACACAAAACCATAACCTCTCCAGAGTTCCTCCTCCTCTACCATTTCAAATGCAACATCCGCAACTACTAGGGGTTAATCCATTGTTCTTCTCACAGAAGCTACCACCATTACTTCAACTAGGGCAACCACCACCTTCATCTATGGTTGAGAGTGTTAGTGCAGCCATTTCTTCGGATCCAAATTTTACTACAGCTTTGGCCGCAGCGATTTCATCAATCATTGGAGCACAAAGAGGTGGTGATGGTAATAATAATCTTGCAGGTGTAGTTCCTGCAGGTTCACCTCAGCTTCCTCAATCATGCACTACATTCTCTACTAATTAG
Protein sequence

>Msa0527000

MENHHHHHHCELSFLSSSGDFLHNNSIDPPIKEMDFFSSSPNKNNKEDDQDQHGSIIKEGSPTLLLTQHDPVNTGLNLTCSSAAVSKEKNLENSETEMSMLESELRRVQEENHKLRIMLEQITKSYSQLQAQLFITLQKQKPDHGQNVEENHGMVSEQIFLNNNALVSDGKQACPPPDHPAEDSSHSSKLEEPTQDLIPFKKARVSIRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGNHTHPLPPAATAIANTISAAAAMLLSTSTSSTLRKESAGYLSNSFPYATMSSTLSASQPFPTITLDLTQNHNLSRVPPPLPFQMQHPQLLGVNPLFFSQKLPPLLQLGQPPPSSMVESVSAAISSDPNFTTALAAAISSIIGAQRGGDGNNNLAGVVPAGSPQLPQSCTTFSTN*