AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0535800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0535800 MtrunA17_Chr4g0009751 91.626 621 14 1 1 583 1 621 0.0 1118
Msa0535800 MtrunA17_Chr7g0239061 66.270 673 159 11 18 628 13 679 0.0 823
Msa0535800 MtrunA17_Chr8g0346711 53.673 667 228 13 18 629 28 668 0.0 657
Msa0535800 MtrunA17_Chr2g0276781 49.329 671 259 15 3 619 4 647 0.0 583
Msa0535800 MtrunA17_Chr8g0385791 57.487 374 113 6 19 348 59 430 4.15e-134 412
Msa0535800 MtrunA17_Chr8g0385791 34.685 222 119 6 414 618 597 809 8.67e-28 119
Msa0535800 MtrunA17_Chr4g0046371 41.204 432 185 9 19 392 38 458 1.75e-97 313
Msa0535800 MtrunA17_Chr2g0285461 46.978 364 141 8 17 334 21 378 2.57e-94 310
Msa0535800 MtrunA17_Chr2g0285461 28.421 190 114 7 428 604 683 863 3.85e-14 76.3
Msa0535800 MtrunA17_Chr2g0282961 37.961 461 219 7 19 419 53 506 1.50e-93 300
Msa0535800 MtrunA17_Chr8g0376771 46.667 360 147 6 17 334 21 377 1.66e-93 308
Msa0535800 MtrunA17_Chr8g0376771 31.746 189 106 8 430 604 690 869 5.17e-15 79.0
Msa0535800 MtrunA17_Chr5g0433301 45.556 360 152 6 15 332 20 377 1.75e-93 306
Msa0535800 MtrunA17_Chr5g0433301 43.038 79 43 1 528 604 725 803 4.05e-15 79.3
Msa0535800 MtrunA17_Chr3g0109391 43.799 379 171 5 15 351 22 400 2.93e-93 306
Msa0535800 MtrunA17_Chr3g0109391 33.121 157 93 4 455 604 660 811 6.18e-16 81.6
Msa0535800 MtrunA17_Chr4g0029671 42.973 370 149 6 19 333 54 416 3.09e-93 304
Msa0535800 MtrunA17_Chr4g0029671 49.505 101 49 2 509 607 654 754 5.31e-23 104
Msa0535800 MtrunA17_Chr2g0326281 48.701 308 131 4 19 300 56 362 1.95e-92 303
Msa0535800 MtrunA17_Chr2g0326281 51.087 92 44 1 517 607 695 786 1.93e-22 102
Msa0535800 MtrunA17_Chr1g0156321 51.370 292 130 5 17 300 41 328 7.39e-87 289
Msa0535800 MtrunA17_Chr1g0156321 41.441 111 59 4 512 617 747 856 6.07e-16 81.6
Msa0535800 MtrunA17_Chr2g0301251 50.174 287 138 3 17 299 21 306 9.62e-80 273
Msa0535800 MtrunA17_Chr2g0301251 40.678 118 61 4 509 620 980 1094 9.23e-18 87.8
Msa0535800 MtrunA17_Chr4g0070181 50.871 287 136 3 17 299 21 306 6.13e-79 271
Msa0535800 MtrunA17_Chr4g0070181 44.000 100 51 3 507 604 986 1082 2.96e-18 89.4
Msa0535800 MtrunA17_Chr8g0389081 49.485 291 142 4 14 299 27 317 1.17e-78 270
Msa0535800 MtrunA17_Chr8g0389081 48.889 90 43 2 517 604 985 1073 1.68e-18 90.1
Msa0535800 MtrunA17_Chr2g0326761 30.846 697 342 26 17 609 9 669 5.50e-66 229
Msa0535800 MtrunA17_Chr1g0181211 28.447 689 369 19 9 595 17 683 1.27e-64 225
Msa0535800 MtrunA17_Chr4g0028971 39.521 334 146 8 14 299 7 332 1.62e-57 206
Msa0535800 MtrunA17_Chr1g0199681 38.462 351 156 11 15 323 90 422 9.13e-57 204
Msa0535800 MtrunA17_Chr7g0264161 40.426 282 148 6 28 299 1 272 3.03e-54 187
Msa0535800 MtrunA17_Chr3g0115271 37.578 322 158 7 17 301 17 332 1.67e-53 192
Msa0535800 MtrunA17_Chr7g0264171 33.333 417 173 12 17 340 29 433 2.17e-53 193
Msa0535800 MtrunA17_Chr5g0424931 35.599 309 168 7 19 301 19 322 2.41e-48 177
Msa0535800 MtrunA17_Chr5g0417281 34.983 303 169 8 17 309 9 293 5.97e-47 173
Msa0535800 MtrunA17_Chr5g0436761 33.447 293 175 6 17 300 10 291 1.60e-44 165
Msa0535800 MtrunA17_Chr8g0356211 34.959 246 121 4 129 335 2 247 1.84e-42 155
Msa0535800 MtrunA17_Chr5g0417211 31.908 304 179 8 17 309 10 296 1.99e-42 158
Msa0535800 MtrunA17_Chr1g0178011 32.534 292 181 5 15 298 8 291 2.24e-42 159
Msa0535800 MtrunA17_Chr2g0289221 33.219 292 171 10 19 300 20 297 3.83e-40 150
Msa0535800 MtrunA17_Chr5g0425661 36.735 196 112 3 19 209 37 225 1.58e-35 134
Msa0535800 MtrunA17_Chr2g0277531 29.758 289 170 10 19 292 20 290 2.53e-32 127
Msa0535800 MtrunA17_Chr5g0424741 30.189 318 187 8 17 303 10 323 2.65e-32 131
Msa0535800 MtrunA17_Chr2g0277461 29.391 279 189 5 19 292 13 288 1.25e-31 128
Msa0535800 MtrunA17_Chr5g0424801 28.669 293 195 6 17 306 10 291 3.46e-31 125
Msa0535800 MtrunA17_Chr5g0425261 28.328 293 196 6 17 306 10 291 8.58e-29 118
Msa0535800 MtrunA17_Chr4g0009741 100.000 41 0 0 589 629 1 41 8.69e-20 82.8
Msa0535800 MtrunA17_Chr8g0340731 30.631 111 55 1 521 609 159 269 2.98e-12 67.4
Msa0535800 MtrunA17_Chr1g0156301 36.697 109 51 4 512 617 170 263 1.04e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0535800 AT4G23980.1 56.447 636 204 12 18 610 11 616 0.0 647
Msa0535800 AT4G23980.2 56.447 636 202 13 18 610 11 614 0.0 642
Msa0535800 AT2G46530.3 50.906 662 214 11 8 629 28 618 0.0 598
Msa0535800 AT2G46530.1 50.825 667 214 13 6 629 2 597 0.0 594
Msa0535800 AT3G61830.1 50.621 644 192 10 19 617 25 587 0.0 588
Msa0535800 AT1G59750.1 46.429 644 278 11 19 617 22 643 0.0 552
Msa0535800 AT1G59750.3 46.429 644 278 11 19 617 22 643 0.0 552
Msa0535800 AT1G59750.4 46.656 643 273 11 19 617 22 638 0.0 551
Msa0535800 AT1G59750.2 46.656 643 275 10 19 617 22 640 0.0 551
Msa0535800 AT3G61830.2 49.757 617 184 10 46 617 1 536 0.0 545
Msa0535800 AT1G35540.1 43.231 650 269 13 7 610 8 603 2.84e-172 504
Msa0535800 AT1G35240.1 42.835 642 254 12 7 602 8 582 5.35e-168 492
Msa0535800 AT1G34310.1 44.322 634 256 14 7 595 8 589 6.58e-168 492
Msa0535800 AT1G34410.1 44.320 625 254 13 18 602 26 596 1.73e-166 489
Msa0535800 AT1G34390.1 44.882 635 249 14 7 595 8 587 1.36e-165 486
Msa0535800 AT1G35520.1 43.150 635 262 12 7 595 8 589 3.16e-163 480
Msa0535800 AT2G46530.2 48.180 577 190 12 91 629 5 510 3.36e-160 469
Msa0535800 AT5G62000.2 58.659 358 100 6 19 333 61 413 1.30e-137 423
Msa0535800 AT5G62000.2 39.785 186 104 4 441 622 655 836 1.90e-32 134
Msa0535800 AT5G62000.5 58.659 358 100 6 19 333 61 413 1.30e-137 423
Msa0535800 AT5G62000.5 39.785 186 104 4 441 622 655 836 1.90e-32 134
Msa0535800 AT5G62000.3 58.659 358 100 6 19 333 61 413 1.30e-137 423
Msa0535800 AT5G62000.3 39.785 186 104 4 441 622 655 836 1.90e-32 134
Msa0535800 AT5G62000.1 58.659 358 100 6 19 333 61 413 1.30e-137 423
Msa0535800 AT5G62000.1 39.785 186 104 4 441 622 655 836 1.90e-32 134
Msa0535800 AT5G62000.4 58.659 358 100 6 19 333 61 413 1.98e-137 422
Msa0535800 AT5G62000.4 40.698 172 97 3 441 608 655 825 4.36e-32 133
Msa0535800 AT1G34170.1 38.589 482 220 9 18 457 24 471 1.09e-103 324
Msa0535800 AT2G33860.1 43.008 379 160 6 12 341 47 418 1.05e-93 301
Msa0535800 AT5G37020.2 43.272 379 173 5 15 351 18 396 1.86e-92 302
Msa0535800 AT5G37020.1 43.272 379 173 5 15 351 18 396 3.97e-92 302
Msa0535800 AT5G37020.1 41.837 98 50 3 513 604 697 793 8.46e-14 75.5
Msa0535800 AT1G30330.1 44.103 390 157 10 17 352 21 403 6.09e-91 301
Msa0535800 AT1G30330.1 30.256 195 115 8 428 610 704 889 2.20e-14 77.4
Msa0535800 AT1G34170.2 38.562 459 226 11 18 457 24 445 6.28e-91 290
Msa0535800 AT1G30330.3 44.103 390 157 10 17 352 23 405 6.90e-91 301
Msa0535800 AT1G30330.3 30.256 195 115 8 428 610 706 891 2.09e-14 77.4
Msa0535800 AT1G30330.2 44.103 390 157 10 17 352 23 405 6.90e-91 301
Msa0535800 AT1G30330.2 30.256 195 115 8 428 610 706 891 2.09e-14 77.4
Msa0535800 AT1G34170.3 38.723 470 232 14 18 466 24 458 1.42e-90 291
Msa0535800 AT1G34170.3 65.934 91 31 0 520 610 436 526 2.75e-34 137
Msa0535800 AT5G60450.2 43.681 364 151 8 19 332 41 400 1.67e-89 294
Msa0535800 AT5G60450.2 42.500 120 60 3 504 622 632 743 7.90e-23 103
Msa0535800 AT5G60450.1 43.681 364 151 8 19 332 65 424 3.09e-89 294
Msa0535800 AT5G60450.1 42.500 120 60 3 504 622 656 767 8.69e-23 103
Msa0535800 AT1G19850.2 49.827 289 140 4 17 300 41 329 9.36e-85 284
Msa0535800 AT1G19850.2 40.952 105 58 3 517 618 782 885 1.39e-15 81.3
Msa0535800 AT1G19850.1 49.827 289 140 4 17 300 52 340 1.01e-84 284
Msa0535800 AT1G19850.1 40.952 105 58 3 517 618 793 896 1.37e-15 81.3
Msa0535800 AT1G19220.1 50.000 284 139 2 17 297 21 304 1.76e-77 267
Msa0535800 AT1G19220.1 46.535 101 47 3 506 604 951 1046 1.21e-18 91.3
Msa0535800 AT1G43950.1 55.204 221 86 5 7 220 8 222 6.83e-77 244
Msa0535800 AT5G20730.2 44.248 339 149 4 17 315 22 360 1.10e-74 260
Msa0535800 AT5G20730.2 45.545 101 48 3 506 604 1030 1125 5.02e-18 89.4
Msa0535800 AT5G20730.3 44.118 340 149 4 17 315 22 361 2.14e-74 259
Msa0535800 AT5G20730.3 45.545 101 48 3 506 604 1031 1126 4.58e-18 89.4
Msa0535800 AT5G20730.1 44.118 340 149 4 17 315 22 361 2.42e-74 259
Msa0535800 AT5G20730.1 45.545 101 48 3 506 604 1031 1126 5.20e-18 89.0
Msa0535800 AT2G33860.2 45.385 260 103 3 121 341 2 261 1.81e-68 230
Msa0535800 AT5G37020.3 43.911 271 112 3 121 351 31 301 5.91e-63 221
Msa0535800 AT5G37020.3 41.837 98 50 3 513 604 602 698 7.47e-14 75.5
Msa0535800 AT2G28350.2 36.250 400 161 12 17 330 8 399 3.19e-58 207
Msa0535800 AT2G28350.1 36.250 400 161 12 17 330 8 399 4.31e-58 207
Msa0535800 AT4G30080.1 38.110 328 147 7 17 299 17 333 1.19e-56 203
Msa0535800 AT1G77850.1 30.846 402 176 11 17 334 17 400 2.38e-44 167
Msa0535800 AT1G77850.2 30.846 402 176 11 17 334 17 400 2.40e-44 167
Msa0535800 AT5G25890.1 36.709 79 50 0 520 598 83 161 9.04e-13 67.4
Msa0535800 AT3G62100.1 39.506 81 43 1 521 595 86 166 1.06e-11 64.3
Msa0535800 AT2G46990.1 39.506 81 43 1 521 595 88 168 1.22e-11 64.3
Msa0535800 AT3G17600.1 40.506 79 43 2 520 595 75 152 2.11e-11 63.2
Msa0535800 AT2G33310.2 28.767 146 86 3 481 611 96 238 4.43e-11 63.9
Msa0535800 AT2G33310.3 28.767 146 86 3 481 611 95 237 4.67e-11 63.9
Msa0535800 AT2G33310.1 28.767 146 86 3 481 611 95 237 4.67e-11 63.9
Msa0535800 AT3G16500.2 30.000 120 63 2 503 601 134 253 7.69e-11 63.5
Msa0535800 AT3G16500.1 30.000 120 63 2 503 601 134 253 8.26e-11 63.5

Find 154 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAATAAATTTGTGGATA+TGG 0.147633 4_1:+12357170 Msa0535800:three_prime_UTR
AGTTCCTCGGTGGGCGGATC+CGG 0.247667 4_1:-12353934 None:intergenic
TTTATGTGTAGAGGGGAAAA+TGG 0.253271 4_1:+12354577 Msa0535800:intron
GGAAGAAAATTACCAGTAAA+TGG 0.257347 4_1:-12353648 None:intergenic
AATAATAACAAGAACAATAA+TGG 0.271663 4_1:-12352587 None:intergenic
CGCTTTAAGCATATATTTAG+AGG 0.283683 4_1:+12354214 Msa0535800:CDS
GCTACAACTTATCGATTGTT+TGG 0.287069 4_1:+12355873 Msa0535800:CDS
ATTTCATCTTCTTTACATCT+TGG 0.300664 4_1:-12356823 None:intergenic
CTACCGCTGCGAAGACTAAA+AGG 0.303545 4_1:+12355444 Msa0535800:CDS
TATCGTGAATATCCATTTAC+TGG 0.326852 4_1:+12353636 Msa0535800:CDS
TGATCAACTCATTGCTGAAT+TGG 0.329988 4_1:+12356302 Msa0535800:CDS
CTTCGAGATGTCAGACTTAC+GGG 0.345970 4_1:-12356018 None:intergenic
GTGGGCGGATCCGGGATTGT+AGG 0.348576 4_1:-12353925 None:intergenic
CACAGAATGCCTTCCTCCTT+TGG 0.355448 4_1:+12354047 Msa0535800:CDS
AGTTGGTCGCGCTGTGGATT+TGG 0.361409 4_1:+12356263 Msa0535800:CDS
ATGAAACGGCGTTAGTTGTT+TGG 0.368212 4_1:-12352421 None:intergenic
TCTTCGATCGAAGAAGATAT+TGG 0.368659 4_1:-12356860 None:intergenic
CCTCAATGTAGCGTTGTTGT+TGG 0.373103 4_1:-12355670 None:intergenic
CATCTTCTTTACATCTTGGC+TGG 0.377400 4_1:-12356819 None:intergenic
TTATGTGTAGAGGGGAAAAT+GGG 0.381771 4_1:+12354578 Msa0535800:intron
AGACAATTTCCCATGTATTC+CGG 0.386856 4_1:-12356359 None:intergenic
GATGATTGAGGCTGTGAAAC+AGG 0.388237 4_1:-12355792 None:intergenic
ACCAACACCAACTCAAGAAT+TGG 0.394604 4_1:+12354162 Msa0535800:CDS
AACAAGAAGAAACAATAGTT+TGG 0.401479 4_1:-12356973 None:intergenic
CCTCTGGTTCAGTTCTTGAT+TGG 0.406901 4_1:-12353575 None:intergenic
TTCTTGAGTTGGTGTTGGTT+GGG 0.410457 4_1:-12354158 None:intergenic
GTTCCTCGGTGGGCGGATCC+GGG 0.417545 4_1:-12353933 None:intergenic
TTGGTTGCCAAGGATCTTCA+TGG 0.421128 4_1:+12354181 Msa0535800:CDS
GTTGTTCTGATGAAGAATTA+TGG 0.422682 4_1:+12352926 Msa0535800:CDS
AGCTTCAACACCGGAATACA+TGG 0.429008 4_1:+12356349 Msa0535800:CDS
ATAATAACAAGAACAATAAT+GGG 0.435039 4_1:-12352586 None:intergenic
TGTTCACACTTACGATGAAC+TGG 0.437660 4_1:-12354849 None:intergenic
GAATTATGGAAGGCAATTGC+AGG 0.438225 4_1:+12352940 Msa0535800:CDS
GAGAAGAAGGAAATTAAAGT+TGG 0.441807 4_1:+12357011 Msa0535800:three_prime_UTR
TTTGCTATTCATAATACGTT+GGG 0.447583 4_1:-12355646 None:intergenic
TTGATTATCATGTTGAATCA+TGG 0.452812 4_1:+12352734 Msa0535800:exon
ATGAGAAGGATAGCTAGAAC+GGG 0.455999 4_1:-12355724 None:intergenic
AATAGTTCCTCACCAACATC+AGG 0.458856 4_1:-12355488 None:intergenic
TGCTTGTTCTGAGTCTCCTT+AGG 0.458886 4_1:-12356080 None:intergenic
CTGCAAGATCTTAACCGCTT+CGG 0.459457 4_1:+12353981 Msa0535800:CDS
GATGTAAAGAAGATGAAATC+AGG 0.463335 4_1:+12356827 Msa0535800:CDS
GGAAGAGCTGTTTGACATCA+AGG 0.465424 4_1:+12356323 Msa0535800:CDS
AGACGACAGCCAACTTCCTT+CGG 0.466817 4_1:-12355700 None:intergenic
CCTTCGAGATGTCAGACTTA+CGG 0.469458 4_1:-12356019 None:intergenic
CGCAGACACCTTCTTACCAC+TGG 0.478758 4_1:+12354348 Msa0535800:CDS
AACGTCCTTACATTAGATTC+TGG 0.478848 4_1:-12353805 None:intergenic
TTGGTGGATGTTCCTTGTGT+TGG 0.479844 4_1:+12352967 Msa0535800:CDS
ATACGACAAAGGATCTTTGT+AGG 0.481304 4_1:-12353616 None:intergenic
GCATCTTCACATGCAGTAAA+CGG 0.483596 4_1:+12355942 Msa0535800:CDS
ATTCTTGAGTTGGTGTTGGT+TGG 0.484282 4_1:-12354159 None:intergenic
TATGCATGATCAAGTTGATA+AGG 0.491594 4_1:+12355833 Msa0535800:CDS
AGTTTATGCTCAGATTACTT+TGG 0.493014 4_1:+12353780 Msa0535800:CDS
ATGGTGGCTTCTCTGTTCTC+AGG 0.493380 4_1:+12354016 Msa0535800:CDS
ATCAGTACTCGACAAGGTGC+TGG 0.494577 4_1:-12355991 None:intergenic
ACCAATTCTTGAGTTGGTGT+TGG 0.497654 4_1:-12354163 None:intergenic
AACGGCGTTAGTTGTTTGGT+TGG 0.499230 4_1:-12352417 None:intergenic
CTTCGAAAAGGTTCAAATGC+AGG 0.499632 4_1:+12356233 Msa0535800:intron
TCCTTAGGTGAAACTTGTTG+TGG 0.500349 4_1:-12356065 None:intergenic
ACCTGACAGGGTTTCACCAT+GGG 0.501381 4_1:+12355376 Msa0535800:intron
GCAAGCTGAGCCTACAATCC+CGG 0.501671 4_1:+12353915 Msa0535800:intron
TTGGCAACCAATTCTTGAGT+TGG 0.501783 4_1:-12354169 None:intergenic
TTCATAACCATGAAGATCCT+TGG 0.502872 4_1:-12354188 None:intergenic
GGCAATTGCAGGACCATTGG+TGG 0.505529 4_1:+12352951 Msa0535800:CDS
TAGCTACTACTACTAGTGGT+TGG 0.506037 4_1:+12352530 Msa0535800:five_prime_UTR
TACTCCATCCAGTGGTAAGA+AGG 0.509527 4_1:-12354356 None:intergenic
GAAGGCAATTGCAGGACCAT+TGG 0.510610 4_1:+12352948 Msa0535800:CDS
TGATTATCATGTTGAATCAT+GGG 0.510631 4_1:+12352735 Msa0535800:exon
GTGGATTTGGCAACGTTGAA+TGG 0.516630 4_1:+12356276 Msa0535800:CDS
GTTTCAACACAGGAATCCTC+TGG 0.517299 4_1:-12353591 None:intergenic
GTTAACGATACAACAGATGA+TGG 0.518917 4_1:+12355750 Msa0535800:CDS
GTAGAAGCTGAAGAAACAAA+TGG 0.520578 4_1:-12355407 None:intergenic
TCAAGGGACAGCTTCAACAC+CGG 0.522429 4_1:+12356340 Msa0535800:CDS
GGAATTTCACTGGTTGGTCG+AGG 0.523391 4_1:-12355467 None:intergenic
AGAGAAGCCACCATGTGTAC+TGG 0.524479 4_1:-12354007 None:intergenic
GTCAATAATAAGTTTGCTGT+TGG 0.532097 4_1:+12354886 Msa0535800:CDS
GAACTCCTAGGTGCATGCTC+TGG 0.532708 4_1:-12354669 None:intergenic
ATATCTTCTTCGATCGAAGA+AGG 0.533706 4_1:+12356863 Msa0535800:CDS
GAAGGAGATATGATGCTTGT+CGG 0.534280 4_1:+12356393 Msa0535800:CDS
GGAATCAAACCGAAGGAAGT+TGG 0.535907 4_1:+12355691 Msa0535800:CDS
ACCAACATCAGGAATTTCAC+TGG 0.536555 4_1:-12355477 None:intergenic
AACTCAAGAATTGGTTGCCA+AGG 0.538673 4_1:+12354171 Msa0535800:CDS
CCTAGCATCCCAGAAAATAG+AGG 0.540384 4_1:-12355604 None:intergenic
GGCCTCGGAAGTTCCTCGGT+GGG 0.542937 4_1:-12353943 None:intergenic
CAAATGCAGGGTGTTGCAGT+TGG 0.546569 4_1:+12356246 Msa0535800:CDS
AGGATCTTCATGGTTATGAA+TGG 0.547803 4_1:+12354191 Msa0535800:CDS
GGGTCAAATGTTTCTGCTGA+AGG 0.548772 4_1:+12352755 Msa0535800:CDS
AGGCAGTTGCAAGAACTCCT+AGG 0.549920 4_1:-12354681 None:intergenic
GAGTCTGTGTTGCAACAGCA+TGG 0.550859 4_1:-12354705 None:intergenic
AATGAGAAGGATAGCTAGAA+CGG 0.551009 4_1:-12355725 None:intergenic
CTCGGAAGTTCCTCGGTGGG+CGG 0.559150 4_1:-12353940 None:intergenic
ATTCTGCTGAGTCTGACAAA+AGG 0.561040 4_1:+12354941 Msa0535800:CDS
ACATCAGGAATTTCACTGGT+TGG 0.570004 4_1:-12355473 None:intergenic
TGAGAGGTTGAGAAATGAAA+CGG 0.571350 4_1:-12352435 None:intergenic
TTGGCATGAGGTTCAAGATG+AGG 0.571911 4_1:+12354905 Msa0535800:CDS
TTCGAAAAGGTTCAAATGCA+GGG 0.572275 4_1:+12356234 Msa0535800:intron
ATGGTAAGAGTGTCTCGGCT+TGG 0.573433 4_1:+12355769 Msa0535800:CDS
GGGAATTACGTGTTGGAGTG+AGG 0.575409 4_1:+12354599 Msa0535800:CDS
TCTTCGTTTGTTGTTGTGAG+AGG 0.576081 4_1:-12352451 None:intergenic
GACACCTTCTTACCACTGGA+TGG 0.576567 4_1:+12354352 Msa0535800:CDS
CTGTGTTGCAACAGCATGGG+AGG 0.580307 4_1:-12354701 None:intergenic
ACCACAACAAGTTTCACCTA+AGG 0.580393 4_1:+12356064 Msa0535800:CDS
TTCTGATGAAGAATTATGGA+AGG 0.582002 4_1:+12352930 Msa0535800:CDS
ACTTGTTCCATGTGTCCTTG+AGG 0.583543 4_1:-12353009 None:intergenic
TTGCTAGCTACTACTACTAG+TGG 0.590470 4_1:+12352526 Msa0535800:five_prime_UTR
TAAGGATATACTCACAGCCA+TGG 0.590819 4_1:-12356423 None:intergenic
TATGTGTAGAGGGGAAAATG+GGG 0.591812 4_1:+12354579 Msa0535800:intron
ACAAATGGTTCTATCTCCCA+TGG 0.594032 4_1:-12355392 None:intergenic
TGGCTAGAAATCACAGATGA+CGG 0.597136 4_1:-12354649 None:intergenic
AGTCTGTGTTGCAACAGCAT+GGG 0.600860 4_1:-12354704 None:intergenic
TATCAACTTGATCATGCATA+CGG 0.603445 4_1:-12355830 None:intergenic
ACCAGTGAAATTCCTGATGT+TGG 0.603941 4_1:+12355476 Msa0535800:CDS
GAAGAGCTGTTTGACATCAA+GGG 0.606306 4_1:+12356324 Msa0535800:CDS
AGATGATGGTAAGAGTGTCT+CGG 0.612385 4_1:+12355764 Msa0535800:CDS
ATAAGTTTGCTGTTGGCATG+AGG 0.613242 4_1:+12354893 Msa0535800:CDS
TGGCCTCGGAAGTTCCTCGG+TGG 0.613541 4_1:-12353944 None:intergenic
TTTGTAGGAAGTTTCAACAC+AGG 0.615028 4_1:-12353601 None:intergenic
GTATCGTTAACTAAATGAGA+AGG 0.619152 4_1:-12355738 None:intergenic
GACCTGACAGGGTTTCACCA+TGG 0.620116 4_1:+12355375 Msa0535800:intron
GAAAATGGGGAATTACGTGT+TGG 0.620944 4_1:+12354592 Msa0535800:CDS
CCAACAACAACGCTACATTG+AGG 0.623977 4_1:+12355670 Msa0535800:CDS
TCTCGAAGGCTTCTTTCGAG+AGG 0.628948 4_1:+12356033 Msa0535800:CDS
GATAGTATTAGTACCAAAGG+AGG 0.631219 4_1:-12354060 None:intergenic
ACACAACAAGGCATTAATTG+TGG 0.632606 4_1:+12357115 Msa0535800:three_prime_UTR
GTATTAGTACCAAAGGAGGA+AGG 0.632675 4_1:-12354056 None:intergenic
TCAAGTTGATAAGGAGAACA+AGG 0.634527 4_1:+12355842 Msa0535800:CDS
TGTTGCAGTTGGTCGCGCTG+TGG 0.636542 4_1:+12356257 Msa0535800:CDS
ATGTTCAGTATAGATGATTG+AGG 0.638451 4_1:-12355804 None:intergenic
TCGTTGTATATTATAAGCCG+AGG 0.638981 4_1:+12354731 Msa0535800:CDS
TGCTTGTCGGAGATGATCCA+TGG 0.641174 4_1:+12356406 Msa0535800:CDS
CGCCCACCGAGGAACTTCCG+AGG 0.644650 4_1:+12353941 Msa0535800:CDS
CAAAGGAGGAAGGCATTCTG+TGG 0.645104 4_1:-12354046 None:intergenic
CCAATCAAGAACTGAACCAG+AGG 0.645681 4_1:+12353575 Msa0535800:CDS
TCACATGCAGTAAACGGTAA+CGG 0.646088 4_1:+12355948 Msa0535800:CDS
CACAAAAGTACTCCATCCAG+TGG 0.646963 4_1:-12354364 None:intergenic
CCGTAAGTCTGACATCTCGA+AGG 0.649794 4_1:+12356019 Msa0535800:CDS
GTAGTAGCTAGCAACAAGAA+CGG 0.649909 4_1:-12352517 None:intergenic
GGTGCTGGAACTAATTTCAG+TGG 0.649945 4_1:-12355976 None:intergenic
CGCAGCGGTAGGTTGAACTG+TGG 0.651226 4_1:-12355432 None:intergenic
GGATATTCACGATACGACAA+AGG 0.653882 4_1:-12353627 None:intergenic
ACACAAGGAACATCCACCAA+TGG 0.660232 4_1:-12352964 None:intergenic
GCTTCAACACCGGAATACAT+GGG 0.666431 4_1:+12356350 Msa0535800:CDS
TCTAGCCAGAGCATGCACCT+AGG 0.669686 4_1:+12354664 Msa0535800:CDS
ATGTGTACTGGTATCCGAAG+CGG 0.679897 4_1:-12353995 None:intergenic
ACATTGAGGAATCAAACCGA+AGG 0.680828 4_1:+12355684 Msa0535800:CDS
GCTTCGGATACCAGTACACA+TGG 0.682283 4_1:+12353997 Msa0535800:CDS
AAAACACTTTGACCAACACA+AGG 0.684451 4_1:-12352979 None:intergenic
GGCAGTATCAGTACTCGACA+AGG 0.689537 4_1:-12355997 None:intergenic
ATTGTCTTCACTGATGACGA+AGG 0.692844 4_1:+12356375 Msa0535800:CDS
TTGTAGCAGAAGTCGCACCA+AGG 0.707202 4_1:+12356106 Msa0535800:CDS
GTGGTAAGAAGGTGTCTGCG+CGG 0.714918 4_1:-12354345 None:intergenic
TAATTTGTAGAGACACAACA+AGG 0.717440 4_1:+12357103 Msa0535800:three_prime_UTR
TGAGAAGGATAGCTAGAACG+GGG 0.733386 4_1:-12355723 None:intergenic
AATCCCGGATCCGCCCACCG+AGG 0.756569 4_1:+12353930 Msa0535800:CDS
TCGGATACCAGTACACATGG+TGG 0.757397 4_1:+12354000 Msa0535800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTTTTTTTTTTTTTG+TGG + chr4_1:12352889-12352908 Msa0535800:intron 10.0%
!! ATATAATCAAAAGTTTAATA+TGG - chr4_1:12356488-12356507 None:intergenic 10.0%
!!! TTAAAAGAAAAAAACTATTT+TGG - chr4_1:12357150-12357169 None:intergenic 10.0%
!!! TTTTAACTTAAATAAATTTG+TGG + chr4_1:12357164-12357183 Msa0535800:three_prime_UTR 10.0%
!! ATAATAACAAGAACAATAAT+GGG - chr4_1:12352589-12352608 None:intergenic 15.0%
!! AATAATAACAAGAACAATAA+TGG - chr4_1:12352590-12352609 None:intergenic 15.0%
!!! CTGATTTTTATTTATTTGTT+TGG + chr4_1:12352808-12352827 Msa0535800:intron 15.0%
!!! TTTTTCTTTTTTTGGTTTTT+TGG + chr4_1:12352847-12352866 Msa0535800:intron 15.0%
!!! ATTAGTTTATTACTTATCTT+TGG + chr4_1:12354116-12354135 Msa0535800:intron 15.0%
!!! TTATCTTTGGAATTTTTTTT+AGG + chr4_1:12354129-12354148 Msa0535800:intron 15.0%
!!! TAATAAAATTTTATGTGTAG+AGG + chr4_1:12354568-12354587 Msa0535800:intron 15.0%
!!! AATAAAATTTTATGTGTAGA+GGG + chr4_1:12354569-12354588 Msa0535800:intron 15.0%
!! ACTAAATCAATATAAGAAAT+GGG - chr4_1:12355527-12355546 None:intergenic 15.0%
!! AACTAAATCAATATAAGAAA+TGG - chr4_1:12355528-12355547 None:intergenic 15.0%
!! GTTTAAAAATAACATATAGA+AGG - chr4_1:12355566-12355585 None:intergenic 15.0%
!! TTCTTATTGAACTATAATAA+TGG - chr4_1:12356176-12356195 None:intergenic 15.0%
!! AAACAAAAAGAAAGATAAAA+AGG - chr4_1:12356946-12356965 None:intergenic 15.0%
!!! GTTAATGGTTTTTCTTTTTT+TGG + chr4_1:12352839-12352858 Msa0535800:intron 20.0%
!!! ACTATATGTAATTTTGCTAA+AGG + chr4_1:12353054-12353073 Msa0535800:intron 20.0%
!! GTGTAAAAAACAAAAATCTT+TGG + chr4_1:12353410-12353429 Msa0535800:intron 20.0%
!! ATTTACTGCTAAAAATAGAA+AGG - chr4_1:12353474-12353493 None:intergenic 20.0%
!! CAAATGATACTTTGATTATT+AGG - chr4_1:12353672-12353691 None:intergenic 20.0%
!!! CTAATAATCAAAGTATCATT+TGG + chr4_1:12353670-12353689 Msa0535800:intron 20.0%
!! TATAGTTTCTAATTATAGCT+TGG + chr4_1:12353697-12353716 Msa0535800:intron 20.0%
!!! AAAAGTACAGAAAATCAAAA+GGG - chr4_1:12353836-12353855 None:intergenic 20.0%
!!! TAAAAGTACAGAAAATCAAA+AGG - chr4_1:12353837-12353856 None:intergenic 20.0%
!!! ATAAAATTTTATGTGTAGAG+GGG + chr4_1:12354570-12354589 Msa0535800:intron 20.0%
!! TATTAGAATAGCTACAAATA+AGG - chr4_1:12354995-12355014 None:intergenic 20.0%
!! TATATCATATATTAGTGATC+TGG + chr4_1:12356503-12356522 Msa0535800:intron 20.0%
!!! TAACATAAGTTACTCATTTT+AGG - chr4_1:12356533-12356552 None:intergenic 20.0%
!! GGTATTAATGATAAAATCAA+GGG - chr4_1:12356640-12356659 None:intergenic 20.0%
!! CTTAAATAAATTTGTGGATA+TGG + chr4_1:12357170-12357189 Msa0535800:three_prime_UTR 20.0%
!!! TCTTGTTATTCTCTTTTGAT+TGG + chr4_1:12352666-12352685 Msa0535800:five_prime_UTR 25.0%
! TTGATTATCATGTTGAATCA+TGG + chr4_1:12352734-12352753 Msa0535800:exon 25.0%
! TGATTATCATGTTGAATCAT+GGG + chr4_1:12352735-12352754 Msa0535800:exon 25.0%
!!! TGTTTGGTTTTTTGTGTTAA+TGG + chr4_1:12352824-12352843 Msa0535800:intron 25.0%
! GCAAAATTACATATAGTGAA+AGG - chr4_1:12353051-12353070 None:intergenic 25.0%
! TAGCTGATACAAAAACAATT+AGG + chr4_1:12353384-12353403 Msa0535800:intron 25.0%
! AGCTGATACAAAAACAATTA+GGG + chr4_1:12353385-12353404 Msa0535800:intron 25.0%
! AACAAAAATCTTTGGTATCA+CGG + chr4_1:12353418-12353437 Msa0535800:intron 25.0%
!!! AGCAGTAAATTAGAGTTTTT+TGG + chr4_1:12353484-12353503 Msa0535800:intron 25.0%
! CTAAAACATAGCAAAATTCA+AGG - chr4_1:12353740-12353759 None:intergenic 25.0%
!!! CTTGAATTTTGCTATGTTTT+AGG + chr4_1:12353738-12353757 Msa0535800:intron 25.0%
! AAAGTACAGAAAATCAAAAG+GGG - chr4_1:12353835-12353854 None:intergenic 25.0%
! TCCATTAGAATCTAAACAAT+GGG - chr4_1:12353883-12353902 None:intergenic 25.0%
! TTCCATTAGAATCTAAACAA+TGG - chr4_1:12353884-12353903 None:intergenic 25.0%
!!! ACTATCGATATCGTTTTTAT+TGG + chr4_1:12354077-12354096 Msa0535800:intron 25.0%
! AACAAGTATAATTTCTACCT+CGG - chr4_1:12354751-12354770 None:intergenic 25.0%
! TTGTTTGAAGAGCAAAAAAT+TGG + chr4_1:12354766-12354785 Msa0535800:intron 25.0%
! TGTTTGAAGAGCAAAAAATT+GGG + chr4_1:12354767-12354786 Msa0535800:intron 25.0%
! TTTGTAGCTATTCTAATACA+TGG + chr4_1:12354997-12355016 Msa0535800:intron 25.0%
! TTAGTAGCACTATAGTATAT+CGG + chr4_1:12355235-12355254 Msa0535800:intron 25.0%
!!! TTTGCTATTCATAATACGTT+GGG - chr4_1:12355649-12355668 None:intergenic 25.0%
!!! TTTTGCTATTCATAATACGT+TGG - chr4_1:12355650-12355669 None:intergenic 25.0%
!!! ATAAGTTACTCATTTTAGGA+GGG - chr4_1:12356529-12356548 None:intergenic 25.0%
! GGGTATTAATGATAAAATCA+AGG - chr4_1:12356641-12356660 None:intergenic 25.0%
! TAGTAACCAGTACAAAAAAT+TGG - chr4_1:12356725-12356744 None:intergenic 25.0%
! ATTTCATCTTCTTTACATCT+TGG - chr4_1:12356826-12356845 None:intergenic 25.0%
!! ATGTCAATGTTTTCATCTTT+CGG - chr4_1:12356912-12356931 None:intergenic 25.0%
! AACAAGAAGAAACAATAGTT+TGG - chr4_1:12356976-12356995 None:intergenic 25.0%
!!! AAGTTGGTTTTATTTTAGCT+AGG + chr4_1:12357027-12357046 Msa0535800:three_prime_UTR 25.0%
CAAGTCAACAACAAGAAAAA+CGG - chr4_1:12352712-12352731 None:intergenic 30.0%
TGGTTTGATTCTTGTGTTAA+TGG + chr4_1:12352867-12352886 Msa0535800:intron 30.0%
!!! TTTTTTTTGTGGTGAATCAG+TGG + chr4_1:12352900-12352919 Msa0535800:intron 30.0%
!!! TTTTTTTGTGGTGAATCAGT+GGG + chr4_1:12352901-12352920 Msa0535800:intron 30.0%
GTTGTTCTGATGAAGAATTA+TGG + chr4_1:12352926-12352945 Msa0535800:CDS 30.0%
TTCTGATGAAGAATTATGGA+AGG + chr4_1:12352930-12352949 Msa0535800:CDS 30.0%
! AGTGTTTTCTATTTTCCTCA+AGG + chr4_1:12352994-12353013 Msa0535800:CDS 30.0%
!! TGTCGCGAATTTTGATAATT+TGG + chr4_1:12353093-12353112 Msa0535800:intron 30.0%
! TTTGATAATTTGGAGAATCG+TGG + chr4_1:12353103-12353122 Msa0535800:intron 30.0%
AATTCTAGTCATGAGAATTG+TGG + chr4_1:12353149-12353168 Msa0535800:intron 30.0%
TAATTTAGTCACGAGAATTG+TGG - chr4_1:12353203-12353222 None:intergenic 30.0%
!! AATTTTAGTGACAAGACTCA+TGG + chr4_1:12353248-12353267 Msa0535800:intron 30.0%
CTTGTCGCAATTATTGATAT+CGG + chr4_1:12353272-12353291 Msa0535800:intron 30.0%
TTGTCGCAATTATTGATATC+GGG + chr4_1:12353273-12353292 Msa0535800:intron 30.0%
TACAATTGAGATTGCATCAA+CGG - chr4_1:12353317-12353336 None:intergenic 30.0%
CCAACTACAACAAACAAAAA+AGG - chr4_1:12353546-12353565 None:intergenic 30.0%
!!! CCTTTTTTGTTTGTTGTAGT+TGG + chr4_1:12353543-12353562 Msa0535800:intron 30.0%
!!! TTTTTGTTTGTTGTAGTTGG+AGG + chr4_1:12353546-12353565 Msa0535800:intron 30.0%
TATCGTGAATATCCATTTAC+TGG + chr4_1:12353636-12353655 Msa0535800:CDS 30.0%
GGAAGAAAATTACCAGTAAA+TGG - chr4_1:12353651-12353670 None:intergenic 30.0%
AGTTTATGCTCAGATTACTT+TGG + chr4_1:12353780-12353799 Msa0535800:CDS 30.0%
TCCCATTGTTTAGATTCTAA+TGG + chr4_1:12353879-12353898 Msa0535800:intron 30.0%
! TTGCAGAATGAGTGAATTTT+TGG - chr4_1:12353967-12353986 None:intergenic 30.0%
ATCGATAGTATTAGTACCAA+AGG - chr4_1:12354066-12354085 None:intergenic 30.0%
! CGCTTTAAGCATATATTTAG+AGG + chr4_1:12354214-12354233 Msa0535800:CDS 30.0%
AAACAAGAGAAATGAGTTCA+GGG - chr4_1:12354314-12354333 None:intergenic 30.0%
AGTTTACCTCAAAAACACAA+AGG - chr4_1:12354418-12354437 None:intergenic 30.0%
TGCTTTCTGTTTCATTTACA+TGG + chr4_1:12354443-12354462 Msa0535800:intron 30.0%
!! GTCAATAATAAGTTTGCTGT+TGG + chr4_1:12354886-12354905 Msa0535800:CDS 30.0%
GTATCGTTAACTAAATGAGA+AGG - chr4_1:12355741-12355760 None:intergenic 30.0%
ATGTTCAGTATAGATGATTG+AGG - chr4_1:12355807-12355826 None:intergenic 30.0%
TATCAACTTGATCATGCATA+CGG - chr4_1:12355833-12355852 None:intergenic 30.0%
!! TATGCATGATCAAGTTGATA+AGG + chr4_1:12355833-12355852 Msa0535800:CDS 30.0%
CTACACATAGAACATCTATT+CGG + chr4_1:12356131-12356150 Msa0535800:intron 30.0%
! CATAAGTTACTCATTTTAGG+AGG - chr4_1:12356530-12356549 None:intergenic 30.0%
ACATATGCATGACAAATCAT+TGG + chr4_1:12356598-12356617 Msa0535800:intron 30.0%
GATGTAAAGAAGATGAAATC+AGG + chr4_1:12356827-12356846 Msa0535800:CDS 30.0%
! TTTTATTGCTTGTGAGAAGA+AGG + chr4_1:12356998-12357017 Msa0535800:three_prime_UTR 30.0%
GAGAAGAAGGAAATTAAAGT+TGG + chr4_1:12357011-12357030 Msa0535800:three_prime_UTR 30.0%
! TAATTTGTAGAGACACAACA+AGG + chr4_1:12357103-12357122 Msa0535800:three_prime_UTR 30.0%
TGAGAGGTTGAGAAATGAAA+CGG - chr4_1:12352438-12352457 None:intergenic 35.0%
AAAACACTTTGACCAACACA+AGG - chr4_1:12352982-12353001 None:intergenic 35.0%
TGTCGCAATTATTGATATCG+GGG + chr4_1:12353274-12353293 Msa0535800:intron 35.0%
!!! TTAGAGTTTTTTGGCTTTGC+AGG + chr4_1:12353493-12353512 Msa0535800:intron 35.0%
TTTGTAGGAAGTTTCAACAC+AGG - chr4_1:12353604-12353623 None:intergenic 35.0%
ATACGACAAAGGATCTTTGT+AGG - chr4_1:12353619-12353638 None:intergenic 35.0%
AACGTCCTTACATTAGATTC+TGG - chr4_1:12353808-12353827 None:intergenic 35.0%
!!! AATGAGTGAATTTTTGGCCT+CGG - chr4_1:12353961-12353980 None:intergenic 35.0%
GATAGTATTAGTACCAAAGG+AGG - chr4_1:12354063-12354082 None:intergenic 35.0%
TTCATAACCATGAAGATCCT+TGG - chr4_1:12354191-12354210 None:intergenic 35.0%
AGGATCTTCATGGTTATGAA+TGG + chr4_1:12354191-12354210 Msa0535800:CDS 35.0%
GTGCGTTTGTACTTTCTATT+TGG + chr4_1:12354268-12354287 Msa0535800:intron 35.0%
AACAAGAGAAATGAGTTCAG+GGG - chr4_1:12354313-12354332 None:intergenic 35.0%
CAAACAAGAGAAATGAGTTC+AGG - chr4_1:12354315-12354334 None:intergenic 35.0%
! CTCATTTCTCTTGTTTGATC+AGG + chr4_1:12354318-12354337 Msa0535800:intron 35.0%
! ACTTCAAAAAGATTAGTCGC+TGG + chr4_1:12354387-12354406 Msa0535800:CDS 35.0%
!! GAGATACCTTTGTGTTTTTG+AGG + chr4_1:12354409-12354428 Msa0535800:CDS 35.0%
CGCTTTCTGTTTCATTTACA+TGG + chr4_1:12354476-12354495 Msa0535800:intron 35.0%
TTTATGTGTAGAGGGGAAAA+TGG + chr4_1:12354577-12354596 Msa0535800:intron 35.0%
TTATGTGTAGAGGGGAAAAT+GGG + chr4_1:12354578-12354597 Msa0535800:intron 35.0%
TCGTTGTATATTATAAGCCG+AGG + chr4_1:12354731-12354750 Msa0535800:CDS 35.0%
! ACACGAGTTTTTCTTTTGCT+AGG + chr4_1:12354821-12354840 Msa0535800:intron 35.0%
! ACATGGTTGATCAGATTTTC+CGG + chr4_1:12355014-12355033 Msa0535800:intron 35.0%
AATATCTTCGACTCCAACTA+TGG - chr4_1:12355042-12355061 None:intergenic 35.0%
! CATTTTGAATTTGCCCAATG+GGG - chr4_1:12355068-12355087 None:intergenic 35.0%
! CCATTTTGAATTTGCCCAAT+GGG - chr4_1:12355069-12355088 None:intergenic 35.0%
TTCAAAATGGCGATCACTTA+AGG + chr4_1:12355079-12355098 Msa0535800:intron 35.0%
GATTAACATACAAGTCCAAG+AGG - chr4_1:12355111-12355130 None:intergenic 35.0%
GTAGAAGCTGAAGAAACAAA+TGG - chr4_1:12355410-12355429 None:intergenic 35.0%
AATGAGAAGGATAGCTAGAA+CGG - chr4_1:12355728-12355747 None:intergenic 35.0%
GTTAACGATACAACAGATGA+TGG + chr4_1:12355750-12355769 Msa0535800:CDS 35.0%
!! TCAAGTTGATAAGGAGAACA+AGG + chr4_1:12355842-12355861 Msa0535800:CDS 35.0%
! GCTACAACTTATCGATTGTT+TGG + chr4_1:12355873-12355892 Msa0535800:CDS 35.0%
ATGTTCTATGTGTAGTACCT+TGG - chr4_1:12356126-12356145 None:intergenic 35.0%
GTTGTTCAAAACCTTCGAAA+AGG + chr4_1:12356221-12356240 Msa0535800:intron 35.0%
TTCGAAAAGGTTCAAATGCA+GGG + chr4_1:12356234-12356253 Msa0535800:intron 35.0%
TGATCAACTCATTGCTGAAT+TGG + chr4_1:12356302-12356321 Msa0535800:CDS 35.0%
AGACAATTTCCCATGTATTC+CGG - chr4_1:12356362-12356381 None:intergenic 35.0%
!!! TTTGCGCCAATTTTTTGTAC+TGG + chr4_1:12356716-12356735 Msa0535800:intron 35.0%
!! TTGCAGTGAGTTTTGTAACA+TGG + chr4_1:12356775-12356794 Msa0535800:intron 35.0%
TCTTCGATCGAAGAAGATAT+TGG - chr4_1:12356863-12356882 None:intergenic 35.0%
ATATCTTCTTCGATCGAAGA+AGG + chr4_1:12356863-12356882 Msa0535800:CDS 35.0%
! ACACAACAAGGCATTAATTG+TGG + chr4_1:12357115-12357134 Msa0535800:three_prime_UTR 35.0%
ATGAAACGGCGTTAGTTGTT+TGG - chr4_1:12352424-12352443 None:intergenic 40.0%
!! TCTTCGTTTGTTGTTGTGAG+AGG - chr4_1:12352454-12352473 None:intergenic 40.0%
GTAGTAGCTAGCAACAAGAA+CGG - chr4_1:12352520-12352539 None:intergenic 40.0%
TTGCTAGCTACTACTACTAG+TGG + chr4_1:12352526-12352545 Msa0535800:five_prime_UTR 40.0%
TAGCTACTACTACTAGTGGT+TGG + chr4_1:12352530-12352549 Msa0535800:five_prime_UTR 40.0%
! AACGGTATGTGACACGTTTT+TGG - chr4_1:12352694-12352713 None:intergenic 40.0%
GAATTATGGAAGGCAATTGC+AGG + chr4_1:12352940-12352959 Msa0535800:CDS 40.0%
! CTATTTTCCTCAAGGACACA+TGG + chr4_1:12353002-12353021 Msa0535800:CDS 40.0%
TAGTCATGAGAATTGTGGAC+TGG + chr4_1:12353154-12353173 Msa0535800:intron 40.0%
GTCGTGATTATTGATGTCAC+CGG + chr4_1:12353176-12353195 Msa0535800:intron 40.0%
!! TGGTATCACGGATTAGATAG+CGG + chr4_1:12353430-12353449 Msa0535800:intron 40.0%
GGATATTCACGATACGACAA+AGG - chr4_1:12353630-12353649 None:intergenic 40.0%
! TGGTGCCAGAATCTAATGTA+AGG + chr4_1:12353800-12353819 Msa0535800:intron 40.0%
GTACAGAAAATCAAAAGGGG+CGG - chr4_1:12353832-12353851 None:intergenic 40.0%
GTATTAGTACCAAAGGAGGA+AGG - chr4_1:12354059-12354078 None:intergenic 40.0%
!! TTCTTGAGTTGGTGTTGGTT+GGG - chr4_1:12354161-12354180 None:intergenic 40.0%
!! ATTCTTGAGTTGGTGTTGGT+TGG - chr4_1:12354162-12354181 None:intergenic 40.0%
ACCAACACCAACTCAAGAAT+TGG + chr4_1:12354162-12354181 Msa0535800:CDS 40.0%
!! ACCAATTCTTGAGTTGGTGT+TGG - chr4_1:12354166-12354185 None:intergenic 40.0%
TTGGCAACCAATTCTTGAGT+TGG - chr4_1:12354172-12354191 None:intergenic 40.0%
AACTCAAGAATTGGTTGCCA+AGG + chr4_1:12354171-12354190 Msa0535800:CDS 40.0%
TATGTGTAGAGGGGAAAATG+GGG + chr4_1:12354579-12354598 Msa0535800:intron 40.0%
GAAAATGGGGAATTACGTGT+TGG + chr4_1:12354592-12354611 Msa0535800:CDS 40.0%
TGGCTAGAAATCACAGATGA+CGG - chr4_1:12354652-12354671 None:intergenic 40.0%
TGTTCACACTTACGATGAAC+TGG - chr4_1:12354852-12354871 None:intergenic 40.0%
!! ATAAGTTTGCTGTTGGCATG+AGG + chr4_1:12354893-12354912 Msa0535800:CDS 40.0%
ATTCTGCTGAGTCTGACAAA+AGG + chr4_1:12354941-12354960 Msa0535800:CDS 40.0%
! AGATTTTCCGGTACCATAGT+TGG + chr4_1:12355026-12355045 Msa0535800:intron 40.0%
TCGAAGATATTTCTCCCCAT+TGG + chr4_1:12355051-12355070 Msa0535800:intron 40.0%
CGAAGATATTTCTCCCCATT+GGG + chr4_1:12355052-12355071 Msa0535800:intron 40.0%
CCCATTGGGCAAATTCAAAA+TGG + chr4_1:12355066-12355085 Msa0535800:intron 40.0%
!! GCCATTTTGAATTTGCCCAA+TGG - chr4_1:12355070-12355089 None:intergenic 40.0%
!! CACTTAAGGTATTGTCCTCT+TGG + chr4_1:12355093-12355112 Msa0535800:intron 40.0%
ATCTCAATGATGCCGAATAG+CGG + chr4_1:12355131-12355150 Msa0535800:intron 40.0%
TTTGAATCGCCAGGTTCAAT+GGG + chr4_1:12355331-12355350 Msa0535800:intron 40.0%
! TCAGGTCTTGTAATAGCTGA+AGG - chr4_1:12355362-12355381 None:intergenic 40.0%
AGCTATTACAAGACCTGACA+GGG + chr4_1:12355364-12355383 Msa0535800:intron 40.0%
! ACAAATGGTTCTATCTCCCA+TGG - chr4_1:12355395-12355414 None:intergenic 40.0%
ACATCAGGAATTTCACTGGT+TGG - chr4_1:12355476-12355495 None:intergenic 40.0%
ACCAGTGAAATTCCTGATGT+TGG + chr4_1:12355476-12355495 Msa0535800:CDS 40.0%
ACCAACATCAGGAATTTCAC+TGG - chr4_1:12355480-12355499 None:intergenic 40.0%
TGAAATTCCTGATGTTGGTG+AGG + chr4_1:12355481-12355500 Msa0535800:intron 40.0%
AATAGTTCCTCACCAACATC+AGG - chr4_1:12355491-12355510 None:intergenic 40.0%
! ATCAGCTGCCTCTATTTTCT+GGG + chr4_1:12355596-12355615 Msa0535800:CDS 40.0%
ACATTGAGGAATCAAACCGA+AGG + chr4_1:12355684-12355703 Msa0535800:CDS 40.0%
ATGAGAAGGATAGCTAGAAC+GGG - chr4_1:12355727-12355746 None:intergenic 40.0%
!! AGATGATGGTAAGAGTGTCT+CGG + chr4_1:12355764-12355783 Msa0535800:CDS 40.0%
!!! CTCTACAGCAGCTGATTTTT+TGG - chr4_1:12355919-12355938 None:intergenic 40.0%
GCATCTTCACATGCAGTAAA+CGG + chr4_1:12355942-12355961 Msa0535800:CDS 40.0%
TCACATGCAGTAAACGGTAA+CGG + chr4_1:12355948-12355967 Msa0535800:CDS 40.0%
ACCACAACAAGTTTCACCTA+AGG + chr4_1:12356064-12356083 Msa0535800:CDS 40.0%
!! TCCTTAGGTGAAACTTGTTG+TGG - chr4_1:12356068-12356087 None:intergenic 40.0%
! CTGCATTTGAACCTTTTCGA+AGG - chr4_1:12356235-12356254 None:intergenic 40.0%
CTTCGAAAAGGTTCAAATGC+AGG + chr4_1:12356233-12356252 Msa0535800:intron 40.0%
GAAGAGCTGTTTGACATCAA+GGG + chr4_1:12356324-12356343 Msa0535800:CDS 40.0%
! ATTGTCTTCACTGATGACGA+AGG + chr4_1:12356375-12356394 Msa0535800:CDS 40.0%
GAAGGAGATATGATGCTTGT+CGG + chr4_1:12356393-12356412 Msa0535800:CDS 40.0%
TAAGGATATACTCACAGCCA+TGG - chr4_1:12356426-12356445 None:intergenic 40.0%
!! GTGCATCGCTGTATTGATTA+AGG - chr4_1:12356444-12356463 None:intergenic 40.0%
CATCTTCTTTACATCTTGGC+TGG - chr4_1:12356822-12356841 None:intergenic 40.0%
AACGGCGTTAGTTGTTTGGT+TGG - chr4_1:12352420-12352439 None:intergenic 45.0%
! GGGTCAAATGTTTCTGCTGA+AGG + chr4_1:12352755-12352774 Msa0535800:CDS 45.0%
! TTTTGTGGTGAATCAGTGGG+TGG + chr4_1:12352904-12352923 Msa0535800:intron 45.0%
ACACAAGGAACATCCACCAA+TGG - chr4_1:12352967-12352986 None:intergenic 45.0%
! TTGGTGGATGTTCCTTGTGT+TGG + chr4_1:12352967-12352986 Msa0535800:CDS 45.0%
ACTTGTTCCATGTGTCCTTG+AGG - chr4_1:12353012-12353031 None:intergenic 45.0%
TAGTCACGAGAATTGTGGTC+CGG - chr4_1:12353198-12353217 None:intergenic 45.0%
!! TATCACGGATTAGATAGCGG+TGG + chr4_1:12353433-12353452 Msa0535800:intron 45.0%
! CCTCTGGTTCAGTTCTTGAT+TGG - chr4_1:12353578-12353597 None:intergenic 45.0%
CCAATCAAGAACTGAACCAG+AGG + chr4_1:12353575-12353594 Msa0535800:CDS 45.0%
GTTTCAACACAGGAATCCTC+TGG - chr4_1:12353594-12353613 None:intergenic 45.0%
CTGCAAGATCTTAACCGCTT+CGG + chr4_1:12353981-12354000 Msa0535800:CDS 45.0%
! ATGTGTACTGGTATCCGAAG+CGG - chr4_1:12353998-12354017 None:intergenic 45.0%
TTGGTTGCCAAGGATCTTCA+TGG + chr4_1:12354181-12354200 Msa0535800:CDS 45.0%
TACTCCATCCAGTGGTAAGA+AGG - chr4_1:12354359-12354378 None:intergenic 45.0%
!! CACAAAAGTACTCCATCCAG+TGG - chr4_1:12354367-12354386 None:intergenic 45.0%
AGTCTGTGTTGCAACAGCAT+GGG - chr4_1:12354707-12354726 None:intergenic 45.0%
TTGGCATGAGGTTCAAGATG+AGG + chr4_1:12354905-12354924 Msa0535800:CDS 45.0%
TTCGACTCCAACTATGGTAC+CGG - chr4_1:12355036-12355055 None:intergenic 45.0%
GTTTGAATCGCCAGGTTCAA+TGG + chr4_1:12355330-12355349 Msa0535800:intron 45.0%
CAGCTATTACAAGACCTGAC+AGG + chr4_1:12355363-12355382 Msa0535800:intron 45.0%
! CATCAGCTGCCTCTATTTTC+TGG + chr4_1:12355595-12355614 Msa0535800:CDS 45.0%
CCTAGCATCCCAGAAAATAG+AGG - chr4_1:12355607-12355626 None:intergenic 45.0%
!!! CCTCTATTTTCTGGGATGCT+AGG + chr4_1:12355604-12355623 Msa0535800:CDS 45.0%
CCTCAATGTAGCGTTGTTGT+TGG - chr4_1:12355673-12355692 None:intergenic 45.0%
CCAACAACAACGCTACATTG+AGG + chr4_1:12355670-12355689 Msa0535800:CDS 45.0%
GGAATCAAACCGAAGGAAGT+TGG + chr4_1:12355691-12355710 Msa0535800:CDS 45.0%
TGAGAAGGATAGCTAGAACG+GGG - chr4_1:12355726-12355745 None:intergenic 45.0%
GATGATTGAGGCTGTGAAAC+AGG - chr4_1:12355795-12355814 None:intergenic 45.0%
! GGTGCTGGAACTAATTTCAG+TGG - chr4_1:12355979-12355998 None:intergenic 45.0%
CTTCGAGATGTCAGACTTAC+GGG - chr4_1:12356021-12356040 None:intergenic 45.0%
CCTTCGAGATGTCAGACTTA+CGG - chr4_1:12356022-12356041 None:intergenic 45.0%
! TGCTTGTTCTGAGTCTCCTT+AGG - chr4_1:12356083-12356102 None:intergenic 45.0%
GTGGATTTGGCAACGTTGAA+TGG + chr4_1:12356276-12356295 Msa0535800:CDS 45.0%
GGAAGAGCTGTTTGACATCA+AGG + chr4_1:12356323-12356342 Msa0535800:CDS 45.0%
AGCTTCAACACCGGAATACA+TGG + chr4_1:12356349-12356368 Msa0535800:CDS 45.0%
GCTTCAACACCGGAATACAT+GGG + chr4_1:12356350-12356369 Msa0535800:CDS 45.0%
! AGTAGAGAGTATAGCGTGTC+GGG - chr4_1:12356661-12356680 None:intergenic 45.0%
! GAGTAGAGAGTATAGCGTGT+CGG - chr4_1:12356662-12356681 None:intergenic 45.0%
GAAGGCAATTGCAGGACCAT+TGG + chr4_1:12352948-12352967 Msa0535800:CDS 50.0%
! TTTTGGCCTCGGAAGTTCCT+CGG - chr4_1:12353950-12353969 None:intergenic 50.0%
GCTTCGGATACCAGTACACA+TGG + chr4_1:12353997-12354016 Msa0535800:CDS 50.0%
TCGGATACCAGTACACATGG+TGG + chr4_1:12354000-12354019 Msa0535800:CDS 50.0%
AGAGAAGCCACCATGTGTAC+TGG - chr4_1:12354010-12354029 None:intergenic 50.0%
ATGGTGGCTTCTCTGTTCTC+AGG + chr4_1:12354016-12354035 Msa0535800:CDS 50.0%
!! CAAAGGAGGAAGGCATTCTG+TGG - chr4_1:12354049-12354068 None:intergenic 50.0%
CACAGAATGCCTTCCTCCTT+TGG + chr4_1:12354047-12354066 Msa0535800:CDS 50.0%
GACACCTTCTTACCACTGGA+TGG + chr4_1:12354352-12354371 Msa0535800:CDS 50.0%
GGGAATTACGTGTTGGAGTG+AGG + chr4_1:12354599-12354618 Msa0535800:CDS 50.0%
AGGCAGTTGCAAGAACTCCT+AGG - chr4_1:12354684-12354703 None:intergenic 50.0%
GAGTCTGTGTTGCAACAGCA+TGG - chr4_1:12354708-12354727 None:intergenic 50.0%
ATGCCGAATAGCGGCTATAG+AGG + chr4_1:12355140-12355159 Msa0535800:intron 50.0%
!! ATAGAGGCGCTATAGTGCAC+AGG + chr4_1:12355156-12355175 Msa0535800:intron 50.0%
AAGGTTCGTCCCATTGAACC+TGG - chr4_1:12355343-12355362 None:intergenic 50.0%
ACCTGACAGGGTTTCACCAT+GGG + chr4_1:12355376-12355395 Msa0535800:intron 50.0%
!! CTTTTAGTCTTCGCAGCGGT+AGG - chr4_1:12355446-12355465 None:intergenic 50.0%
CTACCGCTGCGAAGACTAAA+AGG + chr4_1:12355444-12355463 Msa0535800:CDS 50.0%
!! AGGCCTTTTAGTCTTCGCAG+CGG - chr4_1:12355450-12355469 None:intergenic 50.0%
! GGAATTTCACTGGTTGGTCG+AGG - chr4_1:12355470-12355489 None:intergenic 50.0%
AGACGACAGCCAACTTCCTT+CGG - chr4_1:12355703-12355722 None:intergenic 50.0%
!! ATGGTAAGAGTGTCTCGGCT+TGG + chr4_1:12355769-12355788 Msa0535800:CDS 50.0%
ATCAGTACTCGACAAGGTGC+TGG - chr4_1:12355994-12356013 None:intergenic 50.0%
GGCAGTATCAGTACTCGACA+AGG - chr4_1:12356000-12356019 None:intergenic 50.0%
CCGTAAGTCTGACATCTCGA+AGG + chr4_1:12356019-12356038 Msa0535800:CDS 50.0%
TCTCGAAGGCTTCTTTCGAG+AGG + chr4_1:12356033-12356052 Msa0535800:CDS 50.0%
TTGTAGCAGAAGTCGCACCA+AGG + chr4_1:12356106-12356125 Msa0535800:CDS 50.0%
!! CAAATGCAGGGTGTTGCAGT+TGG + chr4_1:12356246-12356265 Msa0535800:CDS 50.0%
TCAAGGGACAGCTTCAACAC+CGG + chr4_1:12356340-12356359 Msa0535800:CDS 50.0%
TGCTTGTCGGAGATGATCCA+TGG + chr4_1:12356406-12356425 Msa0535800:CDS 50.0%
GGCAATTGCAGGACCATTGG+TGG + chr4_1:12352951-12352970 Msa0535800:CDS 55.0%
GCAAGCTGAGCCTACAATCC+CGG + chr4_1:12353915-12353934 Msa0535800:intron 55.0%
!! GTGGTAAGAAGGTGTCTGCG+CGG - chr4_1:12354348-12354367 None:intergenic 55.0%
CGCAGACACCTTCTTACCAC+TGG + chr4_1:12354348-12354367 Msa0535800:CDS 55.0%
TCTAGCCAGAGCATGCACCT+AGG + chr4_1:12354664-12354683 Msa0535800:CDS 55.0%
GAACTCCTAGGTGCATGCTC+TGG - chr4_1:12354672-12354691 None:intergenic 55.0%
CTGTGTTGCAACAGCATGGG+AGG - chr4_1:12354704-12354723 None:intergenic 55.0%
GCGCCTCTATAGCCGCTATT+CGG - chr4_1:12355146-12355165 None:intergenic 55.0%
TCCTGCGTGTTTGAATCGCC+AGG + chr4_1:12355322-12355341 Msa0535800:intron 55.0%
ACCTGGCGATTCAAACACGC+AGG - chr4_1:12355326-12355345 None:intergenic 55.0%
GACCTGACAGGGTTTCACCA+TGG + chr4_1:12355375-12355394 Msa0535800:intron 55.0%
TCCCATGGTGAAACCCTGTC+AGG - chr4_1:12355380-12355399 None:intergenic 55.0%
AGTTGGTCGCGCTGTGGATT+TGG + chr4_1:12356263-12356282 Msa0535800:CDS 55.0%
! CGCAGCGGTAGGTTGAACTG+TGG - chr4_1:12355435-12355454 None:intergenic 60.0%
TGTTGCAGTTGGTCGCGCTG+TGG + chr4_1:12356257-12356276 Msa0535800:CDS 60.0%
GTGGGCGGATCCGGGATTGT+AGG - chr4_1:12353928-12353947 None:intergenic 65.0%
AGTTCCTCGGTGGGCGGATC+CGG - chr4_1:12353937-12353956 None:intergenic 65.0%
CTCGGAAGTTCCTCGGTGGG+CGG - chr4_1:12353943-12353962 None:intergenic 65.0%
GGCCTCGGAAGTTCCTCGGT+GGG - chr4_1:12353946-12353965 None:intergenic 65.0%
TGGCCTCGGAAGTTCCTCGG+TGG - chr4_1:12353947-12353966 None:intergenic 65.0%
AATCCCGGATCCGCCCACCG+AGG + chr4_1:12353930-12353949 Msa0535800:CDS 70.0%
GTTCCTCGGTGGGCGGATCC+GGG - chr4_1:12353936-12353955 None:intergenic 70.0%
CGCCCACCGAGGAACTTCCG+AGG + chr4_1:12353941-12353960 Msa0535800:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 12352384 12357193 12352384 ID=Msa0535800;Name=Msa0535800
chr4_1 mRNA 12352384 12357193 12352384 ID=Msa0535800-mRNA-1;Parent=Msa0535800;Name=Msa0535800-mRNA-1;_AED=0.10;_eAED=0.10;_QI=359|0.91|0.92|1|0.91|0.92|13|274|629
chr4_1 exon 12352384 12352776 12352384 ID=Msa0535800-mRNA-1:exon:3985;Parent=Msa0535800-mRNA-1
chr4_1 exon 12352920 12353029 12352920 ID=Msa0535800-mRNA-1:exon:3986;Parent=Msa0535800-mRNA-1
chr4_1 exon 12353562 12353657 12353562 ID=Msa0535800-mRNA-1:exon:3987;Parent=Msa0535800-mRNA-1
chr4_1 exon 12353760 12353816 12353760 ID=Msa0535800-mRNA-1:exon:3988;Parent=Msa0535800-mRNA-1
chr4_1 exon 12353916 12354068 12353916 ID=Msa0535800-mRNA-1:exon:3989;Parent=Msa0535800-mRNA-1
chr4_1 exon 12354151 12354235 12354151 ID=Msa0535800-mRNA-1:exon:3990;Parent=Msa0535800-mRNA-1
chr4_1 exon 12354340 12354430 12354340 ID=Msa0535800-mRNA-1:exon:3991;Parent=Msa0535800-mRNA-1
chr4_1 exon 12354588 12354752 12354588 ID=Msa0535800-mRNA-1:exon:3992;Parent=Msa0535800-mRNA-1
chr4_1 exon 12354843 12354962 12354843 ID=Msa0535800-mRNA-1:exon:3993;Parent=Msa0535800-mRNA-1
chr4_1 exon 12355385 12355497 12355385 ID=Msa0535800-mRNA-1:exon:3994;Parent=Msa0535800-mRNA-1
chr4_1 exon 12355589 12356127 12355589 ID=Msa0535800-mRNA-1:exon:3995;Parent=Msa0535800-mRNA-1
chr4_1 exon 12356243 12356430 12356243 ID=Msa0535800-mRNA-1:exon:3996;Parent=Msa0535800-mRNA-1
chr4_1 exon 12356781 12357193 12356781 ID=Msa0535800-mRNA-1:exon:3997;Parent=Msa0535800-mRNA-1
chr4_1 five_prime_UTR 12352384 12352742 12352384 ID=Msa0535800-mRNA-1:five_prime_utr;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12352743 12352776 12352743 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12352920 12353029 12352920 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12353562 12353657 12353562 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12353760 12353816 12353760 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12353916 12354068 12353916 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12354151 12354235 12354151 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12354340 12354430 12354340 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12354588 12354752 12354588 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12354843 12354962 12354843 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12355385 12355497 12355385 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12355589 12356127 12355589 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12356243 12356430 12356243 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 CDS 12356781 12356919 12356781 ID=Msa0535800-mRNA-1:cds;Parent=Msa0535800-mRNA-1
chr4_1 three_prime_UTR 12356920 12357193 12356920 ID=Msa0535800-mRNA-1:three_prime_utr;Parent=Msa0535800-mRNA-1
Gene Sequence

>Msa0535800

ATGTTGAATCATGGGTCAAATGTTTCTGCTGAAGTGGGTGGTTGTTCTGATGAAGAATTATGGAAGGCAATTGCAGGACCATTGGTGGATGTTCCTTGTGTTGGTCAAAGTGTTTTCTATTTTCCTCAAGGACACATGGAACAATTGGAGGCTTCTACCAATCAAGAACTGAACCAGAGGATTCCTGTGTTGAAACTTCCTACAAAGATCCTTTGTCGTATCGTGAATATCCATTTACTGGCTGAACAAGAAACAGATGAAGTTTATGCTCAGATTACTTTGGTGCCAGAATCTAATCAAGCTGAGCCTACAATCCCGGATCCGCCCACCGAGGAACTTCCGAGGCCAAAAATTCACTCATTCTGCAAGATCTTAACCGCTTCGGATACCAGTACACATGGTGGCTTCTCTGTTCTCAGGAAACATGCCACAGAATGCCTTCCTCCTTTGGACATGTCCCAACCAACACCAACTCAAGAATTGGTTGCCAAGGATCTTCATGGTTATGAATGGCGCTTTAAGCATATATTTAGAGGTCAGCCGCGCAGACACCTTCTTACCACTGGATGGAGTACTTTTGTGACTTCAAAAAGATTAGTCGCTGGAGATACCTTTGTGTTTTTGAGAGGGGAAAATGGGGAATTACGTGTTGGAGTGAGGCGTCTTGCTCGTCAGTCAAGTAGCATGCCGTCATCTGTGATTTCTAGCCAGAGCATGCACCTAGGAGTTCTTGCAACTGCCTCCCATGCTGTTGCAACACAGACTCTCTTCGTTGTATATTATAAGCCGAGGACGAGCCAGTTCATCGTAAGTGTGAACAAGTACTTGTCTGCTGTCAATAATAAGTTTGCTGTTGGCATGAGGTTCAAGATGAGGTTTGAGAGTGATGATTCTGCTGAGTCTGACAAAAGGGTTTCACCATGGGAGATAGAACCATTTGTTTCTTCAGCTTCTACAACCACAGTTCAACCTACCGCTGCGAAGACTAAAAGGCCTCGACCAACCAGTGAAATTCCTGATGTTGACACAACATCAGCTGCCTCTATTTTCTGGGATGCTAGGATGTCACAAACTGATATGACCCAACGTATTATGAATAGCAAAACCAACAACAACGCTACATTGAGGAATCAAACCGAAGGAAGTTGGCTGTCGTCTCCCCGTTCTAGCTATCCTTCTCATTTAGTTAACGATACAACAGATGATGGTAAGAGTGTCTCGGCTTGGCCTGTTTCACAGCCTCAATCATCTATACTGAACATCGACCGTATGCATGATCAAGTTGATAAGGAGAACAAGGTCGAGACTGCTACAACTTATCGATTGTTTGGAATTGATCTTATTGATCATTCCAAAAAATCAGCTGCTGTAGAGATAGCATCTTCACATGCAGTAAACGGTAACGGAGTTACCACTGAAATTAGTTCCAGCACCTTGTCGAGTACTGATACTGCCCGTAAGTCTGACATCTCGAAGGCTTCTTTCGAGAGGAAACAAGAACCACAACAAGTTTCACCTAAGGAGACTCAGAACAAGCAGATTTGTAGCAGAAGTCGCACCAAGGTTCAAATGCAGGGTGTTGCAGTTGGTCGCGCTGTGGATTTGGCAACGTTGAATGGTTATGATCAACTCATTGCTGAATTGGAAGAGCTGTTTGACATCAAGGGACAGCTTCAACACCGGAATACATGGGAAATTGTCTTCACTGATGACGAAGGAGATATGATGCTTGTCGGAGATGATCCATGGCTTGAGTTTTGTAACATGGTAAGAAGAATCTTCATTTGTTCCAGCCAAGATGTAAAGAAGATGAAATCAGGTAGCAAACTACCAATATCTTCTTCGATCGAAGAAGGAACTGTAATAAGCTCAGACACAACCGAAAGATGA
Protein sequence

>Msa0535800

MLNHGSNVSAEVGGCSDEELWKAIAGPLVDVPCVGQSVFYFPQGHMEQLEASTNQELNQRIPVLKLPTKILCRIVNIHLLAEQETDEVYAQITLVPESNQAEPTIPDPPTEELPRPKIHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRLARQSSSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIVSVNKYLSAVNNKFAVGMRFKMRFESDDSAESDKRVSPWEIEPFVSSASTTTVQPTAAKTKRPRPTSEIPDVDTTSAASIFWDARMSQTDMTQRIMNSKTNNNATLRNQTEGSWLSSPRSSYPSHLVNDTTDDGKSVSAWPVSQPQSSILNIDRMHDQVDKENKVETATTYRLFGIDLIDHSKKSAAVEIASSHAVNGNGVTTEISSSTLSSTDTARKSDISKASFERKQEPQQVSPKETQNKQICSRSRTKVQMQGVAVGRAVDLATLNGYDQLIAELEELFDIKGQLQHRNTWEIVFTDDEGDMMLVGDDPWLEFCNMVRRIFICSSQDVKKMKSGSKLPISSSIEEGTVISSDTTER*