AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0535840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0535840 MtrunA17_Chr4g0003511 84.471 1011 116 5 1 1001 73 1052 0.0 1670
Msa0535840 MtrunA17_Chr4g0003501 84.356 1010 94 7 1 1001 1 955 0.0 1651
Msa0535840 MtrunA17_Chr5g0399801 73.403 1049 204 13 13 1001 56 1089 0.0 1476
Msa0535840 MtrunA17_Chr7g0232811 42.669 532 218 10 490 1001 75 539 1.82e-126 395
Msa0535840 MtrunA17_Chr8g0354821 40.105 571 313 14 450 998 122 685 7.60e-121 385
Msa0535840 MtrunA17_Chr3g0080761 40.367 545 293 15 480 1000 127 663 2.33e-118 377
Msa0535840 MtrunA17_Chr6g0476111 40.996 522 265 13 516 1001 180 694 4.69e-117 375
Msa0535840 MtrunA17_Chr7g0252211 41.154 520 264 14 516 1001 246 757 8.10e-117 376
Msa0535840 MtrunA17_Chr6g0476121 41.815 507 256 13 527 1001 144 643 7.24e-116 370
Msa0535840 MtrunA17_Chr7g0255181 40.684 526 271 18 493 1000 202 704 1.84e-115 371
Msa0535840 MtrunA17_Chr8g0368901 43.167 461 238 12 530 970 299 755 6.51e-115 372
Msa0535840 MtrunA17_Chr7g0232981 41.165 532 217 11 483 1001 68 516 2.29e-113 359
Msa0535840 MtrunA17_Chr8g0368911 42.082 461 247 9 528 970 290 748 2.95e-113 367
Msa0535840 MtrunA17_Chr7g0232841 40.637 534 214 13 489 1001 77 528 2.83e-110 352
Msa0535840 MtrunA17_Chr8g0369301 42.266 459 243 10 531 970 280 735 9.38e-108 352
Msa0535840 MtrunA17_Chr1g0163051 37.522 557 300 14 454 975 106 649 1.92e-107 348
Msa0535840 MtrunA17_Chr1g0170651 40.000 535 263 11 492 1001 45 546 1.27e-102 333
Msa0535840 MtrunA17_Chr6g0467421 38.641 471 244 13 528 970 109 562 3.30e-92 305
Msa0535840 MtrunA17_Chr6g0467531 38.758 467 249 13 528 970 109 562 3.70e-92 304
Msa0535840 MtrunA17_Chr6g0467381 38.641 471 244 13 528 970 109 562 1.29e-91 303
Msa0535840 MtrunA17_Chr6g0467401 38.429 471 245 13 528 970 109 562 8.07e-90 298
Msa0535840 MtrunA17_Chr3g0094881 35.478 513 281 14 494 970 123 621 3.50e-86 290
Msa0535840 MtrunA17_Chr1g0163041 36.523 512 284 16 494 975 68 568 1.13e-84 285
Msa0535840 MtrunA17_Chr6g0467411 35.608 469 236 14 530 970 50 480 3.13e-76 258
Msa0535840 MtrunA17_Chr2g0306961 34.400 500 258 12 494 970 9 461 8.59e-75 254
Msa0535840 MtrunA17_Chr5g0403241 35.802 324 143 10 719 1001 1208 1507 1.51e-44 176
Msa0535840 MtrunA17_Chr4g0075321 39.631 217 108 4 788 1001 868 1064 6.53e-39 157
Msa0535840 MtrunA17_Chr7g0232751 56.637 113 45 1 893 1001 7 119 7.56e-38 137
Msa0535840 MtrunA17_Chr8g0373821 38.426 216 103 6 786 996 343 533 6.38e-36 144
Msa0535840 MtrunA17_Chr1g0183321 31.024 332 155 13 721 996 428 741 2.58e-30 129
Msa0535840 MtrunA17_Chr1g0190311 29.970 337 159 11 721 999 325 642 8.26e-30 126
Msa0535840 MtrunA17_Chr7g0232861 36.559 186 97 4 490 671 74 242 3.79e-27 111
Msa0535840 MtrunA17_Chr7g0262001 25.872 344 167 9 715 996 380 697 2.10e-25 113
Msa0535840 MtrunA17_Chr7g0232761 36.364 198 97 6 490 679 91 267 6.19e-25 105
Msa0535840 MtrunA17_Chr7g0232871 43.810 105 30 1 778 882 2 77 1.64e-21 90.5
Msa0535840 MtrunA17_Chr1g0201621 32.821 195 93 8 806 997 61 220 6.62e-19 91.3
Msa0535840 MtrunA17_Chr2g0305371 32.990 194 94 6 807 1000 314 471 1.08e-18 90.9
Msa0535840 MtrunA17_Chr6g0477001 31.313 198 102 6 803 1000 87 250 1.22e-18 88.6
Msa0535840 MtrunA17_Chr3g0125251 34.184 196 85 7 811 1000 1307 1464 1.80e-18 91.7
Msa0535840 MtrunA17_Chr1g0201311 32.308 195 94 8 806 997 61 220 2.01e-18 89.7
Msa0535840 MtrunA17_Chr5g0448331 34.615 156 85 4 556 700 267 416 2.27e-16 84.0
Msa0535840 MtrunA17_Chr8g0389931 33.974 156 86 4 556 700 261 410 1.05e-15 82.0
Msa0535840 MtrunA17_Chr6g0460921 29.046 241 127 9 766 1000 217 419 4.94e-15 78.6
Msa0535840 MtrunA17_Chr8g0347071 33.548 155 65 5 827 975 806 928 8.12e-13 72.8
Msa0535840 MtrunA17_Chr7g0235081 34.177 158 77 6 817 973 182 313 1.06e-12 70.9
Msa0535840 MtrunA17_Chr2g0297191 26.744 172 92 4 829 1000 1033 1170 1.07e-12 72.8
Msa0535840 MtrunA17_Chr7g0275611 33.548 155 65 5 827 975 821 943 1.45e-12 72.0
Msa0535840 MtrunA17_Chr1g0149611 27.485 171 96 5 830 1000 365 507 1.12e-11 68.6
Msa0535840 MtrunA17_Chr1g0147121 32.867 143 58 4 839 975 903 1013 5.39e-11 67.0
Msa0535840 MtrunA17_Chr3g0126701 34.266 143 56 5 839 975 932 1042 7.20e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0535840 AT2G22740.2 61.950 523 182 8 494 1001 270 790 0.0 642
Msa0535840 AT2G22740.1 61.950 523 182 8 494 1001 270 790 0.0 642
Msa0535840 AT2G35160.2 60.078 516 172 5 493 1001 306 794 0.0 637
Msa0535840 AT2G35160.5 60.078 516 172 5 493 1001 270 758 0.0 637
Msa0535840 AT2G35160.3 60.078 516 172 5 493 1001 306 794 0.0 637
Msa0535840 AT2G35160.1 60.078 516 172 5 493 1001 306 794 0.0 637
Msa0535840 AT2G35160.4 60.078 516 172 5 493 1001 306 794 0.0 637
Msa0535840 AT5G04940.2 41.418 536 284 16 483 1000 146 669 3.90e-120 383
Msa0535840 AT5G04940.1 41.418 536 284 16 483 1000 146 669 3.90e-120 383
Msa0535840 AT5G13960.1 40.187 535 277 14 496 1001 104 624 4.14e-114 365
Msa0535840 AT5G13960.2 42.412 481 245 12 550 1001 13 490 1.71e-112 357
Msa0535840 AT1G73100.1 40.187 535 290 15 482 1000 148 668 1.02e-110 358
Msa0535840 AT4G13460.1 38.627 510 288 11 486 975 137 641 1.40e-104 341
Msa0535840 AT4G13460.2 38.627 510 288 11 486 975 137 641 1.40e-104 341
Msa0535840 AT2G33290.1 35.130 575 339 12 423 970 70 637 3.32e-98 323
Msa0535840 AT2G33290.3 35.130 575 339 12 423 970 70 637 3.32e-98 323
Msa0535840 AT2G33290.4 35.130 575 339 12 423 970 70 637 3.32e-98 323
Msa0535840 AT2G33290.2 35.130 575 339 12 423 970 70 637 3.32e-98 323
Msa0535840 AT2G24740.1 35.219 548 279 17 482 998 250 752 7.26e-86 293
Msa0535840 AT1G17770.1 36.998 473 269 12 551 1000 226 692 1.05e-85 291
Msa0535840 AT5G47150.1 46.977 215 111 3 490 702 114 327 1.28e-50 182
Msa0535840 AT5G47160.1 41.636 269 149 5 430 695 144 407 1.10e-45 170
Msa0535840 AT5G47160.3 41.636 269 149 5 430 695 144 407 1.10e-45 170
Msa0535840 AT5G47160.2 41.636 269 149 5 430 695 144 407 1.10e-45 170
Msa0535840 AT2G23740.1 33.956 321 160 11 711 1000 1075 1374 7.03e-38 154
Msa0535840 AT2G23740.3 33.956 321 160 11 711 1000 1082 1381 7.90e-38 154
Msa0535840 AT2G23740.6 33.956 321 160 11 711 1000 1082 1381 7.90e-38 154
Msa0535840 AT2G23740.2 33.956 321 160 11 711 1000 1082 1381 7.90e-38 154
Msa0535840 AT3G04380.1 28.453 362 183 13 692 999 121 460 2.71e-29 123
Msa0535840 AT3G04380.2 28.453 362 183 13 692 999 94 433 3.43e-29 122
Msa0535840 AT3G04380.3 28.453 362 183 13 692 999 105 444 4.01e-29 122
Msa0535840 AT3G04380.4 28.453 362 183 13 692 999 121 460 4.78e-29 122
Msa0535840 AT3G04380.6 28.453 362 183 13 692 999 94 433 5.67e-29 122
Msa0535840 AT3G04380.5 28.453 362 183 13 692 999 78 417 7.39e-29 121
Msa0535840 AT2G05900.1 37.037 216 120 9 569 772 1 212 1.74e-28 117
Msa0535840 AT2G05900.1 41.463 82 40 2 917 998 236 309 2.33e-11 66.6
Msa0535840 AT2G23740.4 34.000 250 117 9 711 929 1082 1314 1.45e-27 121
Msa0535840 AT2G23740.5 34.000 250 117 9 711 929 1082 1314 1.45e-27 121
Msa0535840 AT5G43990.16 28.443 334 162 13 721 999 373 684 3.49e-26 115
Msa0535840 AT5G43990.5 28.443 334 162 13 721 999 373 684 3.49e-26 115
Msa0535840 AT5G43990.17 28.443 334 162 13 721 999 373 684 3.49e-26 115
Msa0535840 AT5G43990.14 28.443 334 162 13 721 999 373 684 3.49e-26 115
Msa0535840 AT5G43990.15 28.443 334 162 13 721 999 396 707 3.83e-26 115
Msa0535840 AT5G43990.10 28.443 334 162 13 721 999 396 707 3.83e-26 115
Msa0535840 AT5G43990.3 28.443 334 162 13 721 999 393 704 3.93e-26 115
Msa0535840 AT5G43990.11 28.443 334 162 13 721 999 393 704 3.93e-26 115
Msa0535840 AT5G43990.1 28.443 334 162 13 721 999 393 704 3.93e-26 115
Msa0535840 AT5G43990.4 28.443 334 162 13 721 999 393 704 3.93e-26 115
Msa0535840 AT5G43990.9 28.443 334 162 13 721 999 416 727 4.54e-26 115
Msa0535840 AT5G43990.2 28.443 334 162 13 721 999 416 727 4.54e-26 115
Msa0535840 AT5G43990.7 28.443 334 162 13 721 999 304 615 7.28e-26 114
Msa0535840 AT1G04050.2 33.668 199 110 5 804 999 542 721 8.35e-26 114
Msa0535840 AT1G04050.1 33.668 199 110 5 804 999 542 721 8.35e-26 114
Msa0535840 AT1G04050.3 33.668 199 110 5 804 999 438 617 9.24e-26 114
Msa0535840 AT5G43990.8 28.443 334 162 13 721 999 324 635 9.51e-26 114
Msa0535840 AT5G43990.12 28.443 334 162 13 721 999 324 635 9.51e-26 114
Msa0535840 AT5G43990.6 28.443 334 162 13 721 999 324 635 9.51e-26 114
Msa0535840 AT5G43990.13 28.443 334 162 13 721 999 324 635 9.51e-26 114
Msa0535840 AT3G03750.2 33.163 196 115 6 806 1000 169 349 9.10e-21 95.5
Msa0535840 AT4G30860.1 30.034 293 136 13 717 1000 232 464 7.20e-19 91.7
Msa0535840 AT1G76710.2 32.828 198 95 7 806 1000 66 228 7.71e-19 91.7
Msa0535840 AT1G76710.1 32.828 198 95 7 806 1000 66 228 7.71e-19 91.7
Msa0535840 AT1G76710.4 32.828 198 95 7 806 1000 66 228 9.86e-19 91.3
Msa0535840 AT1G76710.3 32.828 198 95 7 806 1000 66 228 1.06e-18 91.3
Msa0535840 AT1G77300.2 31.579 190 96 8 813 1000 1009 1166 7.35e-17 86.7
Msa0535840 AT1G77300.1 31.579 190 96 8 813 1000 1009 1166 7.69e-17 86.7
Msa0535840 AT1G57820.1 33.758 157 86 5 556 700 277 427 2.72e-16 84.3
Msa0535840 AT1G57820.3 33.758 157 86 5 556 700 277 427 2.72e-16 84.3
Msa0535840 AT1G57820.2 33.117 154 88 5 556 700 277 424 2.05e-15 81.3
Msa0535840 AT3G59960.3 30.058 173 85 6 829 1000 112 249 2.74e-14 75.1
Msa0535840 AT3G59960.2 30.058 173 85 6 829 1000 112 249 2.74e-14 75.1
Msa0535840 AT3G59960.4 30.058 173 85 6 829 1000 112 249 2.74e-14 75.1
Msa0535840 AT3G59960.1 30.058 173 85 6 829 1000 112 249 9.04e-14 74.3
Msa0535840 AT4G08590.2 36.641 131 65 4 556 679 237 356 1.22e-13 75.1
Msa0535840 AT2G44150.1 29.651 172 87 6 829 1000 117 254 1.63e-13 73.9
Msa0535840 AT3G61740.2 34.615 156 63 6 827 975 838 961 6.06e-13 73.9
Msa0535840 AT3G61740.1 34.615 156 63 6 827 975 874 997 7.88e-13 73.6
Msa0535840 AT4G08590.6 35.878 131 67 4 556 679 237 357 1.57e-12 71.2
Msa0535840 AT3G03750.1 29.082 196 107 8 806 1000 169 333 1.62e-12 70.5
Msa0535840 AT4G08590.4 35.878 131 67 4 556 679 237 357 1.77e-12 70.9
Msa0535840 AT4G08590.5 35.878 131 67 4 556 679 237 357 1.77e-12 70.9
Msa0535840 AT4G08590.3 35.878 131 67 4 556 679 237 357 2.06e-12 70.9
Msa0535840 AT4G27910.1 31.707 164 69 6 839 996 896 1022 7.66e-12 70.1
Msa0535840 AT1G02580.1 28.571 224 125 6 766 987 485 675 2.75e-11 68.2
Msa0535840 AT5G53430.1 31.707 164 69 6 839 996 912 1038 4.80e-11 67.8

Find 215 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGCTCGAACTATGTGATTT+TGG 0.106914 4_1:-12463460 None:intergenic
TCCTGAAGGGATGGAATTTA+AGG 0.160993 4_1:-12464592 None:intergenic
CGAAGACGATGTGCCTATTT+TGG 0.176590 4_1:+12462475 Msa0535840:CDS
TTGAGTCAGAATCTGGAAAA+AGG 0.241271 4_1:-12464746 None:intergenic
AGAATAGAGCTTAATATAAT+TGG 0.247368 4_1:+12463757 Msa0535840:CDS
TGGCCTTCATCGCCAGATTC+AGG 0.250113 4_1:+12463777 Msa0535840:CDS
ATATCCCCATTATGATTAAA+TGG 0.280457 4_1:-12464429 None:intergenic
GTTGAAGGGCACTTGCATTT+AGG 0.290171 4_1:-12464486 None:intergenic
TGCAACTAGTATTGTTTCTT+CGG 0.298661 4_1:+12463837 Msa0535840:CDS
CTTGAACTTGAGTCAGAATC+TGG 0.299589 4_1:-12464753 None:intergenic
AAAGGTGTACTGAATCATTC+TGG 0.301672 4_1:+12463319 Msa0535840:CDS
GAGATTCCATTTAATCATAA+TGG 0.305009 4_1:+12464423 Msa0535840:CDS
AGATTCCATTTAATCATAAT+GGG 0.307894 4_1:+12464424 Msa0535840:CDS
TGAAGACTGTACCTTGAAAA+AGG 0.316856 4_1:+12462361 Msa0535840:CDS
AAACGATGAACCTGCAAAAC+TGG 0.322145 4_1:+12462592 Msa0535840:CDS
GCAACTAGTATTGTTTCTTC+GGG 0.325203 4_1:+12463838 Msa0535840:CDS
CATTCTGAGCATAAAGATTA+GGG 0.326248 4_1:-12464857 None:intergenic
AAAGGATGTAATTGTACTAA+TGG 0.326952 4_1:+12464354 Msa0535840:CDS
TTAGTACAATTACATCCTTT+TGG 0.326965 4_1:-12464351 None:intergenic
ACGTCAAAAGTCTCCAAAAT+AGG 0.328102 4_1:-12462488 None:intergenic
GTACGCAACAACATTTCTTA+TGG 0.328564 4_1:-12464386 None:intergenic
GATAAGAGTGGCAAAGATTC+AGG 0.330173 4_1:+12462122 Msa0535840:CDS
CAAGTTGGCTAACTCTATTA+TGG 0.333516 4_1:-12464512 None:intergenic
GGAACCACCAATATTGATAT+TGG 0.341978 4_1:-12462750 None:intergenic
TGAAGGAGGCTTTAACTAAA+AGG 0.341984 4_1:+12462783 Msa0535840:CDS
GAGTCATGTTGGCAGGATAT+AGG 0.343797 4_1:+12464084 Msa0535840:CDS
GTCTTATCTGATCAAGTAGA+TGG 0.349850 4_1:+12462263 Msa0535840:CDS
TGAGGTTAACATAAATTCTA+AGG 0.349922 4_1:+12463036 Msa0535840:CDS
GGGATAAGATTGCAACATTC+AGG 0.352004 4_1:-12464327 None:intergenic
AATATCTTGGGATCTGTTCC+AGG 0.356395 4_1:+12463706 Msa0535840:CDS
TCCTTAAATTCCATCCCTTC+AGG 0.359885 4_1:+12464591 Msa0535840:CDS
ATACGATGCCTTTGATATAT+AGG 0.362188 4_1:-12462681 None:intergenic
AATCTATACCACCCTGAATC+TGG 0.363176 4_1:-12463789 None:intergenic
AAAGATTAGGGGAGCAACTA+TGG 0.371994 4_1:-12464845 None:intergenic
TCAAGTAGATGGGGATAGTT+TGG 0.377351 4_1:+12462274 Msa0535840:CDS
TACACCCCATCCCATTGAAT+TGG 0.382244 4_1:-12464565 None:intergenic
TCGTTGTCCAATATCAATAT+TGG 0.394388 4_1:+12462743 Msa0535840:CDS
ATTGGTTGGCATGGAAACTA+TGG 0.396042 4_1:+12462322 Msa0535840:CDS
ACATTCTGAGCATAAAGATT+AGG 0.400673 4_1:-12464858 None:intergenic
GACATAGCTGCCTCGCCAGC+TGG 0.412521 4_1:-12462704 None:intergenic
ACTTCTTTCATATTTGACTT+TGG 0.416957 4_1:-12463616 None:intergenic
ACTTCCTTCAAGCCAAGCTC+TGG 0.417747 4_1:-12464159 None:intergenic
TCGGTTATGTATTTAAATGT+AGG 0.420707 4_1:-12464294 None:intergenic
TGTGGTTCTGTGGAATGTAC+TGG 0.421622 4_1:+12465032 Msa0535840:CDS
AGTCATGTTGGCAGGATATA+GGG 0.423970 4_1:+12464085 Msa0535840:CDS
CGGTTATGTATTTAAATGTA+GGG 0.424018 4_1:-12464293 None:intergenic
CACCCTGAATCTGGCGATGA+AGG 0.425090 4_1:-12463780 None:intergenic
ACTATCGATGCCGCTCAGTT+TGG 0.425253 4_1:+12464801 Msa0535840:CDS
TTCTATGAAAAGCATGGAAC+AGG 0.428026 4_1:-12463567 None:intergenic
TCAACCAGAGCTTGGCTTGA+AGG 0.433037 4_1:+12464155 Msa0535840:CDS
TGGCGAGGTTCTTGAAGAAA+AGG 0.434427 4_1:+12464635 Msa0535840:CDS
TAATGAAGGGGAGAATATCT+TGG 0.437477 4_1:+12463693 Msa0535840:CDS
TAAAACCAATTCAATGGGAT+GGG 0.437648 4_1:+12464560 Msa0535840:CDS
GAAAGTAGTTCAAGGTTTGA+TGG 0.438952 4_1:+12463126 Msa0535840:CDS
TCAAAGAAGAAAGCTCCTTT+CGG 0.441008 4_1:-12462892 None:intergenic
CATAATAGAGTTAGCCAACT+TGG 0.449808 4_1:+12464513 Msa0535840:CDS
GAAAAGATACTCATCATTAC+CGG 0.451653 4_1:-12464673 None:intergenic
TTGATAATGTCCAGCTGGAC+AGG 0.452841 4_1:+12463275 Msa0535840:CDS
TGTGTCGAAGATATTTCCTA+TGG 0.454904 4_1:+12464219 Msa0535840:CDS
TGCTGTCTTGATGATCATAA+AGG 0.455362 4_1:-12464881 None:intergenic
ACGGAACGAAAAGGAAAGAA+AGG 0.455459 4_1:+12463243 Msa0535840:CDS
CTCTATTATGGCAGGTTGAA+GGG 0.459281 4_1:-12464500 None:intergenic
CAGAAGATCAAAAGCTTGAA+AGG 0.461492 4_1:+12463944 Msa0535840:CDS
GTTTAGCTTGCGAAGAATCC+CGG 0.462680 4_1:+12464131 Msa0535840:CDS
GCCGCTCAGTTTGGTAATGT+GGG 0.462843 4_1:+12464810 Msa0535840:CDS
TTGGTTTGGAAGATGGAAAA+GGG 0.463739 4_1:+12462050 None:intergenic
TGAACCTGCAAAAGTGGAAT+TGG 0.464663 4_1:+12462304 Msa0535840:CDS
GTAGGTTTGATGTCTAAATC+AGG 0.465650 4_1:+12463220 Msa0535840:CDS
ACTCTATTATGGCAGGTTGA+AGG 0.468122 4_1:-12464501 None:intergenic
TGCCGCTCAGTTTGGTAATG+TGG 0.469315 4_1:+12464809 Msa0535840:CDS
GCACTCATCCTGACTGAGAC+GGG 0.469960 4_1:-12462870 None:intergenic
GGCCTTCATCGCCAGATTCA+GGG 0.471401 4_1:+12463778 Msa0535840:CDS
TAACATAAATTCTAAGGAAG+TGG 0.472992 4_1:+12463042 Msa0535840:CDS
TTAAAACCAATTCAATGGGA+TGG 0.477591 4_1:+12464559 Msa0535840:CDS
CAAATATGAAAGAAGTAAAG+AGG 0.479183 4_1:+12463623 Msa0535840:CDS
AGAAAGATATATGTTTATGA+TGG 0.479440 4_1:+12464048 Msa0535840:CDS
TTTGGTTTGGAAGATGGAAA+AGG 0.479837 4_1:+12462049 None:intergenic
TGTAGTTGAGTCATGTTGGC+AGG 0.480080 4_1:+12464077 Msa0535840:CDS
GAATTCTGTTAGAGTGATAC+GGG 0.480221 4_1:+12464002 Msa0535840:CDS
GTTGCATCCGTTTCTGCTGA+TGG 0.482158 4_1:+12462086 Msa0535840:CDS
AGTAGTTCCAAGGTCTCATC+AGG 0.483311 4_1:+12463100 Msa0535840:CDS
GTTGAATATTTATTCCAAGT+TGG 0.486063 4_1:-12464527 None:intergenic
TATAGGGCCACGTGGGAAGC+TGG 0.486372 4_1:+12464101 Msa0535840:CDS
AACAAGTGACTGTACTTTGA+AGG 0.487630 4_1:+12462229 Msa0535840:CDS
TCAAATGGATGAGTCTACTT+TGG 0.489113 4_1:+12462568 Msa0535840:CDS
AATATCAATATTGGTGGTTC+CGG 0.489476 4_1:+12462752 Msa0535840:CDS
AGAATTCTGTTAGAGTGATA+CGG 0.492353 4_1:+12464001 Msa0535840:CDS
CAATGCTCCCCGTCTCAGTC+AGG 0.493023 4_1:+12462862 Msa0535840:CDS
TTTATGATCATCAAGACAGC+AGG 0.495980 4_1:+12464883 Msa0535840:CDS
AGAAGATCAAAAGCTTGAAA+GGG 0.499298 4_1:+12463945 Msa0535840:CDS
AATGAAGGGGAGAATATCTT+GGG 0.502787 4_1:+12463694 Msa0535840:CDS
AGTTCAAGGTTTGATGGCAG+TGG 0.503325 4_1:+12463132 Msa0535840:CDS
TCTGTTCCAGGGGTTGAAGT+TGG 0.503371 4_1:+12463718 Msa0535840:CDS
AAGCCAAGCTCTGGTTGACC+CGG 0.503691 4_1:-12464150 None:intergenic
AAGGGAGCTGTGTTAATGAA+GGG 0.505095 4_1:+12463680 Msa0535840:CDS
GAAAATTGATAATGTCCAGC+TGG 0.508457 4_1:+12463270 Msa0535840:CDS
AGTGATTTCATCTCATCAAA+TGG 0.508635 4_1:+12462553 Msa0535840:CDS
ACTCGTACCATCAGCAGAAA+CGG 0.511526 4_1:-12462093 None:intergenic
TGTACTGGTAGGTTGTATTG+AGG 0.511536 4_1:+12465047 Msa0535840:CDS
ACCTGCAAAACTGGCATTGG+CGG 0.513521 4_1:+12462601 Msa0535840:CDS
AGTAGTTCCAAGGTCTCATC+GGG 0.515055 4_1:+12463190 Msa0535840:CDS
AAGGTGTACTGAATCATTCT+GGG 0.515488 4_1:+12463320 Msa0535840:CDS
TGCAATCTTATCCCTCCAAA+AGG 0.515972 4_1:+12464336 Msa0535840:CDS
TTTCCTGCCCGATGAGACCT+TGG 0.518275 4_1:-12463197 None:intergenic
TGGTTCCGGTGCTTGTATGA+AGG 0.518765 4_1:+12462766 Msa0535840:CDS
TTTGATGGCAGTGGTTAAAG+AGG 0.518874 4_1:+12463141 Msa0535840:CDS
AACAACAATAATCTTTGTGA+TGG 0.520060 4_1:+12464714 Msa0535840:CDS
ATCCCGGGTCAACCAGAGCT+TGG 0.520207 4_1:+12464147 Msa0535840:CDS
TTGGCTAACTCTATTATGGC+AGG 0.524710 4_1:-12464508 None:intergenic
GCATTGCCTCCACATAAACT+TGG 0.526839 4_1:-12462845 None:intergenic
AAAACCAATTCAATGGGATG+GGG 0.526952 4_1:+12464561 Msa0535840:CDS
ATCGTATGTCAGCTCTTGCA+AGG 0.529691 4_1:-12464946 None:intergenic
TTGTCCAATATCAATATTGG+TGG 0.531639 4_1:+12462746 Msa0535840:CDS
CTCAAGTTCAAGTGAAGTAG+TGG 0.532681 4_1:+12464764 Msa0535840:CDS
TTTAGCTTGCGAAGAATCCC+GGG 0.534568 4_1:+12464132 Msa0535840:CDS
TTTCCTGCCTGATGAGACCT+TGG 0.536083 4_1:-12463107 None:intergenic
AAGTAGTTCCAAGGTCTCAT+CGG 0.536913 4_1:+12463189 Msa0535840:CDS
GAAGGGAGCTGTGTTAATGA+AGG 0.538115 4_1:+12463679 Msa0535840:CDS
GGGTGTGGTAACTTTGGATA+CGG 0.539320 4_1:+12462622 Msa0535840:CDS
TGAACCTGCAAAACTGGCAT+TGG 0.539713 4_1:+12462598 Msa0535840:CDS
TCAGGCAGGAAAGTAGTTCA+AGG 0.539738 4_1:+12463118 Msa0535840:CDS
TACTTTGAAGGAGGATCCCA+TGG 0.541291 4_1:+12462241 Msa0535840:CDS
GATAAAACTTCCTGAAGGGA+TGG 0.541390 4_1:-12464601 None:intergenic
ATGAGAATGACTCAGTGGCC+AGG 0.542434 4_1:+12463521 Msa0535840:CDS
CGGAACGAAAAGGAAAGAAA+GGG 0.542783 4_1:+12463244 Msa0535840:CDS
AAGGAAGCTGAACAAAGAAC+CGG 0.544426 4_1:+12464654 Msa0535840:CDS
GTCTCATCGGGCAGGAAAGT+AGG 0.544739 4_1:+12463202 Msa0535840:CDS
AAATCTTTCTATGAAAAGCA+TGG 0.545950 4_1:-12463573 None:intergenic
TGGCATGGAAACTATGGATA+CGG 0.546219 4_1:+12462328 Msa0535840:CDS
GATACGGGGCTATGAATCAA+TGG 0.551635 4_1:+12464017 Msa0535840:CDS
TTTATGTAGTTGAGTCATGT+TGG 0.552455 4_1:+12464073 Msa0535840:CDS
GGCACTCATCCTGACTGAGA+CGG 0.553076 4_1:-12462871 None:intergenic
TCATCACCAACTTCAACCCC+TGG 0.553210 4_1:-12463724 None:intergenic
ATTGGCGGGTGTGGTAACTT+TGG 0.553345 4_1:+12462616 Msa0535840:CDS
AGCCTCCTTCATACAAGCAC+CGG 0.554334 4_1:-12462771 None:intergenic
TAAATCAGGACGGAACGAAA+AGG 0.554578 4_1:+12463234 Msa0535840:CDS
ATTCAGTACACCTTTCGACT+TGG 0.555108 4_1:-12463311 None:intergenic
TAACGATGAACCTGCAAAAG+TGG 0.556879 4_1:+12462298 Msa0535840:CDS
TCTTATCTGATCAAGTAGAT+GGG 0.557317 4_1:+12462264 Msa0535840:CDS
CAACTAGTATTGTTTCTTCG+GGG 0.557635 4_1:+12463839 Msa0535840:CDS
AAAACTGGCATTGGCGGGTG+TGG 0.558834 4_1:+12462607 Msa0535840:CDS
AGGGAGCTGTGTTAATGAAG+GGG 0.559797 4_1:+12463681 Msa0535840:CDS
TTCTAAGGAAGTGGTTAAAG+CGG 0.560454 4_1:+12463051 Msa0535840:CDS
AACTAGTATTGTTTCTTCGG+GGG 0.564319 4_1:+12463840 Msa0535840:CDS
GTTCCAAGGTCTCATCGGGC+AGG 0.565288 4_1:+12463194 Msa0535840:CDS
CACAGATAAAACTTCCTGAA+GGG 0.565553 4_1:-12464605 None:intergenic
ATGGTGTTCACAGCACATAT+CGG 0.565881 4_1:-12464255 None:intergenic
GATACGGAATTTGCGACAGA+AGG 0.568390 4_1:+12462638 Msa0535840:CDS
GGTTATGTATTTAAATGTAG+GGG 0.572990 4_1:-12464292 None:intergenic
AGCCAAGCTCTGGTTGACCC+GGG 0.573238 4_1:-12464149 None:intergenic
AAGAAACAATACTAGTTGCA+AGG 0.576224 4_1:-12463834 None:intergenic
TCACAGATAAAACTTCCTGA+AGG 0.579555 4_1:-12464606 None:intergenic
GTTCCAAGGTCTCATCAGGC+AGG 0.585792 4_1:+12463104 Msa0535840:CDS
ATATCTTGGGATCTGTTCCA+GGG 0.585881 4_1:+12463707 Msa0535840:CDS
AAATTGTAGTTCTGATGACA+TGG 0.587546 4_1:+12463369 Msa0535840:CDS
TCAAAGGCATCGTATCCAGC+TGG 0.588086 4_1:+12462689 Msa0535840:CDS
AACTGAAGGCTGTAGTCTGA+AGG 0.588098 4_1:+12462520 Msa0535840:CDS
CCTGCAAAACTGGCATTGGC+GGG 0.589355 4_1:+12462602 Msa0535840:CDS
ACTAGTATTGTTTCTTCGGG+GGG 0.593022 4_1:+12463841 Msa0535840:CDS
TATGTCAGCTCTTGCAAGGG+AGG 0.595124 4_1:-12464942 None:intergenic
GACGTGGAATTTGCAACTGA+AGG 0.595906 4_1:+12462506 Msa0535840:CDS
AAAACTTGAAAGTAGTTCCA+AGG 0.596538 4_1:+12463090 Msa0535840:CDS
ACTGTTCAAGATGATTCTGA+AGG 0.600204 4_1:+12462974 Msa0535840:CDS
GTTATGTATTTAAATGTAGG+GGG 0.600728 4_1:-12464291 None:intergenic
CGGGGCTATGAATCAATGGA+TGG 0.606352 4_1:+12464021 Msa0535840:CDS
TTCCGGTGCTTGTATGAAGG+AGG 0.609421 4_1:+12462769 Msa0535840:CDS
TGCTGATGGTACGAGTGTTG+AGG 0.609913 4_1:+12462100 Msa0535840:CDS
CACTCATCCTGACTGAGACG+GGG 0.610274 4_1:-12462869 None:intergenic
AAAACTCGAAAGTAGTTCCA+AGG 0.612216 4_1:+12463180 Msa0535840:CDS
GTGTCGAAGATATTTCCTAT+GGG 0.615325 4_1:+12464220 Msa0535840:CDS
AGATTTATCCTATATATCAA+AGG 0.619809 4_1:+12462673 Msa0535840:CDS
AAAAGTGGAATTGGTTGGCA+TGG 0.620927 4_1:+12462313 Msa0535840:CDS
CTTATCTGATCAAGTAGATG+GGG 0.627230 4_1:+12462265 Msa0535840:CDS
AAGTTCAAGTGAAGTAGTGG+AGG 0.627990 4_1:+12464767 Msa0535840:CDS
GGACCACACTCATAGACTAG+AGG 0.629150 4_1:-12464465 None:intergenic
GGCATCGTATCCAGCTGGCG+AGG 0.630693 4_1:+12462694 Msa0535840:CDS
GATTCCATTTAATCATAATG+GGG 0.631488 4_1:+12464425 Msa0535840:CDS
CTTGGTCGTAGTAATTTGAG+TGG 0.634936 4_1:+12463496 Msa0535840:CDS
CTGTTCAAGATGATTCTGAA+GGG 0.636210 4_1:+12462975 Msa0535840:CDS
GAAGATCAAAAGCTTGAAAG+GGG 0.636952 4_1:+12463946 Msa0535840:CDS
ACTTGATCAGATAAGACCAT+GGG 0.639082 4_1:-12462257 None:intergenic
CAGTCAGGATGAGTGCCGAA+AGG 0.642494 4_1:+12462877 Msa0535840:CDS
ACATAATCATCATCATCATG+AGG 0.642724 4_1:+12463018 Msa0535840:CDS
CCTGCAAAAGTGGAATTGGT+TGG 0.646230 4_1:+12462308 Msa0535840:CDS
TCGTATGTCAGCTCTTGCAA+GGG 0.649908 4_1:-12464945 None:intergenic
AAGTGACTGTACTTTGAAGG+AGG 0.650182 4_1:+12462232 Msa0535840:CDS
CCGCTCAGTTTGGTAATGTG+GGG 0.650291 4_1:+12464811 Msa0535840:CDS
ACATTCAGGATATATCATCT+CGG 0.654068 4_1:-12464313 None:intergenic
TACTTGATCAGATAAGACCA+TGG 0.655790 4_1:-12462258 None:intergenic
AAAACTGCTACCAAGTCGAA+AGG 0.659857 4_1:+12463301 Msa0535840:CDS
TTATGATCATCAAGACAGCA+GGG 0.660006 4_1:+12464884 Msa0535840:CDS
GATACAGTTCGTGATTCCGA+TGG 0.661038 4_1:+12464984 Msa0535840:CDS
CTCAAATTACTACGACCAAG+AGG 0.664835 4_1:-12463493 None:intergenic
ACGAGTGTTGAGGATAAGAG+TGG 0.665431 4_1:+12462110 Msa0535840:CDS
TGCTTTGAAGAACAGTAGTG+AGG 0.666121 4_1:+12463975 Msa0535840:CDS
TATCTTGGGATCTGTTCCAG+GGG 0.671761 4_1:+12463708 Msa0535840:CDS
TTTGTTTGTTACAAACACTG+TGG 0.672214 4_1:+12462202 Msa0535840:CDS
GTTCTGTGGAATGTACTGGT+AGG 0.675695 4_1:+12465036 Msa0535840:CDS
CAGTGGCCAGGAATAAAGTG+AGG 0.677717 4_1:+12463533 Msa0535840:CDS
TATCTGTGAATATATTGGCG+AGG 0.678899 4_1:+12464620 Msa0535840:CDS
GCAGCAAATAACATGATGTG+AGG 0.681849 4_1:-12464909 None:intergenic
GGCAGGATATAGGGCCACGT+GGG 0.686351 4_1:+12464094 Msa0535840:CDS
AAGCCTCTAGTCTATGAGTG+TGG 0.686595 4_1:+12464462 Msa0535840:CDS
TTGATATATACAGGGCAGGG+TGG 0.688777 4_1:+12463895 Msa0535840:CDS
GTTTGATGTCTAAATCAGGA+CGG 0.690095 4_1:+12463224 Msa0535840:CDS
AATTGTAGTTCTGATGACAT+GGG 0.693133 4_1:+12463370 Msa0535840:CDS
TGGCAGGATATAGGGCCACG+TGG 0.698447 4_1:+12464093 Msa0535840:CDS
AAATTGATGAGATGAGACCA+TGG 0.705903 4_1:-12462390 None:intergenic
ATTCTGAGCATAAAGATTAG+GGG 0.715506 4_1:-12464856 None:intergenic
CCCCACATTACCAAACTGAG+CGG 0.724747 4_1:-12464811 None:intergenic
CTTCATCGCCAGATTCAGGG+TGG 0.729437 4_1:+12463781 Msa0535840:CDS
TTATAAACCAGCTTCCCACG+TGG 0.745113 4_1:-12464108 None:intergenic
TGGTCATGAGAATGACTCAG+TGG 0.759725 4_1:+12463516 Msa0535840:CDS
AATATTGATATTGGACAACG+AGG 0.767583 4_1:-12462741 None:intergenic
AATTCTGTTAGAGTGATACG+GGG 0.776687 4_1:+12464003 Msa0535840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTAAAACCAATTCAA+TGG + chr4_1:12464554-12464573 Msa0535840:CDS 15.0%
!!! ATTTTTAAAACCAATTCAAT+GGG + chr4_1:12464555-12464574 Msa0535840:CDS 15.0%
!!! ATAGGATAAATCTTGTTTTA+CGG - chr4_1:12462666-12462685 None:intergenic 20.0%
!! AGATTTATCCTATATATCAA+AGG + chr4_1:12462673-12462692 Msa0535840:CDS 20.0%
!!! TTTTCTCTTTTCTTTTTCAA+CGG - chr4_1:12463352-12463371 None:intergenic 20.0%
!!! AGTGTTTGTTATTTTCATTA+GGG - chr4_1:12463429-12463448 None:intergenic 20.0%
!!! AAGTGTTTGTTATTTTCATT+AGG - chr4_1:12463430-12463449 None:intergenic 20.0%
!! AGAATAGAGCTTAATATAAT+TGG + chr4_1:12463757-12463776 Msa0535840:CDS 20.0%
!! AGAAAGATATATGTTTATGA+TGG + chr4_1:12464048-12464067 Msa0535840:CDS 20.0%
!! AGATTCCATTTAATCATAAT+GGG + chr4_1:12464424-12464443 Msa0535840:CDS 20.0%
!!! AGTTTTATCTGTGAATATAT+TGG + chr4_1:12464615-12464634 Msa0535840:CDS 20.0%
!!! TGATGATGATTATGTTTTTC+AGG - chr4_1:12463013-12463032 None:intergenic 25.0%
! TGAGGTTAACATAAATTCTA+AGG + chr4_1:12463036-12463055 Msa0535840:CDS 25.0%
!! TAACATAAATTCTAAGGAAG+TGG + chr4_1:12463042-12463061 Msa0535840:CDS 25.0%
! AAATCTTTCTATGAAAAGCA+TGG - chr4_1:12463576-12463595 None:intergenic 25.0%
!! TTTTCATAGAAAGATTTTGC+AGG + chr4_1:12463579-12463598 Msa0535840:CDS 25.0%
!! ACTTCTTTCATATTTGACTT+TGG - chr4_1:12463619-12463638 None:intergenic 25.0%
! CAAATATGAAAGAAGTAAAG+AGG + chr4_1:12463623-12463642 Msa0535840:CDS 25.0%
!!! TCAGATGTTTTGATATATAC+AGG + chr4_1:12463886-12463905 Msa0535840:CDS 25.0%
!!! CAGATGTTTTGATATATACA+GGG + chr4_1:12463887-12463906 Msa0535840:CDS 25.0%
! AAAAAGTTCAAAACAAGAGA+AGG + chr4_1:12464192-12464211 Msa0535840:CDS 25.0%
! GTTATGTATTTAAATGTAGG+GGG - chr4_1:12464294-12464313 None:intergenic 25.0%
! GGTTATGTATTTAAATGTAG+GGG - chr4_1:12464295-12464314 None:intergenic 25.0%
! CGGTTATGTATTTAAATGTA+GGG - chr4_1:12464296-12464315 None:intergenic 25.0%
! TCGGTTATGTATTTAAATGT+AGG - chr4_1:12464297-12464316 None:intergenic 25.0%
!! TTAGTACAATTACATCCTTT+TGG - chr4_1:12464354-12464373 None:intergenic 25.0%
! AAAGGATGTAATTGTACTAA+TGG + chr4_1:12464354-12464373 Msa0535840:CDS 25.0%
! GAGATTCCATTTAATCATAA+TGG + chr4_1:12464423-12464442 Msa0535840:CDS 25.0%
! GATTCCATTTAATCATAATG+GGG + chr4_1:12464425-12464444 Msa0535840:CDS 25.0%
! ATATCCCCATTATGATTAAA+TGG - chr4_1:12464432-12464451 None:intergenic 25.0%
! GTTGAATATTTATTCCAAGT+TGG - chr4_1:12464530-12464549 None:intergenic 25.0%
! AACAACAATAATCTTTGTGA+TGG + chr4_1:12464714-12464733 Msa0535840:CDS 25.0%
! TCGTTCAACTCAAAATTTTG+AGG - chr4_1:12462179-12462198 None:intergenic 30.0%
!!! TCAAAATTTTGAGTTGAACG+AGG + chr4_1:12462178-12462197 Msa0535840:CDS 30.0%
! TTTGTTTGTTACAAACACTG+TGG + chr4_1:12462202-12462221 Msa0535840:CDS 30.0%
TCTTATCTGATCAAGTAGAT+GGG + chr4_1:12462264-12462283 Msa0535840:CDS 30.0%
!! CATGGTATATTCCTTTTTCA+AGG - chr4_1:12462375-12462394 None:intergenic 30.0%
CTTGAAAAAGGAATATACCA+TGG + chr4_1:12462373-12462392 Msa0535840:CDS 30.0%
!! TATTTTAGAGACTTTCGATG+TGG + chr4_1:12462421-12462440 Msa0535840:CDS 30.0%
AGTGATTTCATCTCATCAAA+TGG + chr4_1:12462553-12462572 Msa0535840:CDS 30.0%
ATACGATGCCTTTGATATAT+AGG - chr4_1:12462684-12462703 None:intergenic 30.0%
AATATTGATATTGGACAACG+AGG - chr4_1:12462744-12462763 None:intergenic 30.0%
TCGTTGTCCAATATCAATAT+TGG + chr4_1:12462743-12462762 Msa0535840:CDS 30.0%
TTGTCCAATATCAATATTGG+TGG + chr4_1:12462746-12462765 Msa0535840:CDS 30.0%
! AATATCAATATTGGTGGTTC+CGG + chr4_1:12462752-12462771 Msa0535840:CDS 30.0%
! AGAGATTTTCCAAGTTTATG+TGG + chr4_1:12462836-12462855 Msa0535840:CDS 30.0%
ACATAATCATCATCATCATG+AGG + chr4_1:12463018-12463037 Msa0535840:CDS 30.0%
AAAACTTGAAAGTAGTTCCA+AGG + chr4_1:12463090-12463109 Msa0535840:CDS 30.0%
!! AAATTGTAGTTCTGATGACA+TGG + chr4_1:12463369-12463388 Msa0535840:CDS 30.0%
!! AATTGTAGTTCTGATGACAT+GGG + chr4_1:12463370-12463389 Msa0535840:CDS 30.0%
!!! ATTTGACTTTGGTTTTGCTT+CGG - chr4_1:12463608-12463627 None:intergenic 30.0%
AAGAAACAATACTAGTTGCA+AGG - chr4_1:12463837-12463856 None:intergenic 30.0%
! TGCAACTAGTATTGTTTCTT+CGG + chr4_1:12463837-12463856 Msa0535840:CDS 30.0%
AGAAGATCAAAAGCTTGAAA+GGG + chr4_1:12463945-12463964 Msa0535840:CDS 30.0%
AGAATTCTGTTAGAGTGATA+CGG + chr4_1:12464001-12464020 Msa0535840:CDS 30.0%
TTTATGTAGTTGAGTCATGT+TGG + chr4_1:12464073-12464092 Msa0535840:CDS 30.0%
ACATTCAGGATATATCATCT+CGG - chr4_1:12464316-12464335 None:intergenic 30.0%
! TACAATTACATCCTTTTGGA+GGG - chr4_1:12464350-12464369 None:intergenic 30.0%
TTAAAACCAATTCAATGGGA+TGG + chr4_1:12464559-12464578 Msa0535840:CDS 30.0%
TAAAACCAATTCAATGGGAT+GGG + chr4_1:12464560-12464579 Msa0535840:CDS 30.0%
GAAAAGATACTCATCATTAC+CGG - chr4_1:12464676-12464695 None:intergenic 30.0%
! GATGAGTATCTTTTCGATAT+CGG + chr4_1:12464681-12464700 Msa0535840:CDS 30.0%
ATTCTGAGCATAAAGATTAG+GGG - chr4_1:12464859-12464878 None:intergenic 30.0%
CATTCTGAGCATAAAGATTA+GGG - chr4_1:12464860-12464879 None:intergenic 30.0%
ACATTCTGAGCATAAAGATT+AGG - chr4_1:12464861-12464880 None:intergenic 30.0%
! CTTCTTTTTGATATTGCCAT+CGG - chr4_1:12465003-12465022 None:intergenic 30.0%
!!! AAAAAGAAGTACTGCTTTTG+TGG + chr4_1:12465014-12465033 Msa0535840:CDS 30.0%
! TGAGGATACTTTTCTTCGTT+GGG - chr4_1:12462161-12462180 None:intergenic 35.0%
! TTGAGGATACTTTTCTTCGT+TGG - chr4_1:12462162-12462181 None:intergenic 35.0%
AACAAGTGACTGTACTTTGA+AGG + chr4_1:12462229-12462248 Msa0535840:CDS 35.0%
ACTTGATCAGATAAGACCAT+GGG - chr4_1:12462260-12462279 None:intergenic 35.0%
TACTTGATCAGATAAGACCA+TGG - chr4_1:12462261-12462280 None:intergenic 35.0%
GTCTTATCTGATCAAGTAGA+TGG + chr4_1:12462263-12462282 Msa0535840:CDS 35.0%
CTTATCTGATCAAGTAGATG+GGG + chr4_1:12462265-12462284 Msa0535840:CDS 35.0%
TGAAGACTGTACCTTGAAAA+AGG + chr4_1:12462361-12462380 Msa0535840:CDS 35.0%
AAATTGATGAGATGAGACCA+TGG - chr4_1:12462393-12462412 None:intergenic 35.0%
ACGTCAAAAGTCTCCAAAAT+AGG - chr4_1:12462491-12462510 None:intergenic 35.0%
!! TATTTTGGAGACTTTTGACG+TGG + chr4_1:12462490-12462509 Msa0535840:CDS 35.0%
TCAAATGGATGAGTCTACTT+TGG + chr4_1:12462568-12462587 Msa0535840:CDS 35.0%
GGAACCACCAATATTGATAT+TGG - chr4_1:12462753-12462772 None:intergenic 35.0%
! TGAAGGAGGCTTTAACTAAA+AGG + chr4_1:12462783-12462802 Msa0535840:CDS 35.0%
!!! AACACTGCAACTTTTTTACG+AGG - chr4_1:12462815-12462834 None:intergenic 35.0%
! GATTTTCCAAGTTTATGTGG+AGG + chr4_1:12462839-12462858 Msa0535840:CDS 35.0%
TCAAAGAAGAAAGCTCCTTT+CGG - chr4_1:12462895-12462914 None:intergenic 35.0%
ACTGTTCAAGATGATTCTGA+AGG + chr4_1:12462974-12462993 Msa0535840:CDS 35.0%
CTGTTCAAGATGATTCTGAA+GGG + chr4_1:12462975-12462994 Msa0535840:CDS 35.0%
! TTCTAAGGAAGTGGTTAAAG+CGG + chr4_1:12463051-12463070 Msa0535840:CDS 35.0%
GAAAGTAGTTCAAGGTTTGA+TGG + chr4_1:12463126-12463145 Msa0535840:CDS 35.0%
AAAACTCGAAAGTAGTTCCA+AGG + chr4_1:12463180-12463199 Msa0535840:CDS 35.0%
GTAGGTTTGATGTCTAAATC+AGG + chr4_1:12463220-12463239 Msa0535840:CDS 35.0%
GTTTGATGTCTAAATCAGGA+CGG + chr4_1:12463224-12463243 Msa0535840:CDS 35.0%
!! GAAAATTGATAATGTCCAGC+TGG + chr4_1:12463270-12463289 Msa0535840:CDS 35.0%
! AAAGGTGTACTGAATCATTC+TGG + chr4_1:12463319-12463338 Msa0535840:CDS 35.0%
AAGGTGTACTGAATCATTCT+GGG + chr4_1:12463320-12463339 Msa0535840:CDS 35.0%
! AGCGTAAATGTTTTTCCTCT+TGG + chr4_1:12463478-12463497 Msa0535840:CDS 35.0%
! TGTTTTCCTCACTTTATTCC+TGG - chr4_1:12463542-12463561 None:intergenic 35.0%
! TTCTATGAAAAGCATGGAAC+AGG - chr4_1:12463570-12463589 None:intergenic 35.0%
TAATGAAGGGGAGAATATCT+TGG + chr4_1:12463693-12463712 Msa0535840:CDS 35.0%
AATGAAGGGGAGAATATCTT+GGG + chr4_1:12463694-12463713 Msa0535840:CDS 35.0%
! GCAACTAGTATTGTTTCTTC+GGG + chr4_1:12463838-12463857 Msa0535840:CDS 35.0%
! CAACTAGTATTGTTTCTTCG+GGG + chr4_1:12463839-12463858 Msa0535840:CDS 35.0%
! AACTAGTATTGTTTCTTCGG+GGG + chr4_1:12463840-12463859 Msa0535840:CDS 35.0%
!!! TGTTTTGATATATACAGGGC+AGG + chr4_1:12463891-12463910 Msa0535840:CDS 35.0%
!! GTTTTGATATATACAGGGCA+GGG + chr4_1:12463892-12463911 Msa0535840:CDS 35.0%
! CTTTCAAGCTTTTGATCTTC+TGG - chr4_1:12463946-12463965 None:intergenic 35.0%
CAGAAGATCAAAAGCTTGAA+AGG + chr4_1:12463944-12463963 Msa0535840:CDS 35.0%
GAAGATCAAAAGCTTGAAAG+GGG + chr4_1:12463946-12463965 Msa0535840:CDS 35.0%
GAATTCTGTTAGAGTGATAC+GGG + chr4_1:12464002-12464021 Msa0535840:CDS 35.0%
AATTCTGTTAGAGTGATACG+GGG + chr4_1:12464003-12464022 Msa0535840:CDS 35.0%
TGTGTCGAAGATATTTCCTA+TGG + chr4_1:12464219-12464238 Msa0535840:CDS 35.0%
GTGTCGAAGATATTTCCTAT+GGG + chr4_1:12464220-12464239 Msa0535840:CDS 35.0%
! GTACAATTACATCCTTTTGG+AGG - chr4_1:12464351-12464370 None:intergenic 35.0%
GTACGCAACAACATTTCTTA+TGG - chr4_1:12464389-12464408 None:intergenic 35.0%
TGTTGTTGCGTACTCAAAAA+TGG + chr4_1:12464396-12464415 Msa0535840:CDS 35.0%
! CAAGTTGGCTAACTCTATTA+TGG - chr4_1:12464515-12464534 None:intergenic 35.0%
CATAATAGAGTTAGCCAACT+TGG + chr4_1:12464513-12464532 Msa0535840:CDS 35.0%
AAAACCAATTCAATGGGATG+GGG + chr4_1:12464561-12464580 Msa0535840:CDS 35.0%
CACAGATAAAACTTCCTGAA+GGG - chr4_1:12464608-12464627 None:intergenic 35.0%
TCACAGATAAAACTTCCTGA+AGG - chr4_1:12464609-12464628 None:intergenic 35.0%
TATCTGTGAATATATTGGCG+AGG + chr4_1:12464620-12464639 Msa0535840:CDS 35.0%
TGAGTCAGAATCTGGAAAAA+GGG - chr4_1:12464748-12464767 None:intergenic 35.0%
TTGAGTCAGAATCTGGAAAA+AGG - chr4_1:12464749-12464768 None:intergenic 35.0%
! TGCTGTCTTGATGATCATAA+AGG - chr4_1:12464884-12464903 None:intergenic 35.0%
TTTATGATCATCAAGACAGC+AGG + chr4_1:12464883-12464902 Msa0535840:CDS 35.0%
TTATGATCATCAAGACAGCA+GGG + chr4_1:12464884-12464903 Msa0535840:CDS 35.0%
GATAAGAGTGGCAAAGATTC+AGG + chr4_1:12462122-12462141 Msa0535840:CDS 40.0%
! AAGTGACTGTACTTTGAAGG+AGG + chr4_1:12462232-12462251 Msa0535840:CDS 40.0%
TCAAGTAGATGGGGATAGTT+TGG + chr4_1:12462274-12462293 Msa0535840:CDS 40.0%
TAACGATGAACCTGCAAAAG+TGG + chr4_1:12462298-12462317 Msa0535840:CDS 40.0%
TGAACCTGCAAAAGTGGAAT+TGG + chr4_1:12462304-12462323 Msa0535840:CDS 40.0%
AAAAGTGGAATTGGTTGGCA+TGG + chr4_1:12462313-12462332 Msa0535840:CDS 40.0%
ATTGGTTGGCATGGAAACTA+TGG + chr4_1:12462322-12462341 Msa0535840:CDS 40.0%
TGGCATGGAAACTATGGATA+CGG + chr4_1:12462328-12462347 Msa0535840:CDS 40.0%
AAACGATGAACCTGCAAAAC+TGG + chr4_1:12462592-12462611 Msa0535840:CDS 40.0%
! TTCTGCTTCTTTTACGTCAG+TGG - chr4_1:12462930-12462949 None:intergenic 40.0%
! TTTGATGGCAGTGGTTAAAG+AGG + chr4_1:12463141-12463160 Msa0535840:CDS 40.0%
AAGTAGTTCCAAGGTCTCAT+CGG + chr4_1:12463099-12463118 Msa0535840:CDS 40.0%
TAAATCAGGACGGAACGAAA+AGG + chr4_1:12463234-12463253 Msa0535840:CDS 40.0%
ACGGAACGAAAAGGAAAGAA+AGG + chr4_1:12463243-12463262 Msa0535840:CDS 40.0%
CGGAACGAAAAGGAAAGAAA+GGG + chr4_1:12463244-12463263 Msa0535840:CDS 40.0%
AAAACTGCTACCAAGTCGAA+AGG + chr4_1:12463301-12463320 Msa0535840:CDS 40.0%
ATTCAGTACACCTTTCGACT+TGG - chr4_1:12463314-12463333 None:intergenic 40.0%
! CGCTCGAACTATGTGATTTT+GGG - chr4_1:12463462-12463481 None:intergenic 40.0%
! ACGCTCGAACTATGTGATTT+TGG - chr4_1:12463463-12463482 None:intergenic 40.0%
CTCAAATTACTACGACCAAG+AGG - chr4_1:12463496-12463515 None:intergenic 40.0%
CTTGGTCGTAGTAATTTGAG+TGG + chr4_1:12463496-12463515 Msa0535840:CDS 40.0%
ACAAGCTGCGAAAAAGCTTA+AGG + chr4_1:12463654-12463673 Msa0535840:CDS 40.0%
CGAAAAAGCTTAAGGAGGAA+GGG + chr4_1:12463662-12463681 Msa0535840:CDS 40.0%
AAGGGAGCTGTGTTAATGAA+GGG + chr4_1:12463680-12463699 Msa0535840:CDS 40.0%
AATATCTTGGGATCTGTTCC+AGG + chr4_1:12463706-12463725 Msa0535840:CDS 40.0%
ATATCTTGGGATCTGTTCCA+GGG + chr4_1:12463707-12463726 Msa0535840:CDS 40.0%
AATCTATACCACCCTGAATC+TGG - chr4_1:12463792-12463811 None:intergenic 40.0%
! ACTAGTATTGTTTCTTCGGG+GGG + chr4_1:12463841-12463860 Msa0535840:CDS 40.0%
!! TGCTTTGAAGAACAGTAGTG+AGG + chr4_1:12463975-12463994 Msa0535840:CDS 40.0%
AGTCATGTTGGCAGGATATA+GGG + chr4_1:12464085-12464104 Msa0535840:CDS 40.0%
! CGGAATTTTCTCTTTCCCAT+AGG - chr4_1:12464238-12464257 None:intergenic 40.0%
ATGGTGTTCACAGCACATAT+CGG - chr4_1:12464258-12464277 None:intergenic 40.0%
GGGATAAGATTGCAACATTC+AGG - chr4_1:12464330-12464349 None:intergenic 40.0%
TGCAATCTTATCCCTCCAAA+AGG + chr4_1:12464336-12464355 Msa0535840:CDS 40.0%
TGTTGCGTACTCAAAAATGG+AGG + chr4_1:12464399-12464418 Msa0535840:CDS 40.0%
GTTGCGTACTCAAAAATGGA+GGG + chr4_1:12464400-12464419 Msa0535840:CDS 40.0%
TTGCGTACTCAAAAATGGAG+GGG + chr4_1:12464401-12464420 Msa0535840:CDS 40.0%
! CTCTATTATGGCAGGTTGAA+GGG - chr4_1:12464503-12464522 None:intergenic 40.0%
! ACTCTATTATGGCAGGTTGA+AGG - chr4_1:12464504-12464523 None:intergenic 40.0%
TTGGCTAACTCTATTATGGC+AGG - chr4_1:12464511-12464530 None:intergenic 40.0%
TCCTTAAATTCCATCCCTTC+AGG + chr4_1:12464591-12464610 Msa0535840:CDS 40.0%
TCCTGAAGGGATGGAATTTA+AGG - chr4_1:12464595-12464614 None:intergenic 40.0%
GATAAAACTTCCTGAAGGGA+TGG - chr4_1:12464604-12464623 None:intergenic 40.0%
AAGGAAGCTGAACAAAGAAC+CGG + chr4_1:12464654-12464673 Msa0535840:CDS 40.0%
CTTGAACTTGAGTCAGAATC+TGG - chr4_1:12464756-12464775 None:intergenic 40.0%
CTCAAGTTCAAGTGAAGTAG+TGG + chr4_1:12464764-12464783 Msa0535840:CDS 40.0%
AAGTTCAAGTGAAGTAGTGG+AGG + chr4_1:12464767-12464786 Msa0535840:CDS 40.0%
AAAGATTAGGGGAGCAACTA+TGG - chr4_1:12464848-12464867 None:intergenic 40.0%
GCAGCAAATAACATGATGTG+AGG - chr4_1:12464912-12464931 None:intergenic 40.0%
ACTCGTACCATCAGCAGAAA+CGG - chr4_1:12462096-12462115 None:intergenic 45.0%
!! ACGAGTGTTGAGGATAAGAG+TGG + chr4_1:12462110-12462129 Msa0535840:CDS 45.0%
! TACTTTGAAGGAGGATCCCA+TGG + chr4_1:12462241-12462260 Msa0535840:CDS 45.0%
!! CCAACCAATTCCACTTTTGC+AGG - chr4_1:12462311-12462330 None:intergenic 45.0%
CCTGCAAAAGTGGAATTGGT+TGG + chr4_1:12462308-12462327 Msa0535840:CDS 45.0%
! CGAAGACGATGTGCCTATTT+TGG + chr4_1:12462475-12462494 Msa0535840:CDS 45.0%
GACGTGGAATTTGCAACTGA+AGG + chr4_1:12462506-12462525 Msa0535840:CDS 45.0%
AACTGAAGGCTGTAGTCTGA+AGG + chr4_1:12462520-12462539 Msa0535840:CDS 45.0%
TGAACCTGCAAAACTGGCAT+TGG + chr4_1:12462598-12462617 Msa0535840:CDS 45.0%
GGGTGTGGTAACTTTGGATA+CGG + chr4_1:12462622-12462641 Msa0535840:CDS 45.0%
GATACGGAATTTGCGACAGA+AGG + chr4_1:12462638-12462657 Msa0535840:CDS 45.0%
GCATTGCCTCCACATAAACT+TGG - chr4_1:12462848-12462867 None:intergenic 45.0%
AGTAGTTCCAAGGTCTCATC+AGG + chr4_1:12463100-12463119 Msa0535840:CDS 45.0%
TCAGGCAGGAAAGTAGTTCA+AGG + chr4_1:12463118-12463137 Msa0535840:CDS 45.0%
! AGTTCAAGGTTTGATGGCAG+TGG + chr4_1:12463132-12463151 Msa0535840:CDS 45.0%
AGTAGTTCCAAGGTCTCATC+GGG + chr4_1:12463100-12463119 Msa0535840:CDS 45.0%
!! TTGATAATGTCCAGCTGGAC+AGG + chr4_1:12463275-12463294 Msa0535840:CDS 45.0%
TGGTCATGAGAATGACTCAG+TGG + chr4_1:12463516-12463535 Msa0535840:CDS 45.0%
AGCTGCGAAAAAGCTTAAGG+AGG + chr4_1:12463657-12463676 Msa0535840:CDS 45.0%
GCGAAAAAGCTTAAGGAGGA+AGG + chr4_1:12463661-12463680 Msa0535840:CDS 45.0%
GAAGGGAGCTGTGTTAATGA+AGG + chr4_1:12463679-12463698 Msa0535840:CDS 45.0%
AGGGAGCTGTGTTAATGAAG+GGG + chr4_1:12463681-12463700 Msa0535840:CDS 45.0%
TATCTTGGGATCTGTTCCAG+GGG + chr4_1:12463708-12463727 Msa0535840:CDS 45.0%
TTGATATATACAGGGCAGGG+TGG + chr4_1:12463895-12463914 Msa0535840:CDS 45.0%
GATACGGGGCTATGAATCAA+TGG + chr4_1:12464017-12464036 Msa0535840:CDS 45.0%
TGTAGTTGAGTCATGTTGGC+AGG + chr4_1:12464077-12464096 Msa0535840:CDS 45.0%
GAGTCATGTTGGCAGGATAT+AGG + chr4_1:12464084-12464103 Msa0535840:CDS 45.0%
TTATAAACCAGCTTCCCACG+TGG - chr4_1:12464111-12464130 None:intergenic 45.0%
!! GTTTAGCTTGCGAAGAATCC+CGG + chr4_1:12464131-12464150 Msa0535840:CDS 45.0%
!! TTTAGCTTGCGAAGAATCCC+GGG + chr4_1:12464132-12464151 Msa0535840:CDS 45.0%
AGGGGGTTTCTCGTTATCTA+TGG - chr4_1:12464277-12464296 None:intergenic 45.0%
AAGCCTCTAGTCTATGAGTG+TGG + chr4_1:12464462-12464481 Msa0535840:CDS 45.0%
!! GTTGAAGGGCACTTGCATTT+AGG - chr4_1:12464489-12464508 None:intergenic 45.0%
TACACCCCATCCCATTGAAT+TGG - chr4_1:12464568-12464587 None:intergenic 45.0%
TGGCGAGGTTCTTGAAGAAA+AGG + chr4_1:12464635-12464654 Msa0535840:CDS 45.0%
TCGTATGTCAGCTCTTGCAA+GGG - chr4_1:12464948-12464967 None:intergenic 45.0%
ATCGTATGTCAGCTCTTGCA+AGG - chr4_1:12464949-12464968 None:intergenic 45.0%
GATACAGTTCGTGATTCCGA+TGG + chr4_1:12464984-12465003 Msa0535840:CDS 45.0%
!! GTACTGCTTTTGTGGTTCTG+TGG + chr4_1:12465022-12465041 Msa0535840:CDS 45.0%
! TGTGGTTCTGTGGAATGTAC+TGG + chr4_1:12465032-12465051 Msa0535840:CDS 45.0%
! GTTCTGTGGAATGTACTGGT+AGG + chr4_1:12465036-12465055 Msa0535840:CDS 45.0%
GTTGCATCCGTTTCTGCTGA+TGG + chr4_1:12462086-12462105 Msa0535840:CDS 50.0%
! TGCTGATGGTACGAGTGTTG+AGG + chr4_1:12462100-12462119 Msa0535840:CDS 50.0%
! ACCTGCAAAACTGGCATTGG+CGG + chr4_1:12462601-12462620 Msa0535840:CDS 50.0%
! ATTGGCGGGTGTGGTAACTT+TGG + chr4_1:12462616-12462635 Msa0535840:CDS 50.0%
!! TCAAAGGCATCGTATCCAGC+TGG + chr4_1:12462689-12462708 Msa0535840:CDS 50.0%
TGGTTCCGGTGCTTGTATGA+AGG + chr4_1:12462766-12462785 Msa0535840:CDS 50.0%
TTCCGGTGCTTGTATGAAGG+AGG + chr4_1:12462769-12462788 Msa0535840:CDS 50.0%
AGCCTCCTTCATACAAGCAC+CGG - chr4_1:12462774-12462793 None:intergenic 50.0%
TTTCCTGCCTGATGAGACCT+TGG - chr4_1:12463110-12463129 None:intergenic 50.0%
!!! CAGTTTTAGACCTGTCCAGC+TGG - chr4_1:12463288-12463307 None:intergenic 50.0%
ATGAGAATGACTCAGTGGCC+AGG + chr4_1:12463521-12463540 Msa0535840:CDS 50.0%
CAGTGGCCAGGAATAAAGTG+AGG + chr4_1:12463533-12463552 Msa0535840:CDS 50.0%
TCTGTTCCAGGGGTTGAAGT+TGG + chr4_1:12463718-12463737 Msa0535840:CDS 50.0%
TCATCACCAACTTCAACCCC+TGG - chr4_1:12463727-12463746 None:intergenic 50.0%
CGGGGCTATGAATCAATGGA+TGG + chr4_1:12464021-12464040 Msa0535840:CDS 50.0%
! TCAACCAGAGCTTGGCTTGA+AGG + chr4_1:12464155-12464174 Msa0535840:CDS 50.0%
ACTTCCTTCAAGCCAAGCTC+TGG - chr4_1:12464162-12464181 None:intergenic 50.0%
GGACCACACTCATAGACTAG+AGG - chr4_1:12464468-12464487 None:intergenic 50.0%
ACTATCGATGCCGCTCAGTT+TGG + chr4_1:12464801-12464820 Msa0535840:CDS 50.0%
!! TGCCGCTCAGTTTGGTAATG+TGG + chr4_1:12464809-12464828 Msa0535840:CDS 50.0%
!! GCCGCTCAGTTTGGTAATGT+GGG + chr4_1:12464810-12464829 Msa0535840:CDS 50.0%
CCCCACATTACCAAACTGAG+CGG - chr4_1:12464814-12464833 None:intergenic 50.0%
!! CCGCTCAGTTTGGTAATGTG+GGG + chr4_1:12464811-12464830 Msa0535840:CDS 50.0%
TATGTCAGCTCTTGCAAGGG+AGG - chr4_1:12464945-12464964 None:intergenic 50.0%
!! CCTGCAAAACTGGCATTGGC+GGG + chr4_1:12462602-12462621 Msa0535840:CDS 55.0%
!! AAAACTGGCATTGGCGGGTG+TGG + chr4_1:12462607-12462626 Msa0535840:CDS 55.0%
CACTCATCCTGACTGAGACG+GGG - chr4_1:12462872-12462891 None:intergenic 55.0%
GCACTCATCCTGACTGAGAC+GGG - chr4_1:12462873-12462892 None:intergenic 55.0%
GGCACTCATCCTGACTGAGA+CGG - chr4_1:12462874-12462893 None:intergenic 55.0%
!! CAGTCAGGATGAGTGCCGAA+AGG + chr4_1:12462877-12462896 Msa0535840:CDS 55.0%
GTTCCAAGGTCTCATCAGGC+AGG + chr4_1:12463104-12463123 Msa0535840:CDS 55.0%
TTTCCTGCCCGATGAGACCT+TGG - chr4_1:12463200-12463219 None:intergenic 55.0%
GTCTCATCGGGCAGGAAAGT+AGG + chr4_1:12463202-12463221 Msa0535840:CDS 55.0%
TGGCCTTCATCGCCAGATTC+AGG + chr4_1:12463777-12463796 Msa0535840:CDS 55.0%
GGCCTTCATCGCCAGATTCA+GGG + chr4_1:12463778-12463797 Msa0535840:CDS 55.0%
CACCCTGAATCTGGCGATGA+AGG - chr4_1:12463783-12463802 None:intergenic 55.0%
CTTCATCGCCAGATTCAGGG+TGG + chr4_1:12463781-12463800 Msa0535840:CDS 55.0%
! AAGCCAAGCTCTGGTTGACC+CGG - chr4_1:12464153-12464172 None:intergenic 55.0%
! CCCGCCAATGCCAGTTTTGC+AGG - chr4_1:12462605-12462624 None:intergenic 60.0%
CAATGCTCCCCGTCTCAGTC+AGG + chr4_1:12462862-12462881 Msa0535840:CDS 60.0%
GTTCCAAGGTCTCATCGGGC+AGG + chr4_1:12463194-12463213 Msa0535840:CDS 60.0%
TGGCAGGATATAGGGCCACG+TGG + chr4_1:12464093-12464112 Msa0535840:CDS 60.0%
GGCAGGATATAGGGCCACGT+GGG + chr4_1:12464094-12464113 Msa0535840:CDS 60.0%
TATAGGGCCACGTGGGAAGC+TGG + chr4_1:12464101-12464120 Msa0535840:CDS 60.0%
ATCCCGGGTCAACCAGAGCT+TGG + chr4_1:12464147-12464166 Msa0535840:CDS 60.0%
! AGCCAAGCTCTGGTTGACCC+GGG - chr4_1:12464152-12464171 None:intergenic 60.0%
GGCATCGTATCCAGCTGGCG+AGG + chr4_1:12462694-12462713 Msa0535840:CDS 65.0%
GACATAGCTGCCTCGCCAGC+TGG - chr4_1:12462707-12462726 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 12462062 12465067 12462062 ID=Msa0535840;Name=Msa0535840
chr4_1 mRNA 12462062 12465067 12462062 ID=Msa0535840-mRNA-1;Parent=Msa0535840;Name=Msa0535840-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|1|1|0|1001
chr4_1 exon 12462062 12465067 12462062 ID=Msa0535840-mRNA-1:exon:4002;Parent=Msa0535840-mRNA-1
chr4_1 CDS 12462062 12465067 12462062 ID=Msa0535840-mRNA-1:cds;Parent=Msa0535840-mRNA-1
Gene Sequence

>Msa0535840

ATGGAAAAGGGAGACTCAACTATTGTTGCATCCGTTTCTGCTGATGGTACGAGTGTTGAGGATAAGAGTGGCAAAGATTCAGGTGAAGCTGATAGTCCCAACGAAGAAAAGTATCCTCAAAATTTTGAGTTGAACGAGGATTTGTTTGTTACAAACACTGTGGAACAAACAAGTGACTGTACTTTGAAGGAGGATCCCATGGTCTTATCTGATCAAGTAGATGGGGATAGTTTGGCTAACGATGAACCTGCAAAAGTGGAATTGGTTGGCATGGAAACTATGGATACGGAATTCGCAACTGAAGACTGTACCTTGAAAAAGGAATATACCATGGTCTCATCTCATCAATTTGATGTGATTATTTTAGAGACTTTCGATGTGGAATTTGCAACTGAAAGCTGTAGTTTGAAGAACGAAGACGATGTGCCTATTTTGGAGACTTTTGACGTGGAATTTGCAACTGAAGGCTGTAGTCTGAAGGACGAAAATGCAGTGATTTCATCTCATCAAATGGATGAGTCTACTTTGGCAAACGATGAACCTGCAAAACTGGCATTGGCGGGTGTGGTAACTTTGGATACGGAATTTGCGACAGAAGGCTCCGTAAAACAAGATTTATCCTATATATCAAAGGCATCGTATCCAGCTGGCGAGGCAGCTATGTCTGCTGACTCAAAATCCTCGTTGTCCAATATCAATATTGGTGGTTCCGGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTATGCTCCTCGTAAAAAAGTTGCAGTGTTCAGAGATTTTCCAAGTTTATGTGGAGGCAATGCTCCCCGTCTCAGTCAGGATGAGTGCCGAAAGGAGCTTTCTTCTTTGAAAAAAGTTGCTGCCACTGACGTAAAAGAAGCAGAAAATAACAAGAGAAAGTTTGATAACACTGTTCAAGATGATTCTGAAGGGAACACTAAACTTCCTGAAAAACATAATCATCATCATCATGAGGTTAACATAAATTCTAAGGAAGTGGTTAAAGCGGAAAACATGAACACTGTAAAACTTGAAAGTAGTTCCAAGGTCTCATCAGGCAGGAAAGTAGTTCAAGGTTTGATGGCAGTGGTTAAAGAGGAAAACATGAACACTGTAAAACTCGAAAGTAGTTCCAAGGTCTCATCGGGCAGGAAAGTAGGTTTGATGTCTAAATCAGGACGGAACGAAAAGGAAAGAAAGGGAAAGAAAATTGATAATGTCCAGCTGGACAGGTCTAAAACTGCTACCAAGTCGAAAGGTGTACTGAATCATTCTGGGCAGCAGCCGTTGAAAAAGAAAAGAGAAAATTGTAGTTCTGATGACATGGGTCAATTAGTAACGTTAGAGAAGAGTTCTCAAGACCCTAATGAAAATAACAAACACTTTAAAAGTGTCCCAAAATCACATAGTTCGAGCGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTGAGTGGTCATGAGAATGACTCAGTGGCCAGGAATAAAGTGAGGAAAACATTGCGCCTGTTCCATGCTTTTCATAGAAAGATTTTGCAGGAAGCCGAAGCAAAACCAAAGTCAAATATGAAAGAAGTAAAGAGGTTTGATTTACAAGCTGCGAAAAAGCTTAAGGAGGAAGGGAGCTGTGTTAATGAAGGGGAGAATATCTTGGGATCTGTTCCAGGGGTTGAAGTTGGTGATGAATTTCAGTTCAGAATAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATGTGAAACAAAAAGACAAGATCCTTGCAACTAGTATTGTTTCTTCGGGGGGCTATGCTGATGACTTAGATAACTCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAAAAGCTTGAAAGGGGAAATCTTGCTTTGAAGAACAGTAGTGAGGTAAAGAATTCTGTTAGAGTGATACGGGGCTATGAATCAATGGATGGTAAAAGAAAGATATATGTTTATGATGGACTTTATGTAGTTGAGTCATGTTGGCAGGATATAGGGCCACGTGGGAAGCTGGTTTATAAGTTTAGCTTGCGAAGAATCCCGGGTCAACCAGAGCTTGGCTTGAAGGAAGTGAAGAAATTGAAAAAGTTCAAAACAAGAGAAGGTCTATGTGTCGAAGATATTTCCTATGGGAAAGAGAAAATTCCGATATGTGCTGTGAACACCATAGATAACGAGAAACCCCCTACATTTAAATACATAACCGAGATGATATATCCTGAATGTTGCAATCTTATCCCTCCAAAAGGATGTAATTGTACTAATGGATGCTCTGACCATAAGAAATGTTGTTGCGTACTCAAAAATGGAGGGGAGATTCCATTTAATCATAATGGGGATATTGTAGAAGTAAAGCCTCTAGTCTATGAGTGTGGTCCTAAATGCAAGTGCCCTTCAACCTGCCATAATAGAGTTAGCCAACTTGGAATAAATATTCAACTCGAAATTTTTAAAACCAATTCAATGGGATGGGGTGTAAGATCCTTAAATTCCATCCCTTCAGGAAGTTTTATCTGTGAATATATTGGCGAGGTTCTTGAAGAAAAGGAAGCTGAACAAAGAACCGGTAATGATGAGTATCTTTTCGATATCGGAAATAACAAAAACAACAATAATCTTTGTGATGGACTTTCAACCCTTTTTCCAGATTCTGACTCAAGTTCAAGTGAAGTAGTGGAGGATTCTGACTTCACTATCGATGCCGCTCAGTTTGGTAATGTGGGGAGATTTGTTAACCATAGTTGCTCCCCTAATCTTTATGCTCAGAATGTCCTTTATGATCATCAAGACAGCAGGGTTCCTCACATCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGACATACGATTACAATTACACGATAGATACAGTTCGTGATTCCGATGGCAATATCAAAAAGAAGTACTGCTTTTGTGGTTCTGTGGAATGTACTGGTAGGTTGTATTGA
Protein sequence

>Msa0535840

MEKGDSTIVASVSADGTSVEDKSGKDSGEADSPNEEKYPQNFELNEDLFVTNTVEQTSDCTLKEDPMVLSDQVDGDSLANDEPAKVELVGMETMDTEFATEDCTLKKEYTMVSSHQFDVIILETFDVEFATESCSLKNEDDVPILETFDVEFATEGCSLKDENAVISSHQMDESTLANDEPAKLALAGVVTLDTEFATEGSVKQDLSYISKASYPAGEAAMSADSKSSLSNINIGGSGACMKEALTKRYAPRKKVAVFRDFPSLCGGNAPRLSQDECRKELSSLKKVAATDVKEAENNKRKFDNTVQDDSEGNTKLPEKHNHHHHEVNINSKEVVKAENMNTVKLESSSKVSSGRKVVQGLMAVVKEENMNTVKLESSSKVSSGRKVGLMSKSGRNEKERKGKKIDNVQLDRSKTATKSKGVLNHSGQQPLKKKRENCSSDDMGQLVTLEKSSQDPNENNKHFKSVPKSHSSSVNVFPLGRSNLSGHENDSVARNKVRKTLRLFHAFHRKILQEAEAKPKSNMKEVKRFDLQAAKKLKEEGSCVNEGENILGSVPGVEVGDEFQFRIELNIIGLHRQIQGGIDYVKQKDKILATSIVSSGGYADDLDNSDVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGYESMDGKRKIYVYDGLYVVESCWQDIGPRGKLVYKFSLRRIPGQPELGLKEVKKLKKFKTREGLCVEDISYGKEKIPICAVNTIDNEKPPTFKYITEMIYPECCNLIPPKGCNCTNGCSDHKKCCCVLKNGGEIPFNHNGDIVEVKPLVYECGPKCKCPSTCHNRVSQLGINIQLEIFKTNSMGWGVRSLNSIPSGSFICEYIGEVLEEKEAEQRTGNDEYLFDIGNNKNNNNLCDGLSTLFPDSDSSSSEVVEDSDFTIDAAQFGNVGRFVNHSCSPNLYAQNVLYDHQDSRVPHIMLFAAENIPPLQELTYDYNYTIDTVRDSDGNIKKKYCFCGSVECTGRLY*