Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537730 | XP_003605324.2 | 96.218 | 476 | 14 | 2 | 268 | 739 | 10 | 485 | 0.0 | 951 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537730 | sp|O65499|ZAT3_ARATH | 29.677 | 310 | 129 | 9 | 321 | 630 | 64 | 284 | 1.12e-25 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537730 | G7JJH5 | 96.218 | 476 | 14 | 2 | 268 | 739 | 10 | 485 | 0.0 | 951 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0537730 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537730 | MtrunA17_Chr4g0012791 | 96.218 | 476 | 14 | 2 | 268 | 739 | 10 | 485 | 0.0 | 951 |
| Msa0537730 | MtrunA17_Chr8g0388951 | 43.972 | 282 | 154 | 3 | 10 | 290 | 311 | 589 | 3.49e-69 | 241 |
| Msa0537730 | MtrunA17_Chr8g0388961 | 41.993 | 281 | 152 | 3 | 1 | 279 | 316 | 587 | 5.01e-62 | 220 |
| Msa0537730 | MtrunA17_Chr3g0119891 | 36.194 | 268 | 167 | 3 | 15 | 280 | 429 | 694 | 6.36e-49 | 184 |
| Msa0537730 | MtrunA17_Chr5g0408081 | 37.729 | 273 | 164 | 3 | 9 | 276 | 429 | 700 | 1.18e-48 | 184 |
| Msa0537730 | MtrunA17_Chr3g0093231 | 37.383 | 214 | 131 | 1 | 11 | 224 | 431 | 641 | 1.03e-31 | 131 |
| Msa0537730 | MtrunA17_Chr4g0061301 | 39.130 | 161 | 78 | 4 | 479 | 636 | 345 | 488 | 1.68e-24 | 108 |
| Msa0537730 | MtrunA17_Chr4g0061301 | 25.067 | 371 | 200 | 13 | 277 | 589 | 20 | 370 | 2.36e-11 | 67.0 |
| Msa0537730 | MtrunA17_Chr1g0197281 | 35.345 | 232 | 113 | 10 | 413 | 635 | 98 | 301 | 1.24e-22 | 100 |
| Msa0537730 | MtrunA17_Chr5g0425411 | 40.940 | 149 | 67 | 2 | 482 | 630 | 119 | 246 | 2.37e-21 | 94.0 |
| Msa0537730 | MtrunA17_Chr5g0448611 | 44.737 | 114 | 49 | 3 | 482 | 590 | 130 | 234 | 3.71e-20 | 91.3 |
| Msa0537730 | MtrunA17_Chr7g0231181 | 36.310 | 168 | 49 | 5 | 470 | 637 | 231 | 340 | 1.36e-19 | 91.3 |
| Msa0537730 | MtrunA17_Chr1g0207451 | 32.500 | 200 | 51 | 6 | 391 | 590 | 39 | 154 | 5.80e-19 | 87.4 |
| Msa0537730 | MtrunA17_Chr1g0180311 | 34.978 | 223 | 106 | 10 | 416 | 635 | 80 | 266 | 3.88e-16 | 79.7 |
| Msa0537730 | MtrunA17_Chr3g0134711 | 29.208 | 202 | 77 | 5 | 389 | 590 | 30 | 165 | 5.45e-16 | 78.2 |
| Msa0537730 | MtrunA17_Chr2g0320311 | 28.800 | 250 | 109 | 10 | 413 | 635 | 71 | 278 | 6.89e-16 | 79.0 |
| Msa0537730 | MtrunA17_Chr4g0027991 | 36.686 | 169 | 75 | 6 | 481 | 635 | 112 | 262 | 4.54e-15 | 76.6 |
| Msa0537730 | MtrunA17_Chr1g0188911 | 30.846 | 201 | 103 | 7 | 448 | 634 | 15 | 193 | 2.96e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537730 | AT1G19260.1 | 39.080 | 261 | 157 | 2 | 16 | 276 | 418 | 676 | 7.88e-51 | 190 |
| Msa0537730 | AT3G29765.1 | 38.314 | 261 | 159 | 2 | 16 | 276 | 185 | 443 | 5.12e-49 | 181 |
| Msa0537730 | AT4G09660.1 | 37.548 | 261 | 161 | 2 | 16 | 276 | 362 | 620 | 6.90e-48 | 180 |
| Msa0537730 | AT1G41920.1 | 39.015 | 264 | 159 | 2 | 8 | 271 | 235 | 496 | 1.89e-44 | 167 |
| Msa0537730 | AT3G29763.1 | 38.182 | 220 | 135 | 1 | 16 | 235 | 286 | 504 | 2.74e-42 | 161 |
| Msa0537730 | AT3G29450.1 | 39.512 | 205 | 117 | 2 | 3 | 201 | 283 | 486 | 2.88e-34 | 138 |
| Msa0537730 | AT1G02040.1 | 36.437 | 247 | 99 | 8 | 391 | 632 | 89 | 282 | 4.48e-31 | 124 |
| Msa0537730 | AT4G35280.1 | 29.677 | 310 | 129 | 9 | 321 | 630 | 64 | 284 | 1.14e-26 | 110 |
| Msa0537730 | AT2G17180.1 | 28.076 | 317 | 115 | 8 | 326 | 642 | 57 | 260 | 1.01e-24 | 105 |
| Msa0537730 | AT5G03510.1 | 31.061 | 264 | 143 | 9 | 387 | 647 | 43 | 270 | 2.11e-21 | 95.9 |
| Msa0537730 | AT2G28200.1 | 31.474 | 251 | 107 | 9 | 403 | 635 | 58 | 261 | 1.23e-19 | 90.5 |
| Msa0537730 | AT3G60580.1 | 30.088 | 226 | 90 | 4 | 411 | 636 | 121 | 278 | 3.44e-19 | 89.4 |
| Msa0537730 | AT5G04390.1 | 29.070 | 258 | 112 | 8 | 413 | 635 | 96 | 317 | 1.63e-18 | 88.6 |
| Msa0537730 | AT3G49930.1 | 31.188 | 202 | 74 | 5 | 389 | 590 | 36 | 172 | 5.17e-18 | 84.0 |
| Msa0537730 | AT3G10470.1 | 33.714 | 175 | 90 | 2 | 481 | 635 | 181 | 349 | 9.74e-18 | 86.7 |
| Msa0537730 | AT5G56200.1 | 33.793 | 145 | 69 | 2 | 484 | 617 | 344 | 472 | 1.55e-17 | 86.7 |
| Msa0537730 | AT1G02030.1 | 29.012 | 324 | 143 | 10 | 333 | 639 | 7 | 260 | 5.11e-17 | 82.4 |
| Msa0537730 | AT3G19580.1 | 30.986 | 213 | 80 | 8 | 389 | 590 | 32 | 188 | 1.22e-16 | 81.3 |
| Msa0537730 | AT3G19580.2 | 30.986 | 213 | 80 | 8 | 389 | 590 | 32 | 188 | 1.22e-16 | 81.3 |
| Msa0537730 | AT5G67450.1 | 31.220 | 205 | 88 | 6 | 389 | 590 | 33 | 187 | 2.17e-16 | 80.1 |
| Msa0537730 | AT1G49900.1 | 36.364 | 110 | 37 | 3 | 481 | 590 | 192 | 268 | 9.11e-12 | 69.3 |
Find 127 sgRNAs with CRISPR-Local
Find 435 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGACTTGAATGCATTAT+TGG | 0.177885 | 4_1:+16574902 | None:intergenic |
| TTCCAATAACCCTACATTAA+TGG | 0.180867 | 4_1:-16568507 | Msa0537730:CDS |
| ATTTAGGTATTTGTTCTATT+TGG | 0.213723 | 4_1:+16568327 | None:intergenic |
| CTTGAAGATTATGCGGTTAA+AGG | 0.224025 | 4_1:-16575377 | Msa0537730:CDS |
| TCTGGTTGGGATTCTCTTCT+AGG | 0.232651 | 4_1:-16575149 | Msa0537730:CDS |
| TATCATGTAGAAATATTTAA+TGG | 0.240873 | 4_1:-16575011 | Msa0537730:CDS |
| TCTGCCATGGCGTCGGATTC+TGG | 0.241406 | 4_1:+16569049 | None:intergenic |
| AGCCATTAATGTAGGGTTAT+TGG | 0.241430 | 4_1:+16568505 | None:intergenic |
| ACATGTGATGAAAGAAATAA+TGG | 0.254689 | 4_1:-16575279 | Msa0537730:CDS |
| TCAGAAGAGTTATCAAATTT+AGG | 0.259764 | 4_1:+16568311 | None:intergenic |
| ATTATCCATTTGGTTGAAAA+TGG | 0.263055 | 4_1:-16575527 | Msa0537730:CDS |
| GGCAAAATTAAGTGAGTTAA+AGG | 0.281586 | 4_1:-16568039 | Msa0537730:CDS |
| AATGACTTGAATGCATTATT+GGG | 0.294393 | 4_1:+16574903 | None:intergenic |
| TTTCAGAATTTGTCAACTAT+TGG | 0.305656 | 4_1:-16574756 | Msa0537730:intron |
| TGGCATTATACATGCGTAAA+AGG | 0.321585 | 4_1:+16575411 | None:intergenic |
| AATGGTGCAATGAAATTCAT+AGG | 0.324641 | 4_1:+16568800 | None:intergenic |
| TGAAAATGAAATTATCCATT+TGG | 0.341035 | 4_1:-16575537 | Msa0537730:CDS |
| TTCAATTCACATCAAGCATT+AGG | 0.345187 | 4_1:-16568683 | Msa0537730:CDS |
| GGCTGCATATTGAATTGAAA+TGG | 0.349667 | 4_1:+16575432 | None:intergenic |
| GAATACATACGTTTGTTACT+TGG | 0.350695 | 4_1:+16569211 | None:intergenic |
| TTTGGATGTGGAAGAGCATT+AGG | 0.359877 | 4_1:-16569325 | Msa0537730:CDS |
| TTGTCGGAGCCGGAAGATTA+AGG | 0.360072 | 4_1:+16568267 | None:intergenic |
| CCATGGTTGCAAGTTGGAAT+TGG | 0.363083 | 4_1:-16567987 | Msa0537730:CDS |
| CAAACTTGACCTTAATCTTC+CGG | 0.388092 | 4_1:-16568276 | Msa0537730:CDS |
| AAGCACTAATTCAAAATCTC+AGG | 0.388877 | 4_1:-16575175 | Msa0537730:CDS |
| TATTCAAGAAAGGACTCAAT+TGG | 0.390385 | 4_1:-16574826 | Msa0537730:CDS |
| AAACAACAATAACAACAATA+AGG | 0.396628 | 4_1:-16568756 | Msa0537730:CDS |
| TGTCACAGGAGTTTCTCTTC+AGG | 0.396944 | 4_1:-16568440 | Msa0537730:CDS |
| AATTCGATCTCGTCGCCAAC+AGG | 0.403997 | 4_1:-16575057 | Msa0537730:CDS |
| TTCTCTTCAGGACAAGCATT+AGG | 0.410263 | 4_1:-16568428 | Msa0537730:CDS |
| AAATCTCAGGGACTCTGGTT+GGG | 0.413904 | 4_1:-16575162 | Msa0537730:CDS |
| AGGTCAAGTTTGAGATCAAT+TGG | 0.419542 | 4_1:+16568287 | None:intergenic |
| AATTGAACATTCATGCACTT+TGG | 0.420744 | 4_1:+16568463 | None:intergenic |
| GCTGAGGCACATGATTCTTC+CGG | 0.421597 | 4_1:+16568848 | None:intergenic |
| AGATCTTCTTCTTCACTTGA+AGG | 0.423728 | 4_1:+16568926 | None:intergenic |
| CATAGCATTCAAAATGTCTT+GGG | 0.428870 | 4_1:+16575217 | None:intergenic |
| CCATAGAGCAAGTCACAAAA+AGG | 0.435253 | 4_1:-16568657 | Msa0537730:CDS |
| TCATAGCATTCAAAATGTCT+TGG | 0.439747 | 4_1:+16575216 | None:intergenic |
| AAGTAAATTTGTGTATTTGT+CGG | 0.443913 | 4_1:+16568251 | None:intergenic |
| GATGAAGAAGCCATTAATGT+AGG | 0.452698 | 4_1:+16568497 | None:intergenic |
| TGATGATCCGGCGAGCGATT+GGG | 0.454164 | 4_1:-16569251 | Msa0537730:CDS |
| TCCTCAACAATACTATCATC+AGG | 0.455329 | 4_1:+16568599 | None:intergenic |
| TTCTTCATCTTTGCTAGCTG+AGG | 0.456328 | 4_1:+16568832 | None:intergenic |
| AAGGATGTAATTAACATTGG+TGG | 0.466872 | 4_1:-16568020 | Msa0537730:CDS |
| AAAGATCCGGAGATACTAGA+TGG | 0.471762 | 4_1:-16575460 | Msa0537730:CDS |
| ATGGTGATGGCGTCAGTGGC+AGG | 0.472265 | 4_1:-16569024 | Msa0537730:CDS |
| GCTGCATATTGAATTGAAAT+GGG | 0.473926 | 4_1:+16575433 | None:intergenic |
| GGTGACATTGCAACCGGAAG+AGG | 0.476755 | 4_1:-16575506 | Msa0537730:CDS |
| TGATCCTCTTGAGGTTGAAC+CGG | 0.478585 | 4_1:-16568867 | Msa0537730:CDS |
| ATGATGATCCGGCGAGCGAT+TGG | 0.479445 | 4_1:-16569252 | Msa0537730:CDS |
| GAAAATGGTGACATTGCAAC+CGG | 0.480423 | 4_1:-16575512 | Msa0537730:CDS |
| AAGCGATGAAACAAGTCAAA+TGG | 0.487942 | 4_1:-16569278 | Msa0537730:CDS |
| AAAATCTCAGGGACTCTGGT+TGG | 0.493460 | 4_1:-16575163 | Msa0537730:CDS |
| AACTTGATTAGCCCCTCTTC+CGG | 0.494395 | 4_1:+16575493 | None:intergenic |
| TATCAGGAATTTGAATGAGA+TGG | 0.494639 | 4_1:+16575102 | None:intergenic |
| AAATTTACTTGCAACCAACA+TGG | 0.497835 | 4_1:-16568238 | Msa0537730:CDS |
| GTTGGAACATTACAAAGATC+CGG | 0.499578 | 4_1:-16575473 | Msa0537730:CDS |
| TGCTATTGTTGATCCTCTTG+AGG | 0.500759 | 4_1:-16568876 | Msa0537730:CDS |
| CATGTGATGAAAGAAATAAT+GGG | 0.506527 | 4_1:-16575278 | Msa0537730:CDS |
| GCATTCAAGTCATTTAATGC+TGG | 0.506674 | 4_1:-16574894 | Msa0537730:CDS |
| AATTTACTTGCAACCAACAT+GGG | 0.509114 | 4_1:-16568237 | Msa0537730:CDS |
| AGATGATAGCAAGGTTAAGC+TGG | 0.510318 | 4_1:-16568060 | Msa0537730:CDS |
| ATTCAAAATCTCAGGGACTC+TGG | 0.511330 | 4_1:-16575167 | Msa0537730:CDS |
| AAGGCCAAAGGTGTTGCAAA+AGG | 0.512681 | 4_1:-16568737 | Msa0537730:CDS |
| GGAACTCCATCTAGTATCTC+CGG | 0.513990 | 4_1:+16575454 | None:intergenic |
| GAGGATGTGGCTGGTCGAAA+AGG | 0.514988 | 4_1:-16569000 | Msa0537730:CDS |
| ACATACGTTTGTTACTTGGT+GGG | 0.515314 | 4_1:+16569215 | None:intergenic |
| CCGGCGAGCGATTGGGAAGG+TGG | 0.515356 | 4_1:-16569244 | Msa0537730:CDS |
| AAACAACAACCTTAATGCAT+TGG | 0.516007 | 4_1:-16568102 | Msa0537730:CDS |
| TACATACGTTTGTTACTTGG+TGG | 0.516103 | 4_1:+16569214 | None:intergenic |
| TCAAATGGACGATGATGATC+CGG | 0.517310 | 4_1:-16569263 | Msa0537730:CDS |
| TTAAAGGATGTAATTAACAT+TGG | 0.518467 | 4_1:-16568023 | Msa0537730:CDS |
| AGGTCGATGCGAACTAAAGT+AGG | 0.524376 | 4_1:-16568974 | Msa0537730:CDS |
| GTGGTCACAAGAGATGTCAT+TGG | 0.533236 | 4_1:-16568406 | Msa0537730:CDS |
| TCTTCACCATGGTTGCAAGT+TGG | 0.534611 | 4_1:-16567993 | Msa0537730:CDS |
| CCACCTTCCCAATCGCTCGC+CGG | 0.538021 | 4_1:+16569244 | None:intergenic |
| GGAAGAGGGGCTAATCAAGT+TGG | 0.538857 | 4_1:-16575491 | Msa0537730:CDS |
| GTCAGTGGCAGGAGAGGATG+TGG | 0.539916 | 4_1:-16569013 | Msa0537730:CDS |
| TCAACTCTACAATTTGATCA+TGG | 0.541203 | 4_1:-16568533 | Msa0537730:CDS |
| GTGACATTGCAACCGGAAGA+GGG | 0.542011 | 4_1:-16575505 | Msa0537730:CDS |
| GGTGCAACACTATGAGTTTG+AGG | 0.542028 | 4_1:-16574796 | Msa0537730:CDS |
| AAGAGGATCAACAATAGCAT+TGG | 0.543537 | 4_1:+16568880 | None:intergenic |
| ATGAATGTTCAATTTGTCAC+AGG | 0.545564 | 4_1:-16568454 | Msa0537730:CDS |
| GACGATGGTGATGGCGTCAG+TGG | 0.546521 | 4_1:-16569028 | Msa0537730:CDS |
| CCAATTCCAACTTGCAACCA+TGG | 0.547493 | 4_1:+16567987 | None:intergenic |
| ATGAAGAAGCCATTAATGTA+GGG | 0.551910 | 4_1:+16568498 | None:intergenic |
| CTAGCCAATGTTGATGTGTC+GGG | 0.553643 | 4_1:+16568368 | None:intergenic |
| GGAGGACATATGAGAGCTCA+TGG | 0.556898 | 4_1:-16569304 | Msa0537730:CDS |
| ATTTGTGTATTTGTCGGAGC+CGG | 0.557536 | 4_1:+16568257 | None:intergenic |
| GTGGCTGGTCGAAAAGGAAA+AGG | 0.562748 | 4_1:-16568994 | Msa0537730:CDS |
| CTCTCCAGAATCCGACGCCA+TGG | 0.566778 | 4_1:-16569053 | Msa0537730:CDS |
| TTCTCTTCTAGGAAAAGTCA+AGG | 0.569288 | 4_1:-16575138 | Msa0537730:CDS |
| GCCATCACCATCGTCTGCCA+TGG | 0.569907 | 4_1:+16569036 | None:intergenic |
| ATGGTGCAATGAAATTCATA+GGG | 0.570005 | 4_1:+16568801 | None:intergenic |
| TGGAAATCATTCCTCGAACA+CGG | 0.572286 | 4_1:-16569118 | Msa0537730:CDS |
| CCTAGCCAATGTTGATGTGT+CGG | 0.581613 | 4_1:+16568367 | None:intergenic |
| AATTCACATCAAGCATTAGG+TGG | 0.583717 | 4_1:-16568680 | Msa0537730:CDS |
| GTGGCAGGAGAGGATGTGGC+TGG | 0.584863 | 4_1:-16569009 | Msa0537730:CDS |
| CTTGAATTTGCACCCCATGT+TGG | 0.585693 | 4_1:+16568224 | None:intergenic |
| TGCACCCGACACATCAACAT+TGG | 0.597550 | 4_1:-16568372 | Msa0537730:CDS |
| AGCACTAATTCAAAATCTCA+GGG | 0.599520 | 4_1:-16575174 | Msa0537730:CDS |
| CCGACACATCAACATTGGCT+AGG | 0.600465 | 4_1:-16568367 | Msa0537730:CDS |
| CAACTGTCACAAAGTCCTGT+TGG | 0.603381 | 4_1:+16575042 | None:intergenic |
| ACCATCGTCTGCCATGGCGT+CGG | 0.604106 | 4_1:+16569042 | None:intergenic |
| GGATCGAATGTTGCTCAAAG+AGG | 0.607786 | 4_1:-16575356 | Msa0537730:CDS |
| TCTTCCGGTTCAACCTCAAG+AGG | 0.608243 | 4_1:+16568863 | None:intergenic |
| TGATAATGAAGATGATAGCA+AGG | 0.609766 | 4_1:-16568069 | Msa0537730:CDS |
| CCTCAACAATACTATCATCA+GGG | 0.616413 | 4_1:+16568600 | None:intergenic |
| TGCAAATTCAAGTACAACAA+AGG | 0.619130 | 4_1:-16568213 | Msa0537730:CDS |
| TCTTCAGGACAAGCATTAGG+TGG | 0.619434 | 4_1:-16568425 | Msa0537730:CDS |
| AATAACAACAATAAGGCCAA+AGG | 0.626216 | 4_1:-16568749 | Msa0537730:CDS |
| CCCTGATGATAGTATTGTTG+AGG | 0.628128 | 4_1:-16568600 | Msa0537730:CDS |
| GATGGCGTCAGTGGCAGGAG+AGG | 0.632559 | 4_1:-16569019 | Msa0537730:CDS |
| GGATGTGGAAGAGCATTAGG+AGG | 0.639239 | 4_1:-16569322 | Msa0537730:CDS |
| ATTTACTTGCAACCAACATG+GGG | 0.643546 | 4_1:-16568236 | Msa0537730:CDS |
| GCCATGGCAGACGATGGTGA+TGG | 0.647379 | 4_1:-16569037 | Msa0537730:CDS |
| TCCGACGCCATGGCAGACGA+TGG | 0.647564 | 4_1:-16569043 | Msa0537730:CDS |
| TAGGGAATTCTATAAGACAA+TGG | 0.648546 | 4_1:+16568782 | None:intergenic |
| AAAGGACAACAACATCAAAG+AGG | 0.651093 | 4_1:-16568195 | Msa0537730:CDS |
| GATCCGGCGAGCGATTGGGA+AGG | 0.658250 | 4_1:-16569247 | Msa0537730:CDS |
| TGACATTGCAACCGGAAGAG+GGG | 0.658335 | 4_1:-16575504 | Msa0537730:CDS |
| CATGGCGTCGGATTCTGGAG+AGG | 0.659545 | 4_1:+16569054 | None:intergenic |
| TTGGTGGAAGTTCTTCACCA+TGG | 0.661371 | 4_1:-16568004 | Msa0537730:CDS |
| TTGGTACAACAACTGATGTG+AGG | 0.681780 | 4_1:-16567968 | Msa0537730:CDS |
| AAGGACTCAATTGGAGTACG+AGG | 0.700090 | 4_1:-16574817 | Msa0537730:CDS |
| TGTAGGGTGTGTGAGCATTG+TGG | 0.711110 | 4_1:-16569157 | Msa0537730:CDS |
| AAAATGCAACTCAGATGACG+CGG | 0.742662 | 4_1:-16569095 | Msa0537730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTTTTATAAAAAT+GGG | + | chr4_1:16573199-16573218 | None:intergenic | 0.0% |
| !!! | TATTTTATTTTTTATAAAAA+TGG | + | chr4_1:16573200-16573219 | None:intergenic | 0.0% |
| !!! | ATAAATAGTAGTATTTTATT+TGG | + | chr4_1:16571412-16571431 | None:intergenic | 10.0% |
| !! | GTAATACTAATAATAAAAAT+CGG | - | chr4_1:16571581-16571600 | Msa0537730:intron | 10.0% |
| !! | TAATACTAATAATAAAAATC+GGG | - | chr4_1:16571582-16571601 | Msa0537730:intron | 10.0% |
| !! | ATACTCAAAAAAAATTAAAA+TGG | - | chr4_1:16572248-16572267 | Msa0537730:intron | 10.0% |
| !! | AAAAAAAGAAAAAAAAAGAA+GGG | + | chr4_1:16574056-16574075 | None:intergenic | 10.0% |
| !! | AAAAAAAAGAAAAAAAAAGA+AGG | + | chr4_1:16574057-16574076 | None:intergenic | 10.0% |
| !! | TATCATGTAGAAATATTTAA+TGG | - | chr4_1:16568505-16568524 | Msa0537730:CDS | 15.0% |
| !! | CTATGAAACTTATAAAAATA+AGG | - | chr4_1:16568902-16568921 | Msa0537730:CDS | 15.0% |
| !! | AGATAATTAATGATGAAAAT+AGG | + | chr4_1:16570300-16570319 | None:intergenic | 15.0% |
| !! | AATACTAATAATAAAAATCG+GGG | - | chr4_1:16571583-16571602 | Msa0537730:intron | 15.0% |
| !! | AAAATTAAAATGGATGAAAA+TGG | - | chr4_1:16572258-16572277 | Msa0537730:intron | 15.0% |
| !! | ATTATTTATACGAAAATGTT+TGG | - | chr4_1:16572657-16572676 | Msa0537730:intron | 15.0% |
| !!! | AGAAATATCAAAAACTTTTA+TGG | + | chr4_1:16572798-16572817 | None:intergenic | 15.0% |
| !!! | GTCTTAATGATATTTTATTT+TGG | + | chr4_1:16572830-16572849 | None:intergenic | 15.0% |
| !! | AATAAGTTCAGTAAAATAAA+GGG | + | chr4_1:16573280-16573299 | None:intergenic | 15.0% |
| !! | TAATAAGTTCAGTAAAATAA+AGG | + | chr4_1:16573281-16573300 | None:intergenic | 15.0% |
| !!! | TCTTTATTTTCATATTACTT+TGG | - | chr4_1:16573303-16573322 | Msa0537730:intron | 15.0% |
| !!! | CAATTTTTTTTTTTGAGAAA+AGG | - | chr4_1:16573465-16573484 | Msa0537730:intron | 15.0% |
| !! | AGATGAAAAATGATATAAAT+TGG | - | chr4_1:16573524-16573543 | Msa0537730:intron | 15.0% |
| !! | GATGAAAAATGATATAAATT+GGG | - | chr4_1:16573525-16573544 | Msa0537730:intron | 15.0% |
| !! | AAAAAAGAAAAAAAAAGAAG+GGG | + | chr4_1:16574055-16574074 | None:intergenic | 15.0% |
| !!! | TTTTGTAAAATTTGCAAAAA+AGG | - | chr4_1:16574167-16574186 | Msa0537730:intron | 15.0% |
| !! | TGAAAATGAAATTATCCATT+TGG | - | chr4_1:16567979-16567998 | Msa0537730:CDS | 20.0% |
| !!! | TTTAGTTTTACCTTTAAACT+TGG | - | chr4_1:16569210-16569229 | Msa0537730:CDS | 20.0% |
| !!! | TTGTTAAAATACTTGATGAT+AGG | + | chr4_1:16569742-16569761 | None:intergenic | 20.0% |
| !!! | ACTTTAAAAGCATAAAAATG+AGG | - | chr4_1:16570027-16570046 | Msa0537730:intron | 20.0% |
| !!! | TCAAAAAAATGGATTTTATG+CGG | + | chr4_1:16570176-16570195 | None:intergenic | 20.0% |
| !! | TATAATTGATTAGACAACAT+TGG | + | chr4_1:16570246-16570265 | None:intergenic | 20.0% |
| !!! | TTTTGAGTTTTATGTGAAAT+TGG | + | chr4_1:16570498-16570517 | None:intergenic | 20.0% |
| !! | TATTATGTTAATGTCATGTT+TGG | + | chr4_1:16570539-16570558 | None:intergenic | 20.0% |
| !! | ACATTAACATAATAACTTCA+TGG | - | chr4_1:16570545-16570564 | Msa0537730:intron | 20.0% |
| !! | ATGTAGTCTTTGTAAAAATT+AGG | + | chr4_1:16571049-16571068 | None:intergenic | 20.0% |
| !! | TACATCTTATATATACTCTT+GGG | - | chr4_1:16571064-16571083 | Msa0537730:intron | 20.0% |
| !!! | TTTAAAAGATAAGGGTATTT+TGG | + | chr4_1:16571511-16571530 | None:intergenic | 20.0% |
| !!! | AGTTGCTTTTTAAAAGATAA+GGG | + | chr4_1:16571519-16571538 | None:intergenic | 20.0% |
| !!! | TAGTTGCTTTTTAAAAGATA+AGG | + | chr4_1:16571520-16571539 | None:intergenic | 20.0% |
| !!! | TATGGATCTTATAGATATTT+TGG | + | chr4_1:16571668-16571687 | None:intergenic | 20.0% |
| !! | AAGTTGTTGCAAATTTAAAA+AGG | + | chr4_1:16571738-16571757 | None:intergenic | 20.0% |
| !!! | GAGATTAAAATGATTTTGTA+TGG | + | chr4_1:16571892-16571911 | None:intergenic | 20.0% |
| !!! | GTATTACGAACAATTTTTAA+AGG | - | chr4_1:16572002-16572021 | Msa0537730:intron | 20.0% |
| !!! | TTGATGATTCTTCATTTATA+TGG | - | chr4_1:16572159-16572178 | Msa0537730:intron | 20.0% |
| !! | TCGAAAAAGGATTAATATAT+TGG | + | chr4_1:16572516-16572535 | None:intergenic | 20.0% |
| !!! | TTACATTTTTTCATCGAAAA+AGG | + | chr4_1:16572529-16572548 | None:intergenic | 20.0% |
| !! | TGTACAAATATCTCAAAAAT+CGG | - | chr4_1:16572622-16572641 | Msa0537730:intron | 20.0% |
| !! | AACAATGCATAAAATATACA+AGG | + | chr4_1:16572722-16572741 | None:intergenic | 20.0% |
| !!! | TTTTGACATATTGTATTTTG+TGG | + | chr4_1:16572886-16572905 | None:intergenic | 20.0% |
| !! | TTATTTATGTTTGACTCTTA+AGG | - | chr4_1:16573027-16573046 | Msa0537730:intron | 20.0% |
| !! | AAATAAAGGGAAAATATGAT+GGG | + | chr4_1:16573267-16573286 | None:intergenic | 20.0% |
| !! | AAAATAAAGGGAAAATATGA+TGG | + | chr4_1:16573268-16573287 | None:intergenic | 20.0% |
| !! | AAATGATCAATATATTTGAC+TGG | + | chr4_1:16573333-16573352 | None:intergenic | 20.0% |
| !! | AAAAAGAAAAAAAAAGAAGG+GGG | + | chr4_1:16574054-16574073 | None:intergenic | 20.0% |
| !! | TGGTTATTCTTAAAATTGTA+TGG | - | chr4_1:16574109-16574128 | Msa0537730:intron | 20.0% |
| !! | TAATAAGCTAAAAAGTTGTA+GGG | - | chr4_1:16574343-16574362 | Msa0537730:intron | 20.0% |
| !!! | TTGTTATTGTTGTTTTCATA+GGG | + | chr4_1:16574755-16574774 | None:intergenic | 20.0% |
| !! | AAACAACAATAACAACAATA+AGG | - | chr4_1:16574760-16574779 | Msa0537730:CDS | 20.0% |
| !! | ATTTAGGTATTTGTTCTATT+TGG | + | chr4_1:16575192-16575211 | None:intergenic | 20.0% |
| !! | AAGTAAATTTGTGTATTTGT+CGG | + | chr4_1:16575268-16575287 | None:intergenic | 20.0% |
| !!! | TTTCATTATTTTGATCAACT+AGG | + | chr4_1:16575378-16575397 | None:intergenic | 20.0% |
| !! | TTAAAGGATGTAATTAACAT+TGG | - | chr4_1:16575493-16575512 | Msa0537730:CDS | 20.0% |
| ! | ATTATCCATTTGGTTGAAAA+TGG | - | chr4_1:16567989-16568008 | Msa0537730:CDS | 25.0% |
| !! | TTTTGTTCTTGAAGATTATG+CGG | - | chr4_1:16568132-16568151 | Msa0537730:CDS | 25.0% |
| ! | ACATGTGATGAAAGAAATAA+TGG | - | chr4_1:16568237-16568256 | Msa0537730:CDS | 25.0% |
| ! | CATGTGATGAAAGAAATAAT+GGG | - | chr4_1:16568238-16568257 | Msa0537730:CDS | 25.0% |
| ! | AATGACTTGAATGCATTATT+GGG | + | chr4_1:16568616-16568635 | None:intergenic | 25.0% |
| ! | AAATGACTTGAATGCATTAT+TGG | + | chr4_1:16568617-16568636 | None:intergenic | 25.0% |
| ! | CTTGAATAGAAAAATCTGAA+TGG | + | chr4_1:16568678-16568697 | None:intergenic | 25.0% |
| !! | CAGATTTTTCTATTCAAGAA+AGG | - | chr4_1:16568680-16568699 | Msa0537730:CDS | 25.0% |
| ! | TTTCAGAATTTGTCAACTAT+TGG | - | chr4_1:16568760-16568779 | Msa0537730:CDS | 25.0% |
| ! | TGTCAAAAATTAGTTGAAAC+AGG | - | chr4_1:16568790-16568809 | Msa0537730:CDS | 25.0% |
| ! | GTCAAAAATTAGTTGAAACA+GGG | - | chr4_1:16568791-16568810 | Msa0537730:CDS | 25.0% |
| !! | TGATTTTCTCAAAGATTACA+TGG | - | chr4_1:16568945-16568964 | Msa0537730:CDS | 25.0% |
| ! | ATTGATTATGTGTAACTATG+TGG | + | chr4_1:16569307-16569326 | None:intergenic | 25.0% |
| ! | ATATGCATATATAGTTGAGT+AGG | + | chr4_1:16569401-16569420 | None:intergenic | 25.0% |
| ! | TACTCAACTATATATGCATA+TGG | - | chr4_1:16569400-16569419 | Msa0537730:intron | 25.0% |
| !!! | GTTTTTTACCATCGTTAAAT+TGG | - | chr4_1:16569480-16569499 | Msa0537730:intron | 25.0% |
| ! | ATGAAATGTTAATGCATTCA+TGG | + | chr4_1:16569511-16569530 | None:intergenic | 25.0% |
| ! | TAATGAAGATCATATTACGA+TGG | + | chr4_1:16569580-16569599 | None:intergenic | 25.0% |
| ! | ACTAAATGATGTTGCTATAT+GGG | + | chr4_1:16569698-16569717 | None:intergenic | 25.0% |
| ! | TACTAAATGATGTTGCTATA+TGG | + | chr4_1:16569699-16569718 | None:intergenic | 25.0% |
| ! | AGTAAACTTAGCAATTGAAT+TGG | + | chr4_1:16569911-16569930 | None:intergenic | 25.0% |
| ! | TACTCCTATTAATCAAGTTT+AGG | - | chr4_1:16569973-16569992 | Msa0537730:intron | 25.0% |
| ! | ACTCCTATTAATCAAGTTTA+GGG | - | chr4_1:16569974-16569993 | Msa0537730:intron | 25.0% |
| !! | AAAAGCATAAAAATGAGGTT+TGG | - | chr4_1:16570032-16570051 | Msa0537730:intron | 25.0% |
| ! | CGAAAATAGAGTCAAAAAAA+TGG | + | chr4_1:16570187-16570206 | None:intergenic | 25.0% |
| ! | GAAAATAGGTAGAATTGATT+TGG | + | chr4_1:16570286-16570305 | None:intergenic | 25.0% |
| ! | TGAAAGTTATTGCTAAATTG+TGG | + | chr4_1:16570466-16570485 | None:intergenic | 25.0% |
| ! | TAACATGTTAATGTGACTAT+GGG | + | chr4_1:16570590-16570609 | None:intergenic | 25.0% |
| ! | TTAACATGTTAATGTGACTA+TGG | + | chr4_1:16570591-16570610 | None:intergenic | 25.0% |
| ! | ATGAAATGATGTGGAAATTA+TGG | + | chr4_1:16570615-16570634 | None:intergenic | 25.0% |
| !!! | AAATTGATGATGAAATGATG+TGG | + | chr4_1:16570624-16570643 | None:intergenic | 25.0% |
| ! | TTATTCATCATAACCAAACA+TGG | - | chr4_1:16570684-16570703 | Msa0537730:intron | 25.0% |
| ! | TATTTGATTAAGAGGTAAGA+GGG | + | chr4_1:16570883-16570902 | None:intergenic | 25.0% |
| ! | TTATTTGATTAAGAGGTAAG+AGG | + | chr4_1:16570884-16570903 | None:intergenic | 25.0% |
| ! | AGCTAAGTTATTTGATTAAG+AGG | + | chr4_1:16570891-16570910 | None:intergenic | 25.0% |
| ! | CTACATCTTATATATACTCT+TGG | - | chr4_1:16571063-16571082 | Msa0537730:intron | 25.0% |
| !!! | GAGCATAATTCTTTTATTTG+TGG | + | chr4_1:16571132-16571151 | None:intergenic | 25.0% |
| !!! | TATTTTAGTAATTTGGACGT+GGG | + | chr4_1:16571470-16571489 | None:intergenic | 25.0% |
| !!! | TGAAGGGTATTTTAGTAATT+TGG | + | chr4_1:16571477-16571496 | None:intergenic | 25.0% |
| ! | ATTATTGTGGTTGAATTGAT+GGG | + | chr4_1:16571544-16571563 | None:intergenic | 25.0% |
| ! | TATTATTGTGGTTGAATTGA+TGG | + | chr4_1:16571545-16571564 | None:intergenic | 25.0% |
| ! | TGATTACTTGGAGAAAAATA+TGG | + | chr4_1:16571686-16571705 | None:intergenic | 25.0% |
| ! | ATGTCTTCCAAAATTGAATT+TGG | + | chr4_1:16571782-16571801 | None:intergenic | 25.0% |
| !! | TATCAGAAGAACTAGAATTT+TGG | - | chr4_1:16571959-16571978 | Msa0537730:intron | 25.0% |
| !!! | GAACAATTTTTAAAGGAGTA+CGG | - | chr4_1:16572009-16572028 | Msa0537730:intron | 25.0% |
| !!! | AACAATTTTTAAAGGAGTAC+GGG | - | chr4_1:16572010-16572029 | Msa0537730:intron | 25.0% |
| ! | ATTTATACGAAAATGTTTGG+AGG | - | chr4_1:16572660-16572679 | Msa0537730:intron | 25.0% |
| !!! | AATGTTTGGAGGTATTTTTT+TGG | - | chr4_1:16572671-16572690 | Msa0537730:intron | 25.0% |
| ! | TGCATAAAATATACAAGGTT+CGG | + | chr4_1:16572717-16572736 | None:intergenic | 25.0% |
| !! | AAGACAATCTTTTCAACATA+AGG | - | chr4_1:16572845-16572864 | Msa0537730:intron | 25.0% |
| !!! | TTGATTTTGAGTACCAATTT+TGG | + | chr4_1:16572987-16573006 | None:intergenic | 25.0% |
| ! | AACAAAAAGAAACTTTAGTG+TGG | + | chr4_1:16573071-16573090 | None:intergenic | 25.0% |
| ! | ACTGCTTAATTACTTTAGTA+TGG | + | chr4_1:16573100-16573119 | None:intergenic | 25.0% |
| ! | TAACATTATAAGTCAGATGA+AGG | - | chr4_1:16573408-16573427 | Msa0537730:intron | 25.0% |
| ! | AACATTATAAGTCAGATGAA+GGG | - | chr4_1:16573409-16573428 | Msa0537730:intron | 25.0% |
| ! | AATCCAGTCAAATAAAAGTA+TGG | - | chr4_1:16573432-16573451 | Msa0537730:intron | 25.0% |
| ! | GATAAAAATTTCTTGATCTC+AGG | - | chr4_1:16573487-16573506 | Msa0537730:intron | 25.0% |
| ! | GAAAAATGATATAAATTGGG+TGG | - | chr4_1:16573528-16573547 | Msa0537730:intron | 25.0% |
| ! | TGAAGTGATATGAATAGATA+TGG | - | chr4_1:16573614-16573633 | Msa0537730:intron | 25.0% |
| !!! | TTAGTTGGAGTATTGATTTA+TGG | + | chr4_1:16573866-16573885 | None:intergenic | 25.0% |
| ! | TTTGTATGGTGAACTAATTA+AGG | + | chr4_1:16573906-16573925 | None:intergenic | 25.0% |
| ! | AAAAGAAAAAAAAAGAAGGG+GGG | + | chr4_1:16574053-16574072 | None:intergenic | 25.0% |
| ! | AAAATTTGCAAAAAAGGCTT+TGG | - | chr4_1:16574173-16574192 | Msa0537730:intron | 25.0% |
| !!! | CTACAACTTTTTAGCTTATT+AGG | + | chr4_1:16574344-16574363 | None:intergenic | 25.0% |
| ! | CTAATAAGCTAAAAAGTTGT+AGG | - | chr4_1:16574342-16574361 | Msa0537730:intron | 25.0% |
| !!! | GTTGTTATTGTTGTTTTCAT+AGG | + | chr4_1:16574756-16574775 | None:intergenic | 25.0% |
| ! | TCAGAAGAGTTATCAAATTT+AGG | + | chr4_1:16575208-16575227 | None:intergenic | 25.0% |
| !!! | GGTTTTTGTTTTGATTTTGT+TGG | + | chr4_1:16575357-16575376 | None:intergenic | 25.0% |
| GCTGCATATTGAATTGAAAT+GGG | + | chr4_1:16568086-16568105 | None:intergenic | 30.0% | |
| ATCTTCAAGAACAAAAACAG+TGG | + | chr4_1:16568128-16568147 | None:intergenic | 30.0% | |
| CATAGCATTCAAAATGTCTT+GGG | + | chr4_1:16568302-16568321 | None:intergenic | 30.0% | |
| TCATAGCATTCAAAATGTCT+TGG | + | chr4_1:16568303-16568322 | None:intergenic | 30.0% | |
| AAGCACTAATTCAAAATCTC+AGG | - | chr4_1:16568341-16568360 | Msa0537730:CDS | 30.0% | |
| AGCACTAATTCAAAATCTCA+GGG | - | chr4_1:16568342-16568361 | Msa0537730:CDS | 30.0% | |
| TATCAGGAATTTGAATGAGA+TGG | + | chr4_1:16568417-16568436 | None:intergenic | 30.0% | |
| GAAAAAGAAGAACTCATATC+AGG | + | chr4_1:16568433-16568452 | None:intergenic | 30.0% | |
| TATTCAAGAAAGGACTCAAT+TGG | - | chr4_1:16568690-16568709 | Msa0537730:CDS | 30.0% | |
| GGTTGTTTATATTGAAGATG+AGG | - | chr4_1:16568966-16568985 | Msa0537730:CDS | 30.0% | |
| GAATACAACTTCAGATGTAA+TGG | - | chr4_1:16569049-16569068 | Msa0537730:CDS | 30.0% | |
| GAAAATATGTGATTTGACGA+TGG | + | chr4_1:16569285-16569304 | None:intergenic | 30.0% | |
| CTAAATGATGTTGCTATATG+GGG | + | chr4_1:16569697-16569716 | None:intergenic | 30.0% | |
| GATGTATATCAATGTGTTTG+AGG | + | chr4_1:16569805-16569824 | None:intergenic | 30.0% | |
| GTAATTAACCTAGCTTACAA+TGG | + | chr4_1:16569935-16569954 | None:intergenic | 30.0% | |
| CTCCTATTAATCAAGTTTAG+GGG | - | chr4_1:16569975-16569994 | Msa0537730:intron | 30.0% | |
| AACCCCTAAACTTGATTAAT+AGG | + | chr4_1:16569980-16569999 | None:intergenic | 30.0% | |
| !!! | ATGCTTTTAAAGTGTATCCA+AGG | + | chr4_1:16570020-16570039 | None:intergenic | 30.0% |
| CAACATTGGTATGATGATTT+GGG | + | chr4_1:16570232-16570251 | None:intergenic | 30.0% | |
| ACAACATTGGTATGATGATT+TGG | + | chr4_1:16570233-16570252 | None:intergenic | 30.0% | |
| !! | AGGTAGAATTGATTTGGTTA+AGG | + | chr4_1:16570280-16570299 | None:intergenic | 30.0% |
| ! | TTGTTGTTGTTGCTATGTTT+GGG | + | chr4_1:16570384-16570403 | None:intergenic | 30.0% |
| AATTATGCTCTTTACCCAAA+TGG | - | chr4_1:16571142-16571161 | Msa0537730:intron | 30.0% | |
| ! | GCATTTTGGACTTTTACTTT+GGG | + | chr4_1:16571352-16571371 | None:intergenic | 30.0% |
| ! | GCATTTTGGACTTTTACTTT+GGG | - | chr4_1:16571352-16571371 | Msa0537730:intron | 30.0% |
| !! | ATTTTAGTAATTTGGACGTG+GGG | + | chr4_1:16571469-16571488 | None:intergenic | 30.0% |
| !!! | GTATTTTAGTAATTTGGACG+TGG | + | chr4_1:16571471-16571490 | None:intergenic | 30.0% |
| ! | TTTGGTAATCTAAGAGTGAA+GGG | + | chr4_1:16571493-16571512 | None:intergenic | 30.0% |
| !! | TTTTGGTAATCTAAGAGTGA+AGG | + | chr4_1:16571494-16571513 | None:intergenic | 30.0% |
| TCTTCCAAAATTGAATTTGG+AGG | + | chr4_1:16571779-16571798 | None:intergenic | 30.0% | |
| !! | ACAATTTTTAAAGGAGTACG+GGG | - | chr4_1:16572011-16572030 | Msa0537730:intron | 30.0% |
| ! | TTCATTTATATGGATTGCGT+TGG | - | chr4_1:16572169-16572188 | Msa0537730:intron | 30.0% |
| TATAGTATTGTGTTCATGCT+TGG | - | chr4_1:16572391-16572410 | Msa0537730:intron | 30.0% | |
| !!! | GGTATTTTTTTGGTGATAAC+CGG | - | chr4_1:16572681-16572700 | Msa0537730:intron | 30.0% |
| CATAAAATATACAAGGTTCG+GGG | + | chr4_1:16572715-16572734 | None:intergenic | 30.0% | |
| GCATAAAATATACAAGGTTC+GGG | + | chr4_1:16572716-16572735 | None:intergenic | 30.0% | |
| !! | ATTTTGAGTACCAATTTTGG+AGG | + | chr4_1:16572984-16573003 | None:intergenic | 30.0% |
| !!! | AACTTTAGTGTGGTTTTGAT+TGG | + | chr4_1:16573061-16573080 | None:intergenic | 30.0% |
| AGCAAGAGTAATTCAGTAAA+GGG | + | chr4_1:16573126-16573145 | None:intergenic | 30.0% | |
| AAGCAAGAGTAATTCAGTAA+AGG | + | chr4_1:16573127-16573146 | None:intergenic | 30.0% | |
| CAATTATCATTCTTCTTGCT+TGG | + | chr4_1:16573166-16573185 | None:intergenic | 30.0% | |
| !! | TGTCCATACTTTTATTTGAC+TGG | + | chr4_1:16573438-16573457 | None:intergenic | 30.0% |
| !! | ATCACTTCAATTCTAAAGCA+AGG | + | chr4_1:16573603-16573622 | None:intergenic | 30.0% |
| ATTTCTCATAGAAACACCTT+TGG | - | chr4_1:16573730-16573749 | Msa0537730:intron | 30.0% | |
| TGTATGTCAAAGATTACCAA+AGG | + | chr4_1:16573749-16573768 | None:intergenic | 30.0% | |
| CAATACTCCAACTAAAAACT+AGG | - | chr4_1:16573871-16573890 | Msa0537730:intron | 30.0% | |
| !!! | TAGTAGTCCTAGTTTTTAGT+TGG | + | chr4_1:16573881-16573900 | None:intergenic | 30.0% |
| TTGTAGTGATAGTTGTTGAA+GGG | + | chr4_1:16573929-16573948 | None:intergenic | 30.0% | |
| TTTAGAGAGAGTTTCATAGA+TGG | + | chr4_1:16574001-16574020 | None:intergenic | 30.0% | |
| ! | TTTTACACCATTCAACATAG+TGG | - | chr4_1:16574089-16574108 | Msa0537730:intron | 30.0% |
| AGAATAACCACTATGTTGAA+TGG | + | chr4_1:16574099-16574118 | None:intergenic | 30.0% | |
| !! | AAATTGTATGGCTTTGATTG+TGG | - | chr4_1:16574121-16574140 | Msa0537730:intron | 30.0% |
| ! | GAATACATACGTTTGTTACT+TGG | + | chr4_1:16574308-16574327 | None:intergenic | 30.0% |
| !!! | GTGGCAAAGAATTTTTTTCT+TGG | - | chr4_1:16574378-16574397 | Msa0537730:intron | 30.0% |
| ATGGTGCAATGAAATTCATA+GGG | + | chr4_1:16574718-16574737 | None:intergenic | 30.0% | |
| AATGGTGCAATGAAATTCAT+AGG | + | chr4_1:16574719-16574738 | None:intergenic | 30.0% | |
| TAGGGAATTCTATAAGACAA+TGG | + | chr4_1:16574737-16574756 | None:intergenic | 30.0% | |
| AATAACAACAATAAGGCCAA+AGG | - | chr4_1:16574767-16574786 | Msa0537730:CDS | 30.0% | |
| TTCAATTCACATCAAGCATT+AGG | - | chr4_1:16574833-16574852 | Msa0537730:CDS | 30.0% | |
| !! | AGAGTTGAGTTTGATTTTGA+AGG | + | chr4_1:16574971-16574990 | None:intergenic | 30.0% |
| TCAACTCTACAATTTGATCA+TGG | - | chr4_1:16574983-16575002 | Msa0537730:CDS | 30.0% | |
| TTCCAATAACCCTACATTAA+TGG | - | chr4_1:16575009-16575028 | Msa0537730:CDS | 30.0% | |
| ATGAAGAAGCCATTAATGTA+GGG | + | chr4_1:16575021-16575040 | None:intergenic | 30.0% | |
| AATTGAACATTCATGCACTT+TGG | + | chr4_1:16575056-16575075 | None:intergenic | 30.0% | |
| ATGAATGTTCAATTTGTCAC+AGG | - | chr4_1:16575062-16575081 | Msa0537730:CDS | 30.0% | |
| AAATTTACTTGCAACCAACA+TGG | - | chr4_1:16575278-16575297 | Msa0537730:CDS | 30.0% | |
| AATTTACTTGCAACCAACAT+GGG | - | chr4_1:16575279-16575298 | Msa0537730:CDS | 30.0% | |
| TGCAAATTCAAGTACAACAA+AGG | - | chr4_1:16575303-16575322 | Msa0537730:CDS | 30.0% | |
| AAACAACAACCTTAATGCAT+TGG | - | chr4_1:16575414-16575433 | Msa0537730:CDS | 30.0% | |
| ! | CATTTTGTACCAATGCATTA+AGG | + | chr4_1:16575426-16575445 | None:intergenic | 30.0% |
| ! | TGATAATGAAGATGATAGCA+AGG | - | chr4_1:16575447-16575466 | Msa0537730:CDS | 30.0% |
| GGCAAAATTAAGTGAGTTAA+AGG | - | chr4_1:16575477-16575496 | Msa0537730:CDS | 30.0% | |
| AAGGATGTAATTAACATTGG+TGG | - | chr4_1:16575496-16575515 | Msa0537730:CDS | 30.0% | |
| ! | TGTCACCATTTTCAACCAAA+TGG | + | chr4_1:16567997-16568016 | None:intergenic | 35.0% |
| GTTGGAACATTACAAAGATC+CGG | - | chr4_1:16568043-16568062 | Msa0537730:CDS | 35.0% | |
| GGCTGCATATTGAATTGAAA+TGG | + | chr4_1:16568087-16568106 | None:intergenic | 35.0% | |
| TGGCATTATACATGCGTAAA+AGG | + | chr4_1:16568108-16568127 | None:intergenic | 35.0% | |
| CTTGAAGATTATGCGGTTAA+AGG | - | chr4_1:16568139-16568158 | Msa0537730:CDS | 35.0% | |
| ! | TTCTCTTCTAGGAAAAGTCA+AGG | - | chr4_1:16568378-16568397 | Msa0537730:CDS | 35.0% |
| GCATTCAAGTCATTTAATGC+TGG | - | chr4_1:16568622-16568641 | Msa0537730:CDS | 35.0% | |
| ! | ATCTGAAGTTGTATTCGTCA+TGG | + | chr4_1:16569045-16569064 | None:intergenic | 35.0% |
| ! | ATATGCATATGGTACCGTTT+TGG | - | chr4_1:16569411-16569430 | Msa0537730:intron | 35.0% |
| CATACCTCTGATATCCAAAA+CGG | + | chr4_1:16569428-16569447 | None:intergenic | 35.0% | |
| TGGTCATTCCAATTTAACGA+TGG | + | chr4_1:16569491-16569510 | None:intergenic | 35.0% | |
| ! | CTTGATGATAGGATGATATG+AGG | + | chr4_1:16569731-16569750 | None:intergenic | 35.0% |
| GTTTACTTCCATTGTAAGCT+AGG | - | chr4_1:16569924-16569943 | Msa0537730:intron | 35.0% | |
| TGTATCCAAGGTATGTGTTT+AGG | + | chr4_1:16570008-16570027 | None:intergenic | 35.0% | |
| AAAATGAGGTTTGGAAACAC+AGG | - | chr4_1:16570041-16570060 | Msa0537730:intron | 35.0% | |
| AAATGAGGTTTGGAAACACA+GGG | - | chr4_1:16570042-16570061 | Msa0537730:intron | 35.0% | |
| !! | GTTTGGGTGTTGAATTAACA+TGG | + | chr4_1:16570368-16570387 | None:intergenic | 35.0% |
| ! | GTTGTTGTTGTTGCTATGTT+TGG | + | chr4_1:16570385-16570404 | None:intergenic | 35.0% |
| !!! | TTTTGAGCTTTGAGCTTGAA+TGG | + | chr4_1:16570660-16570679 | None:intergenic | 35.0% |
| GTTGTGTGAAAATCCATGTT+TGG | + | chr4_1:16570700-16570719 | None:intergenic | 35.0% | |
| TATGAGACTTACGAGCAATT+GGG | + | chr4_1:16570844-16570863 | None:intergenic | 35.0% | |
| ATATGAGACTTACGAGCAAT+TGG | + | chr4_1:16570845-16570864 | None:intergenic | 35.0% | |
| AATTGCTCGTAAGTCTCATA+TGG | - | chr4_1:16570844-16570863 | Msa0537730:intron | 35.0% | |
| TTGTCTCTTTCTCCAAAATG+TGG | - | chr4_1:16571008-16571027 | Msa0537730:intron | 35.0% | |
| ! | AGAGCTCATTTACCACATTT+TGG | + | chr4_1:16571023-16571042 | None:intergenic | 35.0% |
| CTTATATATACTCTTGGGCT+TGG | - | chr4_1:16571069-16571088 | Msa0537730:intron | 35.0% | |
| ! | GGCATTTTGGACTTTTACTT+TGG | + | chr4_1:16571351-16571370 | None:intergenic | 35.0% |
| TGTATTCTGAACGTGACTTA+AGG | - | chr4_1:16571275-16571294 | Msa0537730:intron | 35.0% | |
| ! | GGCATTTTGGACTTTTACTT+TGG | - | chr4_1:16571351-16571370 | Msa0537730:intron | 35.0% |
| ! | TTTTAGTAATTTGGACGTGG+GGG | + | chr4_1:16571468-16571487 | None:intergenic | 35.0% |
| GGTATCAAGCTATGAAAACT+CGG | + | chr4_1:16571647-16571666 | None:intergenic | 35.0% | |
| CAAAATTGAATTTGGAGGCT+AGG | + | chr4_1:16571774-16571793 | None:intergenic | 35.0% | |
| ! | CTAGCCTCCAAATTCAATTT+TGG | - | chr4_1:16571772-16571791 | Msa0537730:intron | 35.0% |
| ! | CAGAAGAACTAGAATTTTGG+AGG | - | chr4_1:16571962-16571981 | Msa0537730:intron | 35.0% |
| TTCATTCATTCTCGATCGAT+CGG | + | chr4_1:16572206-16572225 | None:intergenic | 35.0% | |
| CCTTGTCAATTTCATGTCTA+TGG | + | chr4_1:16572297-16572316 | None:intergenic | 35.0% | |
| CCATAGACATGAAATTGACA+AGG | - | chr4_1:16572294-16572313 | Msa0537730:intron | 35.0% | |
| TTAGTTAAGACCATGAAGGA+AGG | + | chr4_1:16572355-16572374 | None:intergenic | 35.0% | |
| ACAGTTAGTTAAGACCATGA+AGG | + | chr4_1:16572359-16572378 | None:intergenic | 35.0% | |
| ! | ATTGACTCAATGCACATACT+GGG | - | chr4_1:16572436-16572455 | Msa0537730:intron | 35.0% |
| AACTCACGAAGACAAATGTT+TGG | - | chr4_1:16572758-16572777 | Msa0537730:intron | 35.0% | |
| CAAGAGTAATTCAGTAAAGG+GGG | + | chr4_1:16573124-16573143 | None:intergenic | 35.0% | |
| GCAAGAGTAATTCAGTAAAG+GGG | + | chr4_1:16573125-16573144 | None:intergenic | 35.0% | |
| CTTGCTTACTATATGCTTTG+AGG | - | chr4_1:16573140-16573159 | Msa0537730:intron | 35.0% | |
| AATGTCCACACTAAAGTTTG+TGG | - | chr4_1:16573230-16573249 | Msa0537730:intron | 35.0% | |
| AATGTCCACAAACTTTAGTG+TGG | + | chr4_1:16573238-16573257 | None:intergenic | 35.0% | |
| !! | AGACTTTTTCTACGACTCTA+AGG | + | chr4_1:16573781-16573800 | None:intergenic | 35.0% |
| GAGAATTAGTGACAAGTGTA+AGG | + | chr4_1:16573807-16573826 | None:intergenic | 35.0% | |
| TAGTTGTTGAAGGGTTTGTA+TGG | + | chr4_1:16573920-16573939 | None:intergenic | 35.0% | |
| CTTGTAGTGATAGTTGTTGA+AGG | + | chr4_1:16573930-16573949 | None:intergenic | 35.0% | |
| TTGAAGAATGAAGCACAAGA+TGG | + | chr4_1:16573961-16573980 | None:intergenic | 35.0% | |
| AAGCGATGAAACAAGTCAAA+TGG | - | chr4_1:16574238-16574257 | Msa0537730:intron | 35.0% | |
| ! | ACATACGTTTGTTACTTGGT+GGG | + | chr4_1:16574304-16574323 | None:intergenic | 35.0% |
| ! | TACATACGTTTGTTACTTGG+TGG | + | chr4_1:16574305-16574324 | None:intergenic | 35.0% |
| AGATCTTCTTCTTCACTTGA+AGG | + | chr4_1:16574593-16574612 | None:intergenic | 35.0% | |
| AAGAGGATCAACAATAGCAT+TGG | + | chr4_1:16574639-16574658 | None:intergenic | 35.0% | |
| ! | TAATCCTTTTGCAACACCTT+TGG | + | chr4_1:16574786-16574805 | None:intergenic | 35.0% |
| AATTCACATCAAGCATTAGG+TGG | - | chr4_1:16574836-16574855 | Msa0537730:CDS | 35.0% | |
| AGCAAGTCACAAAAAGGTTA+AGG | - | chr4_1:16574865-16574884 | Msa0537730:CDS | 35.0% | |
| GCAAGTCACAAAAAGGTTAA+GGG | - | chr4_1:16574866-16574885 | Msa0537730:CDS | 35.0% | |
| CCTCAACAATACTATCATCA+GGG | + | chr4_1:16574919-16574938 | None:intergenic | 35.0% | |
| TCCTCAACAATACTATCATC+AGG | + | chr4_1:16574920-16574939 | None:intergenic | 35.0% | |
| AGCCATTAATGTAGGGTTAT+TGG | + | chr4_1:16575014-16575033 | None:intergenic | 35.0% | |
| GATGAAGAAGCCATTAATGT+AGG | + | chr4_1:16575022-16575041 | None:intergenic | 35.0% | |
| ! | ATGCACTTTGGATTTTCTCT+TGG | + | chr4_1:16575044-16575063 | None:intergenic | 35.0% |
| ! | AGGTCAAGTTTGAGATCAAT+TGG | + | chr4_1:16575232-16575251 | None:intergenic | 35.0% |
| CAAACTTGACCTTAATCTTC+CGG | - | chr4_1:16575240-16575259 | Msa0537730:CDS | 35.0% | |
| ATTTACTTGCAACCAACATG+GGG | - | chr4_1:16575280-16575299 | Msa0537730:CDS | 35.0% | |
| AAAGGACAACAACATCAAAG+AGG | - | chr4_1:16575321-16575340 | Msa0537730:CDS | 35.0% | |
| GAAAATGGTGACATTGCAAC+CGG | - | chr4_1:16568004-16568023 | Msa0537730:CDS | 40.0% | |
| AAAGATCCGGAGATACTAGA+TGG | - | chr4_1:16568056-16568075 | Msa0537730:CDS | 40.0% | |
| ATTCAAAATCTCAGGGACTC+TGG | - | chr4_1:16568349-16568368 | Msa0537730:CDS | 40.0% | |
| ! | TGGAGCACTCTATCAATCAA+TGG | + | chr4_1:16568832-16568851 | None:intergenic | 40.0% |
| CAGGAAGAGTCAAAACAAGT+TGG | + | chr4_1:16568852-16568871 | None:intergenic | 40.0% | |
| ! | TGGTGATGAAACGTGAATCA+GGG | + | chr4_1:16569265-16569284 | None:intergenic | 40.0% |
| ! | ATGGTGATGAAACGTGAATC+AGG | + | chr4_1:16569266-16569285 | None:intergenic | 40.0% |
| TGAGACCTAAACACATACCT+TGG | - | chr4_1:16570000-16570019 | Msa0537730:intron | 40.0% | |
| ACAGGGAAAAACACACTTTC+AGG | - | chr4_1:16570059-16570078 | Msa0537730:intron | 40.0% | |
| GGAAACCAGAGAAAAACACA+TGG | - | chr4_1:16570080-16570099 | Msa0537730:intron | 40.0% | |
| ! | ATGATGATTTGGGTCGAGTT+TGG | + | chr4_1:16570222-16570241 | None:intergenic | 40.0% |
| ACGAGCAATTGGGTAGTTAT+GGG | + | chr4_1:16570834-16570853 | None:intergenic | 40.0% | |
| TACGAGCAATTGGGTAGTTA+TGG | + | chr4_1:16570835-16570854 | None:intergenic | 40.0% | |
| GTTCAAGAAGCAAATGCAAG+AGG | + | chr4_1:16570936-16570955 | None:intergenic | 40.0% | |
| GGAGAAAGAGACAAGAATAG+AGG | + | chr4_1:16571002-16571021 | None:intergenic | 40.0% | |
| GCTTGGTTCACTTACACTAA+CGG | - | chr4_1:16571086-16571105 | Msa0537730:intron | 40.0% | |
| CTTGGTTCACTTACACTAAC+GGG | - | chr4_1:16571087-16571106 | Msa0537730:intron | 40.0% | |
| ! | TACGCATGTTAAGTTGCGTA+GGG | - | chr4_1:16571329-16571348 | Msa0537730:intron | 40.0% |
| TGGGAGTGAGCAAAACTATT+TGG | - | chr4_1:16571371-16571390 | Msa0537730:intron | 40.0% | |
| GGGAGTGAGCAAAACTATTT+GGG | - | chr4_1:16571372-16571391 | Msa0537730:intron | 40.0% | |
| AAGCTATGAAAACTCGGAGA+TGG | + | chr4_1:16571641-16571660 | None:intergenic | 40.0% | |
| GCTGATTGCATCTGATTACT+TGG | + | chr4_1:16571698-16571717 | None:intergenic | 40.0% | |
| AGTAATCAGATGCAATCAGC+TGG | - | chr4_1:16571698-16571717 | Msa0537730:intron | 40.0% | |
| GTAATCAGATGCAATCAGCT+GGG | - | chr4_1:16571699-16571718 | Msa0537730:intron | 40.0% | |
| ! | TGTGTGTGTTTCTAAACCCA+GGG | + | chr4_1:16572123-16572142 | None:intergenic | 40.0% |
| TGCTATTCTACCACTAAGCT+AGG | - | chr4_1:16572320-16572339 | Msa0537730:intron | 40.0% | |
| ! | GATTGACTCAATGCACATAC+TGG | - | chr4_1:16572435-16572454 | Msa0537730:intron | 40.0% |
| AAGGTTCGGGGTTAAAATTC+CGG | + | chr4_1:16572703-16572722 | None:intergenic | 40.0% | |
| TCACGAAGACAAATGTTTGG+AGG | - | chr4_1:16572761-16572780 | Msa0537730:intron | 40.0% | |
| !!! | TAGTGTGGTTTTGATTGGCT+TGG | + | chr4_1:16573056-16573075 | None:intergenic | 40.0% |
| AGAAACATTAACCAACCGAC+AGG | - | chr4_1:16573554-16573573 | Msa0537730:intron | 40.0% | |
| ATTAAGGACTGAGAAGTGAG+TGG | + | chr4_1:16573649-16573668 | None:intergenic | 40.0% | |
| AGAGTTTCATAGATGGAAGG+TGG | + | chr4_1:16573994-16574013 | None:intergenic | 40.0% | |
| GAGAGAGTTTCATAGATGGA+AGG | + | chr4_1:16573997-16574016 | None:intergenic | 40.0% | |
| !! | TGCAAAAAAGGCTTTGGATG+TGG | - | chr4_1:16574179-16574198 | Msa0537730:intron | 40.0% |
| !! | TTTGGATGTGGAAGAGCATT+AGG | - | chr4_1:16574191-16574210 | Msa0537730:intron | 40.0% |
| TCAAATGGACGATGATGATC+CGG | - | chr4_1:16574253-16574272 | Msa0537730:intron | 40.0% | |
| TGGAAATCATTCCTCGAACA+CGG | - | chr4_1:16574398-16574417 | Msa0537730:intron | 40.0% | |
| AAAATGCAACTCAGATGACG+CGG | - | chr4_1:16574421-16574440 | Msa0537730:intron | 40.0% | |
| TGCTATTGTTGATCCTCTTG+AGG | - | chr4_1:16574640-16574659 | Msa0537730:intron | 40.0% | |
| TTCTTCATCTTTGCTAGCTG+AGG | + | chr4_1:16574687-16574706 | None:intergenic | 40.0% | |
| !!! | CCTTTTTGTGACTTGCTCTA+TGG | + | chr4_1:16574862-16574881 | None:intergenic | 40.0% |
| CCATAGAGCAAGTCACAAAA+AGG | - | chr4_1:16574859-16574878 | Msa0537730:CDS | 40.0% | |
| ! | TTAAGGGATGTTTTGCTGCA+AGG | - | chr4_1:16574882-16574901 | Msa0537730:CDS | 40.0% |
| CCCTGATGATAGTATTGTTG+AGG | - | chr4_1:16574916-16574935 | Msa0537730:CDS | 40.0% | |
| TTCTCTTCAGGACAAGCATT+AGG | - | chr4_1:16575088-16575107 | Msa0537730:CDS | 40.0% | |
| ATTTGTGTATTTGTCGGAGC+CGG | + | chr4_1:16575262-16575281 | None:intergenic | 40.0% | |
| AGATGATAGCAAGGTTAAGC+TGG | - | chr4_1:16575456-16575475 | Msa0537730:CDS | 40.0% | |
| TTGGTACAACAACTGATGTG+AGG | - | chr4_1:16575548-16575567 | Msa0537730:CDS | 40.0% | |
| ! | AACTTGATTAGCCCCTCTTC+CGG | + | chr4_1:16568026-16568045 | None:intergenic | 45.0% |
| GGAACTCCATCTAGTATCTC+CGG | + | chr4_1:16568065-16568084 | None:intergenic | 45.0% | |
| GGATCGAATGTTGCTCAAAG+AGG | - | chr4_1:16568160-16568179 | Msa0537730:CDS | 45.0% | |
| AAAATCTCAGGGACTCTGGT+TGG | - | chr4_1:16568353-16568372 | Msa0537730:CDS | 45.0% | |
| AAATCTCAGGGACTCTGGTT+GGG | - | chr4_1:16568354-16568373 | Msa0537730:CDS | 45.0% | |
| TCTGGTTGGGATTCTCTTCT+AGG | - | chr4_1:16568367-16568386 | Msa0537730:CDS | 45.0% | |
| CAACTGTCACAAAGTCCTGT+TGG | + | chr4_1:16568477-16568496 | None:intergenic | 45.0% | |
| AAGGACTCAATTGGAGTACG+AGG | - | chr4_1:16568699-16568718 | Msa0537730:CDS | 45.0% | |
| GGTGCAACACTATGAGTTTG+AGG | - | chr4_1:16568720-16568739 | Msa0537730:CDS | 45.0% | |
| ! | CGTTCTGTTGTTGTTGACAC+AGG | + | chr4_1:16568871-16568890 | None:intergenic | 45.0% |
| ATCGGTGGGACCAAGTTTAA+AGG | + | chr4_1:16569223-16569242 | None:intergenic | 45.0% | |
| GGCAGGATTTAAACATCGGT+GGG | + | chr4_1:16569237-16569256 | None:intergenic | 45.0% | |
| AGGCAGGATTTAAACATCGG+TGG | + | chr4_1:16569238-16569257 | None:intergenic | 45.0% | |
| CGGAGGCAGGATTTAAACAT+CGG | + | chr4_1:16569241-16569260 | None:intergenic | 45.0% | |
| GGTGATGAAACGTGAATCAG+GGG | + | chr4_1:16569264-16569283 | None:intergenic | 45.0% | |
| !! | GGTACCGTTTTGGATATCAG+AGG | - | chr4_1:16569421-16569440 | Msa0537730:intron | 45.0% |
| ! | ACGGACCATGTGTTTTTCTC+TGG | + | chr4_1:16570088-16570107 | None:intergenic | 45.0% |
| ! | AAACACATGGTCCGTGCTTT+TGG | - | chr4_1:16570093-16570112 | Msa0537730:intron | 45.0% |
| ! | AACACATGGTCCGTGCTTTT+GGG | - | chr4_1:16570094-16570113 | Msa0537730:intron | 45.0% |
| CACATTTGTGCGTATTCTGC+AGG | - | chr4_1:16570120-16570139 | Msa0537730:intron | 45.0% | |
| ! | CATGCTCTAGTTGTTGTTGC+TGG | + | chr4_1:16570758-16570777 | None:intergenic | 45.0% |
| GAGGAGATCTAGAGAGGAAA+AGG | + | chr4_1:16570965-16570984 | None:intergenic | 45.0% | |
| GAGAAAGAGGAGATCTAGAG+AGG | + | chr4_1:16570971-16570990 | None:intergenic | 45.0% | |
| GACAAGAATAGAGGCTAGAG+AGG | + | chr4_1:16570993-16571012 | None:intergenic | 45.0% | |
| GGGAGTGAGCAAAACCATTT+GGG | + | chr4_1:16571159-16571178 | None:intergenic | 45.0% | |
| TGGGAGTGAGCAAAACCATT+TGG | + | chr4_1:16571160-16571179 | None:intergenic | 45.0% | |
| !!! | TAAGTTGCGTAGGGGCATTT+TGG | + | chr4_1:16571338-16571357 | None:intergenic | 45.0% |
| ! | AGCGCATGTTAAGTTGCGTA+GGG | + | chr4_1:16571202-16571221 | None:intergenic | 45.0% |
| ! | TAGCGCATGTTAAGTTGCGT+AGG | + | chr4_1:16571203-16571222 | None:intergenic | 45.0% |
| ! | CTACGCATGTTAAGTTGCGT+AGG | - | chr4_1:16571328-16571347 | Msa0537730:intron | 45.0% |
| ! | ACGCATGTTAAGTTGCGTAG+GGG | - | chr4_1:16571330-16571349 | Msa0537730:intron | 45.0% |
| !!! | TAAGTTGCGTAGGGGCATTT+TGG | - | chr4_1:16571338-16571357 | Msa0537730:intron | 45.0% |
| AGTCAACTGCGAACAAGCTT+CGG | - | chr4_1:16571843-16571862 | Msa0537730:intron | 45.0% | |
| ! | TTTAAAGGAGTACGGGGACT+AGG | - | chr4_1:16572017-16572036 | Msa0537730:intron | 45.0% |
| AGGCTCTTAGATTCAGTCAG+AGG | - | chr4_1:16572047-16572066 | Msa0537730:intron | 45.0% | |
| CTCTTAGATTCAGTCAGAGG+TGG | - | chr4_1:16572050-16572069 | Msa0537730:intron | 45.0% | |
| ! | TGTGTGTTTCTAAACCCAGG+GGG | + | chr4_1:16572121-16572140 | None:intergenic | 45.0% |
| ! | GTGTGTGTTTCTAAACCCAG+GGG | + | chr4_1:16572122-16572141 | None:intergenic | 45.0% |
| ! | GTGTGTGTGTTTCTAAACCC+AGG | + | chr4_1:16572124-16572143 | None:intergenic | 45.0% |
| GCAAATGCTACCTAGCTTAG+TGG | + | chr4_1:16572333-16572352 | None:intergenic | 45.0% | |
| GTAGCATTTGCCTTCCTTCA+TGG | - | chr4_1:16572342-16572361 | Msa0537730:intron | 45.0% | |
| GGAGGACTCATCCTCTTTAA+TGG | + | chr4_1:16572966-16572985 | None:intergenic | 45.0% | |
| GAGGATGAGTCCTCCAAAAT+TGG | - | chr4_1:16572971-16572990 | Msa0537730:intron | 45.0% | |
| CTATGTTTCTCCTTGCCTGT+CGG | + | chr4_1:16573572-16573591 | None:intergenic | 45.0% | |
| GTTTCATAGATGGAAGGTGG+TGG | + | chr4_1:16573991-16574010 | None:intergenic | 45.0% | |
| ! | AGTTGCATTTTCCGTGTTCG+AGG | + | chr4_1:16574412-16574431 | None:intergenic | 45.0% |
| AGGTCGATGCGAACTAAAGT+AGG | - | chr4_1:16574542-16574561 | Msa0537730:intron | 45.0% | |
| TGATCCTCTTGAGGTTGAAC+CGG | - | chr4_1:16574649-16574668 | Msa0537730:intron | 45.0% | |
| !! | AAGGCCAAAGGTGTTGCAAA+AGG | - | chr4_1:16574779-16574798 | Msa0537730:CDS | 45.0% |
| TGTCACAGGAGTTTCTCTTC+AGG | - | chr4_1:16575076-16575095 | Msa0537730:CDS | 45.0% | |
| TCTTCAGGACAAGCATTAGG+TGG | - | chr4_1:16575091-16575110 | Msa0537730:CDS | 45.0% | |
| GTGGTCACAAGAGATGTCAT+TGG | - | chr4_1:16575110-16575129 | Msa0537730:CDS | 45.0% | |
| CTAGCCAATGTTGATGTGTC+GGG | + | chr4_1:16575151-16575170 | None:intergenic | 45.0% | |
| CCTAGCCAATGTTGATGTGT+CGG | + | chr4_1:16575152-16575171 | None:intergenic | 45.0% | |
| CTTGAATTTGCACCCCATGT+TGG | + | chr4_1:16575295-16575314 | None:intergenic | 45.0% | |
| TTGGTGGAAGTTCTTCACCA+TGG | - | chr4_1:16575512-16575531 | Msa0537730:CDS | 45.0% | |
| TCTTCACCATGGTTGCAAGT+TGG | - | chr4_1:16575523-16575542 | Msa0537730:CDS | 45.0% | |
| CCAATTCCAACTTGCAACCA+TGG | + | chr4_1:16575532-16575551 | None:intergenic | 45.0% | |
| ! | CCATGGTTGCAAGTTGGAAT+TGG | - | chr4_1:16575529-16575548 | Msa0537730:CDS | 45.0% |
| !! | ATTATTTATTTATATTATTG+TGG | + | chr4_1:16571557-16571576 | None:intergenic | 5.0% |
| !!! | TTTTTTCTTATAATAAATTA+AGG | + | chr4_1:16573665-16573684 | None:intergenic | 5.0% |
| GTGACATTGCAACCGGAAGA+GGG | - | chr4_1:16568011-16568030 | Msa0537730:CDS | 50.0% | |
| TGACATTGCAACCGGAAGAG+GGG | - | chr4_1:16568012-16568031 | Msa0537730:CDS | 50.0% | |
| GGAAGAGGGGCTAATCAAGT+TGG | - | chr4_1:16568025-16568044 | Msa0537730:CDS | 50.0% | |
| AATTCGATCTCGTCGCCAAC+AGG | - | chr4_1:16568459-16568478 | Msa0537730:CDS | 50.0% | |
| GATGAAACGTGAATCAGGGG+CGG | + | chr4_1:16569261-16569280 | None:intergenic | 50.0% | |
| ! | ACACATGGTCCGTGCTTTTG+GGG | - | chr4_1:16570095-16570114 | Msa0537730:intron | 50.0% |
| AAATGTGCGCCCCAAAAGCA+CGG | + | chr4_1:16570107-16570126 | None:intergenic | 50.0% | |
| TGTGCGTATTCTGCAGGCAT+AGG | - | chr4_1:16570126-16570145 | Msa0537730:intron | 50.0% | |
| !! | GGGTCGAGTTTGGTGTGTTT+GGG | + | chr4_1:16570212-16570231 | None:intergenic | 50.0% |
| !! | TGGGTCGAGTTTGGTGTGTT+TGG | + | chr4_1:16570213-16570232 | None:intergenic | 50.0% |
| AGAGGCTAGAGAGGAGAAAG+AGG | + | chr4_1:16570984-16571003 | None:intergenic | 50.0% | |
| ! | GCGCATGTTAAGTTGCGTAG+GGG | + | chr4_1:16571201-16571220 | None:intergenic | 50.0% |
| GTCAACTGCGAACAAGCTTC+GGG | - | chr4_1:16571844-16571863 | Msa0537730:intron | 50.0% | |
| CATTAACCAACCGACAGGCA+AGG | - | chr4_1:16573559-16573578 | Msa0537730:intron | 50.0% | |
| CGACAGGCAAGGAGAAACAT+AGG | - | chr4_1:16573570-16573589 | Msa0537730:intron | 50.0% | |
| !! | GGATGTGGAAGAGCATTAGG+AGG | - | chr4_1:16574194-16574213 | Msa0537730:intron | 50.0% |
| GGAGGACATATGAGAGCTCA+TGG | - | chr4_1:16574212-16574231 | Msa0537730:intron | 50.0% | |
| ! | TGTAGGGTGTGTGAGCATTG+TGG | - | chr4_1:16574359-16574378 | Msa0537730:intron | 50.0% |
| ! | GTGGCTGGTCGAAAAGGAAA+AGG | - | chr4_1:16574522-16574541 | Msa0537730:intron | 50.0% |
| TCTTCCGGTTCAACCTCAAG+AGG | + | chr4_1:16574656-16574675 | None:intergenic | 50.0% | |
| GCTGAGGCACATGATTCTTC+CGG | + | chr4_1:16574671-16574690 | None:intergenic | 50.0% | |
| TGCACCCGACACATCAACAT+TGG | - | chr4_1:16575144-16575163 | Msa0537730:CDS | 50.0% | |
| ! | CCGACACATCAACATTGGCT+AGG | - | chr4_1:16575149-16575168 | Msa0537730:CDS | 50.0% |
| TTGTCGGAGCCGGAAGATTA+AGG | + | chr4_1:16575252-16575271 | None:intergenic | 50.0% | |
| GGTGACATTGCAACCGGAAG+AGG | - | chr4_1:16568010-16568029 | Msa0537730:CDS | 55.0% | |
| ! | TCGGAGATGGCTCTGCACTA+TGG | + | chr4_1:16571628-16571647 | None:intergenic | 55.0% |
| TGCGAACAAGCTTCGGGAAC+TGG | - | chr4_1:16571850-16571869 | Msa0537730:intron | 55.0% | |
| TACGGGGACTAGGCTTGAAG+AGG | - | chr4_1:16572027-16572046 | Msa0537730:intron | 55.0% | |
| AAGAGGCTCTTCGTCAGAGG+TGG | + | chr4_1:16572093-16572112 | None:intergenic | 55.0% | |
| TCGAAGAGGCTCTTCGTCAG+AGG | + | chr4_1:16572096-16572115 | None:intergenic | 55.0% | |
| GTTTCTCCTTGCCTGTCGGT+TGG | + | chr4_1:16573568-16573587 | None:intergenic | 55.0% | |
| ATGATGATCCGGCGAGCGAT+TGG | - | chr4_1:16574264-16574283 | Msa0537730:intron | 55.0% | |
| TGATGATCCGGCGAGCGATT+GGG | - | chr4_1:16574265-16574284 | Msa0537730:intron | 55.0% | |
| ! | GAGGATGTGGCTGGTCGAAA+AGG | - | chr4_1:16574516-16574535 | Msa0537730:intron | 55.0% |
| GAAACGTGAATCAGGGGCGG+AGG | + | chr4_1:16569258-16569277 | None:intergenic | 60.0% | |
| AAACCCAGGGGGCTTCGAAG+AGG | + | chr4_1:16572110-16572129 | None:intergenic | 60.0% | |
| ! | CATGGCGTCGGATTCTGGAG+AGG | + | chr4_1:16574465-16574484 | None:intergenic | 60.0% |
| CTCTCCAGAATCCGACGCCA+TGG | - | chr4_1:16574463-16574482 | Msa0537730:intron | 60.0% | |
| ! | TCTGCCATGGCGTCGGATTC+TGG | + | chr4_1:16574470-16574489 | None:intergenic | 60.0% |
| ACCATCGTCTGCCATGGCGT+CGG | + | chr4_1:16574477-16574496 | None:intergenic | 60.0% | |
| GCCATGGCAGACGATGGTGA+TGG | - | chr4_1:16574479-16574498 | Msa0537730:intron | 60.0% | |
| GCCATCACCATCGTCTGCCA+TGG | + | chr4_1:16574483-16574502 | None:intergenic | 60.0% | |
| !! | GACGATGGTGATGGCGTCAG+TGG | - | chr4_1:16574488-16574507 | Msa0537730:intron | 60.0% |
| !! | ATGGTGATGGCGTCAGTGGC+AGG | - | chr4_1:16574492-16574511 | Msa0537730:intron | 60.0% |
| GTCAGTGGCAGGAGAGGATG+TGG | - | chr4_1:16574503-16574522 | Msa0537730:intron | 60.0% | |
| AGAGCCTCTTCGAAGCCCCC+TGG | - | chr4_1:16572103-16572122 | Msa0537730:intron | 65.0% | |
| GAGCCTCTTCGAAGCCCCCT+GGG | - | chr4_1:16572104-16572123 | Msa0537730:intron | 65.0% | |
| GATCCGGCGAGCGATTGGGA+AGG | - | chr4_1:16574269-16574288 | Msa0537730:intron | 65.0% | |
| CCACCTTCCCAATCGCTCGC+CGG | + | chr4_1:16574275-16574294 | None:intergenic | 65.0% | |
| TCCGACGCCATGGCAGACGA+TGG | - | chr4_1:16574473-16574492 | Msa0537730:intron | 65.0% | |
| GATGGCGTCAGTGGCAGGAG+AGG | - | chr4_1:16574497-16574516 | Msa0537730:intron | 65.0% | |
| GTGGCAGGAGAGGATGTGGC+TGG | - | chr4_1:16574507-16574526 | Msa0537730:intron | 65.0% | |
| CGTGAATCAGGGGCGGAGGC+AGG | + | chr4_1:16569254-16569273 | None:intergenic | 70.0% | |
| CCGGCGAGCGATTGGGAAGG+TGG | - | chr4_1:16574272-16574291 | Msa0537730:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 16567956 | 16575582 | 16567956 | ID=Msa0537730;Name=Msa0537730 |
| chr4_1 | mRNA | 16567956 | 16575582 | 16567956 | ID=Msa0537730-mRNA-1;Parent=Msa0537730;Name=Msa0537730-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|2|0|739 |
| chr4_1 | exon | 16574757 | 16575582 | 16574757 | ID=Msa0537730-mRNA-1:exon:4950;Parent=Msa0537730-mRNA-1 |
| chr4_1 | exon | 16567956 | 16569349 | 16567956 | ID=Msa0537730-mRNA-1:exon:4949;Parent=Msa0537730-mRNA-1 |
| chr4_1 | CDS | 16574757 | 16575582 | 16574757 | ID=Msa0537730-mRNA-1:cds;Parent=Msa0537730-mRNA-1 |
| chr4_1 | CDS | 16567956 | 16569349 | 16567956 | ID=Msa0537730-mRNA-1:cds;Parent=Msa0537730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
