AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0539800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0539800 MtrunA17_Chr3g0082121 31.693 691 384 17 41 727 49 655 1.49e-101 328
Msa0539800 MtrunA17_Chr2g0324011 30.236 635 367 11 36 665 8 571 8.14e-101 323
Msa0539800 MtrunA17_Chr3g0088371 83.537 164 24 1 618 778 1 164 1.04e-90 283
Msa0539800 MtrunA17_Chr1g0202341 29.764 635 365 17 34 662 50 609 4.70e-81 273
Msa0539800 MtrunA17_Chr8g0363841 28.935 629 374 13 40 665 22 580 1.81e-76 260
Msa0539800 MtrunA17_Chr1g0203721 26.410 780 449 19 1 739 16 711 7.59e-75 260
Msa0539800 MtrunA17_Chr5g0448761 25.142 704 448 13 34 728 59 692 6.42e-69 242
Msa0539800 MtrunA17_Chr2g0296781 27.541 679 406 19 39 708 1 602 1.84e-68 240
Msa0539800 MtrunA17_Chr6g0458391 26.984 630 357 14 41 662 231 765 3.47e-66 234
Msa0539800 MtrunA17_Chr6g0477261 28.843 527 317 13 180 699 7 482 2.50e-63 224
Msa0539800 MtrunA17_Chr1g0164591 35.312 320 192 4 131 448 1 307 2.85e-63 215
Msa0539800 MtrunA17_Chr5g0441581 24.436 753 469 20 32 773 26 689 2.55e-59 214
Msa0539800 MtrunA17_Chr2g0287651 25.792 663 405 16 9 662 48 632 4.78e-59 216
Msa0539800 MtrunA17_Chr1g0207551 25.074 678 414 16 50 718 49 641 7.28e-56 206
Msa0539800 MtrunA17_Chr5g0440451 23.947 760 441 20 1 721 1 662 1.86e-55 206
Msa0539800 MtrunA17_Chr2g0329031 25.156 640 391 15 23 658 2 557 1.29e-54 201
Msa0539800 MtrunA17_Chr1g0172971 82.051 117 20 1 1 116 1 117 3.12e-54 196
Msa0539800 MtrunA17_Chr1g0196541 25.040 627 396 15 39 662 1 556 1.13e-53 198
Msa0539800 MtrunA17_Chr7g0258861 35.048 311 178 6 31 336 3 294 2.60e-53 187
Msa0539800 MtrunA17_Chr3g0118611 27.634 503 304 10 221 719 111 557 9.05e-53 196
Msa0539800 MtrunA17_Chr1g0198761 27.002 637 371 18 40 660 52 610 3.14e-52 194
Msa0539800 MtrunA17_Chr3g0080351 24.863 728 443 20 31 752 72 701 2.15e-50 190
Msa0539800 MtrunA17_Chr2g0290391 26.012 642 372 19 38 660 54 611 1.74e-48 182
Msa0539800 MtrunA17_Chr1g0203051 22.373 590 389 8 50 637 94 616 1.03e-47 179
Msa0539800 MtrunA17_Chr2g0287061 23.916 669 378 19 41 694 189 741 1.79e-47 181
Msa0539800 MtrunA17_Chr2g0276841 25.984 635 374 21 49 669 84 636 5.13e-45 172
Msa0539800 MtrunA17_Chr5g0448511 25.664 452 282 10 216 665 1 400 3.74e-44 167
Msa0539800 MtrunA17_Chr2g0291581 24.080 652 411 14 16 662 49 621 8.97e-43 166
Msa0539800 MtrunA17_Chr5g0431001 27.578 446 288 11 40 473 66 488 3.96e-42 160
Msa0539800 MtrunA17_Chr2g0291591 25.786 477 299 11 37 499 66 501 3.65e-41 159
Msa0539800 MtrunA17_Chr6g0475591 90.411 73 7 0 188 260 1 73 5.80e-40 141
Msa0539800 MtrunA17_Chr2g0294841 27.038 503 314 16 3 482 7 479 4.12e-37 149
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0539800 AT4G38180.1 27.856 639 381 14 34 665 72 637 4.29e-70 246
Msa0539800 AT4G15090.1 24.827 721 448 16 50 753 66 709 1.22e-61 223
Msa0539800 AT4G15090.5 24.827 721 448 16 50 753 66 709 1.22e-61 223
Msa0539800 AT4G15090.3 24.827 721 448 16 50 753 66 709 1.22e-61 223
Msa0539800 AT4G15090.2 24.827 721 448 16 50 753 66 709 1.22e-61 223
Msa0539800 AT4G15090.4 24.827 721 448 16 50 753 66 709 1.22e-61 223
Msa0539800 AT2G27110.2 26.466 597 365 15 127 719 108 634 5.16e-54 201
Msa0539800 AT2G27110.1 26.466 597 365 15 127 719 108 634 5.16e-54 201
Msa0539800 AT2G27110.3 26.937 542 325 13 180 719 17 489 2.38e-53 197
Msa0539800 AT3G06250.2 24.961 633 352 16 34 661 189 703 5.02e-52 194
Msa0539800 AT3G06250.1 24.961 633 352 16 34 661 189 703 5.02e-52 194
Msa0539800 AT3G06250.3 24.961 633 352 16 34 661 189 703 5.02e-52 194
Msa0539800 AT1G76320.3 24.520 677 415 18 50 720 12 598 4.24e-51 190
Msa0539800 AT1G76320.1 24.520 677 415 18 50 720 12 598 1.55e-50 189
Msa0539800 AT1G76320.4 24.520 677 415 18 50 720 12 598 1.55e-50 189
Msa0539800 AT1G76320.2 24.520 677 415 18 50 720 12 598 1.78e-50 189
Msa0539800 AT3G22170.2 22.888 734 445 17 32 753 67 691 2.15e-50 190
Msa0539800 AT3G22170.1 22.888 734 445 17 32 753 67 691 2.15e-50 190
Msa0539800 AT5G18960.2 24.575 647 360 18 24 661 200 727 1.86e-46 178
Msa0539800 AT5G18960.1 24.575 647 360 18 24 661 200 727 1.86e-46 178
Msa0539800 AT4G38170.1 25.290 431 264 11 235 662 24 399 5.42e-44 167
Msa0539800 AT1G10240.2 24.559 623 378 18 49 659 62 604 6.97e-43 166
Msa0539800 AT1G10240.1 24.559 623 378 18 49 659 62 604 6.97e-43 166
Msa0539800 AT2G32250.5 24.194 744 429 21 4 743 10 622 7.52e-42 164
Msa0539800 AT5G28530.1 24.100 639 388 17 40 660 60 619 8.66e-42 163
Msa0539800 AT2G32250.6 24.194 744 429 21 4 743 10 622 1.16e-41 164
Msa0539800 AT2G32250.1 24.194 744 429 21 4 743 10 622 1.16e-41 164
Msa0539800 AT2G32250.3 24.194 744 429 21 4 743 10 622 1.16e-41 164
Msa0539800 AT2G32250.2 24.194 744 429 21 4 743 10 622 1.30e-41 164
Msa0539800 AT2G32250.4 24.194 744 429 21 4 743 10 622 1.30e-41 164
Msa0539800 AT5G28530.3 23.944 639 385 18 40 660 60 615 5.91e-41 160
Msa0539800 AT5G28530.2 23.944 639 385 18 40 660 60 615 5.91e-41 160
Msa0539800 AT2G32250.7 24.212 698 397 19 50 743 12 581 7.24e-41 161
Msa0539800 AT2G32250.8 24.212 698 397 19 50 743 12 581 7.90e-41 161
Msa0539800 AT1G80010.1 23.583 653 376 22 41 662 101 661 1.34e-36 147
Msa0539800 AT1G52520.1 22.311 623 408 15 41 662 91 638 1.07e-34 142
Msa0539800 AT4G19990.1 27.985 268 186 3 219 483 106 369 6.28e-28 120
Msa0539800 AT4G19990.1 35.338 133 72 3 591 721 438 558 1.29e-12 72.0
Msa0539800 AT4G19990.3 27.985 268 186 3 219 483 163 426 7.72e-28 120
Msa0539800 AT4G19990.3 35.338 133 72 3 591 721 495 615 1.41e-12 72.0
Msa0539800 AT4G19990.4 27.985 268 186 3 219 483 163 426 7.72e-28 120
Msa0539800 AT4G19990.4 35.338 133 72 3 591 721 495 615 1.41e-12 72.0
Msa0539800 AT4G19990.5 27.985 268 186 3 219 483 163 426 7.91e-28 120
Msa0539800 AT4G19990.5 35.338 133 72 3 591 721 495 615 1.46e-12 71.6
Msa0539800 AT4G19990.7 27.985 268 186 3 219 483 177 440 7.99e-28 120
Msa0539800 AT4G19990.7 35.338 133 72 3 591 721 509 629 1.53e-12 71.6
Msa0539800 AT4G19990.6 27.985 268 186 3 219 483 163 426 9.96e-28 120
Msa0539800 AT4G19990.6 35.338 133 72 3 591 721 495 615 1.38e-12 72.0
Msa0539800 AT4G19990.2 27.985 268 186 3 219 483 163 426 9.96e-28 120
Msa0539800 AT4G19990.2 35.338 133 72 3 591 721 495 615 1.38e-12 72.0
Msa0539800 AT5G28530.4 21.781 629 352 20 40 660 60 556 6.66e-23 104
Msa0539800 AT5G28530.5 21.622 629 349 21 40 660 60 552 4.73e-22 101

Find 123 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGCTGAGTTGGACTTTA+AGG 0.133287 4_1:+21083046 Msa0539800:CDS
TTTCGATGAGTTAACTAATT+TGG 0.156761 4_1:+21082737 Msa0539800:CDS
AGTCGCTTCTTTGACCTAAT+TGG 0.186128 4_1:-21083872 None:intergenic
CTTTAGTCATTTCAACATTA+TGG 0.194287 4_1:+21083004 Msa0539800:CDS
CAACAAGATTATGCTCTATT+TGG 0.198611 4_1:+21081953 Msa0539800:CDS
TTCATTTCAGCTGCCTTTCT+TGG 0.201003 4_1:+21082456 Msa0539800:intron
CATCGTAAGAGTGTGTTATT+TGG 0.276792 4_1:+21082489 Msa0539800:CDS
TATGGTTTGAGGTTTCTTAT+TGG 0.280533 4_1:-21082583 None:intergenic
TTCTTTGACCTAATTGGATT+TGG 0.299426 4_1:-21083866 None:intergenic
AATCAGATTTCGACTACAAT+TGG 0.318540 4_1:+21082778 Msa0539800:CDS
TGTTCTTGAGGCAGGGAAAA+AGG 0.322946 4_1:+21083718 Msa0539800:CDS
GCCGATATTTATTGTTTGTT+CGG 0.341758 4_1:-21082003 None:intergenic
TTGGTTTGAATATTATCTTC+TGG 0.345646 4_1:+21084115 Msa0539800:three_prime_UTR
TTTGCTTCTTCCGAGCTATA+AGG 0.345757 4_1:-21083934 None:intergenic
GGTTTCGAATGTTGATGTTT+TGG 0.354913 4_1:+21083301 Msa0539800:CDS
ACTAGCCTGGTCTGTGTATA+TGG 0.360230 4_1:-21082601 None:intergenic
TATGCATTGGTCTTCAGTTT+GGG 0.370760 4_1:+21082878 Msa0539800:CDS
AATTCTTGATTGTTATGTAT+TGG 0.372244 4_1:+21084096 Msa0539800:three_prime_UTR
TAAAGAATCATGGAAGTCTT+TGG 0.375736 4_1:+21081244 Msa0539800:CDS
CTCAACGGTGTTCTTGAGGC+AGG 0.386173 4_1:+21083710 Msa0539800:CDS
AACAATAAATATCGGCCATT+AGG 0.388497 4_1:+21082010 Msa0539800:CDS
ACCGAACAAACAATAAATAT+CGG 0.389395 4_1:+21082002 Msa0539800:CDS
TTTCAATTTATCATATCTAA+TGG 0.390380 4_1:+21081090 None:intergenic
GTATGCATTGGTCTTCAGTT+TGG 0.392120 4_1:+21082877 Msa0539800:CDS
GTCTTTAGTGCCAACATTCA+TGG 0.395146 4_1:-21083594 None:intergenic
TTCTCATACTCAACAAGAAC+TGG 0.395633 4_1:-21081473 None:intergenic
AAGAAAGACCAAATCCAATT+AGG 0.397771 4_1:+21083858 Msa0539800:CDS
TTTGGTCTTTCTTTGAACTT+TGG 0.398856 4_1:-21083848 None:intergenic
TTCCTTCAAATACTATTATG+AGG 0.399583 4_1:+21083178 Msa0539800:CDS
GAGGAGTTTCTTATTTCTAA+AGG 0.403538 4_1:+21083743 Msa0539800:CDS
CATGTCGTATGTTTGAGAAC+CGG 0.411671 4_1:+21083426 Msa0539800:CDS
GATTATGATCTTCAAACCTT+GGG 0.413114 4_1:-21083349 None:intergenic
ATAACACTGGATTCTCTGTT+AGG 0.417808 4_1:+21081315 Msa0539800:CDS
GGGTTGTCACAGTCGACATT+AGG 0.419786 4_1:+21083384 Msa0539800:CDS
CGATTATGATCTTCAAACCT+TGG 0.425681 4_1:-21083350 None:intergenic
CGAGAAGTAAATGAAGTTCA+AGG 0.430014 4_1:+21081650 Msa0539800:CDS
AGCTGGAATATATTTGAAGT+TGG 0.433136 4_1:+21081532 Msa0539800:CDS
TGGTCTGTGTATATGGTTTG+AGG 0.447350 4_1:-21082594 None:intergenic
GAAAGGGTTGGTTGTAAAGC+TGG 0.447509 4_1:+21081515 Msa0539800:CDS
CGCTTTAAAACATATTGTGC+AGG 0.447633 4_1:-21083527 None:intergenic
CGTTATGCTTGTAACAAAGA+AGG 0.449439 4_1:+21081398 Msa0539800:CDS
GCTTTAATAAATTCTAAAGC+TGG 0.450264 4_1:+21081680 Msa0539800:CDS
ATCTGAGAGTGGACAATTGA+CGG 0.452529 4_1:+21081169 Msa0539800:CDS
TGGTCTTTGCTCATGGCACA+TGG 0.452802 4_1:+21082668 Msa0539800:CDS
GGCCTACTTCGGACTTTAAG+TGG 0.458978 4_1:+21082832 Msa0539800:CDS
ATGTCGTATGTTTGAGAACC+GGG 0.461344 4_1:+21083427 Msa0539800:CDS
ACAAAATAAGAAATCGGATA+AGG 0.469178 4_1:+21081364 Msa0539800:CDS
CTCCTCATAATAGTATTTGA+AGG 0.485089 4_1:-21083180 None:intergenic
TTACAACCAACCCTTTCCTC+TGG 0.485330 4_1:-21081509 None:intergenic
TTTAATTATGCATATAACAC+TGG 0.485542 4_1:+21081302 Msa0539800:CDS
TCTAATGACAACTCGTCAAA+AGG 0.488137 4_1:+21081793 Msa0539800:CDS
CTCAAGTAGCACAAATGCTC+TGG 0.489977 4_1:-21081620 None:intergenic
CAATTCACAAAATAAGAAAT+CGG 0.490263 4_1:+21081358 Msa0539800:CDS
TATGAGGAGGACACAACAAA+AGG 0.490908 4_1:+21083194 Msa0539800:CDS
ATGATTGTCAAAACCAAGAA+AGG 0.491378 4_1:-21082469 None:intergenic
CTGTCTATGAACCATCTGTT+GGG 0.491412 4_1:+21083819 Msa0539800:CDS
ATCAGATTTCGACTACAATT+GGG 0.491708 4_1:+21082779 Msa0539800:CDS
CGTCAAAAGGAGATGGTGGC+TGG 0.492100 4_1:+21081806 Msa0539800:CDS
ACATTATGGTTCAGAGAATG+AGG 0.494022 4_1:+21083018 Msa0539800:CDS
GACCGCATAAGCTGACTGTT+GGG 0.496307 4_1:-21083098 None:intergenic
GAAGCGATGGGTCAAGGAGT+TGG 0.502080 4_1:+21081725 Msa0539800:CDS
TGTCTTCTGCAGCATCAACT+TGG 0.502977 4_1:-21081898 None:intergenic
AAATGCTCTGGTTTATGTAA+TGG 0.504865 4_1:-21081608 None:intergenic
CTCATTCAAATCGTATGCAT+TGG 0.507227 4_1:+21082865 Msa0539800:CDS
ATCATAATCGACTTGATGAA+AGG 0.507955 4_1:+21083363 Msa0539800:CDS
TTTAAGTCCGAAAATCGAAA+AGG 0.508080 4_1:-21081764 None:intergenic
GAGGGATAATCATGCTGAGT+TGG 0.508852 4_1:+21083037 Msa0539800:CDS
ATTGGTCTTCAGTTTGGGTG+AGG 0.509410 4_1:+21082883 Msa0539800:CDS
TGTCTATAAGATATATAAGT+GGG 0.514682 4_1:+21081568 Msa0539800:CDS
GATCTTCAAACCTTGGGGAA+AGG 0.519004 4_1:-21083343 None:intergenic
TAAAGAATCGAACAAGTGAA+TGG 0.519618 4_1:-21082986 None:intergenic
TCATAATCGACTTGATGAAA+GGG 0.526860 4_1:+21083364 Msa0539800:CDS
CATAATAGTATTTGAAGGAA+AGG 0.529686 4_1:-21083175 None:intergenic
GACAGAAATTCCTTATAGCT+CGG 0.533906 4_1:+21083924 Msa0539800:three_prime_UTR
ACTTCAACAACGCACTAGCC+TGG 0.534735 4_1:-21082614 None:intergenic
GAGAACATCTTATGAAGCGA+TGG 0.538371 4_1:+21081712 Msa0539800:CDS
TAACAAAGAAGGTTTCAAGA+AGG 0.538422 4_1:+21081409 Msa0539800:CDS
AATCGAACAAGTGAATGGTC+TGG 0.540971 4_1:-21082981 None:intergenic
ATGAGGAGGACACAACAAAA+GGG 0.542065 4_1:+21083195 Msa0539800:CDS
AACAAAGAAGGTTTCAAGAA+GGG 0.545537 4_1:+21081410 Msa0539800:CDS
TCTTATGAAGCGATGGGTCA+AGG 0.545849 4_1:+21081719 Msa0539800:CDS
CATTTAGTAATAAAGAATCA+TGG 0.553070 4_1:+21081234 Msa0539800:CDS
CTGAAATCCACCATGAATGT+TGG 0.557140 4_1:+21083584 Msa0539800:CDS
AATGAAGCTCTCTCGAAACC+AGG 0.565261 4_1:+21081860 Msa0539800:CDS
TGAAAATTCAGTTATTGATG+CGG 0.565546 4_1:+21081193 Msa0539800:CDS
GCTGTCTATGAACCATCTGT+TGG 0.568181 4_1:+21083818 Msa0539800:CDS
TACACGTGTTTGCGCAGATG+CGG 0.571672 4_1:+21083670 Msa0539800:CDS
ATGTCTATAAGATATATAAG+TGG 0.572287 4_1:+21081567 Msa0539800:CDS
GCGATGGGTCAAGGAGTTGG+AGG 0.575794 4_1:+21081728 Msa0539800:CDS
GGACCGCATAAGCTGACTGT+TGG 0.579264 4_1:-21083099 None:intergenic
TTTGGTGCAGTCCCAACAGA+TGG 0.581566 4_1:-21083830 None:intergenic
GAAGCAAAAGAAAGATGATG+AGG 0.585686 4_1:+21083949 Msa0539800:three_prime_UTR
TGGTGTATACTTGTTTACTA+CGG 0.585960 4_1:-21083120 None:intergenic
ATATTAACTTCATCTGAGAG+TGG 0.588105 4_1:+21081158 Msa0539800:CDS
TCAACGGTGTTCTTGAGGCA+GGG 0.590097 4_1:+21083711 Msa0539800:CDS
ATTTCTCAACGGTGTTCTTG+AGG 0.591378 4_1:+21083706 Msa0539800:CDS
ATAAGTTAGGAAAGATGATG+AGG 0.591839 4_1:+21084011 Msa0539800:three_prime_UTR
TTGAAGAAAACCTTTCCCCA+AGG 0.594796 4_1:+21083333 Msa0539800:CDS
TGAAGACTTAGAAGGCGTAA+CGG 0.598405 4_1:-21083786 None:intergenic
GACAACTCGTCAAAAGGAGA+TGG 0.599038 4_1:+21081799 Msa0539800:CDS
GAGGCTTTAACAATTTAAGC+GGG 0.600751 4_1:+21083968 Msa0539800:three_prime_UTR
TTGATATCGTTGTGCTTGAG+TGG 0.601464 4_1:-21083618 None:intergenic
AACTCGTCAAAAGGAGATGG+TGG 0.603142 4_1:+21081802 Msa0539800:CDS
ACGTGTTTGCGCAGATGCGG+AGG 0.605934 4_1:+21083673 Msa0539800:CDS
ATCCCAACAGTCAGCTTATG+CGG 0.606153 4_1:+21083096 Msa0539800:CDS
CTTCAAATACTATTATGAGG+AGG 0.607664 4_1:+21083181 Msa0539800:CDS
AGAACTGGACTGTCACATGT+TGG 0.620791 4_1:-21081458 None:intergenic
AGAACATCTTATGAAGCGAT+GGG 0.621635 4_1:+21081713 Msa0539800:CDS
AGCCACTTAAAGTCCGAAGT+AGG 0.621799 4_1:-21082834 None:intergenic
GGGTCAAGGAGTTGGAGGCA+CGG 0.624321 4_1:+21081733 Msa0539800:CDS
TGAGGCTTTAACAATTTAAG+CGG 0.627823 4_1:+21083967 Msa0539800:three_prime_UTR
ATTATGATCTTCAAACCTTG+GGG 0.630358 4_1:-21083348 None:intergenic
GGTCTTTGCTCATGGCACAT+GGG 0.639768 4_1:+21082669 Msa0539800:CDS
TTTAGTGCCAACATTCATGG+TGG 0.641441 4_1:-21083591 None:intergenic
CATTATGGTTCAGAGAATGA+GGG 0.643278 4_1:+21083019 Msa0539800:CDS
GATTTCAGCTTATCGACAGA+CGG 0.644926 4_1:-21083569 None:intergenic
TGAATAAATGAAAAGCAAGA+TGG 0.655697 4_1:-21083140 None:intergenic
GCATCTGAAATATTTCTCAA+CGG 0.661104 4_1:+21083695 Msa0539800:CDS
CATGTCGACATAAGAAACCC+CGG 0.663279 4_1:-21083445 None:intergenic
TGTCGTATGTTTGAGAACCG+GGG 0.673760 4_1:+21083428 Msa0539800:CDS
ATGTTGATAATGATAATGAG+AGG 0.683310 4_1:+21083279 Msa0539800:CDS
TCAAACCATATACACAGACC+AGG 0.683597 4_1:+21082596 Msa0539800:CDS
TGTTGATAATGATAATGAGA+GGG 0.689129 4_1:+21083280 Msa0539800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTATGTTATAAGTT+AGG + chr4_1:21083998-21084017 Msa0539800:three_prime_UTR 10.0%
!!! ATGATGAAAAACTATTTTAA+TGG + chr4_1:21082807-21082826 Msa0539800:CDS 15.0%
!! CATTTAGTAATAAAGAATCA+TGG + chr4_1:21081234-21081253 Msa0539800:CDS 20.0%
!! TTTAATTATGCATATAACAC+TGG + chr4_1:21081302-21081321 Msa0539800:CDS 20.0%
!! CAATTCACAAAATAAGAAAT+CGG + chr4_1:21081358-21081377 Msa0539800:CDS 20.0%
!! ATGTCTATAAGATATATAAG+TGG + chr4_1:21081567-21081586 Msa0539800:CDS 20.0%
!! TGTCTATAAGATATATAAGT+GGG + chr4_1:21081568-21081587 Msa0539800:CDS 20.0%
!!! TGAATGTTTATATTGATTGA+AGG + chr4_1:21082157-21082176 Msa0539800:intron 20.0%
!!! AATTTAATGTTCTGGTTTAT+GGG + chr4_1:21082185-21082204 Msa0539800:intron 20.0%
!!! TGAAAAACTATTTTAATGGA+AGG + chr4_1:21082811-21082830 Msa0539800:CDS 20.0%
!! AATTCTTGATTGTTATGTAT+TGG + chr4_1:21084096-21084115 Msa0539800:three_prime_UTR 20.0%
! TGAAAATTCAGTTATTGATG+CGG + chr4_1:21081193-21081212 Msa0539800:CDS 25.0%
!!! CTTATTTTGTGAATTGTTCT+TGG - chr4_1:21081354-21081373 None:intergenic 25.0%
! ACAAAATAAGAAATCGGATA+AGG + chr4_1:21081364-21081383 Msa0539800:CDS 25.0%
!!! GCTTTAATAAATTCTAAAGC+TGG + chr4_1:21081680-21081699 Msa0539800:CDS 25.0%
! ACCGAACAAACAATAAATAT+CGG + chr4_1:21082002-21082021 Msa0539800:CDS 25.0%
! AGTACAAAATACTAACCTAA+TGG - chr4_1:21082028-21082047 None:intergenic 25.0%
! TGAAATTTGAATGAATGTTC+TGG + chr4_1:21082075-21082094 Msa0539800:intron 25.0%
!! AGGTTTAGAATTTAATGTTC+TGG + chr4_1:21082177-21082196 Msa0539800:intron 25.0%
!!! GAATTTAATGTTCTGGTTTA+TGG + chr4_1:21082184-21082203 Msa0539800:intron 25.0%
!! TGTTGTATTTTGTTCTGATT+TGG + chr4_1:21082433-21082452 Msa0539800:intron 25.0%
! AAAACACCTTGAAAAACATT+CGG - chr4_1:21082645-21082664 None:intergenic 25.0%
! TTTCGATGAGTTAACTAATT+TGG + chr4_1:21082737-21082756 Msa0539800:CDS 25.0%
! CTTTAGTCATTTCAACATTA+TGG + chr4_1:21083004-21083023 Msa0539800:CDS 25.0%
! TGAATAAATGAAAAGCAAGA+TGG - chr4_1:21083143-21083162 None:intergenic 25.0%
! CATAATAGTATTTGAAGGAA+AGG - chr4_1:21083178-21083197 None:intergenic 25.0%
! TTCCTTCAAATACTATTATG+AGG + chr4_1:21083178-21083197 Msa0539800:CDS 25.0%
!! CAAAGTTTTCACAATTGAAA+AGG + chr4_1:21083238-21083257 Msa0539800:CDS 25.0%
!!! ATGTTGATAATGATAATGAG+AGG + chr4_1:21083279-21083298 Msa0539800:CDS 25.0%
!!! TGTTGATAATGATAATGAGA+GGG + chr4_1:21083280-21083299 Msa0539800:CDS 25.0%
ATATTAACTTCATCTGAGAG+TGG + chr4_1:21081158-21081177 Msa0539800:CDS 30.0%
TAAAGAATCATGGAAGTCTT+TGG + chr4_1:21081244-21081263 Msa0539800:CDS 30.0%
TAACAAAGAAGGTTTCAAGA+AGG + chr4_1:21081409-21081428 Msa0539800:CDS 30.0%
AACAAAGAAGGTTTCAAGAA+GGG + chr4_1:21081410-21081429 Msa0539800:CDS 30.0%
TAAAGAAAAACCAGAGGAAA+GGG + chr4_1:21081499-21081518 Msa0539800:CDS 30.0%
! AGCTGGAATATATTTGAAGT+TGG + chr4_1:21081532-21081551 Msa0539800:CDS 30.0%
! AAATGCTCTGGTTTATGTAA+TGG - chr4_1:21081611-21081630 None:intergenic 30.0%
! GAATCTTCCTTTTCGATTTT+CGG + chr4_1:21081757-21081776 Msa0539800:CDS 30.0%
TTTAAGTCCGAAAATCGAAA+AGG - chr4_1:21081767-21081786 None:intergenic 30.0%
TGGATATCATAGTAAAAACC+TGG - chr4_1:21081881-21081900 None:intergenic 30.0%
!!! AAGACATAGCCAGTATTTTT+TGG + chr4_1:21081915-21081934 Msa0539800:CDS 30.0%
!!! AGACATAGCCAGTATTTTTT+GGG + chr4_1:21081916-21081935 Msa0539800:CDS 30.0%
CAACAAGATTATGCTCTATT+TGG + chr4_1:21081953-21081972 Msa0539800:CDS 30.0%
GCCGATATTTATTGTTTGTT+CGG - chr4_1:21082006-21082025 None:intergenic 30.0%
AACAATAAATATCGGCCATT+AGG + chr4_1:21082010-21082029 Msa0539800:CDS 30.0%
!! ATGTTCTGGTTTAGAATTGA+AGG + chr4_1:21082089-21082108 Msa0539800:intron 30.0%
CTGGTATATGTGTGTTAATT+TGG + chr4_1:21082114-21082133 Msa0539800:intron 30.0%
AAACACATATGATCTTTCCA+TGG - chr4_1:21082248-21082267 None:intergenic 30.0%
TTTCTATTTACACAGCACAA+TGG + chr4_1:21082392-21082411 Msa0539800:intron 30.0%
ATGATTGTCAAAACCAAGAA+AGG - chr4_1:21082472-21082491 None:intergenic 30.0%
! TATGGTTTGAGGTTTCTTAT+TGG - chr4_1:21082586-21082605 None:intergenic 30.0%
! TCAATTCCGAATGTTTTTCA+AGG + chr4_1:21082636-21082655 Msa0539800:CDS 30.0%
!!! GTTTTTCAAGGTGTTTTTCA+TGG + chr4_1:21082648-21082667 Msa0539800:CDS 30.0%
GAGAATGCAAAGAAAAATCT+CGG + chr4_1:21082693-21082712 Msa0539800:CDS 30.0%
AATCAGATTTCGACTACAAT+TGG + chr4_1:21082778-21082797 Msa0539800:CDS 30.0%
ATCAGATTTCGACTACAATT+GGG + chr4_1:21082779-21082798 Msa0539800:CDS 30.0%
TAAAGAATCGAACAAGTGAA+TGG - chr4_1:21082989-21083008 None:intergenic 30.0%
TGGTGTATACTTGTTTACTA+CGG - chr4_1:21083123-21083142 None:intergenic 30.0%
CTCCTCATAATAGTATTTGA+AGG - chr4_1:21083183-21083202 None:intergenic 30.0%
CTTCAAATACTATTATGAGG+AGG + chr4_1:21083181-21083200 Msa0539800:CDS 30.0%
ATTATGATCTTCAAACCTTG+GGG - chr4_1:21083351-21083370 None:intergenic 30.0%
GATTATGATCTTCAAACCTT+GGG - chr4_1:21083352-21083371 None:intergenic 30.0%
!! ATCATAATCGACTTGATGAA+AGG + chr4_1:21083363-21083382 Msa0539800:CDS 30.0%
!! TCATAATCGACTTGATGAAA+GGG + chr4_1:21083364-21083383 Msa0539800:CDS 30.0%
!! TCGACATGTTTTCAAGATTT+TGG + chr4_1:21083460-21083479 Msa0539800:CDS 30.0%
!! ACATGTTTTCAAGATTTTGG+AGG + chr4_1:21083463-21083482 Msa0539800:CDS 30.0%
!!! CTGCACAATATGTTTTAAAG+CGG + chr4_1:21083528-21083547 Msa0539800:CDS 30.0%
! GCATCTGAAATATTTCTCAA+CGG + chr4_1:21083695-21083714 Msa0539800:CDS 30.0%
!! GAGGAGTTTCTTATTTCTAA+AGG + chr4_1:21083743-21083762 Msa0539800:CDS 30.0%
! TTTGGTCTTTCTTTGAACTT+TGG - chr4_1:21083851-21083870 None:intergenic 30.0%
AAGAAAGACCAAATCCAATT+AGG + chr4_1:21083858-21083877 Msa0539800:CDS 30.0%
TTCTTTGACCTAATTGGATT+TGG - chr4_1:21083869-21083888 None:intergenic 30.0%
! TGAGGCTTTAACAATTTAAG+CGG + chr4_1:21083967-21083986 Msa0539800:three_prime_UTR 30.0%
ATAAGTTAGGAAAGATGATG+AGG + chr4_1:21084011-21084030 Msa0539800:three_prime_UTR 30.0%
! TGAGGCTTTAACTAAAAAAG+CGG + chr4_1:21084029-21084048 Msa0539800:three_prime_UTR 30.0%
!!! GTGTTTGTTGCTGTTTTCAA+TGG + chr4_1:21081130-21081149 Msa0539800:exon 35.0%
ATAACACTGGATTCTCTGTT+AGG + chr4_1:21081315-21081334 Msa0539800:CDS 35.0%
CGTTATGCTTGTAACAAAGA+AGG + chr4_1:21081398-21081417 Msa0539800:CDS 35.0%
GTCTGCTTAATCCTAAAAAC+AGG + chr4_1:21081435-21081454 Msa0539800:CDS 35.0%
TTCTCATACTCAACAAGAAC+TGG - chr4_1:21081476-21081495 None:intergenic 35.0%
GAAAGCTAAAGAAAAACCAG+AGG + chr4_1:21081493-21081512 Msa0539800:CDS 35.0%
CTAAAGAAAAACCAGAGGAA+AGG + chr4_1:21081498-21081517 Msa0539800:CDS 35.0%
CGAGAAGTAAATGAAGTTCA+AGG + chr4_1:21081650-21081669 Msa0539800:CDS 35.0%
AGAACATCTTATGAAGCGAT+GGG + chr4_1:21081713-21081732 Msa0539800:CDS 35.0%
TCTAATGACAACTCGTCAAA+AGG + chr4_1:21081793-21081812 Msa0539800:CDS 35.0%
! TGGTTTAGAATTGAAGGTTC+TGG + chr4_1:21082095-21082114 Msa0539800:intron 35.0%
CATAAATTCCAAGGCAAGAT+AGG - chr4_1:21082215-21082234 None:intergenic 35.0%
TGTACAGAGCATAAATTCCA+AGG - chr4_1:21082224-21082243 None:intergenic 35.0%
! CATCGTAAGAGTGTGTTATT+TGG + chr4_1:21082489-21082508 Msa0539800:CDS 35.0%
!!! AGACATCAGCTACTTTTGAT+TGG + chr4_1:21082532-21082551 Msa0539800:CDS 35.0%
! TTTTTCATGGTCTTTGCTCA+TGG + chr4_1:21082661-21082680 Msa0539800:CDS 35.0%
! TTTTAATGGAAGGCCTACTT+CGG + chr4_1:21082821-21082840 Msa0539800:CDS 35.0%
CTCATTCAAATCGTATGCAT+TGG + chr4_1:21082865-21082884 Msa0539800:CDS 35.0%
!! TATGCATTGGTCTTCAGTTT+GGG + chr4_1:21082878-21082897 Msa0539800:CDS 35.0%
ACATTATGGTTCAGAGAATG+AGG + chr4_1:21083018-21083037 Msa0539800:CDS 35.0%
CATTATGGTTCAGAGAATGA+GGG + chr4_1:21083019-21083038 Msa0539800:CDS 35.0%
! GGTTTCGAATGTTGATGTTT+TGG + chr4_1:21083301-21083320 Msa0539800:CDS 35.0%
CGATTATGATCTTCAAACCT+TGG - chr4_1:21083353-21083372 None:intergenic 35.0%
!! TTCAAGATTTTGGAGGTCTT+AGG + chr4_1:21083470-21083489 Msa0539800:CDS 35.0%
!! CGCTTTAAAACATATTGTGC+AGG - chr4_1:21083530-21083549 None:intergenic 35.0%
!!! CACAATATGTTTTAAAGCGG+TGG + chr4_1:21083531-21083550 Msa0539800:CDS 35.0%
!! ACTGCTTTTGAAGACTTAGA+AGG - chr4_1:21083797-21083816 None:intergenic 35.0%
GACAGAAATTCCTTATAGCT+CGG + chr4_1:21083924-21083943 Msa0539800:three_prime_UTR 35.0%
GAAGCAAAAGAAAGATGATG+AGG + chr4_1:21083949-21083968 Msa0539800:three_prime_UTR 35.0%
! GAGGCTTTAACAATTTAAGC+GGG + chr4_1:21083968-21083987 Msa0539800:three_prime_UTR 35.0%
ATCTGAGAGTGGACAATTGA+CGG + chr4_1:21081169-21081188 Msa0539800:CDS 40.0%
!! TCACATGTTGGCCTGTTTTT+AGG - chr4_1:21081449-21081468 None:intergenic 40.0%
GAGAACATCTTATGAAGCGA+TGG + chr4_1:21081712-21081731 Msa0539800:CDS 40.0%
TCCATCTGCCCAAAAAATAC+TGG - chr4_1:21081927-21081946 None:intergenic 40.0%
ATTTATGCTCTGTACAGCCA+TGG + chr4_1:21082228-21082247 Msa0539800:intron 40.0%
TCCAGCTATGCAAAGATCAT+AGG + chr4_1:21082338-21082357 Msa0539800:intron 40.0%
ACCTATGATCTTTGCATAGC+TGG - chr4_1:21082342-21082361 None:intergenic 40.0%
TTCATTTCAGCTGCCTTTCT+TGG + chr4_1:21082456-21082475 Msa0539800:intron 40.0%
TGGTCTGTGTATATGGTTTG+AGG - chr4_1:21082597-21082616 None:intergenic 40.0%
TCAAACCATATACACAGACC+AGG + chr4_1:21082596-21082615 Msa0539800:CDS 40.0%
!! GTATGCATTGGTCTTCAGTT+TGG + chr4_1:21082877-21082896 Msa0539800:CDS 40.0%
AATCGAACAAGTGAATGGTC+TGG - chr4_1:21082984-21083003 None:intergenic 40.0%
! TCATGCTGAGTTGGACTTTA+AGG + chr4_1:21083046-21083065 Msa0539800:CDS 40.0%
TATGAGGAGGACACAACAAA+AGG + chr4_1:21083194-21083213 Msa0539800:CDS 40.0%
ATGAGGAGGACACAACAAAA+GGG + chr4_1:21083195-21083214 Msa0539800:CDS 40.0%
TTGAAGAAAACCTTTCCCCA+AGG + chr4_1:21083333-21083352 Msa0539800:CDS 40.0%
CATGTCGTATGTTTGAGAAC+CGG + chr4_1:21083426-21083445 Msa0539800:CDS 40.0%
ATGTCGTATGTTTGAGAACC+GGG + chr4_1:21083427-21083446 Msa0539800:CDS 40.0%
!! AAGATTTTGGAGGTCTTAGG+TGG + chr4_1:21083473-21083492 Msa0539800:CDS 40.0%
GATTTCAGCTTATCGACAGA+CGG - chr4_1:21083572-21083591 None:intergenic 40.0%
CTGAAATCCACCATGAATGT+TGG + chr4_1:21083584-21083603 Msa0539800:CDS 40.0%
TTTAGTGCCAACATTCATGG+TGG - chr4_1:21083594-21083613 None:intergenic 40.0%
GTCTTTAGTGCCAACATTCA+TGG - chr4_1:21083597-21083616 None:intergenic 40.0%
TTGATATCGTTGTGCTTGAG+TGG - chr4_1:21083621-21083640 None:intergenic 40.0%
ATTTCTCAACGGTGTTCTTG+AGG + chr4_1:21083706-21083725 Msa0539800:CDS 40.0%
! TGAAGACTTAGAAGGCGTAA+CGG - chr4_1:21083789-21083808 None:intergenic 40.0%
CTGTCTATGAACCATCTGTT+GGG + chr4_1:21083819-21083838 Msa0539800:CDS 40.0%
AGTCGCTTCTTTGACCTAAT+TGG - chr4_1:21083875-21083894 None:intergenic 40.0%
TTTGCTTCTTCCGAGCTATA+AGG - chr4_1:21083937-21083956 None:intergenic 40.0%
AGAACTGGACTGTCACATGT+TGG - chr4_1:21081461-21081480 None:intergenic 45.0%
GAAAAACCAGAGGAAAGGGT+TGG + chr4_1:21081503-21081522 Msa0539800:CDS 45.0%
TTACAACCAACCCTTTCCTC+TGG - chr4_1:21081512-21081531 None:intergenic 45.0%
!! GAAAGGGTTGGTTGTAAAGC+TGG + chr4_1:21081515-21081534 Msa0539800:CDS 45.0%
CTCAAGTAGCACAAATGCTC+TGG - chr4_1:21081623-21081642 None:intergenic 45.0%
TCTTATGAAGCGATGGGTCA+AGG + chr4_1:21081719-21081738 Msa0539800:CDS 45.0%
GACAACTCGTCAAAAGGAGA+TGG + chr4_1:21081799-21081818 Msa0539800:CDS 45.0%
AACTCGTCAAAAGGAGATGG+TGG + chr4_1:21081802-21081821 Msa0539800:CDS 45.0%
AATGAAGCTCTCTCGAAACC+AGG + chr4_1:21081860-21081879 Msa0539800:CDS 45.0%
TGTCTTCTGCAGCATCAACT+TGG - chr4_1:21081901-21081920 None:intergenic 45.0%
!!! GCCAGTATTTTTTGGGCAGA+TGG + chr4_1:21081923-21081942 Msa0539800:CDS 45.0%
! ACTAGCCTGGTCTGTGTATA+TGG - chr4_1:21082604-21082623 None:intergenic 45.0%
AGCCACTTAAAGTCCGAAGT+AGG - chr4_1:21082837-21082856 None:intergenic 45.0%
!! ATTGGTCTTCAGTTTGGGTG+AGG + chr4_1:21082883-21082902 Msa0539800:CDS 45.0%
! GTGAGGTCACATTTTACAGC+TGG + chr4_1:21082900-21082919 Msa0539800:CDS 45.0%
GAGGGATAATCATGCTGAGT+TGG + chr4_1:21083037-21083056 Msa0539800:CDS 45.0%
ATCCCAACAGTCAGCTTATG+CGG + chr4_1:21083096-21083115 Msa0539800:CDS 45.0%
GATCTTCAAACCTTGGGGAA+AGG - chr4_1:21083346-21083365 None:intergenic 45.0%
TGTCGTATGTTTGAGAACCG+GGG + chr4_1:21083428-21083447 Msa0539800:CDS 45.0%
CATGTCGACATAAGAAACCC+CGG - chr4_1:21083448-21083467 None:intergenic 45.0%
TGTTCTTGAGGCAGGGAAAA+AGG + chr4_1:21083718-21083737 Msa0539800:CDS 45.0%
GCTGTCTATGAACCATCTGT+TGG + chr4_1:21083818-21083837 Msa0539800:CDS 45.0%
TGGGTGATCCTATCTTGCCT+TGG + chr4_1:21082204-21082223 Msa0539800:intron 50.0%
ACTTCAACAACGCACTAGCC+TGG - chr4_1:21082617-21082636 None:intergenic 50.0%
TGGTCTTTGCTCATGGCACA+TGG + chr4_1:21082668-21082687 Msa0539800:CDS 50.0%
GGTCTTTGCTCATGGCACAT+GGG + chr4_1:21082669-21082688 Msa0539800:CDS 50.0%
GGCCTACTTCGGACTTTAAG+TGG + chr4_1:21082832-21082851 Msa0539800:CDS 50.0%
GACCGCATAAGCTGACTGTT+GGG - chr4_1:21083101-21083120 None:intergenic 50.0%
GGGTTGTCACAGTCGACATT+AGG + chr4_1:21083384-21083403 Msa0539800:CDS 50.0%
TACACGTGTTTGCGCAGATG+CGG + chr4_1:21083670-21083689 Msa0539800:CDS 50.0%
TCAACGGTGTTCTTGAGGCA+GGG + chr4_1:21083711-21083730 Msa0539800:CDS 50.0%
! TTTGGTGCAGTCCCAACAGA+TGG - chr4_1:21083833-21083852 None:intergenic 50.0%
GAAGCGATGGGTCAAGGAGT+TGG + chr4_1:21081725-21081744 Msa0539800:CDS 55.0%
! CGTCAAAAGGAGATGGTGGC+TGG + chr4_1:21081806-21081825 Msa0539800:CDS 55.0%
GGACCGCATAAGCTGACTGT+TGG - chr4_1:21083102-21083121 None:intergenic 55.0%
CTCAACGGTGTTCTTGAGGC+AGG + chr4_1:21083710-21083729 Msa0539800:CDS 55.0%
TGAGGCAGGGAAAAAGGCAG+AGG + chr4_1:21083724-21083743 Msa0539800:CDS 55.0%
GCGATGGGTCAAGGAGTTGG+AGG + chr4_1:21081728-21081747 Msa0539800:CDS 60.0%
GGGTCAAGGAGTTGGAGGCA+CGG + chr4_1:21081733-21081752 Msa0539800:CDS 60.0%
ACGTGTTTGCGCAGATGCGG+AGG + chr4_1:21083673-21083692 Msa0539800:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 21081104 21084137 21081104 ID=Msa0539800;Name=Msa0539800
chr4_1 mRNA 21081104 21084137 21081104 ID=Msa0539800-mRNA-1;Parent=Msa0539800;Name=Msa0539800-mRNA-1;_AED=0.00;_eAED=0.00;_QI=45|1|1|1|1|1|2|218|778
chr4_1 exon 21081104 21082031 21081104 ID=Msa0539800-mRNA-1:exon:6000;Parent=Msa0539800-mRNA-1
chr4_1 exon 21082466 21084137 21082466 ID=Msa0539800-mRNA-1:exon:6001;Parent=Msa0539800-mRNA-1
chr4_1 five_prime_UTR 21081104 21081148 21081104 ID=Msa0539800-mRNA-1:five_prime_utr;Parent=Msa0539800-mRNA-1
chr4_1 CDS 21081149 21082031 21081149 ID=Msa0539800-mRNA-1:cds;Parent=Msa0539800-mRNA-1
chr4_1 CDS 21082466 21083919 21082466 ID=Msa0539800-mRNA-1:cds;Parent=Msa0539800-mRNA-1
chr4_1 three_prime_UTR 21083920 21084137 21083920 ID=Msa0539800-mRNA-1:three_prime_utr;Parent=Msa0539800-mRNA-1
Gene Sequence

>Msa0539800

ATGGATTTGATATTAACTTCATCTGAGAGTGGACAATTGACGGTTGAAAATTCAGTTATTGATGCGGATAGTTCTCAATGTTACTCATTTAGTAATAAAGAATCATGGAAGTCTTTGGTCTTTAAATCTATAAAAGAGATTGAAGATTTTTATTTTAATTATGCATATAACACTGGATTCTCTGTTAGGAGTATGTTGAAGTCCAAGAACAATTCACAAAATAAGAAATCGGATAAGGTACATTATGTGCGTTATGCTTGTAACAAAGAAGGTTTCAAGAAGGGAAGTCTGCTTAATCCTAAAAACAGGCCAACATGTGACAGTCCAGTTCTTGTTGAGTATGAGAAAGCTAAAGAAAAACCAGAGGAAAGGGTTGGTTGTAAAGCTGGAATATATTTGAAGTTGGATGAAGCGTTGAATGTCTATAAGATATATAAGTGGGAAGTTGATCACTGTCATCCATTACATAAACCAGAGCATTTGTGCTACTTGAGATCATTTCGAGAAGTAAATGAAGTTCAAGGACAACTTGCTTTAATAAATTCTAAAGCTGGAATGTCGATGAGAACATCTTATGAAGCGATGGGTCAAGGAGTTGGAGGCACGGAGAATCTTCCTTTTCGATTTTCGGACTTAAAGAACTATCTAATGACAACTCGTCAAAAGGAGATGGTGGCTGGTGAAGCAACTGTTATTCAAGAATTCTTTAGAAATGAAGCTCTCTCGAAACCAGGTTTTTACTATGATATCCAAGTTGATGCTGCAGAAGACATAGCCAGTATTTTTTGGGCAGATGGAATTATGCAACAAGATTATGCTCTATTTGGTGATGTTGTCAGTTTTGATACAACTTACCGAACAAACAATAAATATCGGCCATTAGCTGCCTTTCTTGGTTTTGACAATCATCGTAAGAGTGTGTTATTTGGTGCTGCGCTACTGTATGATGAGACATCAGCTACTTTTGATTGGTTGTTTACAACTTTTTTGAAGTGTATGTCCAATAAGAAACCTCAAACCATATACACAGACCAGGCTAGTGCGTTGTTGAAGTCAATTCCGAATGTTTTTCAAGGTGTTTTTCATGGTCTTTGCTCATGGCACATGGGAGAGAATGCAAAGAAAAATCTCGGCTCTCGTGCAAACAGTGCATTTTTCGATGAGTTAACTAATTTGGTTTCAAATGTCGAAGATGAATCAGATTTCGACTACAATTGGGATCAGATGATGAAAAACTATTTTAATGGAAGGCCTACTTCGGACTTTAAGTGGCTTGTTCAAACTCATTCAAATCGTATGCATTGGTCTTCAGTTTGGGTGAGGTCACATTTTACAGCTGGTTTGAAAACGACACAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGAATTTTTGCAGCCAGACCATTCACTTGTTCGATTCTTTAGTCATTTCAACATTATGGTTCAGAGAATGAGGGATAATCATGCTGAGTTGGACTTTAAGGCTGCAAACACTAGAACAAAAAATAATTATCCCAACAGTCAGCTTATGCGGTCCGTAGTAAACAAGTATACACCATCTTGCTTTTCATTTATTCACAGTCAGTATGACCTTTCCTTCAAATACTATTATGAGGAGGACACAACAAAAGGGTCTGAATTGAACAAGTTCTTCAAAGTTTTCACAATTGAAAAGGTTGATTATAATTACGATGATGTTGATAATGATAATGAGAGGGTTTCGAATGTTGATGTTTTGGATGCAGAATTTGAAGAAAACCTTTCCCCAAGGTTTGAAGATCATAATCGACTTGATGAAAGGGTTGTCACAGTCGACATTAGGAGCAAAAGTTTTACTTGTTCATGTCGTATGTTTGAGAACCGGGGTTTCTTATGTCGACATGTTTTCAAGATTTTGGAGGTCTTAGGTGGTCATGTGCAATATCATTTTTTGAAGACTATACCTGCACAATATGTTTTAAAGCGGTGGACTAGAGATGTGCGTCCGTCTGTCGATAAGCTGAAATCCACCATGAATGTTGGCACTAAAGACACCACTCAAGCACAACGATATCAACAAATTTGTGCTGTTACAGTTCAGCTTTCTACACGTGTTTGCGCAGATGCGGAGGCATCTGAAATATTTCTCAACGGTGTTCTTGAGGCAGGGAAAAAGGCAGAGGAGTTTCTTATTTCTAAAGGTATTCATACAGATCGATCATCCGTTACGCCTTCTAAGTCTTCAAAAGCAGTTGCTGTCTATGAACCATCTGTTGGGACTGCACCAAAGTTCAAAGAAAGACCAAATCCAATTAGGTCAAAGAAGCGACTTAAAAGTGATTATGAAAAAGCTTGA
Protein sequence

>Msa0539800

MDLILTSSESGQLTVENSVIDADSSQCYSFSNKESWKSLVFKSIKEIEDFYFNYAYNTGFSVRSMLKSKNNSQNKKSDKVHYVRYACNKEGFKKGSLLNPKNRPTCDSPVLVEYEKAKEKPEERVGCKAGIYLKLDEALNVYKIYKWEVDHCHPLHKPEHLCYLRSFREVNEVQGQLALINSKAGMSMRTSYEAMGQGVGGTENLPFRFSDLKNYLMTTRQKEMVAGEATVIQEFFRNEALSKPGFYYDIQVDAAEDIASIFWADGIMQQDYALFGDVVSFDTTYRTNNKYRPLAAFLGFDNHRKSVLFGAALLYDETSATFDWLFTTFLKCMSNKKPQTIYTDQASALLKSIPNVFQGVFHGLCSWHMGENAKKNLGSRANSAFFDELTNLVSNVEDESDFDYNWDQMMKNYFNGRPTSDFKWLVQTHSNRMHWSSVWVRSHFTAGLKTTQLSESFNAFLREFLQPDHSLVRFFSHFNIMVQRMRDNHAELDFKAANTRTKNNYPNSQLMRSVVNKYTPSCFSFIHSQYDLSFKYYYEEDTTKGSELNKFFKVFTIEKVDYNYDDVDNDNERVSNVDVLDAEFEENLSPRFEDHNRLDERVVTVDIRSKSFTCSCRMFENRGFLCRHVFKILEVLGGHVQYHFLKTIPAQYVLKRWTRDVRPSVDKLKSTMNVGTKDTTQAQRYQQICAVTVQLSTRVCADAEASEIFLNGVLEAGKKAEEFLISKGIHTDRSSVTPSKSSKAVAVYEPSVGTAPKFKERPNPIRSKKRLKSDYEKA*