AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0540630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0540630 MtrunA17_Chr4g0018391 92.958 355 15 2 1 354 1 346 0.0 689
Msa0540630 MtrunA17_Chr4g0056541 60.372 376 106 12 1 352 1 357 8.32e-144 411
Msa0540630 MtrunA17_Chr5g0398971 62.270 326 84 12 1 315 1 298 3.14e-135 389
Msa0540630 MtrunA17_Chr5g0405211 57.143 322 94 8 5 315 6 294 1.93e-107 318
Msa0540630 MtrunA17_Chr8g0372121 50.456 329 99 5 5 325 4 276 4.11e-106 313
Msa0540630 MtrunA17_Chr1g0200561 77.564 156 35 0 1 156 13 168 4.70e-90 274
Msa0540630 MtrunA17_Chr8g0346001 46.591 352 142 9 1 320 9 346 9.64e-90 276
Msa0540630 MtrunA17_Chr2g0309331 45.338 311 138 8 7 311 10 294 1.22e-83 257
Msa0540630 MtrunA17_Chr4g0017921 64.324 185 60 3 7 191 8 186 7.88e-81 250
Msa0540630 MtrunA17_Chr6g0484441 50.262 191 89 2 7 194 5 192 6.33e-62 201
Msa0540630 MtrunA17_Chr2g0309891 54.839 155 66 2 7 158 6 159 7.61e-60 196
Msa0540630 MtrunA17_Chr3g0091921 58.228 158 57 3 7 159 16 169 1.46e-59 194
Msa0540630 MtrunA17_Chr6g0481091 55.921 152 64 2 7 156 6 156 1.52e-59 192
Msa0540630 MtrunA17_Chr4g0060931 57.792 154 58 3 7 156 17 167 5.52e-59 194
Msa0540630 MtrunA17_Chr2g0316971 55.280 161 63 3 5 159 21 178 4.92e-58 192
Msa0540630 MtrunA17_Chr3g0109821 54.902 153 65 2 7 156 6 157 1.01e-57 198
Msa0540630 MtrunA17_Chr6g0453451 40.323 310 145 12 7 299 20 306 1.62e-57 189
Msa0540630 MtrunA17_Chr1g0183741 46.766 201 88 5 7 204 10 194 2.07e-57 187
Msa0540630 MtrunA17_Chr8g0361731 44.550 211 99 5 9 204 16 223 1.62e-56 189
Msa0540630 MtrunA17_Chr2g0312321 43.033 244 120 6 5 242 9 239 1.95e-56 186
Msa0540630 MtrunA17_Chr1g0147421 56.209 153 61 3 7 156 27 176 7.20e-56 186
Msa0540630 MtrunA17_Chr7g0252971 49.701 167 66 3 5 156 6 169 1.58e-55 184
Msa0540630 MtrunA17_Chr3g0139331 53.289 152 66 2 7 156 11 159 6.30e-55 183
Msa0540630 MtrunA17_Chr7g0253011 53.797 158 62 3 7 156 17 171 7.53e-55 184
Msa0540630 MtrunA17_Chr5g0417791 51.250 160 69 2 7 160 3 159 1.19e-54 180
Msa0540630 MtrunA17_Chr4g0042561 51.572 159 68 2 5 157 7 162 1.40e-54 180
Msa0540630 MtrunA17_Chr5g0433781 54.605 152 66 3 7 156 6 156 1.58e-54 189
Msa0540630 MtrunA17_Chr7g0261411 53.289 152 64 3 5 154 8 154 7.13e-54 179
Msa0540630 MtrunA17_Chr7g0217721 53.939 165 56 3 10 157 22 183 8.32e-54 181
Msa0540630 MtrunA17_Chr5g0417001 48.256 172 74 3 7 166 14 182 8.65e-54 181
Msa0540630 MtrunA17_Chr7g0214071 54.902 153 61 3 7 157 15 161 1.68e-53 177
Msa0540630 MtrunA17_Chr3g0130731 48.824 170 76 4 7 171 7 170 4.23e-53 177
Msa0540630 MtrunA17_Chr6g0453131 48.214 168 72 4 1 156 9 173 3.41e-52 177
Msa0540630 MtrunA17_Chr8g0384721 50.955 157 67 3 7 157 7 159 3.46e-52 174
Msa0540630 MtrunA17_Chr4g0047841 43.137 204 83 5 6 182 14 211 7.37e-52 175
Msa0540630 MtrunA17_Chr2g0318101 46.927 179 75 5 6 169 14 187 1.18e-51 175
Msa0540630 MtrunA17_Chr5g0400461 49.686 159 71 3 5 156 4 160 1.23e-51 174
Msa0540630 MtrunA17_Chr5g0428991 53.503 157 70 3 3 157 21 176 1.77e-51 181
Msa0540630 MtrunA17_Chr2g0318081 50.658 152 70 2 7 156 16 164 2.01e-51 174
Msa0540630 MtrunA17_Chr3g0124761 49.057 159 72 3 6 159 6 160 1.10e-50 171
Msa0540630 MtrunA17_Chr3g0128111 52.349 149 68 2 10 156 45 192 1.33e-50 169
Msa0540630 MtrunA17_Chr3g0130101 51.656 151 68 3 9 156 9 157 1.49e-50 172
Msa0540630 MtrunA17_Chr6g0461661 49.359 156 70 3 7 156 18 170 1.64e-50 172
Msa0540630 MtrunA17_Chr7g0217711 60.630 127 47 1 10 136 22 145 1.80e-50 166
Msa0540630 MtrunA17_Chr7g0263931 40.417 240 118 6 6 225 10 244 2.27e-50 171
Msa0540630 MtrunA17_Chr4g0054791 49.133 173 77 4 5 167 4 175 3.54e-50 170
Msa0540630 MtrunA17_Chr3g0144271 57.463 134 51 3 7 137 23 153 1.60e-49 171
Msa0540630 MtrunA17_Chr8g0359921 48.701 154 72 2 7 156 14 164 3.92e-49 167
Msa0540630 MtrunA17_Chr3g0128151 51.282 156 73 3 3 156 18 172 6.21e-49 173
Msa0540630 MtrunA17_Chr2g0326361 49.123 171 70 5 8 168 15 178 6.29e-49 167
Msa0540630 MtrunA17_Chr1g0197351 51.266 158 64 4 9 156 44 198 1.60e-48 170
Msa0540630 MtrunA17_Chr2g0311661 45.614 171 73 4 7 159 20 188 1.55e-47 162
Msa0540630 MtrunA17_Chr2g0311651 45.087 173 75 4 7 161 21 191 1.79e-47 163
Msa0540630 MtrunA17_Chr1g0201021 49.333 150 73 2 9 156 21 169 2.55e-47 168
Msa0540630 MtrunA17_Chr3g0092671 50.000 150 72 3 9 156 7 155 6.00e-47 167
Msa0540630 MtrunA17_Chr5g0442771 43.333 180 80 4 7 167 18 194 1.13e-46 160
Msa0540630 MtrunA17_Chr4g0076731 47.682 151 75 2 7 156 54 201 5.47e-46 162
Msa0540630 MtrunA17_Chr1g0197361 49.669 151 71 4 9 156 10 158 2.29e-45 163
Msa0540630 MtrunA17_Chr8g0364791 42.135 178 93 5 9 179 8 182 3.44e-45 160
Msa0540630 MtrunA17_Chr4g0038751 44.586 157 78 3 9 162 17 167 8.12e-45 155
Msa0540630 MtrunA17_Chr8g0384201 41.899 179 94 5 9 180 8 183 2.40e-44 159
Msa0540630 MtrunA17_Chr8g0385991 47.205 161 71 4 2 153 9 164 1.64e-42 147
Msa0540630 MtrunA17_Chr3g0131911 42.857 168 79 4 2 157 9 171 2.53e-39 139
Msa0540630 MtrunA17_Chr4g0026141 44.304 158 74 6 8 154 6 160 5.26e-37 134
Msa0540630 MtrunA17_Chr8g0345671 46.203 158 74 6 2 153 3 155 1.31e-36 136
Msa0540630 MtrunA17_Chr8g0345691 45.455 154 76 5 3 153 8 156 9.21e-36 134
Msa0540630 MtrunA17_Chr3g0113001 50.400 125 55 3 51 168 4 128 1.05e-35 131
Msa0540630 MtrunA17_Chr7g0266701 35.111 225 115 9 7 202 4 226 5.48e-34 126
Msa0540630 MtrunA17_Chr2g0321631 41.509 159 78 6 8 154 5 160 1.72e-33 124
Msa0540630 MtrunA17_Chr4g0050701 38.125 160 78 4 7 156 11 159 1.23e-31 117
Msa0540630 MtrunA17_Chr2g0321741 44.094 127 64 3 27 153 12 131 9.09e-31 119
Msa0540630 MtrunA17_Chr3g0113031 51.923 104 40 2 73 168 3 104 9.61e-30 115
Msa0540630 MtrunA17_Chr8g0345711 43.846 130 68 4 7 133 12 139 2.59e-28 108
Msa0540630 MtrunA17_Chr8g0345701 39.333 150 70 6 1 133 1 146 5.70e-25 99.8
Msa0540630 MtrunA17_Chr8g0345731 40.152 132 73 4 7 133 24 154 3.88e-24 97.4
Msa0540630 MtrunA17_Chr8g0384351 36.994 173 79 8 7 177 10 154 2.67e-23 95.5
Msa0540630 MtrunA17_Chr7g0243371 46.809 94 45 3 51 140 4 96 5.40e-22 89.7
Msa0540630 MtrunA17_Chr8g0345721 35.802 162 72 5 10 140 38 198 1.13e-21 91.7
Msa0540630 MtrunA17_Chr8g0345741 42.857 119 63 4 18 133 2 118 1.30e-20 87.4
Msa0540630 MtrunA17_Chr7g0251651 28.931 159 108 4 7 164 18 172 3.29e-16 76.3
Msa0540630 MtrunA17_Chr3g0130321 30.488 164 89 7 7 155 7 160 1.18e-14 72.0
Msa0540630 MtrunA17_Chr7g0251661 30.469 128 84 4 7 133 10 133 9.85e-14 68.2
Msa0540630 MtrunA17_Chr4g0040541 29.480 173 95 7 1 154 42 206 3.19e-12 66.2
Msa0540630 MtrunA17_Chr7g0251671 28.788 132 89 4 7 137 10 137 5.93e-12 63.5
Msa0540630 MtrunA17_Chr7g0274971 28.659 164 103 7 13 170 11 166 8.48e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0540630 AT1G12260.1 61.364 352 95 11 1 318 1 345 7.45e-139 400
Msa0540630 AT1G12260.2 61.562 320 93 9 1 318 1 292 7.85e-130 375
Msa0540630 AT1G62700.1 56.334 371 105 14 1 334 1 351 6.60e-127 370
Msa0540630 AT1G62700.2 56.334 371 105 14 1 334 1 351 6.60e-127 370
Msa0540630 AT4G36160.2 52.802 339 137 6 7 334 14 340 8.91e-112 331
Msa0540630 AT4G36160.1 52.802 339 137 6 7 334 10 336 8.92e-112 330
Msa0540630 AT4G36160.3 52.802 339 137 6 7 334 10 336 8.92e-112 330
Msa0540630 AT2G18060.3 54.217 332 119 9 7 329 9 316 2.33e-108 322
Msa0540630 AT2G18060.1 54.217 332 119 9 7 329 9 316 2.33e-108 322
Msa0540630 AT5G62380.2 49.284 349 121 9 1 327 1 315 5.99e-106 315
Msa0540630 AT5G62380.1 49.284 349 121 9 1 327 1 315 5.99e-106 315
Msa0540630 AT5G66300.1 50.784 319 110 6 7 316 12 292 1.28e-101 301
Msa0540630 AT2G46770.1 49.254 335 92 12 1 312 10 289 4.47e-88 270
Msa0540630 AT3G61910.1 44.857 350 112 9 1 328 5 295 3.03e-85 261
Msa0540630 AT1G71930.2 72.727 154 42 0 5 158 7 160 2.00e-84 259
Msa0540630 AT1G71930.1 72.727 154 42 0 5 158 7 160 2.00e-84 259
Msa0540630 AT4G10350.1 43.519 324 158 8 7 324 9 313 7.11e-80 248
Msa0540630 AT1G32770.1 68.639 169 41 1 1 157 10 178 1.52e-79 248
Msa0540630 AT1G33280.1 72.185 151 41 1 7 157 8 157 2.75e-79 245
Msa0540630 AT1G79580.3 74.342 152 37 2 7 157 17 167 2.37e-78 245
Msa0540630 AT1G79580.5 74.342 152 37 2 7 157 17 167 2.37e-78 245
Msa0540630 AT1G79580.4 74.342 152 37 2 7 157 17 167 2.37e-78 245
Msa0540630 AT1G79580.2 74.342 152 37 2 7 157 17 167 2.37e-78 245
Msa0540630 AT1G79580.1 74.342 152 37 2 7 157 17 167 2.37e-78 245
Msa0540630 AT3G18400.1 59.211 152 58 2 6 156 4 152 5.28e-62 201
Msa0540630 AT3G17730.1 56.579 152 63 2 7 156 6 156 3.37e-60 194
Msa0540630 AT5G39610.1 56.548 168 64 4 7 169 20 183 2.26e-59 193
Msa0540630 AT2G24430.2 57.325 157 61 3 7 160 16 169 3.44e-59 194
Msa0540630 AT2G24430.1 57.325 157 61 3 7 160 16 169 3.44e-59 194
Msa0540630 AT5G61430.1 56.774 155 58 3 7 156 16 166 1.02e-58 193
Msa0540630 AT1G69490.1 51.829 164 70 2 5 162 7 167 4.96e-58 189
Msa0540630 AT5G07680.2 56.129 155 59 3 7 156 3 153 1.21e-57 190
Msa0540630 AT5G07680.1 56.129 155 59 3 7 156 17 167 2.06e-57 189
Msa0540630 AT3G04060.1 45.755 212 97 6 7 208 20 223 2.29e-57 190
Msa0540630 AT1G76420.1 57.792 154 57 4 7 156 22 171 2.72e-57 189
Msa0540630 AT1G65910.1 55.263 152 65 2 7 156 6 156 3.01e-57 196
Msa0540630 AT5G17260.1 53.548 155 68 2 7 158 6 159 1.63e-56 191
Msa0540630 AT3G03200.1 54.194 155 67 2 7 158 6 159 1.97e-56 191
Msa0540630 AT3G10490.1 54.194 155 67 2 5 156 25 178 2.29e-56 184
Msa0540630 AT1G54330.1 55.696 158 68 2 7 164 6 161 2.31e-56 186
Msa0540630 AT3G29035.1 53.659 164 69 2 7 166 24 184 3.55e-56 186
Msa0540630 AT3G10480.1 54.902 153 65 2 7 156 27 178 3.87e-56 189
Msa0540630 AT3G12977.1 44.340 212 95 4 5 196 16 224 8.44e-56 184
Msa0540630 AT3G10490.2 55.629 151 63 2 9 156 29 178 3.57e-55 187
Msa0540630 AT5G46590.1 53.571 168 70 5 5 165 4 170 4.65e-55 182
Msa0540630 AT3G04070.2 50.602 166 65 3 5 156 8 170 8.13e-55 183
Msa0540630 AT5G53950.1 51.786 168 72 3 6 167 16 180 1.25e-54 184
Msa0540630 AT5G18270.2 51.807 166 71 5 7 166 21 183 2.18e-54 182
Msa0540630 AT5G18270.1 51.807 166 71 5 7 166 21 183 2.20e-54 182
Msa0540630 AT3G10480.2 54.902 153 64 3 7 156 27 177 3.12e-54 184
Msa0540630 AT4G35580.1 54.487 156 68 2 3 156 5 159 6.06e-54 185
Msa0540630 AT4G35580.3 54.487 156 68 2 3 156 5 159 7.73e-54 186
Msa0540630 AT4G35580.2 54.487 156 68 2 3 156 5 159 8.13e-54 185
Msa0540630 AT1G56010.2 50.303 165 71 4 5 162 17 177 9.15e-54 180
Msa0540630 AT3G15170.1 54.430 158 63 3 5 156 18 172 9.73e-54 179
Msa0540630 AT5G63790.1 47.283 184 76 4 6 172 49 228 1.19e-53 179
Msa0540630 AT5G63790.2 47.283 184 76 4 6 172 59 238 1.27e-53 179
Msa0540630 AT4G10350.2 40.143 279 142 8 52 324 7 266 4.57e-53 177
Msa0540630 AT4G27410.2 51.316 152 69 2 7 156 14 162 6.63e-53 177
Msa0540630 AT5G04410.1 44.560 193 95 6 2 186 4 192 2.13e-52 182
Msa0540630 AT1G33060.2 54.605 152 66 3 7 156 24 174 2.24e-52 184
Msa0540630 AT1G33060.1 54.605 152 66 3 7 156 24 174 2.89e-52 183
Msa0540630 AT5G46590.2 58.088 136 55 2 5 139 4 138 4.28e-52 174
Msa0540630 AT2G43000.1 50.968 155 69 4 9 160 20 170 8.06e-52 173
Msa0540630 AT1G01720.1 44.565 184 89 4 1 178 1 177 1.06e-51 174
Msa0540630 AT5G08790.1 49.398 166 73 4 1 159 1 162 1.23e-51 173
Msa0540630 AT3G10500.1 40.724 221 107 6 2 201 4 221 3.32e-51 179
Msa0540630 AT4G27410.3 48.193 166 70 3 7 156 14 179 5.70e-51 172
Msa0540630 AT1G26870.1 47.093 172 73 4 9 166 18 185 6.18e-51 175
Msa0540630 AT3G04070.1 46.703 182 64 4 5 156 8 186 6.46e-51 174
Msa0540630 AT1G77450.1 46.471 170 82 3 6 170 9 174 7.65e-51 170
Msa0540630 AT5G39820.1 44.571 175 69 3 7 156 20 191 1.09e-50 172
Msa0540630 AT2G33480.2 50.000 152 70 1 6 157 14 159 1.19e-50 170
Msa0540630 AT3G15500.1 48.718 156 75 2 7 160 14 166 1.22e-50 172
Msa0540630 AT4G17980.1 53.165 158 67 5 5 156 4 160 1.24e-50 170
Msa0540630 AT3G10480.3 46.237 186 63 4 7 156 27 211 1.88e-50 176
Msa0540630 AT4G17980.2 53.165 158 67 5 5 156 4 160 2.27e-50 170
Msa0540630 AT1G61110.1 49.102 167 65 5 6 156 15 177 3.16e-50 171
Msa0540630 AT1G52890.1 48.718 156 75 2 7 160 14 166 4.19e-50 170
Msa0540630 AT5G24590.2 48.889 180 88 4 3 179 9 187 5.13e-50 174
Msa0540630 AT2G33480.1 50.000 154 69 2 6 157 14 161 9.39e-50 168
Msa0540630 AT4G28530.1 47.953 171 64 5 5 156 8 172 3.32e-49 169
Msa0540630 AT3G49530.2 51.634 153 70 4 7 156 13 164 4.68e-49 170
Msa0540630 AT3G49530.1 51.634 153 70 4 7 156 13 164 9.65e-49 171
Msa0540630 AT2G18060.2 44.538 238 103 8 88 316 2 219 3.35e-48 164
Msa0540630 AT3G15510.1 48.447 161 65 4 11 156 21 178 6.05e-47 163
Msa0540630 AT2G02450.1 47.682 151 75 2 7 156 51 198 1.35e-46 162
Msa0540630 AT2G02450.2 47.682 151 75 2 7 156 51 198 1.58e-46 163
Msa0540630 AT5G13180.1 47.170 159 75 4 2 157 9 161 2.07e-46 159
Msa0540630 AT1G32510.1 46.296 162 76 3 5 156 4 164 2.26e-46 159
Msa0540630 AT1G34180.3 45.333 150 79 2 9 156 18 166 5.53e-46 162
Msa0540630 AT2G27300.1 47.682 151 72 3 5 155 12 155 1.70e-45 159
Msa0540630 AT1G34180.1 45.333 150 79 2 9 156 18 166 2.33e-45 163
Msa0540630 AT1G34190.1 47.682 151 74 3 9 156 18 166 6.32e-45 162
Msa0540630 AT5G64060.1 32.979 282 160 8 5 278 4 264 1.86e-44 156
Msa0540630 AT5G09330.5 39.487 195 112 4 5 196 4 195 2.92e-44 159
Msa0540630 AT5G09330.2 39.487 195 112 4 5 196 4 195 2.92e-44 159
Msa0540630 AT5G09330.4 39.487 195 112 4 5 196 4 195 2.92e-44 159
Msa0540630 AT5G09330.3 39.487 195 112 4 5 196 4 195 2.92e-44 159
Msa0540630 AT5G09330.1 39.487 195 112 4 5 196 4 195 2.92e-44 159
Msa0540630 AT2G17040.1 43.312 157 80 4 9 162 8 158 6.09e-44 153
Msa0540630 AT1G52880.1 46.707 167 72 3 11 163 21 184 1.99e-43 153
Msa0540630 AT1G34180.4 41.615 161 81 2 9 156 18 178 4.78e-43 155
Msa0540630 AT5G22290.1 44.966 149 76 2 5 153 19 161 7.95e-43 152
Msa0540630 AT1G34180.2 41.615 161 81 2 9 156 18 178 1.68e-42 155
Msa0540630 AT3G12910.1 43.605 172 72 5 9 160 23 189 6.42e-42 148
Msa0540630 AT5G04395.1 46.053 152 69 3 5 143 26 177 2.56e-41 143
Msa0540630 AT3G44290.2 44.800 125 67 1 9 133 16 138 1.60e-38 137
Msa0540630 AT5G61430.2 61.616 99 32 2 63 156 6 103 2.43e-38 138
Msa0540630 AT3G12977.2 43.030 165 71 4 52 196 10 171 2.88e-38 136
Msa0540630 AT3G44290.1 44.800 125 67 1 9 133 16 138 9.78e-38 138
Msa0540630 AT1G32870.2 44.156 154 79 3 7 156 10 160 4.00e-37 140
Msa0540630 AT1G32870.1 44.156 154 79 3 7 156 10 160 4.33e-37 140
Msa0540630 AT1G32870.3 44.156 154 79 3 7 156 46 196 6.40e-37 140
Msa0540630 AT1G56010.1 55.769 104 39 2 65 162 8 110 8.46e-37 134
Msa0540630 AT2G33480.3 50.000 102 49 1 58 157 3 104 9.43e-31 116
Msa0540630 AT5G22380.1 44.275 131 63 5 10 133 8 135 4.05e-29 112
Msa0540630 AT3G44350.2 39.103 156 83 8 10 156 8 160 1.60e-27 108
Msa0540630 AT3G44350.1 41.221 131 68 5 10 134 8 135 6.00e-27 104
Msa0540630 AT4G01520.1 36.424 151 87 5 8 153 5 151 1.72e-26 107
Msa0540630 AT4G28530.2 34.911 169 52 4 5 156 8 135 3.14e-26 107
Msa0540630 AT5G64530.1 35.088 171 78 5 7 159 3 158 3.26e-26 103
Msa0540630 AT4G01550.1 36.842 152 86 5 10 156 7 153 1.76e-25 107
Msa0540630 AT4G01540.4 36.242 149 86 5 10 153 7 151 2.18e-25 105
Msa0540630 AT4G01540.3 36.242 149 86 5 10 153 7 151 2.57e-25 106
Msa0540630 AT4G01540.2 36.242 149 86 5 10 153 7 151 3.32e-25 105
Msa0540630 AT4G01540.1 36.242 149 86 5 10 153 7 151 3.74e-25 106
Msa0540630 AT1G02250.1 46.565 131 61 5 8 133 4 130 4.60e-25 104
Msa0540630 AT1G02230.1 45.802 131 62 6 8 133 4 130 5.34e-25 104
Msa0540630 AT3G04420.2 42.636 129 69 3 8 133 4 130 6.62e-25 102
Msa0540630 AT5G64530.2 41.221 131 60 4 7 135 3 118 6.78e-25 99.4
Msa0540630 AT3G04420.1 42.636 129 69 3 8 133 4 130 2.13e-24 102
Msa0540630 AT2G43000.2 48.913 92 43 3 72 160 2 92 9.81e-23 94.7
Msa0540630 AT3G10490.4 54.545 77 32 1 83 156 2 78 1.18e-22 97.8
Msa0540630 AT3G10490.3 54.545 77 32 1 83 156 2 78 1.18e-22 97.8
Msa0540630 AT1G02220.1 40.769 130 69 4 7 133 3 127 4.80e-20 90.9
Msa0540630 AT1G01010.1 33.974 156 83 7 10 153 6 153 1.87e-19 89.4
Msa0540630 AT5G50820.1 37.410 139 62 6 6 135 16 138 1.37e-18 83.2
Msa0540630 AT3G56530.1 28.188 149 103 2 8 154 53 199 6.97e-18 83.6
Msa0540630 AT5G22290.2 44.928 69 34 1 89 157 2 66 7.40e-16 76.6
Msa0540630 AT5G14000.1 27.673 159 107 3 1 157 9 161 2.56e-14 71.6
Msa0540630 AT5G14000.2 29.771 131 85 2 7 135 15 140 2.67e-14 70.1
Msa0540630 AT3G55210.1 27.329 161 100 5 7 154 11 167 7.28e-14 71.6
Msa0540630 AT3G04430.1 35.075 134 70 6 13 133 6 135 1.04e-11 63.9
Msa0540630 AT1G28470.1 27.976 168 91 7 7 154 77 234 6.99e-11 63.2

Find 61 sgRNAs with CRISPR-Local

Find 151 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGATACTTCTTATCTTTA+TGG 0.078281 4_1:-23282876 None:intergenic
CAATATTGAATTCAGAAATT+TGG 0.125999 4_1:+23284588 Msa0540630:CDS
GAGCAACTGCAGCTGGATTT+TGG 0.212597 4_1:+23282917 Msa0540630:CDS
ACCATCTTATTCTTGCAAAA+AGG 0.259121 4_1:+23284204 Msa0540630:CDS
TAATTGTTGGTATATCAAAT+TGG 0.305571 4_1:-23284182 None:intergenic
AATTGTCACGAGACATGTTT+TGG 0.317098 4_1:-23284246 None:intergenic
TGTTGTAACCATTGGATTAG+AGG 0.334393 4_1:-23284326 None:intergenic
TTTAAAGAGATTTGCAGAAT+AGG 0.347878 4_1:+23282820 Msa0540630:intron
AATAATAACAACATCTTTCA+TGG 0.348154 4_1:+23284565 Msa0540630:CDS
CAAAACTTTCATTCTATGTA+TGG 0.349941 4_1:+23284433 Msa0540630:CDS
GAAGAAGATTGAACAAGCTT+TGG 0.352286 4_1:-23284295 None:intergenic
AGTTTCATTCATGCAAGATA+TGG 0.353877 4_1:+23284135 Msa0540630:CDS
TATAGTAAACATAATTTGAT+AGG 0.375654 4_1:+23282967 Msa0540630:CDS
AAAGATAAGAAGTATCCAAC+TGG 0.410251 4_1:+23282880 Msa0540630:CDS
CTATTTGTTCTTGTCCCAGT+TGG 0.412869 4_1:-23282895 None:intergenic
AGGCTTGAAACAGATGAAAA+TGG 0.413374 4_1:+23283066 Msa0540630:CDS
GATAGGAATGAGGAAAACTT+TGG 0.414183 4_1:+23282984 Msa0540630:CDS
CAAACACAAGTTGGATATGA+TGG 0.442162 4_1:+23284650 Msa0540630:CDS
TCAAATTGGATTGAGAGGTT+TGG 0.444509 4_1:-23284168 None:intergenic
GTGTCATATGTTGTAACCAT+TGG 0.449797 4_1:-23284334 None:intergenic
ACAAATAGAGCAACTGCAGC+TGG 0.455592 4_1:+23282910 Msa0540630:CDS
AAGAATAAGATGGTAATTGT+TGG 0.460455 4_1:-23284195 None:intergenic
GGAAGAAAATTGCTTCAAGA+AGG 0.460849 4_1:+23282176 Msa0540630:CDS
CCTCTACATCAAACACAAGT+TGG 0.475978 4_1:+23284641 Msa0540630:CDS
TTCCAATGTTGAACAAGGTA+TGG 0.483739 4_1:+23284462 Msa0540630:CDS
CCAACTTGTGTTTGATGTAG+AGG 0.486977 4_1:-23284641 None:intergenic
TTGGATTGAGAGGTTTGGTT+TGG 0.487041 4_1:-23284163 None:intergenic
ATTGGATAATGCATGAGTAT+AGG 0.487765 4_1:+23283046 Msa0540630:CDS
AACCATACCTTGTTCAACAT+TGG 0.489325 4_1:-23284464 None:intergenic
GTGAGCATGACTCTCCTTGT+TGG 0.496787 4_1:+23284101 Msa0540630:CDS
CCAATGGACAAAAGTCAGAT+TGG 0.499786 4_1:+23283028 Msa0540630:CDS
ATTGAACCATGGGATCTTGA+AGG 0.503378 4_1:+23282238 Msa0540630:CDS
TTGATGATCAAGTTACTGAT+TGG 0.505048 4_1:+23284485 Msa0540630:CDS
GTTTGGAGCAGGAGGAAGGA+TGG 0.509198 4_1:+23284026 Msa0540630:intron
AACTTGTGGATTACTACCTT+AGG 0.520831 4_1:+23282155 Msa0540630:CDS
GACGGTTTGGAGCAGGAGGA+AGG 0.522417 4_1:+23284022 Msa0540630:intron
TCTTTACAAAATTGAACCAT+GGG 0.529954 4_1:+23282228 Msa0540630:CDS
TGGGATGGAACCTAAACCCC+GGG 0.538292 4_1:-23282123 None:intergenic
TCCCACAGATGAGGAACTTG+TGG 0.541887 4_1:+23282141 Msa0540630:CDS
TTTGGAGCAGGAGGAAGGAT+GGG 0.544311 4_1:+23284027 Msa0540630:intron
AACATAATTTGATAGGAATG+AGG 0.544431 4_1:+23282974 Msa0540630:CDS
GTATATCAAATTGGATTGAG+AGG 0.548657 4_1:-23284173 None:intergenic
ATCCACAAGTTCCTCATCTG+TGG 0.551212 4_1:-23282143 None:intergenic
ATCTTTACAAAATTGAACCA+TGG 0.552731 4_1:+23282227 Msa0540630:CDS
CTTATACCTTCAAGATCCCA+TGG 0.563913 4_1:-23282244 None:intergenic
TCTTGTAAGAGCATTGATGA+AGG 0.569946 4_1:-23284382 None:intergenic
AGCTTTGGACTCTCTAGAAG+TGG 0.581594 4_1:-23284280 None:intergenic
CAAGTTCCTCATCTGTGGGA+TGG 0.581878 4_1:-23282138 None:intergenic
TCCACAAGTTCCTCATCTGT+GGG 0.587470 4_1:-23282142 None:intergenic
AAACACAACCTCTAATCCAA+TGG 0.587516 4_1:+23284318 Msa0540630:CDS
TAGGTTCCATCCCACAGATG+AGG 0.602397 4_1:+23282132 Msa0540630:CDS
AGATGAAAATGGCACACCAC+AGG 0.603920 4_1:+23283077 Msa0540630:CDS
TATAAAGGTCGAGCTCCCAA+TGG 0.627931 4_1:+23283012 Msa0540630:CDS
AACAATTCCAATGTTGAACA+AGG 0.643045 4_1:+23284457 Msa0540630:CDS
GTGGGATGGAACCTAAACCC+CGG 0.647443 4_1:-23282124 None:intergenic
GAACAGAAGAACAAAATGAG+TGG 0.656792 4_1:+23282842 Msa0540630:CDS
AAGATAAGAAGTATCCAACT+GGG 0.681306 4_1:+23282881 Msa0540630:CDS
ACTTGATCTTCATACCAACA+AGG 0.708859 4_1:-23284115 None:intergenic
GGATGGAACCTAAACCCCGG+GGG 0.731147 4_1:-23282121 None:intergenic
GAAGAACAAGTCTTACACAG+TGG 0.758920 4_1:+23284403 Msa0540630:CDS
GGGATGGAACCTAAACCCCG+GGG 0.785968 4_1:-23282122 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAAAAAGAAAAATAAAAA+AGG - chr4_1:23282799-23282818 None:intergenic 10.0%
!! TATAGTAAACATAATTTGAT+AGG + chr4_1:23282967-23282986 Msa0540630:CDS 15.0%
!! TTAAATACATAAACGAAAAA+GGG + chr4_1:23283209-23283228 Msa0540630:intron 15.0%
!! TCTAAATATATGTTTATAAG+TGG - chr4_1:23283549-23283568 None:intergenic 15.0%
!! ACTATTTAACAAGATTTCAT+AGG - chr4_1:23282483-23282502 None:intergenic 20.0%
!! TATAAACATGTGTTTATAAG+TGG + chr4_1:23282524-23282543 Msa0540630:intron 20.0%
!! ATAAACATGTGTTTATAAGT+GGG + chr4_1:23282525-23282544 Msa0540630:intron 20.0%
!!! AGATAATTTGATAACTAAAG+CGG - chr4_1:23282649-23282668 None:intergenic 20.0%
!!! AAAACTTTGGTGTTTTATAA+AGG + chr4_1:23282997-23283016 Msa0540630:CDS 20.0%
!! TCTCTAGATTTATTTAATGT+TGG + chr4_1:23283140-23283159 Msa0540630:intron 20.0%
!! CTTAAATACATAAACGAAAA+AGG + chr4_1:23283208-23283227 Msa0540630:intron 20.0%
!!! GTAATTCTCATTTTACAAAT+CGG - chr4_1:23283523-23283542 None:intergenic 20.0%
!!! AACAATAATAATTAGGGTTT+TGG - chr4_1:23283744-23283763 None:intergenic 20.0%
!! ATCGACAACAATAATAATTA+GGG - chr4_1:23283750-23283769 None:intergenic 20.0%
!!! ATGTTATAGATTAGTTTGTA+CGG + chr4_1:23283827-23283846 Msa0540630:intron 20.0%
!!! TTTGTTTTTGTTATTTTCGA+CGG + chr4_1:23284004-23284023 Msa0540630:intron 20.0%
!! TAATTGTTGGTATATCAAAT+TGG - chr4_1:23284185-23284204 None:intergenic 20.0%
!! AATAATAACAACATCTTTCA+TGG + chr4_1:23284565-23284584 Msa0540630:CDS 20.0%
!! CAATATTGAATTCAGAAATT+TGG + chr4_1:23284588-23284607 Msa0540630:CDS 20.0%
!! AAATTTGGAAAAACAAGAAA+TGG + chr4_1:23284603-23284622 Msa0540630:CDS 20.0%
! ATCTTTACAAAATTGAACCA+TGG + chr4_1:23282227-23282246 Msa0540630:CDS 25.0%
! TCTTTACAAAATTGAACCAT+GGG + chr4_1:23282228-23282247 Msa0540630:CDS 25.0%
!!! TGAACAACATTCTAGAATTT+TGG + chr4_1:23282437-23282456 Msa0540630:intron 25.0%
!! TGTTTATACCATATTTTGTC+CGG - chr4_1:23282512-23282531 None:intergenic 25.0%
! TAAACATGTGTTTATAAGTG+GGG + chr4_1:23282526-23282545 Msa0540630:intron 25.0%
! TTTAAAGAGATTTGCAGAAT+AGG + chr4_1:23282820-23282839 Msa0540630:intron 25.0%
! TTGGATACTTCTTATCTTTA+TGG - chr4_1:23282879-23282898 None:intergenic 25.0%
! AACATAATTTGATAGGAATG+AGG + chr4_1:23282974-23282993 Msa0540630:CDS 25.0%
!!! TTTACAAATCGGTTTTGTAA+TGG - chr4_1:23283512-23283531 None:intergenic 25.0%
! GCAATAGATAAGTCTAATAT+TGG - chr4_1:23283583-23283602 None:intergenic 25.0%
! AGTTGAAATCGTAATTTCTA+TGG + chr4_1:23283643-23283662 Msa0540630:intron 25.0%
! GATCGACAACAATAATAATT+AGG - chr4_1:23283751-23283770 None:intergenic 25.0%
!!! TGTTATAGATTAGTTTGTAC+GGG + chr4_1:23283828-23283847 Msa0540630:intron 25.0%
!!! TAACAAATGTTAGTCTTCAA+AGG - chr4_1:23283943-23283962 None:intergenic 25.0%
! AAGAATAAGATGGTAATTGT+TGG - chr4_1:23284198-23284217 None:intergenic 25.0%
! CAAAACTTTCATTCTATGTA+TGG + chr4_1:23284433-23284452 Msa0540630:CDS 25.0%
! TTGAAGCAATTTTCTTCCTA+AGG - chr4_1:23282174-23282193 None:intergenic 30.0%
! TTTGGAGTAATAGCAAAGTT+TGG - chr4_1:23282320-23282339 None:intergenic 30.0%
TGGTATAAAGAGTTCAATGT+TGG + chr4_1:23282457-23282476 Msa0540630:intron 30.0%
AAACATGTGTTTATAAGTGG+GGG + chr4_1:23282527-23282546 Msa0540630:intron 30.0%
!!! ACTTCAACAACCGATTTTTT+GGG + chr4_1:23282559-23282578 Msa0540630:intron 30.0%
CTAACACAATCCCAAAAAAT+CGG - chr4_1:23282572-23282591 None:intergenic 30.0%
!! AAAGATAAGAAGTATCCAAC+TGG + chr4_1:23282880-23282899 Msa0540630:CDS 30.0%
!! AAGATAAGAAGTATCCAACT+GGG + chr4_1:23282881-23282900 Msa0540630:CDS 30.0%
ATTGGATAATGCATGAGTAT+AGG + chr4_1:23283046-23283065 Msa0540630:CDS 30.0%
TTAATGAAATCACTTACCTG+TGG - chr4_1:23283096-23283115 None:intergenic 30.0%
!!! CTTACAAGTTCACTTTTTAG+GGG - chr4_1:23283284-23283303 None:intergenic 30.0%
!!! CCTTACAAGTTCACTTTTTA+GGG - chr4_1:23283285-23283304 None:intergenic 30.0%
!!! ACCTTACAAGTTCACTTTTT+AGG - chr4_1:23283286-23283305 None:intergenic 30.0%
GTGTTTATCCAACATTCATT+GGG - chr4_1:23283452-23283471 None:intergenic 30.0%
TGTGTTTATCCAACATTCAT+TGG - chr4_1:23283453-23283472 None:intergenic 30.0%
ACAAATATCATCTTCGTGTT+TGG + chr4_1:23283470-23283489 Msa0540630:intron 30.0%
GACATACACAACAAAATATG+AGG + chr4_1:23283668-23283687 Msa0540630:intron 30.0%
GATAAAGTTGTGTTAACTCT+TGG + chr4_1:23283784-23283803 Msa0540630:intron 30.0%
!! AGACATTGAGAGTATTAAGA+AGG - chr4_1:23283898-23283917 None:intergenic 30.0%
!!! TTTTGTTATTTTCGACGGTT+TGG + chr4_1:23284009-23284028 Msa0540630:intron 30.0%
AGTTTCATTCATGCAAGATA+TGG + chr4_1:23284135-23284154 Msa0540630:CDS 30.0%
GTATATCAAATTGGATTGAG+AGG - chr4_1:23284176-23284195 None:intergenic 30.0%
ACCATCTTATTCTTGCAAAA+AGG + chr4_1:23284204-23284223 Msa0540630:CDS 30.0%
! TCCTTTTTGCAAGAATAAGA+TGG - chr4_1:23284208-23284227 None:intergenic 30.0%
AACAATTCCAATGTTGAACA+AGG + chr4_1:23284457-23284476 Msa0540630:CDS 30.0%
! TTGATGATCAAGTTACTGAT+TGG + chr4_1:23284485-23284504 Msa0540630:CDS 30.0%
! AACTTGTGGATTACTACCTT+AGG + chr4_1:23282155-23282174 Msa0540630:CDS 35.0%
GGAAGAAAATTGCTTCAAGA+AGG + chr4_1:23282176-23282195 Msa0540630:CDS 35.0%
GAGTGTATTTATGTGCACTT+TGG - chr4_1:23282338-23282357 None:intergenic 35.0%
CATCGCGATCAAAATTATAG+CGG - chr4_1:23282367-23282386 None:intergenic 35.0%
CTTGTTAAATAGTCTCATGC+CGG + chr4_1:23282490-23282509 Msa0540630:intron 35.0%
AAAAATCGGTTGTTGAAGTG+AGG - chr4_1:23282558-23282577 None:intergenic 35.0%
!!! CACTTCAACAACCGATTTTT+TGG + chr4_1:23282558-23282577 Msa0540630:intron 35.0%
!!! CGATTTTTTGGGATTGTGTT+AGG + chr4_1:23282570-23282589 Msa0540630:intron 35.0%
GAACAGAAGAACAAAATGAG+TGG + chr4_1:23282842-23282861 Msa0540630:CDS 35.0%
GATAGGAATGAGGAAAACTT+TGG + chr4_1:23282984-23283003 Msa0540630:CDS 35.0%
! CAATCTGACTTTTGTCCATT+GGG - chr4_1:23283030-23283049 None:intergenic 35.0%
AGGCTTGAAACAGATGAAAA+TGG + chr4_1:23283066-23283085 Msa0540630:CDS 35.0%
! GTTTCAAACTCCGATACTTT+TGG - chr4_1:23283240-23283259 None:intergenic 35.0%
!!! AAGTTCACTTTTTAGGGGTT+GGG - chr4_1:23283279-23283298 None:intergenic 35.0%
CCCTAAAAAGTGAACTTGTA+AGG + chr4_1:23283282-23283301 Msa0540630:intron 35.0%
!! GGAAAAAGTTCTAAGACTCT+TGG - chr4_1:23283723-23283742 None:intergenic 35.0%
ACTTGATCTTCATACCAACA+AGG - chr4_1:23284118-23284137 None:intergenic 35.0%
TCAAATTGGATTGAGAGGTT+TGG - chr4_1:23284171-23284190 None:intergenic 35.0%
! AATTGTCACGAGACATGTTT+TGG - chr4_1:23284249-23284268 None:intergenic 35.0%
GAAGAAGATTGAACAAGCTT+TGG - chr4_1:23284298-23284317 None:intergenic 35.0%
AAACACAACCTCTAATCCAA+TGG + chr4_1:23284318-23284337 Msa0540630:CDS 35.0%
! TGTTGTAACCATTGGATTAG+AGG - chr4_1:23284329-23284348 None:intergenic 35.0%
GTGTCATATGTTGTAACCAT+TGG - chr4_1:23284337-23284356 None:intergenic 35.0%
!! TCTTGTAAGAGCATTGATGA+AGG - chr4_1:23284385-23284404 None:intergenic 35.0%
TTCCAATGTTGAACAAGGTA+TGG + chr4_1:23284462-23284481 Msa0540630:CDS 35.0%
AACCATACCTTGTTCAACAT+TGG - chr4_1:23284467-23284486 None:intergenic 35.0%
!!! TACTTTTTCTCATGTTCCCC+CGG + chr4_1:23282105-23282124 Msa0540630:CDS 40.0%
ATTGAACCATGGGATCTTGA+AGG + chr4_1:23282238-23282257 Msa0540630:CDS 40.0%
CTTATACCTTCAAGATCCCA+TGG - chr4_1:23282247-23282266 None:intergenic 40.0%
! TGTAGTTACCGTTGTTGTTG+TGG + chr4_1:23282287-23282306 Msa0540630:intron 40.0%
GAGCATAACCACAACAACAA+CGG - chr4_1:23282298-23282317 None:intergenic 40.0%
CTATTTGTTCTTGTCCCAGT+TGG - chr4_1:23282898-23282917 None:intergenic 40.0%
! CCAATCTGACTTTTGTCCAT+TGG - chr4_1:23283031-23283050 None:intergenic 40.0%
CCAATGGACAAAAGTCAGAT+TGG + chr4_1:23283028-23283047 Msa0540630:CDS 40.0%
! AAGGGTTTCGCCAAAAGTAT+CGG + chr4_1:23283227-23283246 Msa0540630:intron 40.0%
!!! CAAGTTCACTTTTTAGGGGT+TGG - chr4_1:23283280-23283299 None:intergenic 40.0%
!! GTTTGGAATGTGACTTGGTT+GGG + chr4_1:23283398-23283417 Msa0540630:intron 40.0%
AAGAGTGACCCAATGAATGT+TGG + chr4_1:23283441-23283460 Msa0540630:intron 40.0%
!! AAGTTCTAAGACTCTTGGCT+TGG - chr4_1:23283718-23283737 None:intergenic 40.0%
! AAAGGCGTAGTACAATGGTA+TGG - chr4_1:23283925-23283944 None:intergenic 40.0%
! TCTTCAAAGGCGTAGTACAA+TGG - chr4_1:23283930-23283949 None:intergenic 40.0%
! TTGGATTGAGAGGTTTGGTT+TGG - chr4_1:23284166-23284185 None:intergenic 40.0%
!!! CACGAGACATGTTTTGGAAT+GGG - chr4_1:23284243-23284262 None:intergenic 40.0%
!!! TCACGAGACATGTTTTGGAA+TGG - chr4_1:23284244-23284263 None:intergenic 40.0%
GAAGAACAAGTCTTACACAG+TGG + chr4_1:23284403-23284422 Msa0540630:CDS 40.0%
!!! GATGTAGAGGCATTTTCATG+AGG - chr4_1:23284631-23284650 None:intergenic 40.0%
CCAACTTGTGTTTGATGTAG+AGG - chr4_1:23284644-23284663 None:intergenic 40.0%
CCTCTACATCAAACACAAGT+TGG + chr4_1:23284641-23284660 Msa0540630:CDS 40.0%
!! ACTTTTTCTCATGTTCCCCC+GGG + chr4_1:23282106-23282125 Msa0540630:CDS 45.0%
TCCACAAGTTCCTCATCTGT+GGG - chr4_1:23282145-23282164 None:intergenic 45.0%
ATCCACAAGTTCCTCATCTG+TGG - chr4_1:23282146-23282165 None:intergenic 45.0%
GTCTCATGCCGGACAAAATA+TGG + chr4_1:23282501-23282520 Msa0540630:intron 45.0%
ACAAATAGAGCAACTGCAGC+TGG + chr4_1:23282910-23282929 Msa0540630:CDS 45.0%
!! GCTGGATTTTGGAAAGCAAC+AGG + chr4_1:23282928-23282947 Msa0540630:CDS 45.0%
TATAAAGGTCGAGCTCCCAA+TGG + chr4_1:23283012-23283031 Msa0540630:CDS 45.0%
AGATGAAAATGGCACACCAC+AGG + chr4_1:23283077-23283096 Msa0540630:CDS 45.0%
!! CACTTTTTAGGGGTTGGGTT+AGG - chr4_1:23283274-23283293 None:intergenic 45.0%
CATTCCAAACGTCCAACCTT+AGG - chr4_1:23283388-23283407 None:intergenic 45.0%
! TGGACGTTTGGAATGTGACT+TGG + chr4_1:23283393-23283412 Msa0540630:intron 45.0%
!! CGTTTGGAATGTGACTTGGT+TGG + chr4_1:23283397-23283416 Msa0540630:intron 45.0%
!! TTGGGCTAGTACTGGTAACA+TGG + chr4_1:23283416-23283435 Msa0540630:intron 45.0%
!! TGGGCTAGTACTGGTAACAT+GGG + chr4_1:23283417-23283436 Msa0540630:intron 45.0%
!! ATTAGTTTGTACGGGTCGAG+AGG + chr4_1:23283836-23283855 Msa0540630:intron 45.0%
GAAGTTCAAAGTTCGCTCGA+TGG - chr4_1:23283876-23283895 None:intergenic 45.0%
!! TATTTTCGACGGTTTGGAGC+AGG + chr4_1:23284015-23284034 Msa0540630:intron 45.0%
!! AGCTTTGGACTCTCTAGAAG+TGG - chr4_1:23284283-23284302 None:intergenic 45.0%
! CTTTTTCTCATGTTCCCCCG+GGG + chr4_1:23282107-23282126 Msa0540630:CDS 50.0%
TAGGTTCCATCCCACAGATG+AGG + chr4_1:23282132-23282151 Msa0540630:CDS 50.0%
CAAGTTCCTCATCTGTGGGA+TGG - chr4_1:23282141-23282160 None:intergenic 50.0%
TCCCACAGATGAGGAACTTG+TGG + chr4_1:23282141-23282160 Msa0540630:CDS 50.0%
! GAGCAACTGCAGCTGGATTT+TGG + chr4_1:23282917-23282936 Msa0540630:CDS 50.0%
! GTTGGGTTAGGCACAACTCA+TGG - chr4_1:23283262-23283281 None:intergenic 50.0%
!! TGACTTGGTTGGGCTAGTAC+TGG + chr4_1:23283408-23283427 Msa0540630:intron 50.0%
! TGGCTTGGACTACATGCTCT+AGG - chr4_1:23283703-23283722 None:intergenic 50.0%
! TTTGGAGCAGGAGGAAGGAT+GGG + chr4_1:23284027-23284046 Msa0540630:intron 50.0%
GTGAGCATGACTCTCCTTGT+TGG + chr4_1:23284101-23284120 Msa0540630:CDS 50.0%
TGGGATGGAACCTAAACCCC+GGG - chr4_1:23282126-23282145 None:intergenic 55.0%
GTGGGATGGAACCTAAACCC+CGG - chr4_1:23282127-23282146 None:intergenic 55.0%
GCGTGAGTGGTGTGTGTTGA+AGG - chr4_1:23283366-23283385 None:intergenic 55.0%
ACACACACCACTCACGCCTA+AGG + chr4_1:23283369-23283388 Msa0540630:intron 55.0%
ACACCACTCACGCCTAAGGT+TGG + chr4_1:23283373-23283392 Msa0540630:intron 55.0%
CACGCCTAAGGTTGGACGTT+TGG + chr4_1:23283381-23283400 Msa0540630:intron 55.0%
! TTTCGACGGTTTGGAGCAGG+AGG + chr4_1:23284018-23284037 Msa0540630:intron 55.0%
! GTTTGGAGCAGGAGGAAGGA+TGG + chr4_1:23284026-23284045 Msa0540630:intron 55.0%
CTCATGTTCCCCCGGGGTTT+AGG + chr4_1:23282113-23282132 Msa0540630:CDS 60.0%
GGATGGAACCTAAACCCCGG+GGG - chr4_1:23282124-23282143 None:intergenic 60.0%
GGGATGGAACCTAAACCCCG+GGG - chr4_1:23282125-23282144 None:intergenic 60.0%
CGTCCAACCTTAGGCGTGAG+TGG - chr4_1:23283379-23283398 None:intergenic 60.0%
! GACGGTTTGGAGCAGGAGGA+AGG + chr4_1:23284022-23284041 Msa0540630:intron 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 23282100 23284669 23282100 ID=Msa0540630;Name=Msa0540630
chr4_1 mRNA 23282100 23284669 23282100 ID=Msa0540630-mRNA-1;Parent=Msa0540630;Name=Msa0540630-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.5|0|1|1|1|3|0|354
chr4_1 exon 23282100 23282259 23282100 ID=Msa0540630-mRNA-1:exon:6417;Parent=Msa0540630-mRNA-1
chr4_1 exon 23282827 23283098 23282827 ID=Msa0540630-mRNA-1:exon:6418;Parent=Msa0540630-mRNA-1
chr4_1 exon 23284037 23284669 23284037 ID=Msa0540630-mRNA-1:exon:6419;Parent=Msa0540630-mRNA-1
chr4_1 CDS 23282100 23282259 23282100 ID=Msa0540630-mRNA-1:cds;Parent=Msa0540630-mRNA-1
chr4_1 CDS 23282827 23283098 23282827 ID=Msa0540630-mRNA-1:cds;Parent=Msa0540630-mRNA-1
chr4_1 CDS 23284037 23284669 23284037 ID=Msa0540630-mRNA-1:cds;Parent=Msa0540630-mRNA-1
Gene Sequence

>Msa0540630

ATGAATACTTTTTCTCATGTTCCCCCGGGGTTTAGGTTCCATCCCACAGATGAGGAACTTGTGGATTACTACCTTAGGAAGAAAATTGCTTCAAGAAGGATTGATCTTGATGTCATAAAAGATGTTGATCTTTACAAAATTGAACCATGGGATCTTGAAGAGATTTGCAGAATAGGAACAGAAGAACAAAATGAGTGGTATTTTTTTAGCCATAAAGATAAGAAGTATCCAACTGGGACAAGAACAAATAGAGCAACTGCAGCTGGATTTTGGAAAGCAACAGGAAGAGACAAATCAATCTATAGTAAACATAATTTGATAGGAATGAGGAAAACTTTGGTGTTTTATAAAGGTCGAGCTCCCAATGGACAAAAGTCAGATTGGATAATGCATGAGTATAGGCTTGAAACAGATGAAAATGGCACACCACAGGAGGAAGGATGGGTTGTATGTAGAGTATTCAAGAAGAGAGTAACAACAACAATTCGCAAAATGAGTGAGCATGACTCTCCTTGTTGGTATGAAGATCAAGTTTCATTCATGCAAGATATGGACTCACCAAACCAAACCTCTCAATCCAATTTGATATACCAACAATTACCATCTTATTCTTGCAAAAAGGAGCTAGATAATTTCCCATTCCAAAACATGTCTCGTGACAATTATCTTAATCTTCCACTTCTAGAGAGTCCAAAGCTTGTTCAATCTTCTTCAAACACAACCTCTAATCCAATGGTTACAACATATGACACTATAGATCATTCAAATTCTATGCTTCCTTCATCAATGCTCTTACAAGAAGAACAAGTCTTACACAGTGGTAATCAACAAAACTTTCATTCTATGTATGGAAACAATTCCAATGTTGAACAAGGTATGGTTGATGATCAAGTTACTGATTGGAGAGTTCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGAAGATGCATCTAAAGAGAATAATAACAACATCTTTCATGGCAATATTGAATTCAGAAATTTGGAAAAACAAGAAATGGTGCCTCATGAAAATGCCTCTACATCAAACACAAGTTGGATATGA
Protein sequence

>Msa0540630

MNTFSHVPPGFRFHPTDEELVDYYLRKKIASRRIDLDVIKDVDLYKIEPWDLEEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIYSKHNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTTIRKMSEHDSPCWYEDQVSFMQDMDSPNQTSQSNLIYQQLPSYSCKKELDNFPFQNMSRDNYLNLPLLESPKLVQSSSNTTSNPMVTTYDTIDHSNSMLPSSMLLQEEQVLHSGNQQNFHSMYGNNSNVEQGMVDDQVTDWRVLDKFVASQLSQEDASKENNNNIFHGNIEFRNLEKQEMVPHENASTSNTSWI*