AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0544300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0544300 MtrunA17_Chr4g0025051 81.911 586 78 3 1 577 1 567 0.0 878
Msa0544300 MtrunA17_Chr4g0025061 73.039 612 122 8 9 594 17 611 0.0 830
Msa0544300 MtrunA17_Chr4g0024391 73.265 490 110 3 124 594 1 488 0.0 686
Msa0544300 MtrunA17_Chr2g0322391 42.293 532 231 13 76 592 120 590 4.72e-103 324
Msa0544300 MtrunA17_Chr2g0288871 36.765 544 223 17 52 554 67 530 2.90e-77 255
Msa0544300 MtrunA17_Chr3g0099641 33.661 508 229 17 52 553 39 444 1.77e-67 226
Msa0544300 MtrunA17_Chr4g0075201 54.299 221 91 3 330 541 245 464 5.68e-63 215
Msa0544300 MtrunA17_Chr4g0024401 74.803 127 26 2 1 127 1 121 2.12e-54 181
Msa0544300 MtrunA17_Chr7g0270831 47.458 236 98 6 337 570 201 412 4.63e-53 187
Msa0544300 MtrunA17_Chr2g0302391 52.795 161 71 2 323 478 182 342 3.81e-46 168
Msa0544300 MtrunA17_Chr4g0051181 34.551 301 158 7 301 568 193 487 1.57e-34 137
Msa0544300 MtrunA17_Chr7g0216891 30.814 344 157 11 306 572 160 499 3.74e-34 137
Msa0544300 MtrunA17_Chr4g0060271 36.156 307 125 7 337 577 240 541 9.66e-28 118
Msa0544300 MtrunA17_Chr4g0001361 36.486 148 70 4 329 476 139 262 1.14e-23 102
Msa0544300 MtrunA17_Chr7g0218081 43.103 116 55 2 309 424 377 481 1.25e-23 104
Msa0544300 MtrunA17_Chr5g0418191 42.017 119 64 2 322 436 286 403 3.29e-23 102
Msa0544300 MtrunA17_Chr5g0418191 38.272 81 48 2 332 412 131 209 8.71e-11 64.3
Msa0544300 MtrunA17_Chr2g0333851 51.282 78 36 1 338 413 153 230 2.43e-22 98.2
Msa0544300 MtrunA17_Chr5g0419241 69.811 53 16 0 330 382 55 107 5.98e-22 91.3
Msa0544300 MtrunA17_Chr4g0042831 48.148 81 41 1 334 414 260 339 9.40e-22 97.8
Msa0544300 MtrunA17_Chr7g0224801 55.714 70 30 1 342 411 83 151 9.92e-22 92.8
Msa0544300 MtrunA17_Chr1g0150271 54.545 66 30 0 347 412 96 161 1.03e-21 95.1
Msa0544300 MtrunA17_Chr3g0101131 41.284 109 60 2 325 430 388 495 1.47e-21 99.0
Msa0544300 MtrunA17_Chr3g0079691 53.750 80 36 1 335 414 478 556 1.71e-21 99.0
Msa0544300 MtrunA17_Chr5g0432161 45.217 115 56 3 305 414 370 482 1.86e-21 98.6
Msa0544300 MtrunA17_Chr4g0004911 53.165 79 36 1 334 412 318 395 2.61e-21 97.4
Msa0544300 MtrunA17_Chr4g0004911 40.698 86 44 3 336 419 170 250 1.41e-11 67.0
Msa0544300 MtrunA17_Chr7g0243891 54.321 81 36 1 334 414 356 435 3.22e-21 97.4
Msa0544300 MtrunA17_Chr4g0051881 44.554 101 54 2 339 439 165 263 3.24e-21 95.1
Msa0544300 MtrunA17_Chr5g0445311 52.500 80 37 1 335 414 347 425 3.81e-21 97.4
Msa0544300 MtrunA17_Chr3g0136961 50.667 75 37 0 335 409 121 195 1.08e-20 92.8
Msa0544300 MtrunA17_Chr3g0106491 43.564 101 56 1 313 413 326 425 1.54e-20 95.1
Msa0544300 MtrunA17_Chr3g0106491 39.506 81 43 3 336 416 186 260 8.56e-11 64.7
Msa0544300 MtrunA17_Chr2g0294231 48.718 78 39 1 339 416 190 266 1.63e-20 94.0
Msa0544300 MtrunA17_Chr7g0270191 43.617 94 48 2 337 430 130 218 1.77e-20 92.4
Msa0544300 MtrunA17_Chr7g0249311 44.762 105 55 2 312 414 350 453 2.77e-20 95.1
Msa0544300 MtrunA17_Chr7g0249311 27.434 226 104 10 196 416 71 241 1.28e-11 67.8
Msa0544300 MtrunA17_Chr7g0270051 40.000 110 61 2 331 438 30 136 2.87e-20 90.9
Msa0544300 MtrunA17_Chr7g0249301 51.316 76 36 1 339 414 279 353 5.29e-20 92.4
Msa0544300 MtrunA17_Chr1g0194481 47.436 78 40 1 339 416 145 221 7.55e-20 90.9
Msa0544300 MtrunA17_Chr1g0150281 43.478 92 52 0 337 428 125 216 1.66e-19 89.4
Msa0544300 MtrunA17_Chr4g0068541 48.684 76 38 1 338 413 194 268 3.39e-19 90.5
Msa0544300 MtrunA17_Chr1g0150801 51.351 74 35 1 337 410 87 159 7.83e-19 84.0
Msa0544300 MtrunA17_Chr3g0129321 50.667 75 36 1 339 413 105 178 1.01e-18 85.1
Msa0544300 MtrunA17_Chr8g0386241 38.235 102 62 1 315 416 66 166 1.06e-18 84.3
Msa0544300 MtrunA17_Chr7g0248721 48.750 80 39 2 331 410 120 197 1.40e-18 84.7
Msa0544300 MtrunA17_Chr2g0293481 46.667 75 40 0 348 422 263 337 1.73e-18 88.6
Msa0544300 MtrunA17_Chr5g0443131 46.154 78 41 1 339 416 144 220 1.85e-18 86.7
Msa0544300 MtrunA17_Chr5g0447701 42.391 92 52 1 323 414 223 313 3.68e-18 87.0
Msa0544300 MtrunA17_Chr7g0263531 43.210 81 45 1 332 412 341 420 5.84e-18 86.7
Msa0544300 MtrunA17_Chr7g0263531 42.254 71 39 2 353 423 190 258 7.55e-11 64.7
Msa0544300 MtrunA17_Chr8g0379461 50.794 63 31 0 352 414 76 138 1.33e-17 82.8
Msa0544300 MtrunA17_Chr5g0418781 46.154 78 41 1 332 409 104 180 1.64e-17 83.2
Msa0544300 MtrunA17_Chr8g0383251 46.753 77 40 1 339 415 95 170 2.55e-17 80.5
Msa0544300 MtrunA17_Chr8g0387501 45.833 72 39 0 351 422 128 199 2.72e-17 82.4
Msa0544300 MtrunA17_Chr1g0147881 47.059 85 43 1 337 419 245 329 3.55e-17 83.2
Msa0544300 MtrunA17_Chr7g0248691 46.667 75 40 0 348 422 150 224 3.59e-17 83.2
Msa0544300 MtrunA17_Chr8g0348311 46.667 75 40 0 348 422 151 225 5.21e-17 82.8
Msa0544300 MtrunA17_Chr1g0202461 45.055 91 48 1 352 442 261 349 9.11e-17 82.8
Msa0544300 MtrunA17_Chr2g0319961 43.038 79 45 0 343 421 71 149 9.88e-17 80.5
Msa0544300 MtrunA17_Chr4g0053281 52.308 65 31 0 350 414 264 328 1.39e-16 81.3
Msa0544300 MtrunA17_Chr8g0335811 45.570 79 42 1 331 409 133 210 2.24e-16 78.6
Msa0544300 MtrunA17_Chr2g0289181 30.714 140 87 2 347 476 9 148 2.39e-16 79.0
Msa0544300 MtrunA17_Chr2g0284321 48.438 64 33 0 349 412 32 95 2.94e-16 78.2
Msa0544300 MtrunA17_Chr5g0401821 51.613 62 30 0 350 411 197 258 1.25e-15 77.4
Msa0544300 MtrunA17_Chr1g0188941 46.970 66 34 1 347 412 46 110 1.63e-15 73.2
Msa0544300 MtrunA17_Chr3g0129361 40.217 92 53 2 339 430 131 220 2.60e-15 75.5
Msa0544300 MtrunA17_Chr4g0074001 45.000 80 43 1 337 416 344 422 2.94e-15 79.0
Msa0544300 MtrunA17_Chr1g0184691 51.667 60 29 0 350 409 291 350 3.97e-15 77.4
Msa0544300 MtrunA17_Chr6g0485431 45.000 80 42 2 339 417 141 219 2.95e-14 74.7
Msa0544300 MtrunA17_Chr8g0383351 51.667 60 28 1 350 409 158 216 3.32e-14 72.4
Msa0544300 MtrunA17_Chr4g0071521 48.333 60 31 0 350 409 243 302 4.98e-14 73.6
Msa0544300 MtrunA17_Chr1g0189391 47.222 72 36 2 339 409 84 154 1.11e-13 72.8
Msa0544300 MtrunA17_Chr7g0228941 43.333 60 34 0 350 409 50 109 1.03e-12 65.5
Msa0544300 MtrunA17_Chr7g0244981 33.333 132 66 3 298 407 48 179 1.85e-12 68.2
Msa0544300 MtrunA17_Chr7g0238921 52.632 57 26 1 353 409 125 180 4.56e-12 67.4
Msa0544300 MtrunA17_Chr3g0139021 41.667 60 35 0 350 409 312 371 3.89e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0544300 AT4G04450.1 41.127 479 215 12 89 553 78 503 7.68e-87 280
Msa0544300 AT4G04450.2 40.909 462 206 12 106 553 1 409 2.89e-82 265
Msa0544300 AT1G62300.1 49.630 270 105 7 329 573 289 552 7.19e-62 214
Msa0544300 AT4G22070.4 70.946 148 42 1 331 477 276 423 9.65e-57 200
Msa0544300 AT4G22070.4 36.441 118 74 1 89 205 76 193 5.67e-13 72.0
Msa0544300 AT4G22070.3 70.946 148 42 1 331 477 276 423 9.65e-57 200
Msa0544300 AT4G22070.3 36.441 118 74 1 89 205 76 193 5.67e-13 72.0
Msa0544300 AT4G22070.2 70.946 148 42 1 331 477 276 423 9.65e-57 200
Msa0544300 AT4G22070.2 36.441 118 74 1 89 205 76 193 5.67e-13 72.0
Msa0544300 AT4G22070.1 70.946 148 42 1 331 477 276 423 9.65e-57 200
Msa0544300 AT4G22070.1 36.441 118 74 1 89 205 76 193 5.67e-13 72.0
Msa0544300 AT4G01720.1 40.273 293 128 7 286 550 170 443 5.48e-43 161
Msa0544300 AT1G68150.1 47.368 152 66 2 296 433 165 316 3.39e-38 145
Msa0544300 AT1G69810.2 46.386 166 82 4 323 487 116 275 5.83e-36 137
Msa0544300 AT1G69810.1 46.386 166 82 4 323 487 174 333 8.30e-36 139
Msa0544300 AT1G18860.1 45.109 184 89 3 335 511 222 400 4.40e-34 136
Msa0544300 AT5G15130.1 32.685 257 130 8 337 554 212 464 2.83e-29 122
Msa0544300 AT1G13960.2 51.899 79 37 1 334 412 238 315 1.15e-22 100
Msa0544300 AT1G13960.2 34.483 116 63 4 306 416 31 138 3.15e-11 65.9
Msa0544300 AT1G80840.1 48.718 78 38 1 338 413 130 207 1.60e-22 99.0
Msa0544300 AT1G13960.1 51.899 79 37 1 334 412 391 468 1.84e-22 101
Msa0544300 AT1G13960.1 34.483 116 63 4 306 416 184 291 2.01e-11 67.0
Msa0544300 AT2G03340.1 48.276 87 44 1 328 414 391 476 5.14e-22 100
Msa0544300 AT2G03340.1 50.000 60 28 2 353 412 251 308 1.87e-11 67.4
Msa0544300 AT2G25000.3 32.086 187 106 4 245 415 7 188 1.35e-21 94.7
Msa0544300 AT1G29860.1 44.681 94 46 2 337 430 121 208 1.37e-21 95.5
Msa0544300 AT2G25000.2 44.944 89 49 0 327 415 78 166 1.48e-21 94.4
Msa0544300 AT2G25000.4 44.944 89 49 0 327 415 78 166 1.48e-21 94.4
Msa0544300 AT2G25000.1 29.902 204 130 4 217 415 14 209 1.56e-21 95.1
Msa0544300 AT5G41570.1 44.444 99 50 2 339 437 85 178 2.11e-21 92.4
Msa0544300 AT1G64000.1 44.231 104 53 2 334 437 96 194 2.25e-21 92.8
Msa0544300 AT5G13080.1 54.795 73 32 1 339 411 54 125 2.30e-21 91.3
Msa0544300 AT4G18170.1 39.316 117 60 2 339 445 159 274 9.54e-21 94.0
Msa0544300 AT5G56270.1 52.500 80 37 1 335 414 470 548 1.03e-20 97.1
Msa0544300 AT5G46350.1 41.346 104 60 1 339 442 170 272 1.49e-20 93.6
Msa0544300 AT2G38470.1 50.617 81 39 1 334 414 344 423 1.84e-20 95.5
Msa0544300 AT4G31800.2 46.154 91 44 1 331 416 85 175 2.45e-20 91.3
Msa0544300 AT3G01080.2 45.349 86 46 1 327 412 319 403 2.63e-20 94.7
Msa0544300 AT3G01080.1 45.349 86 46 1 327 412 281 365 3.08e-20 94.0
Msa0544300 AT4G31800.1 54.545 66 30 0 351 416 175 240 3.48e-20 92.0
Msa0544300 AT4G26640.5 48.750 80 40 1 335 414 188 266 4.25e-20 93.2
Msa0544300 AT4G26640.6 48.750 80 40 1 335 414 188 266 4.25e-20 93.2
Msa0544300 AT4G26640.4 48.750 80 40 1 335 414 188 266 4.25e-20 93.2
Msa0544300 AT4G26640.3 48.750 80 40 1 335 414 188 266 4.25e-20 93.2
Msa0544300 AT2G30250.1 43.158 95 52 2 322 416 299 391 5.67e-20 92.8
Msa0544300 AT5G26170.1 51.389 72 34 1 338 409 99 169 7.13e-20 87.8
Msa0544300 AT3G01970.1 54.167 72 32 1 338 409 51 121 8.68e-20 86.7
Msa0544300 AT4G26640.7 48.750 80 40 1 335 414 324 402 8.69e-20 93.6
Msa0544300 AT4G26640.1 48.750 80 40 1 335 414 292 370 9.20e-20 93.2
Msa0544300 AT4G26640.2 48.750 80 40 1 335 414 364 442 1.12e-19 93.2
Msa0544300 AT5G49520.1 45.000 80 43 1 337 416 206 284 1.26e-19 92.0
Msa0544300 AT2G04880.2 41.758 91 52 1 322 412 253 342 1.63e-19 92.0
Msa0544300 AT2G04880.2 35.385 130 78 4 348 476 107 231 4.54e-13 72.0
Msa0544300 AT2G04880.1 41.758 91 52 1 322 412 277 366 1.99e-19 92.0
Msa0544300 AT2G04880.1 48.529 68 33 2 348 415 107 172 6.70e-13 71.6
Msa0544300 AT5G07100.2 48.148 81 41 1 332 412 121 200 3.63e-19 87.0
Msa0544300 AT5G07100.4 48.148 81 41 1 332 412 121 200 3.63e-19 87.0
Msa0544300 AT5G07100.5 48.148 81 41 1 332 412 121 200 3.63e-19 87.0
Msa0544300 AT5G07100.3 48.148 81 41 1 332 412 121 200 3.63e-19 87.0
Msa0544300 AT5G64810.1 49.462 93 43 2 320 409 75 166 3.70e-19 86.3
Msa0544300 AT2G46130.1 50.000 72 35 1 339 410 17 87 5.64e-19 83.2
Msa0544300 AT5G07100.1 45.882 85 45 1 332 416 214 297 6.58e-19 88.2
Msa0544300 AT2G47260.1 45.783 83 44 1 337 419 159 240 1.20e-18 88.2
Msa0544300 AT5G52830.1 46.341 82 44 0 341 422 154 235 3.32e-18 87.0
Msa0544300 AT1G30650.1 48.649 74 38 0 346 419 211 284 4.03e-18 87.4
Msa0544300 AT1G69310.4 46.667 75 39 1 335 409 130 203 6.76e-18 84.7
Msa0544300 AT1G69310.2 46.667 75 39 1 335 409 130 203 6.76e-18 84.7
Msa0544300 AT1G69310.1 46.667 75 39 1 335 409 130 203 6.76e-18 84.7
Msa0544300 AT2G30590.1 55.224 67 29 1 350 415 311 377 7.45e-18 86.3
Msa0544300 AT3G62340.1 51.351 74 35 1 339 412 105 177 7.87e-18 84.3
Msa0544300 AT2G34830.1 47.297 74 39 0 346 419 209 282 9.82e-18 86.3
Msa0544300 AT2G34830.2 47.297 74 39 0 346 419 218 291 1.18e-17 86.3
Msa0544300 AT1G29280.1 47.143 70 37 0 343 412 65 134 1.52e-17 83.2
Msa0544300 AT3G58710.1 45.205 73 40 0 343 415 62 134 1.63e-17 83.6
Msa0544300 AT3G58710.2 45.205 73 40 0 343 415 61 133 1.68e-17 83.6
Msa0544300 AT4G26440.1 37.600 125 73 2 339 463 359 478 2.31e-17 85.9
Msa0544300 AT4G30935.1 35.556 135 85 2 309 442 288 421 3.40e-17 85.1
Msa0544300 AT4G01250.1 46.667 75 40 0 348 422 124 198 3.48e-17 83.2
Msa0544300 AT2G23320.1 55.932 59 26 0 353 411 241 299 7.20e-17 82.4
Msa0544300 AT4G23550.1 44.737 76 42 0 347 422 135 210 2.04e-16 80.9
Msa0544300 AT1G55600.1 46.053 76 40 1 339 414 294 368 3.39e-16 82.0
Msa0544300 AT2G44745.1 43.038 79 44 1 331 409 124 201 5.26e-16 77.8
Msa0544300 AT4G24240.1 53.226 62 29 0 350 411 279 340 6.04e-16 80.1
Msa0544300 AT5G28650.1 53.333 60 28 0 350 409 260 319 8.05e-16 79.3
Msa0544300 AT3G04670.1 53.333 60 28 0 350 409 260 319 1.82e-15 78.6
Msa0544300 AT4G39410.1 47.887 71 36 1 339 409 210 279 3.81e-15 77.0
Msa0544300 AT5G45050.4 47.059 68 36 0 352 419 1041 1108 4.73e-15 79.3
Msa0544300 AT5G45050.2 47.059 68 36 0 352 419 1152 1219 4.74e-15 79.3
Msa0544300 AT5G45050.1 47.059 68 36 0 352 419 1180 1247 4.81e-15 79.3
Msa0544300 AT4G31550.1 53.333 60 28 0 350 409 244 303 5.07e-15 77.0
Msa0544300 AT4G31550.2 53.333 60 28 0 350 409 243 302 5.11e-15 77.0
Msa0544300 AT2G46130.2 47.222 72 33 2 339 410 17 83 1.08e-14 70.9
Msa0544300 AT2G24570.1 51.667 60 29 0 350 409 241 300 2.45e-14 74.7
Msa0544300 AT2G37260.2 40.000 100 53 2 312 411 233 325 2.68e-14 75.1
Msa0544300 AT2G37260.3 40.000 100 53 2 312 411 235 327 2.81e-14 75.1
Msa0544300 AT2G37260.1 50.769 65 31 1 347 411 344 407 4.85e-14 75.1
Msa0544300 AT2G21900.1 32.143 112 70 2 304 415 66 171 5.04e-14 71.6
Msa0544300 AT5G45260.1 39.785 93 50 2 336 426 1196 1284 9.42e-12 68.9

Find 111 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAAAATTGCAGGAAAATT+TGG 0.122453 4_1:+32518452 None:intergenic
CCTAACTGATCTTTACTTAT+AGG 0.125256 4_1:+32519931 None:intergenic
AATAGAGTTTGATTTCTTTA+AGG 0.143956 4_1:-32523102 Msa0544300:CDS
GAAGTTTATGATGGAAAATT+TGG 0.188184 4_1:-32520180 Msa0544300:CDS
GTTCTCTTGTCTTCTGAATT+AGG 0.194946 4_1:+32522754 None:intergenic
TTGACTGCCCGAGCAATATT+TGG 0.235969 4_1:+32518494 None:intergenic
GCAGAAGTCTGACGGTTTAA+AGG 0.243460 4_1:+32518599 None:intergenic
AACTCAAGGTTAATATTAAC+TGG 0.250989 4_1:+32523239 None:intergenic
TCCCTTTCCTAGTTAATATT+AGG 0.292067 4_1:-32523172 Msa0544300:CDS
CGATAATACGCTTTAGGAAA+TGG 0.298424 4_1:+32519618 None:intergenic
AATAAGGTTATGGAAGTTAA+AGG 0.322766 4_1:-32520207 Msa0544300:CDS
ACTGGTGCCAAGGAAAATTA+TGG 0.327217 4_1:-32520247 Msa0544300:CDS
TCAAGTGTAATGGTTGGAAA+TGG 0.343703 4_1:+32518674 None:intergenic
AAAGGAGTTTGAAACTGATC+TGG 0.348918 4_1:+32518617 None:intergenic
CTGCAACGATAATACGCTTT+AGG 0.349365 4_1:+32519612 None:intergenic
CTTGTTTCATTAGATGAGAT+TGG 0.354120 4_1:+32523125 None:intergenic
AACTGATCTGGGTTCCTTTG+TGG 0.354361 4_1:+32518629 None:intergenic
TTGTGTCCCTTCAAAACTAT+TGG 0.363975 4_1:-32518522 Msa0544300:CDS
AAAAGGAAATTTGTTGATGC+TGG 0.369100 4_1:-32520120 Msa0544300:CDS
CTACTAGTATTGGTAGTAAC+AGG 0.370957 4_1:+32522808 None:intergenic
GATGCAAGATTGTAAGGTTA+AGG 0.371759 4_1:-32520337 Msa0544300:CDS
GCCATTTCTTTGGCTGCTGC+AGG 0.373631 4_1:+32518833 None:intergenic
TCTTGGATCAGCTACTAATA+AGG 0.377634 4_1:-32520223 Msa0544300:CDS
TAGTGATACATCATCTTTGT+TGG 0.382295 4_1:-32523018 Msa0544300:CDS
TGCTGGGTTGGCTACTAATA+AGG 0.384058 4_1:-32520103 Msa0544300:CDS
CCAAGGAAAATTATGGATCT+TGG 0.393916 4_1:-32520240 Msa0544300:CDS
TCTTTGGCTGCTGCAGGTAA+AGG 0.394516 4_1:+32518839 None:intergenic
AAGGTCAAAGAAGTGTTTAA+TGG 0.396617 4_1:-32520084 Msa0544300:CDS
TAACATCCTCATTCTTACTT+AGG 0.406214 4_1:+32519866 None:intergenic
TTTCAGATGGCTATTCTTCA+AGG 0.408471 4_1:-32520459 Msa0544300:intron
GGATGTCAATGGAGAAAGTA+TGG 0.409848 4_1:-32519663 Msa0544300:CDS
CAAGTGTAATGGTTGGAAAT+GGG 0.411437 4_1:+32518675 None:intergenic
AAGCTTCGAGGAGGCTTTGA+AGG 0.419669 4_1:-32519896 Msa0544300:CDS
CTTTGGCTGCTGCAGGTAAA+GGG 0.420375 4_1:+32518840 None:intergenic
ATCAGCTACTAATAAGGTTA+TGG 0.421535 4_1:-32520217 Msa0544300:CDS
GATAATACGCTTTAGGAAAT+GGG 0.422168 4_1:+32519619 None:intergenic
TAGATGAGATTGGAGAGGTT+TGG 0.425712 4_1:+32523135 None:intergenic
GCTACTCTTACTTCCATGAT+TGG 0.436300 4_1:-32518428 Msa0544300:CDS
AGAGTAGCTGATAAAATTGC+AGG 0.438645 4_1:+32518443 None:intergenic
CTATGAATATGATCCTTGTC+GGG 0.440174 4_1:+32523038 None:intergenic
GGGTTCCTTTGTGGAGTAGT+TGG 0.444283 4_1:+32518638 None:intergenic
CAGAAGACAAGAGAACTAAG+AGG 0.448055 4_1:-32522747 Msa0544300:CDS
GAAAGTGATGCAAGATTGTA+AGG 0.455429 4_1:-32520343 Msa0544300:CDS
GTAGCAGCAGTAGTGTTGTT+TGG 0.455433 4_1:+32518395 None:intergenic
ACCTGCAGCAGCCAAAGAAA+TGG 0.461509 4_1:-32518834 Msa0544300:CDS
CCTATAAGTAAAGATCAGTT+AGG 0.468887 4_1:-32519931 Msa0544300:CDS
AGTTGGTGCAAAGGCAATGT+AGG 0.470135 4_1:-32520023 Msa0544300:CDS
ACATCAACAACAAGCAATGA+TGG 0.474277 4_1:-32518773 Msa0544300:CDS
ACAGGTAGCAACAACAAAGA+TGG 0.479242 4_1:-32518314 Msa0544300:CDS
AAAGGACAAGAAGTTTATGA+TGG 0.480807 4_1:-32520189 Msa0544300:CDS
GACCTAATATTAACTAGGAA+AGG 0.482637 4_1:+32523170 None:intergenic
ACTATGAATATGATCCTTGT+CGG 0.485934 4_1:+32523037 None:intergenic
TGGTTGCTCAGTCCGAAAAC+AGG 0.487721 4_1:-32519580 Msa0544300:intron
AATGGGAACAATGTCGCAAA+AGG 0.491408 4_1:-32518356 Msa0544300:CDS
GGCAGTTCCAAATATTGCTC+GGG 0.494464 4_1:-32518501 Msa0544300:CDS
AGCTGAGAATGGTGGAGTAC+TGG 0.504825 4_1:-32520265 Msa0544300:CDS
CTCTGCCTCTGTCCCCGACA+AGG 0.510437 4_1:-32523051 Msa0544300:CDS
TGGCAGTTCCAAATATTGCT+CGG 0.513777 4_1:-32518502 Msa0544300:CDS
AAGGAGTTTGAAACTGATCT+GGG 0.518182 4_1:+32518618 None:intergenic
TAGTAGTGATCAATCTATGA+TGG 0.520634 4_1:-32522791 Msa0544300:CDS
TGGCTGAGTATCACCAATCA+TGG 0.521571 4_1:+32518415 None:intergenic
ATTAACTGGATTTGAATCCA+TGG 0.524287 4_1:+32523253 None:intergenic
TGGGACTAAGTTTCAACTCA+AGG 0.529586 4_1:+32523225 None:intergenic
ACCTAATATTAACTAGGAAA+GGG 0.529628 4_1:+32523171 None:intergenic
ATGGTGGAGAATTAGTGAAA+AGG 0.530673 4_1:-32520137 Msa0544300:CDS
GAAATTTGTTGATGCTGGGT+TGG 0.532637 4_1:-32520115 Msa0544300:CDS
AGGAATTTGCAGAAGTCTGA+CGG 0.535434 4_1:+32518591 None:intergenic
GTTGTCATCACAACATATGA+AGG 0.537947 4_1:-32518875 Msa0544300:CDS
AGTATTGGTAGTAACAGGAT+TGG 0.539477 4_1:+32522813 None:intergenic
AGGCAGAGACAACTTCTTGA+TGG 0.540615 4_1:+32523066 None:intergenic
TTGAGTATAATCAAGTGTAA+TGG 0.545850 4_1:+32518664 None:intergenic
AAAGGAAATTTGTTGATGCT+GGG 0.547546 4_1:-32520119 Msa0544300:CDS
AGATTGATCACTACTAGTAT+TGG 0.549551 4_1:+32522798 None:intergenic
AGATTACAATTACATGCGAA+TGG 0.550976 4_1:-32520373 Msa0544300:CDS
TGTAAGGTTAAGGAAGTCAA+AGG 0.554949 4_1:-32520327 Msa0544300:CDS
TGGAGGACCTAATATTAACT+AGG 0.555671 4_1:+32523165 None:intergenic
GTTAGTCCTAAGTAAGAATG+AGG 0.558419 4_1:-32519872 Msa0544300:CDS
GTATTGGTAGTAACAGGATT+GGG 0.564404 4_1:+32522814 None:intergenic
TTATTGTGTTAGATCACTGA+TGG 0.564668 4_1:-32519684 Msa0544300:intron
AATTGAGAATGATGGAGAGT+TGG 0.565162 4_1:-32520040 Msa0544300:CDS
ATGATCCTTGTCGGGGACAG+AGG 0.567680 4_1:+32523046 None:intergenic
AAAATTTGGATTAGCAGCAA+TGG 0.568779 4_1:+32518466 None:intergenic
ACTTAGTCCCAACGAAAACA+TGG 0.569432 4_1:-32523213 Msa0544300:CDS
GTCGCAAAAGGTAATAACAA+TGG 0.570392 4_1:-32518344 Msa0544300:CDS
TTGAGAGATCAGAGAAGCTG+AGG 0.571353 4_1:+32518571 None:intergenic
GTATAATCAAGTGTAATGGT+TGG 0.576480 4_1:+32518668 None:intergenic
AATAACAATGGAAATATCAC+AGG 0.579865 4_1:-32518332 Msa0544300:CDS
CAGGTAGCAACAACAAAGAT+GGG 0.581390 4_1:-32518313 Msa0544300:CDS
GTTGGTGCAAAGGCAATGTA+GGG 0.584702 4_1:-32520022 Msa0544300:CDS
TACTAATGCTGAGACTGTGA+TGG 0.589292 4_1:-32519986 Msa0544300:CDS
CAATACTTGAAGAACAAGGA+AGG 0.589537 4_1:+32518717 None:intergenic
AAGTGTAATGGTTGGAAATG+GGG 0.590397 4_1:+32518676 None:intergenic
ATGATGGAGAGTTGGTGCAA+AGG 0.595504 4_1:-32520032 Msa0544300:CDS
TTCAAACTTAACAGGTACAA+AGG 0.596299 4_1:-32518916 Msa0544300:intron
AGAAGACAAGAGAACTAAGA+GGG 0.598740 4_1:-32522746 Msa0544300:CDS
ATCAGCGTTGAAAAGCTTCG+AGG 0.603132 4_1:-32519908 Msa0544300:CDS
AATACTTGAAGAACAAGGAA+GGG 0.605302 4_1:+32518718 None:intergenic
TAGCAACAACAAAGATGGGA+AGG 0.605972 4_1:-32518309 Msa0544300:CDS
ATGGTGGAGTACTGGTGCCA+AGG 0.608936 4_1:-32520257 Msa0544300:CDS
TATCGTTGCAGCATGGCCCG+TGG 0.614367 4_1:-32519600 Msa0544300:CDS
TTCATTAGATGAGATTGGAG+AGG 0.619862 4_1:+32523130 None:intergenic
AGATCACTGATGGATGTCAA+TGG 0.621939 4_1:-32519674 Msa0544300:CDS
ATACTTGAAGAACAAGGAAG+GGG 0.623529 4_1:+32518719 None:intergenic
TGGCTGCTGCAGGTAAAGGG+TGG 0.624702 4_1:+32518843 None:intergenic
AGCGTATTATCGTTGCAGCA+TGG 0.651842 4_1:-32519607 Msa0544300:CDS
TGTTAATGTTGAAAATGTTG+AGG 0.658284 4_1:-32519848 Msa0544300:CDS
AGACAAGAGAACTAAGAGGG+AGG 0.677564 4_1:-32522743 Msa0544300:intron
AATCTCCAACTACTCCACAA+AGG 0.678231 4_1:-32518643 Msa0544300:CDS
TATGAATATGATCCTTGTCG+GGG 0.678269 4_1:+32523039 None:intergenic
AGCGTTGAAAAGCTTCGAGG+AGG 0.678382 4_1:-32519905 Msa0544300:CDS
GTTGCAATACTTGAAGAACA+AGG 0.694121 4_1:+32518713 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAGTTGAAAAAATTAAAA+TGG + chr4_1:32519040-32519059 None:intergenic 10.0%
!! TGAATAAATAAATTCAATTT+AGG + chr4_1:32519510-32519529 None:intergenic 10.0%
!! ACTGATAATAATAATAATAA+TGG - chr4_1:32523181-32523200 Msa0544300:CDS 10.0%
!! CTGATAATAATAATAATAAT+GGG - chr4_1:32523182-32523201 Msa0544300:CDS 10.0%
!!! ATATATATAATTTTCTTGGT+TGG - chr4_1:32519099-32519118 Msa0544300:intron 15.0%
!! TGTACTATACTTATAAATAT+AGG + chr4_1:32519161-32519180 None:intergenic 15.0%
!! TTATCTATGGTTAAAATAAA+GGG + chr4_1:32519224-32519243 None:intergenic 15.0%
!! ATTATCTATGGTTAAAATAA+AGG + chr4_1:32519225-32519244 None:intergenic 15.0%
!! GAAAACATAATTATTATCTA+TGG + chr4_1:32519237-32519256 None:intergenic 15.0%
!!! ATTTTTTTCTCTCTTTTATT+TGG - chr4_1:32519446-32519465 Msa0544300:intron 15.0%
!!! CACTTAACAAATTTTTTTAA+CGG - chr4_1:32520560-32520579 Msa0544300:intron 15.0%
!!! TAGAATATTTTTATGTGATT+TGG - chr4_1:32520840-32520859 Msa0544300:intron 15.0%
!! AATAATCGAATTCAATTTAA+TGG - chr4_1:32520979-32520998 Msa0544300:intron 15.0%
!! AAATATCATCACATAAAAAA+TGG + chr4_1:32521060-32521079 None:intergenic 15.0%
!!! ATGCATATTTAAGTTTTTAA+TGG + chr4_1:32522446-32522465 None:intergenic 15.0%
!!! AATAGAGTTTGATTTCTTTA+AGG - chr4_1:32518453-32518472 Msa0544300:CDS 20.0%
!! AATACGTAGAAAAAAACAAT+GGG + chr4_1:32518599-32518618 None:intergenic 20.0%
!! TAATACGTAGAAAAAAACAA+TGG + chr4_1:32518600-32518619 None:intergenic 20.0%
!!! TTATGATCATCTTGATAATT+TGG - chr4_1:32518686-32518705 Msa0544300:CDS 20.0%
!!! ATTTTTTTCCTTCCATTTAT+TGG - chr4_1:32518884-32518903 Msa0544300:CDS 20.0%
!! AAAAATTAAAATGGAAGTGA+GGG + chr4_1:32519031-32519050 None:intergenic 20.0%
!! AAAAAATTAAAATGGAAGTG+AGG + chr4_1:32519032-32519051 None:intergenic 20.0%
!! TATCTATGGTTAAAATAAAG+GGG + chr4_1:32519223-32519242 None:intergenic 20.0%
!!! CACTTAACAGATTTTTTTAA+CGG + chr4_1:32519661-32519680 None:intergenic 20.0%
!! AATATCATCAATTTACTGTT+AGG - chr4_1:32519844-32519863 Msa0544300:CDS 20.0%
!! TGCTTATAATTTAGCAATTT+CGG + chr4_1:32520037-32520056 None:intergenic 20.0%
!! ATGACTTAATAGTTATGTTA+TGG - chr4_1:32520169-32520188 Msa0544300:CDS 20.0%
!!! AAACATTTGTTATCAAACTA+TGG - chr4_1:32520192-32520211 Msa0544300:CDS 20.0%
!! ACTAAAGTGAAAGTAAAATA+TGG + chr4_1:32520499-32520518 None:intergenic 20.0%
!! ATATTTGTTTCACAAATAAG+AGG + chr4_1:32520868-32520887 None:intergenic 20.0%
!! TAGTTAAAATACTAATGAAG+TGG - chr4_1:32522583-32522602 Msa0544300:intron 20.0%
! AACTCAAGGTTAATATTAAC+TGG + chr4_1:32518319-32518338 None:intergenic 25.0%
! ACCTAATATTAACTAGGAAA+GGG + chr4_1:32518387-32518406 None:intergenic 25.0%
! AACAATGGGATATTGAATTA+TGG + chr4_1:32518585-32518604 None:intergenic 25.0%
!!! TATTTTTTTCTTCAACAGCT+TGG - chr4_1:32518717-32518736 Msa0544300:CDS 25.0%
! TAAGTTCATTAAATTCAGCT+AGG + chr4_1:32518852-32518871 None:intergenic 25.0%
!!! ATTTTGATCCAATAAATGGA+AGG + chr4_1:32518895-32518914 None:intergenic 25.0%
!!! CTCAATTTTGATCCAATAAA+TGG + chr4_1:32518899-32518918 None:intergenic 25.0%
!!! TATAATTTTCTTGGTTGGTT+TGG - chr4_1:32519104-32519123 Msa0544300:intron 25.0%
! CTAAAGTGAAAGGAAAAAAA+TGG - chr4_1:32519723-32519742 Msa0544300:intron 25.0%
!! AAGGAAAAAAATGGTCATTT+TGG - chr4_1:32519732-32519751 Msa0544300:intron 25.0%
!!! TGATATTGATTTTCGATTCA+GGG + chr4_1:32519831-32519850 None:intergenic 25.0%
!!! ATGATATTGATTTTCGATTC+AGG + chr4_1:32519832-32519851 None:intergenic 25.0%
! TAATTTCGTGTTTACTATCA+GGG + chr4_1:32519903-32519922 None:intergenic 25.0%
! TGATAGTAAACACGAAATTA+GGG - chr4_1:32519903-32519922 Msa0544300:CDS 25.0%
! ACTAAAAAACATCACATAGT+TGG + chr4_1:32520003-32520022 None:intergenic 25.0%
! CTAAATTATAAGCACAATTG+TGG - chr4_1:32520043-32520062 Msa0544300:CDS 25.0%
! TTGAATTATATGCCCAAATA+TGG - chr4_1:32520113-32520132 Msa0544300:CDS 25.0%
! TAAAAGTTTGCACCATATTT+GGG + chr4_1:32520128-32520147 None:intergenic 25.0%
! TTAAAAGTTTGCACCATATT+TGG + chr4_1:32520129-32520148 None:intergenic 25.0%
!!! GCAAACTTTTAATTACTCTA+TGG - chr4_1:32520137-32520156 Msa0544300:CDS 25.0%
! AAATTTCGTGTTTAATGTCA+GGG - chr4_1:32520319-32520338 Msa0544300:CDS 25.0%
! AATATCCTCAATTTACTGTT+AGG + chr4_1:32519772-32519791 None:intergenic 25.0%
! AAAGTAAAATATGGTCACTT+TGG + chr4_1:32520490-32520509 None:intergenic 25.0%
!!! AAATTTGTTAAGTGATGATG+TGG + chr4_1:32520554-32520573 None:intergenic 25.0%
!!! AACAAATTTTTTTAACGGCA+AGG - chr4_1:32520565-32520584 Msa0544300:intron 25.0%
! TTTGTATTTAATCTTGAGTC+AGG - chr4_1:32520625-32520644 Msa0544300:intron 25.0%
! TTGTATTTAATCTTGAGTCA+GGG - chr4_1:32520626-32520645 Msa0544300:intron 25.0%
! TTAGAACACTATTAACATGA+TGG - chr4_1:32520931-32520950 Msa0544300:intron 25.0%
! TAGAACACTATTAACATGAT+GGG - chr4_1:32520932-32520951 Msa0544300:intron 25.0%
!! CATCACATAAAAAATGGATT+TGG + chr4_1:32521054-32521073 None:intergenic 25.0%
!! AAAGGAAAAGAAGTTTTTGA+TGG - chr4_1:32521246-32521265 Msa0544300:intron 25.0%
! AATAAGGTTATGGAAGTTAA+AGG - chr4_1:32521348-32521367 Msa0544300:intron 25.0%
!! GAAGTTTATGATGGAAAATT+TGG - chr4_1:32521375-32521394 Msa0544300:intron 25.0%
! AAAAAGAGAATTGAGAATGA+TGG - chr4_1:32521507-32521526 Msa0544300:intron 25.0%
! TGTTAATGTTGAAAATGTTG+AGG - chr4_1:32521707-32521726 Msa0544300:intron 25.0%
!!! ACACTTTAAGATACTTACAA+TGG + chr4_1:32521781-32521800 None:intergenic 25.0%
! AAGATAATGATTAAAGACCA+AGG + chr4_1:32522210-32522229 None:intergenic 25.0%
!! CTTAAATATGCATTGATGTT+TGG - chr4_1:32522453-32522472 Msa0544300:intron 25.0%
! TACTATAGTTCAAACTTAAC+AGG - chr4_1:32522631-32522650 Msa0544300:intron 25.0%
! TTGAGTATAATCAAGTGTAA+TGG + chr4_1:32522894-32522913 None:intergenic 25.0%
!!! AATTTTGATTGGTTCTGATT+AGG + chr4_1:32523013-32523032 None:intergenic 25.0%
! GATAAAATTGCAGGAAAATT+TGG + chr4_1:32523106-32523125 None:intergenic 25.0%
! AATAACAATGGAAATATCAC+AGG - chr4_1:32523223-32523242 Msa0544300:CDS 25.0%
TCCCTTTCCTAGTTAATATT+AGG - chr4_1:32518383-32518402 Msa0544300:CDS 30.0%
GACCTAATATTAACTAGGAA+AGG + chr4_1:32518388-32518407 None:intergenic 30.0%
CTTGTTTCATTAGATGAGAT+TGG + chr4_1:32518433-32518452 None:intergenic 30.0%
ACTATGAATATGATCCTTGT+CGG + chr4_1:32518521-32518540 None:intergenic 30.0%
TAGTGATACATCATCTTTGT+TGG - chr4_1:32518537-32518556 Msa0544300:CDS 30.0%
AGATTGATCACTACTAGTAT+TGG + chr4_1:32518760-32518779 None:intergenic 30.0%
TAGTAGTGATCAATCTATGA+TGG - chr4_1:32518764-32518783 Msa0544300:CDS 30.0%
!! TGTCTATATTTGATAATGCC+TGG - chr4_1:32518943-32518962 Msa0544300:intron 30.0%
ATTCACGTAGACAACAATAT+GGG - chr4_1:32518999-32519018 Msa0544300:intron 30.0%
GTTAAAATAAAGGGGAGAAA+TGG + chr4_1:32519215-32519234 None:intergenic 30.0%
CATCCAATGATATGTTATCA+CGG - chr4_1:32519308-32519327 Msa0544300:intron 30.0%
TTACCGTGATAACATATCAT+TGG + chr4_1:32519314-32519333 None:intergenic 30.0%
TTGTATTTAATCCTGAGTCA+GGG + chr4_1:32519595-32519614 None:intergenic 30.0%
TTTGTATTTAATCCTGAGTC+AGG + chr4_1:32519596-32519615 None:intergenic 30.0%
!!! AACAGATTTTTTTAACGGCA+GGG + chr4_1:32519656-32519675 None:intergenic 30.0%
!!! TAACAGATTTTTTTAACGGC+AGG + chr4_1:32519657-32519676 None:intergenic 30.0%
! AAATCTGTTAAGTGATGATG+TGG - chr4_1:32519667-32519686 Msa0544300:CDS 30.0%
!!! GGATATTGATTTTCGATTCA+GGG + chr4_1:32520391-32520410 None:intergenic 30.0%
!!! AGGATATTGATTTTCGATTC+AGG + chr4_1:32520390-32520409 None:intergenic 30.0%
ACAGTAAGTATACACAATCA+GGG + chr4_1:32519871-32519890 None:intergenic 30.0%
CTAATTTCGTGTTTACTATC+AGG + chr4_1:32519904-32519923 None:intergenic 30.0%
CTGATAGTAAACACGAAATT+AGG - chr4_1:32519902-32519921 Msa0544300:CDS 30.0%
GATAGTAAACACGAAATTAG+GGG - chr4_1:32519904-32519923 Msa0544300:CDS 30.0%
CGAAATTTCACTAAGATCTT+TGG + chr4_1:32520307-32520326 None:intergenic 30.0%
GAAATTTCGTGTTTAATGTC+AGG - chr4_1:32520318-32520337 Msa0544300:CDS 30.0%
!!! AGGATATTGATTTTCGATTC+AGG - chr4_1:32520390-32520409 Msa0544300:CDS 30.0%
!!! GGATATTGATTTTCGATTCA+GGG - chr4_1:32520391-32520410 Msa0544300:CDS 30.0%
!!! AGGATATTGATTTTCGATTC+AGG - chr4_1:32520390-32520409 Msa0544300:CDS 30.0%
!!! GGATATTGATTTTCGATTCA+GGG - chr4_1:32520391-32520410 Msa0544300:CDS 30.0%
CCAGAAAATTTGAGTAGTAA+GGG + chr4_1:32520717-32520736 None:intergenic 30.0%
! CCTTACTACTCAAATTTTCT+GGG - chr4_1:32520715-32520734 Msa0544300:intron 30.0%
TTTCTGTCCATATCATATAG+GGG + chr4_1:32520751-32520770 None:intergenic 30.0%
GTTTCTGTCCATATCATATA+GGG + chr4_1:32520752-32520771 None:intergenic 30.0%
! TGTTTCTGTCCATATCATAT+AGG + chr4_1:32520753-32520772 None:intergenic 30.0%
AGAACACTATTAACATGATG+GGG - chr4_1:32520933-32520952 Msa0544300:intron 30.0%
TCAGCAAAAACAAAATGCAT+TGG + chr4_1:32520960-32520979 None:intergenic 30.0%
! TTCATTGAACTGTTTTCAGA+TGG - chr4_1:32521083-32521102 Msa0544300:intron 30.0%
AGATTACAATTACATGCGAA+TGG - chr4_1:32521182-32521201 Msa0544300:intron 30.0%
GAGAAAAAAATAGCTGAGAA+TGG - chr4_1:32521279-32521298 Msa0544300:intron 30.0%
AAAAAAATAGCTGAGAATGG+TGG - chr4_1:32521282-32521301 Msa0544300:intron 30.0%
ATCAGCTACTAATAAGGTTA+TGG - chr4_1:32521338-32521357 Msa0544300:intron 30.0%
AAAGGACAAGAAGTTTATGA+TGG - chr4_1:32521366-32521385 Msa0544300:intron 30.0%
GAGAAAAAGAGAATGAAGAA+TGG - chr4_1:32521399-32521418 Msa0544300:intron 30.0%
AAAAAGAGAATGAAGAATGG+TGG - chr4_1:32521402-32521421 Msa0544300:intron 30.0%
!! AAAAGGAAATTTGTTGATGC+TGG - chr4_1:32521435-32521454 Msa0544300:intron 30.0%
!! AAAGGAAATTTGTTGATGCT+GGG - chr4_1:32521436-32521455 Msa0544300:intron 30.0%
!! AAGGTCAAAGAAGTGTTTAA+TGG - chr4_1:32521471-32521490 Msa0544300:intron 30.0%
! TATAGGTTTTCTCATTGATG+AGG + chr4_1:32521610-32521629 None:intergenic 30.0%
CCTAACTGATCTTTACTTAT+AGG + chr4_1:32521627-32521646 None:intergenic 30.0%
CCTATAAGTAAAGATCAGTT+AGG - chr4_1:32521624-32521643 Msa0544300:intron 30.0%
TAACATCCTCATTCTTACTT+AGG + chr4_1:32521692-32521711 None:intergenic 30.0%
TTATTGTGTTAGATCACTGA+TGG - chr4_1:32521871-32521890 Msa0544300:intron 30.0%
!! GATAATACGCTTTAGGAAAT+GGG + chr4_1:32521939-32521958 None:intergenic 30.0%
! AGAAGAAAGTTACCTGTTTT+CGG + chr4_1:32521990-32522009 None:intergenic 30.0%
TAATGCGAAAGCAATCATTA+AGG + chr4_1:32522061-32522080 None:intergenic 30.0%
!!! ACATGCATATTTTAAGACCT+TGG - chr4_1:32522190-32522209 Msa0544300:intron 30.0%
AATTTGATATACATTGCACG+AGG - chr4_1:32522293-32522312 Msa0544300:intron 30.0%
! CATGTTTCTATGCTAGAAAA+TGG - chr4_1:32522364-32522383 Msa0544300:intron 30.0%
! TCTATGCTAGAAAATGGATT+TGG - chr4_1:32522370-32522389 Msa0544300:intron 30.0%
CAACAAACTCAAATCCAAAA+TGG - chr4_1:32522543-32522562 Msa0544300:intron 30.0%
!!! GTATTTTAACTAACCTAGCT+AGG + chr4_1:32522575-32522594 None:intergenic 30.0%
TTCAAACTTAACAGGTACAA+AGG - chr4_1:32522639-32522658 Msa0544300:intron 30.0%
!!! AGTTGTTTTTGCCATTTCTT+TGG + chr4_1:32522735-32522754 None:intergenic 30.0%
AATACTTGAAGAACAAGGAA+GGG + chr4_1:32522840-32522859 None:intergenic 30.0%
GTATAATCAAGTGTAATGGT+TGG + chr4_1:32522890-32522909 None:intergenic 30.0%
!! AAGGGACACAAAATTTTGAT+TGG + chr4_1:32523024-32523043 None:intergenic 30.0%
!! AAAATTTGGATTAGCAGCAA+TGG + chr4_1:32523092-32523111 None:intergenic 30.0%
TGGAGGACCTAATATTAACT+AGG + chr4_1:32518393-32518412 None:intergenic 35.0%
TTCATTAGATGAGATTGGAG+AGG + chr4_1:32518428-32518447 None:intergenic 35.0%
TATGAATATGATCCTTGTCG+GGG + chr4_1:32518519-32518538 None:intergenic 35.0%
CTATGAATATGATCCTTGTC+GGG + chr4_1:32518520-32518539 None:intergenic 35.0%
! GTATTGGTAGTAACAGGATT+GGG + chr4_1:32518744-32518763 None:intergenic 35.0%
!! AGTATTGGTAGTAACAGGAT+TGG + chr4_1:32518745-32518764 None:intergenic 35.0%
!! CTACTAGTATTGGTAGTAAC+AGG + chr4_1:32518750-32518769 None:intergenic 35.0%
GTTCTCTTGTCTTCTGAATT+AGG + chr4_1:32518804-32518823 None:intergenic 35.0%
AGAAGACAAGAGAACTAAGA+GGG - chr4_1:32518809-32518828 Msa0544300:CDS 35.0%
GATTCACGTAGACAACAATA+TGG - chr4_1:32518998-32519017 Msa0544300:intron 35.0%
CGTGATAACATATCATTGGA+TGG + chr4_1:32519310-32519329 None:intergenic 35.0%
TTGATGTAGCAACACATCAT+TGG - chr4_1:32519374-32519393 Msa0544300:intron 35.0%
AGGGATCTAACAGTAAATTG+AGG + chr4_1:32520442-32520461 None:intergenic 35.0%
ACAGTAAGTATACACAGTCA+GGG + chr4_1:32519799-32519818 None:intergenic 35.0%
GTGTATACTTACTGTCAGTT+AGG - chr4_1:32519804-32519823 Msa0544300:CDS 35.0%
GACAGTAAGTATACACAATC+AGG + chr4_1:32519872-32519891 None:intergenic 35.0%
! ATGCTACTTACTCAACACTA+AGG + chr4_1:32520267-32520286 None:intergenic 35.0%
GTGTGTACTTACTATCAGTT+AGG + chr4_1:32520346-32520365 None:intergenic 35.0%
ATAGTAAGTACACACAGTCA+GGG - chr4_1:32520351-32520370 Msa0544300:CDS 35.0%
AGGGATCTAACAGTAAATTG+AGG - chr4_1:32520442-32520461 Msa0544300:CDS 35.0%
! CCCTTACTACTCAAATTTTC+TGG - chr4_1:32520714-32520733 Msa0544300:intron 35.0%
CCCAGAAAATTTGAGTAGTA+AGG + chr4_1:32520718-32520737 None:intergenic 35.0%
ATATCATATAGGGGCAATGA+CGG + chr4_1:32520742-32520761 None:intergenic 35.0%
ACTGACATACACATAAACAC+TGG + chr4_1:32520815-32520834 None:intergenic 35.0%
!! ACGTTTTATTCGCATGTGAT+GGG - chr4_1:32521026-32521045 Msa0544300:intron 35.0%
TTTCAGATGGCTATTCTTCA+AGG - chr4_1:32521096-32521115 Msa0544300:intron 35.0%
GAAAGTGATGCAAGATTGTA+AGG - chr4_1:32521212-32521231 Msa0544300:intron 35.0%
GATGCAAGATTGTAAGGTTA+AGG - chr4_1:32521218-32521237 Msa0544300:intron 35.0%
TGTAAGGTTAAGGAAGTCAA+AGG - chr4_1:32521228-32521247 Msa0544300:intron 35.0%
! CCAAGATCCATAATTTTCCT+TGG + chr4_1:32521318-32521337 None:intergenic 35.0%
CCAAGGAAAATTATGGATCT+TGG - chr4_1:32521315-32521334 Msa0544300:intron 35.0%
TCTTGGATCAGCTACTAATA+AGG - chr4_1:32521332-32521351 Msa0544300:intron 35.0%
! ATGGTGGAGAATTAGTGAAA+AGG - chr4_1:32521418-32521437 Msa0544300:intron 35.0%
! AATTGAGAATGATGGAGAGT+TGG - chr4_1:32521515-32521534 Msa0544300:intron 35.0%
GTTAGTCCTAAGTAAGAATG+AGG - chr4_1:32521683-32521702 Msa0544300:intron 35.0%
!! CGATAATACGCTTTAGGAAA+TGG + chr4_1:32521940-32521959 None:intergenic 35.0%
!! AGAAACATGAGCTTTGAAAG+TGG + chr4_1:32522353-32522372 None:intergenic 35.0%
! TAAATGCATGGATTGCAGAA+TGG + chr4_1:32522403-32522422 None:intergenic 35.0%
GTTGTCATCACAACATATGA+AGG - chr4_1:32522680-32522699 Msa0544300:intron 35.0%
ACATCAACAACAAGCAATGA+TGG - chr4_1:32522782-32522801 Msa0544300:CDS 35.0%
ATACTTGAAGAACAAGGAAG+GGG + chr4_1:32522839-32522858 None:intergenic 35.0%
CAATACTTGAAGAACAAGGA+AGG + chr4_1:32522841-32522860 None:intergenic 35.0%
GTTGCAATACTTGAAGAACA+AGG + chr4_1:32522845-32522864 None:intergenic 35.0%
AAGTGTAATGGTTGGAAATG+GGG + chr4_1:32522882-32522901 None:intergenic 35.0%
CAAGTGTAATGGTTGGAAAT+GGG + chr4_1:32522883-32522902 None:intergenic 35.0%
TCAAGTGTAATGGTTGGAAA+TGG + chr4_1:32522884-32522903 None:intergenic 35.0%
! AAGGAGTTTGAAACTGATCT+GGG + chr4_1:32522940-32522959 None:intergenic 35.0%
! AAAGGAGTTTGAAACTGATC+TGG + chr4_1:32522941-32522960 None:intergenic 35.0%
TTGTGTCCCTTCAAAACTAT+TGG - chr4_1:32523033-32523052 Msa0544300:CDS 35.0%
!!! GAACTGCCAATAGTTTTGAA+GGG + chr4_1:32523042-32523061 None:intergenic 35.0%
AGAGTAGCTGATAAAATTGC+AGG + chr4_1:32523115-32523134 None:intergenic 35.0%
GTCGCAAAAGGTAATAACAA+TGG - chr4_1:32523211-32523230 Msa0544300:CDS 35.0%
TGGGACTAAGTTTCAACTCA+AGG + chr4_1:32518333-32518352 None:intergenic 40.0%
ACTTAGTCCCAACGAAAACA+TGG - chr4_1:32518342-32518361 Msa0544300:CDS 40.0%
! GTAGCATCCATGTTTTCGTT+GGG + chr4_1:32518352-32518371 None:intergenic 40.0%
! TGTAGCATCCATGTTTTCGT+TGG + chr4_1:32518353-32518372 None:intergenic 40.0%
!!! AGAGGTTTGGTTTTCATTGG+AGG + chr4_1:32518410-32518429 None:intergenic 40.0%
!!! TGGAGAGGTTTGGTTTTCAT+TGG + chr4_1:32518413-32518432 None:intergenic 40.0%
TAGATGAGATTGGAGAGGTT+TGG + chr4_1:32518423-32518442 None:intergenic 40.0%
CAGAAGACAAGAGAACTAAG+AGG - chr4_1:32518808-32518827 Msa0544300:CDS 40.0%
ATTCGAGTGTCACACGTTAA+CGG + chr4_1:32518971-32518990 None:intergenic 40.0%
TTAACGTGTGACACTCGAAT+AGG - chr4_1:32518971-32518990 Msa0544300:intron 40.0%
TAACGTGTGACACTCGAATA+GGG - chr4_1:32518972-32518991 Msa0544300:intron 40.0%
! TAAAATGGAAGTGAGGGCAT+TGG + chr4_1:32519025-32519044 None:intergenic 40.0%
!! GTTGGTTTGGTTTGTAGCTT+TGG - chr4_1:32519117-32519136 Msa0544300:intron 40.0%
GGAGAAATGGATGACACTAA+TGG + chr4_1:32519202-32519221 None:intergenic 40.0%
! CAAATAGTCACTTTAGTCCC+TGG - chr4_1:32519544-32519563 Msa0544300:intron 40.0%
! ATAACGGAAGTGTAGAGTCA+GGG + chr4_1:32520597-32520616 None:intergenic 40.0%
GACAGTAAGTATACACAGTC+AGG + chr4_1:32519800-32519819 None:intergenic 40.0%
GTGTATACTTACTGTCAGTC+AGG - chr4_1:32519876-32519895 Msa0544300:CDS 40.0%
ATCTTTCATGCCAACTCCAA+GGG - chr4_1:32519969-32519988 Msa0544300:CDS 40.0%
! AAACATCACATAGTTGGCCT+CGG + chr4_1:32519997-32520016 None:intergenic 40.0%
GATAGTAAGTACACACAGTC+AGG - chr4_1:32520350-32520369 Msa0544300:CDS 40.0%
AGGGACCTAACAGTAAATTG+AGG - chr4_1:32520370-32520389 Msa0544300:CDS 40.0%
GTGTGTACTTACTGTCAGTT+AGG + chr4_1:32520418-32520437 None:intergenic 40.0%
ACAGTAAGTACACACAGTCA+GGG - chr4_1:32520423-32520442 Msa0544300:CDS 40.0%
GGCAAGGACTAAAGTGATAA+CGG - chr4_1:32520581-32520600 Msa0544300:intron 40.0%
! ATAACGGAAGTGTAGAGTCA+GGG - chr4_1:32520597-32520616 Msa0544300:intron 40.0%
TATCATATAGGGGCAATGAC+GGG + chr4_1:32520741-32520760 None:intergenic 40.0%
GTCATTGCCCCTATATGATA+TGG - chr4_1:32520741-32520760 Msa0544300:intron 40.0%
CATGCGAATAAAACGTGTCA+GGG + chr4_1:32521022-32521041 None:intergenic 40.0%
ACATGCGAATAAAACGTGTC+AGG + chr4_1:32521023-32521042 None:intergenic 40.0%
!! CACGTTTTATTCGCATGTGA+TGG - chr4_1:32521025-32521044 Msa0544300:intron 40.0%
! ACTGGTGCCAAGGAAAATTA+TGG - chr4_1:32521308-32521327 Msa0544300:intron 40.0%
!! GAAATTTGTTGATGCTGGGT+TGG - chr4_1:32521440-32521459 Msa0544300:intron 40.0%
TACTAATGCTGAGACTGTGA+TGG - chr4_1:32521569-32521588 Msa0544300:intron 40.0%
! AGATCACTGATGGATGTCAA+TGG - chr4_1:32521881-32521900 Msa0544300:intron 40.0%
GGATGTCAATGGAGAAAGTA+TGG - chr4_1:32521892-32521911 Msa0544300:intron 40.0%
CTGCAACGATAATACGCTTT+AGG + chr4_1:32521946-32521965 None:intergenic 40.0%
TTTAATGGCCATCAACGTAC+TGG + chr4_1:32522431-32522450 None:intergenic 40.0%
ATGGTCGTTGTATCGAAGAT+TGG + chr4_1:32522484-32522503 None:intergenic 40.0%
CCATATAGTAAGTACGTCGA+TGG + chr4_1:32522503-32522522 None:intergenic 40.0%
CCATCGACGTACTTACTATA+TGG - chr4_1:32522500-32522519 Msa0544300:intron 40.0%
! TAGCTAGGTAGCTACCATTT+TGG + chr4_1:32522560-32522579 None:intergenic 40.0%
AAAATGGTAGCTACCTAGCT+AGG - chr4_1:32522559-32522578 Msa0544300:intron 40.0%
AATCTCCAACTACTCCACAA+AGG - chr4_1:32522912-32522931 Msa0544300:intron 40.0%
AGGAATTTGCAGAAGTCTGA+CGG + chr4_1:32522967-32522986 None:intergenic 40.0%
!!! GGAACTGCCAATAGTTTTGA+AGG + chr4_1:32523043-32523062 None:intergenic 40.0%
TGGCAGTTCCAAATATTGCT+CGG - chr4_1:32523053-32523072 Msa0544300:CDS 40.0%
GCTACTCTTACTTCCATGAT+TGG - chr4_1:32523127-32523146 Msa0544300:CDS 40.0%
AATGGGAACAATGTCGCAAA+AGG - chr4_1:32523199-32523218 Msa0544300:CDS 40.0%
ACAGGTAGCAACAACAAAGA+TGG - chr4_1:32523241-32523260 Msa0544300:CDS 40.0%
CAGGTAGCAACAACAAAGAT+GGG - chr4_1:32523242-32523261 Msa0544300:CDS 40.0%
TAGCAACAACAAAGATGGGA+AGG - chr4_1:32523246-32523265 Msa0544300:CDS 40.0%
AGGCAGAGACAACTTCTTGA+TGG + chr4_1:32518492-32518511 None:intergenic 45.0%
AGACAAGAGAACTAAGAGGG+AGG - chr4_1:32518812-32518831 Msa0544300:CDS 45.0%
TTCGAGTGTCACACGTTAAC+GGG + chr4_1:32518970-32518989 None:intergenic 45.0%
!! GATAACGGAAGTGTAGAGTC+AGG + chr4_1:32520596-32520615 None:intergenic 45.0%
GGCAGGGACTAAAGTGATAA+CGG + chr4_1:32519640-32519659 None:intergenic 45.0%
! AAGGAGTATGACGTGTCACA+GGG - chr4_1:32519699-32519718 Msa0544300:intron 45.0%
GTCACAGGGACTAAAGTGAA+AGG - chr4_1:32519713-32519732 Msa0544300:intron 45.0%
CATCTTTCATGCCAACTCCA+AGG - chr4_1:32519968-32519987 Msa0544300:CDS 45.0%
GACAGTAAGTACACACAGTC+AGG - chr4_1:32520422-32520441 Msa0544300:CDS 45.0%
!! GATAACGGAAGTGTAGAGTC+AGG - chr4_1:32520596-32520615 Msa0544300:intron 45.0%
!! TGCTGGGTTGGCTACTAATA+AGG - chr4_1:32521452-32521471 Msa0544300:intron 45.0%
!! ATGATGGAGAGTTGGTGCAA+AGG - chr4_1:32521523-32521542 Msa0544300:intron 45.0%
! AGTTGGTGCAAAGGCAATGT+AGG - chr4_1:32521532-32521551 Msa0544300:intron 45.0%
GTTGGTGCAAAGGCAATGTA+GGG - chr4_1:32521533-32521552 Msa0544300:intron 45.0%
! ATCAGCGTTGAAAAGCTTCG+AGG - chr4_1:32521647-32521666 Msa0544300:intron 45.0%
AGCGTATTATCGTTGCAGCA+TGG - chr4_1:32521948-32521967 Msa0544300:intron 45.0%
AACTGATCTGGGTTCCTTTG+TGG + chr4_1:32522929-32522948 None:intergenic 45.0%
GCAGAAGTCTGACGGTTTAA+AGG + chr4_1:32522959-32522978 None:intergenic 45.0%
TTGAGAGATCAGAGAAGCTG+AGG + chr4_1:32522987-32523006 None:intergenic 45.0%
GGCAGTTCCAAATATTGCTC+GGG - chr4_1:32523054-32523073 Msa0544300:CDS 45.0%
TTGACTGCCCGAGCAATATT+TGG + chr4_1:32523064-32523083 None:intergenic 45.0%
TGGCTGAGTATCACCAATCA+TGG + chr4_1:32523143-32523162 None:intergenic 45.0%
! GTAGCAGCAGTAGTGTTGTT+TGG + chr4_1:32523163-32523182 None:intergenic 45.0%
!!! ATATATATATATAATTTTCT+TGG - chr4_1:32519095-32519114 Msa0544300:intron 5.0%
!! TAAAATATATGTATTTATTA+TGG - chr4_1:32522019-32522038 Msa0544300:intron 5.0%
GTGTGACACTCGAATAGGGA+TGG - chr4_1:32518976-32518995 Msa0544300:intron 50.0%
! CAAGGAGTATGACGTGTCAC+AGG - chr4_1:32519698-32519717 Msa0544300:intron 50.0%
AAGGAGGATGACGTGTCACA+GGG + chr4_1:32520522-32520541 None:intergenic 50.0%
GATGATGTGGCATGCTGACA+AGG + chr4_1:32520541-32520560 None:intergenic 50.0%
TTTGCACCTCGCTGTCACAT+AGG + chr4_1:32520653-32520672 None:intergenic 50.0%
! AGCTGAGAATGGTGGAGTAC+TGG - chr4_1:32521290-32521309 Msa0544300:intron 50.0%
! AGCGTTGAAAAGCTTCGAGG+AGG - chr4_1:32521650-32521669 Msa0544300:intron 50.0%
! AAGCTTCGAGGAGGCTTTGA+AGG - chr4_1:32521659-32521678 Msa0544300:intron 50.0%
! TTTTCGGACTGAGCAACCAC+GGG + chr4_1:32521974-32521993 None:intergenic 50.0%
! GTTTTCGGACTGAGCAACCA+CGG + chr4_1:32521975-32521994 None:intergenic 50.0%
TGGTTGCTCAGTCCGAAAAC+AGG - chr4_1:32521975-32521994 Msa0544300:intron 50.0%
CATGTCTGTGACTGCGATGT+AGG + chr4_1:32522175-32522194 None:intergenic 50.0%
!! GTACTGGCTGCGTAAATGCA+TGG + chr4_1:32522415-32522434 None:intergenic 50.0%
TTACGCAGCCAGTACGTTGA+TGG - chr4_1:32522420-32522439 Msa0544300:intron 50.0%
CTTTGGCTGCTGCAGGTAAA+GGG + chr4_1:32522718-32522737 None:intergenic 50.0%
TCTTTGGCTGCTGCAGGTAA+AGG + chr4_1:32522719-32522738 None:intergenic 50.0%
ACCTGCAGCAGCCAAAGAAA+TGG - chr4_1:32522721-32522740 Msa0544300:intron 50.0%
GGGTTCCTTTGTGGAGTAGT+TGG + chr4_1:32522920-32522939 None:intergenic 50.0%
ATGATCCTTGTCGGGGACAG+AGG + chr4_1:32518512-32518531 None:intergenic 55.0%
! TGTCACACGTTAACGGGTCC+AGG + chr4_1:32518964-32518983 None:intergenic 55.0%
TCCTGAGTCAGGGACCTATG+TGG + chr4_1:32519585-32519604 None:intergenic 55.0%
GATGATGTGGCACGCTGACA+AGG - chr4_1:32519680-32519699 Msa0544300:intron 55.0%
! ATAGTTGGCCTCGGAACCCT+TGG + chr4_1:32519988-32520007 None:intergenic 55.0%
CAAGGAGGATGACGTGTCAC+AGG + chr4_1:32520523-32520542 None:intergenic 55.0%
GATGTGGCATGCTGACAAGG+AGG + chr4_1:32520538-32520557 None:intergenic 55.0%
TGACAGCGAGGTGCAAAGTC+AGG - chr4_1:32520656-32520675 Msa0544300:intron 55.0%
GACAGCGAGGTGCAAAGTCA+GGG - chr4_1:32520657-32520676 Msa0544300:intron 55.0%
!! ATGGTGGAGTACTGGTGCCA+AGG - chr4_1:32521298-32521317 Msa0544300:intron 55.0%
GCCATTTCTTTGGCTGCTGC+AGG + chr4_1:32522725-32522744 None:intergenic 55.0%
TCTGCACCTCGCTGCCACAT+AGG - chr4_1:32519568-32519587 Msa0544300:intron 60.0%
GCCACATAGGTCCCTGACTC+AGG - chr4_1:32519581-32519600 Msa0544300:CDS 60.0%
TGCCAACTCCAAGGGTTCCG+AGG - chr4_1:32519977-32519996 Msa0544300:CDS 60.0%
CAGGGACCTATGTGACAGCG+AGG - chr4_1:32520644-32520663 Msa0544300:intron 60.0%
TATCGTTGCAGCATGGCCCG+TGG - chr4_1:32521955-32521974 Msa0544300:intron 60.0%
TGGCTGCTGCAGGTAAAGGG+TGG + chr4_1:32522715-32522734 None:intergenic 60.0%
CTCTGCCTCTGTCCCCGACA+AGG - chr4_1:32518504-32518523 Msa0544300:CDS 65.0%
CAGGGACCTATGTGGCAGCG+AGG + chr4_1:32519577-32519596 None:intergenic 65.0%
GGCCTCGGAACCCTTGGAGT+TGG + chr4_1:32519982-32520001 None:intergenic 65.0%
GGCAGCGAGGTGCAGAGCCA+GGG + chr4_1:32519564-32519583 None:intergenic 70.0%
TGGCAGCGAGGTGCAGAGCC+AGG + chr4_1:32519565-32519584 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 32518304 32523273 32518304 ID=Msa0544300;Name=Msa0544300
chr4_1 mRNA 32518304 32523273 32518304 ID=Msa0544300-mRNA-1;Parent=Msa0544300;Name=Msa0544300-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|5|0|594
chr4_1 exon 32523004 32523273 32523004 ID=Msa0544300-mRNA-1:exon:8330;Parent=Msa0544300-mRNA-1
chr4_1 exon 32522744 32522842 32522744 ID=Msa0544300-mRNA-1:exon:8329;Parent=Msa0544300-mRNA-1
chr4_1 exon 32519795 32520475 32519795 ID=Msa0544300-mRNA-1:exon:8328;Parent=Msa0544300-mRNA-1
chr4_1 exon 32519581 32519694 32519581 ID=Msa0544300-mRNA-1:exon:8327;Parent=Msa0544300-mRNA-1
chr4_1 exon 32518304 32518924 32518304 ID=Msa0544300-mRNA-1:exon:8326;Parent=Msa0544300-mRNA-1
chr4_1 CDS 32523004 32523273 32523004 ID=Msa0544300-mRNA-1:cds;Parent=Msa0544300-mRNA-1
chr4_1 CDS 32522744 32522842 32522744 ID=Msa0544300-mRNA-1:cds;Parent=Msa0544300-mRNA-1
chr4_1 CDS 32519795 32520475 32519795 ID=Msa0544300-mRNA-1:cds;Parent=Msa0544300-mRNA-1
chr4_1 CDS 32519581 32519694 32519581 ID=Msa0544300-mRNA-1:cds;Parent=Msa0544300-mRNA-1
chr4_1 CDS 32518304 32518924 32518304 ID=Msa0544300-mRNA-1:cds;Parent=Msa0544300-mRNA-1
Gene Sequence

>Msa0544300

ATGGATTCAAATCCAGTTAATATTAACCTTGAGTTGAAACTTAGTCCCAACGAAAACATGGATGCTACACATAGTACTATCCCTTTCCTAGTTAATATTAGGTCCTCCAATGAAAACCAAACCTCTCCAATCTCATCTAATGAAACAAGAATAGAGTTTGATTTCTTTAAGGACAACAACAATGACCATCAAGAAGTTGTCTCTGCCTCTGTCCCCGACAAGGATCATATTCATAGTGATACATCATCTTTGTTGGAACTCAAGCTGAGTCTTGGTCCCAATCCTGTTACTACCAATACTAGTAGTGATCAATCTATGATGGATGACGACATGTCACCTAATTCAGAAGACAAGAGAACTAAGAGGGAGATGGCTATTCTTCAAGGCGAGCTTAAACGAAAGAAAACAGAGAACTGTAGATTAAAATTGATATATGATCAGCTTAAAACAGATTACAATTACATGCGAATGGATTTCGAGAAAGTGATGCAAGATTGTAAGGTTAAGGAAGTCAAAGGAAAAGAAGTTTTTGATGGAAAAATTAAAGAGAAAAAAATAGCTGAGAATGGTGGAGTACTGGTGCCAAGGAAAATTATGGATCTTGGATCAGCTACTAATAAGGTTATGGAAGTTAAAGGACAAGAAGTTTATGATGGAAAATTTGGTGAGAAAAAGAGAATGAAGAATGGTGGAGAATTAGTGAAAAGGAAATTTGTTGATGCTGGGTTGGCTACTAATAAGGTCAAAGAAGTGTTTAATGGTAAATGTGAAAAGAAAAAGAGAATTGAGAATGATGGAGAGTTGGTGCAAAGGCAATGTAGGGATCTTGTGTTGATTACTAATGCTGAGACTGTGATGGATCATGAAGCTTCTTCCTCATCAATGAGAAAACCTATAAGTAAAGATCAGTTAGGATCAGCGTTGAAAAGCTTCGAGGAGGCTTTGAAGGAGTTAGTCCTAAGTAAGAATGAGGATGTTAATGTTGAAAATGTTGAGGCTACATTGACAAAAGCAAGAGTTACTATTAGAGCTAGATCAGAAGAAACCATTATCACTGATGGATGTCAATGGAGAAAGTATGGACAGAAACTGTCGAAAAGAAACCCATTTCCTAAAGCGTATTATCGTTGCAGCATGGCCCGTGGTTGCTCAGTCCGAAAACAGGTACAAAGGTGTGCTCTTGACAGAGCAGTTGTCATCACAACATATGAAGGAAATCACAACCACCCTTTACCTGCAGCAGCCAAAGAAATGGCAAAAACAACTTCTACAGCTGCAAAGATGCTTCTTTCAACATCAACAACAAGCAATGATGGACAATTGAATGCAAATTTACTCAGAAGAACACCCCTTCCTTGTTCTTCAAGTATTGCAACTATCTCAACTTCTGCCCCATTTCCAACCATTACACTTGATTATACTCAATCTCCAACTACTCCACAAAGGAACCCAGATCAGTTTCAAACTCCTTTAAACCGTCAGACTTCTGCAAATTCCTCAGCTTCTCTGATCTCTCAAACACCTAATCAGAACCAATCAAAATTTTGTGTCCCTTCAAAACTATTGGCAGTTCCAAATATTGCTCGGGCAGTCAACGCTGCCATTGCTGCTAATCCAAATTTTCCTGCAATTTTATCAGCTACTCTTACTTCCATGATTGGTGATACTCAGCCAAACAACACTACTGCTGCTACTGATAATAATAATAATAATGGGAACAATGTCGCAAAAGGTAATAACAATGGAAATATCACAGGTAGCAACAACAAAGATGGGAAGGAATAA
Protein sequence

>Msa0544300

MDSNPVNINLELKLSPNENMDATHSTIPFLVNIRSSNENQTSPISSNETRIEFDFFKDNNNDHQEVVSASVPDKDHIHSDTSSLLELKLSLGPNPVTTNTSSDQSMMDDDMSPNSEDKRTKREMAILQGELKRKKTENCRLKLIYDQLKTDYNYMRMDFEKVMQDCKVKEVKGKEVFDGKIKEKKIAENGGVLVPRKIMDLGSATNKVMEVKGQEVYDGKFGEKKRMKNGGELVKRKFVDAGLATNKVKEVFNGKCEKKKRIENDGELVQRQCRDLVLITNAETVMDHEASSSSMRKPISKDQLGSALKSFEEALKELVLSKNEDVNVENVEATLTKARVTIRARSEETIITDGCQWRKYGQKLSKRNPFPKAYYRCSMARGCSVRKQVQRCALDRAVVITTYEGNHNHPLPAAAKEMAKTTSTAAKMLLSTSTTSNDGQLNANLLRRTPLPCSSSIATISTSAPFPTITLDYTQSPTTPQRNPDQFQTPLNRQTSANSSASLISQTPNQNQSKFCVPSKLLAVPNIARAVNAAIAANPNFPAILSATLTSMIGDTQPNNTTAATDNNNNNGNNVAKGNNNGNITGSNNKDGKE*