Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545220 | XP_003606095.2 | 96.957 | 460 | 14 | 0 | 1 | 460 | 1 | 460 | 0.0 | 924 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545220 | sp|Q9FV71|E2FB_ARATH | 57.403 | 439 | 150 | 10 | 19 | 433 | 13 | 438 | 1.69e-156 | 454 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545220 | A0A396I6V2 | 96.957 | 460 | 14 | 0 | 1 | 460 | 1 | 460 | 0.0 | 924 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0545220 | TF | E2F-DP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545220 | MtrunA17_Chr4g0025881 | 96.957 | 460 | 14 | 0 | 1 | 460 | 1 | 460 | 0.0 | 924 |
| Msa0545220 | MtrunA17_Chr1g0177351 | 59.767 | 430 | 167 | 5 | 19 | 445 | 25 | 451 | 7.44e-174 | 496 |
| Msa0545220 | MtrunA17_Chr3g0142581 | 48.264 | 288 | 139 | 3 | 129 | 416 | 93 | 370 | 5.45e-84 | 263 |
| Msa0545220 | MtrunA17_Chr4g0059551 | 46.269 | 67 | 36 | 0 | 138 | 204 | 17 | 83 | 6.90e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545220 | AT5G22220.2 | 57.403 | 439 | 150 | 10 | 19 | 433 | 13 | 438 | 1.72e-157 | 454 |
| Msa0545220 | AT5G22220.3 | 57.175 | 439 | 148 | 11 | 19 | 433 | 13 | 435 | 3.84e-155 | 448 |
| Msa0545220 | AT2G36010.1 | 53.103 | 435 | 158 | 11 | 19 | 423 | 39 | 457 | 2.22e-139 | 409 |
| Msa0545220 | AT2G36010.3 | 53.089 | 437 | 157 | 12 | 19 | 423 | 39 | 459 | 5.60e-138 | 405 |
| Msa0545220 | AT2G36010.2 | 43.515 | 478 | 169 | 14 | 19 | 423 | 39 | 488 | 3.50e-104 | 320 |
| Msa0545220 | AT1G47870.1 | 50.179 | 279 | 97 | 5 | 137 | 414 | 154 | 391 | 2.52e-79 | 252 |
| Msa0545220 | AT1G47870.2 | 50.179 | 279 | 97 | 5 | 137 | 414 | 153 | 390 | 2.70e-79 | 252 |
| Msa0545220 | AT5G14960.1 | 41.892 | 74 | 43 | 0 | 131 | 204 | 6 | 79 | 4.48e-12 | 67.8 |
| Msa0545220 | AT3G01330.1 | 37.647 | 85 | 48 | 1 | 138 | 222 | 21 | 100 | 6.18e-11 | 64.3 |
Find 189 sgRNAs with CRISPR-Local
Find 567 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATTACAATATACAAAAT+TGG | 0.122692 | 4_1:-35168125 | None:intergenic |
| TTCTGGACTGGGTGGAAATT+TGG | 0.170746 | 4_1:-35167143 | None:intergenic |
| TGGAGCTTTAATTGCTATTA+AGG | 0.174915 | 4_1:-35166711 | None:intergenic |
| ATTTCCTTCCCTTTATCTTC+TGG | 0.188827 | 4_1:-35167202 | None:intergenic |
| AGATGATGATGGAGGGAATT+TGG | 0.226347 | 4_1:-35162122 | None:intergenic |
| TCAATATTTGAAGCATGATT+TGG | 0.248499 | 4_1:-35167814 | None:intergenic |
| TTTCCTTCCCTTTATCTTCT+GGG | 0.249433 | 4_1:-35167201 | None:intergenic |
| CGGCGGTGGCGGGAGGAGTT+CGG | 0.263074 | 4_1:-35162295 | None:intergenic |
| CAATAGATGTTTACCTTGTT+AGG | 0.273630 | 4_1:+35166908 | Msa0545220:CDS |
| CTGGTCCGGCGCGGCGGTGG+CGG | 0.277114 | 4_1:-35162306 | None:intergenic |
| TGCAGACTGATGCTGATTAC+TGG | 0.284549 | 4_1:+35167535 | Msa0545220:intron |
| TTGTTAACTTTGTTAACTTC+TGG | 0.286522 | 4_1:-35167160 | None:intergenic |
| AAAGAACTTGCCCTGCTTCC+AGG | 0.295888 | 4_1:+35166564 | Msa0545220:CDS |
| CAAACCCCTGGCTCAAATAT+TGG | 0.299052 | 4_1:+35164801 | Msa0545220:CDS |
| TCAATCCAACCTCGCAGGTC+TGG | 0.301085 | 4_1:-35167949 | None:intergenic |
| GGACTATCCTGTATCTTCTC+TGG | 0.310480 | 4_1:-35166867 | None:intergenic |
| CAATATTTGAAGCATGATTT+GGG | 0.315454 | 4_1:-35167813 | None:intergenic |
| CTAACAAGGTAAACATCTAT+TGG | 0.320099 | 4_1:-35166907 | None:intergenic |
| AAGAACGCCACTTTCTCTTC+AGG | 0.321260 | 4_1:-35167898 | None:intergenic |
| GGCGGTGGCGGGAGGAGTTC+GGG | 0.323869 | 4_1:-35162294 | None:intergenic |
| GCCGGTTGGATGAACAAATA+AGG | 0.325041 | 4_1:+35166261 | Msa0545220:CDS |
| GAGAGAAAGGGAAGAGGTAG+AGG | 0.330670 | 4_1:-35162155 | None:intergenic |
| AATTTGGCAGGTTCTCCTTC+AGG | 0.331106 | 4_1:+35164994 | Msa0545220:intron |
| CAGTTTCGAGGTCTTGATTC+CGG | 0.333420 | 4_1:-35162418 | None:intergenic |
| AAGTTTCATATGACATTCTA+TGG | 0.334315 | 4_1:+35169963 | Msa0545220:three_prime_UTR |
| CTGCCGGCGATGGAAGGAAA+TGG | 0.334804 | 4_1:-35162257 | None:intergenic |
| TGGTCCGGCGCGGCGGTGGC+GGG | 0.337037 | 4_1:-35162305 | None:intergenic |
| TCTGTTCAGACGCCTGTATC+TGG | 0.353596 | 4_1:+35164720 | Msa0545220:CDS |
| AACTTTGTTAACTTCTGGAC+TGG | 0.365621 | 4_1:-35167155 | None:intergenic |
| TCTTCTGGGACCACAGTTGA+TGG | 0.368300 | 4_1:-35167187 | None:intergenic |
| TTCCCCGCCTTTCCAGATAC+AGG | 0.368366 | 4_1:-35164732 | None:intergenic |
| TGCCGGCGATGGAAGGAAAT+GGG | 0.369744 | 4_1:-35162256 | None:intergenic |
| TCCTCTTAAATTACCTCATC+AGG | 0.378875 | 4_1:-35166761 | None:intergenic |
| TCTTGATTCCGGCGGTGGTC+AGG | 0.379340 | 4_1:-35162407 | None:intergenic |
| TTGAAGCTGATTCAGGTGAT+AGG | 0.380824 | 4_1:+35164664 | Msa0545220:CDS |
| TAATGCTGCTGACACATTAG+AGG | 0.382091 | 4_1:+35165629 | Msa0545220:CDS |
| GAGAGATCTATGTATGTGTT+TGG | 0.383335 | 4_1:-35162197 | None:intergenic |
| TGTCGATATGACAGCTCATT+AGG | 0.389268 | 4_1:+35165042 | Msa0545220:CDS |
| ACCTTATTTGTTCATCCAAC+CGG | 0.394452 | 4_1:-35166262 | None:intergenic |
| GAGGTTTCATGGAGGAGAAA+GGG | 0.395991 | 4_1:-35162349 | None:intergenic |
| GACTATCCTGTATCTTCTCT+GGG | 0.396885 | 4_1:-35166866 | None:intergenic |
| CCATTACAATATACAAAATT+GGG | 0.401529 | 4_1:-35168124 | None:intergenic |
| TTGGGCCCATTGTGCTTCTC+AGG | 0.407562 | 4_1:-35166888 | None:intergenic |
| TCAATTTGAAGAGAAGTTTG+AGG | 0.408550 | 4_1:+35167096 | Msa0545220:CDS |
| GGAGGTTTCATGGAGGAGAA+AGG | 0.410632 | 4_1:-35162350 | None:intergenic |
| GACCTGCGAGGTTGGATTGA+AGG | 0.412522 | 4_1:+35167952 | Msa0545220:three_prime_UTR |
| CAATCCAACCTCGCAGGTCT+GGG | 0.414239 | 4_1:-35167948 | None:intergenic |
| ATGATGGAGGGAATTTGGTT+CGG | 0.420901 | 4_1:-35162117 | None:intergenic |
| CGAGGTCTTGATTCCGGCGG+TGG | 0.422971 | 4_1:-35162412 | None:intergenic |
| CAGGTCTGGGTGGATGTCAT+AGG | 0.423398 | 4_1:-35167935 | None:intergenic |
| TGAAGTAGAATTTCGCTCTC+AGG | 0.425268 | 4_1:+35169920 | Msa0545220:three_prime_UTR |
| ACAAATGTTCTTGAAGGGAT+TGG | 0.428377 | 4_1:+35165758 | Msa0545220:CDS |
| TAACAAGGTAAACATCTATT+GGG | 0.432965 | 4_1:-35166906 | None:intergenic |
| TTGGCTGCTGCAGTGGATCC+AGG | 0.433496 | 4_1:-35164693 | None:intergenic |
| GATCTGGTCCGGCGCGGCGG+TGG | 0.433940 | 4_1:-35162309 | None:intergenic |
| ACGTTCTGTTCTCCACATAT+CGG | 0.435938 | 4_1:-35167586 | None:intergenic |
| AATTGAAAATTTAACAATTG+AGG | 0.437163 | 4_1:+35166235 | Msa0545220:CDS |
| TTGAGGCTTCATCCTACAGT+AGG | 0.437988 | 4_1:-35167859 | None:intergenic |
| TCCTCCCGCCACCGCCGCGC+CGG | 0.438568 | 4_1:+35162301 | Msa0545220:CDS |
| GGAAATAATCTCACCCCTGC+TGG | 0.438993 | 4_1:+35165015 | Msa0545220:CDS |
| GATATTACAAATGTTCTTGA+AGG | 0.450884 | 4_1:+35165752 | Msa0545220:CDS |
| GGAGAGAAAGGGAGGTTTCA+TGG | 0.452955 | 4_1:-35162360 | None:intergenic |
| CGACATCCACCTGCCGGCGA+TGG | 0.457326 | 4_1:-35162267 | None:intergenic |
| GACTGGCCATTCAACTCCTC+AGG | 0.466044 | 4_1:-35168017 | None:intergenic |
| CTGTGGTCCCAGAAGATAAA+GGG | 0.466071 | 4_1:+35167194 | Msa0545220:CDS |
| CATTTCCTTCCATCGCCGGC+AGG | 0.467424 | 4_1:+35162258 | Msa0545220:five_prime_UTR |
| AGGCGTCTGAACAGAACTAT+TGG | 0.467482 | 4_1:-35164712 | None:intergenic |
| TCATATCGACATGGACCAGC+AGG | 0.470858 | 4_1:-35165030 | None:intergenic |
| GAGTTGAATGGCCAGTCAAA+TGG | 0.472674 | 4_1:+35168023 | Msa0545220:three_prime_UTR |
| CTGTAGGATGAAGCCTCAAA+AGG | 0.474980 | 4_1:+35167863 | Msa0545220:exon |
| GTTGACGTTGCTGCATGATC+TGG | 0.476646 | 4_1:-35162325 | None:intergenic |
| ACATACACGTCGCGCTAAGT+AGG | 0.476905 | 4_1:-35169861 | None:intergenic |
| ATCGCCGGCAGGTGGATGTC+GGG | 0.477202 | 4_1:+35162269 | Msa0545220:exon |
| CATCGCCGGCAGGTGGATGT+CGG | 0.479471 | 4_1:+35162268 | Msa0545220:exon |
| ACGCCTGTATCTGGAAAGGC+GGG | 0.480089 | 4_1:+35164729 | Msa0545220:CDS |
| TATTCACCAATATTTGAGCC+AGG | 0.483329 | 4_1:-35164807 | None:intergenic |
| TAAATTACCTCATCAGGATC+AGG | 0.485605 | 4_1:-35166755 | None:intergenic |
| ATAATCTCCGGCGGAGAGAA+AGG | 0.486445 | 4_1:-35162372 | None:intergenic |
| TATGTATGTGTTTGGAAAGT+GGG | 0.488736 | 4_1:-35162189 | None:intergenic |
| CAACGATGGCTTCAGTTTCG+AGG | 0.490949 | 4_1:-35162430 | None:intergenic |
| TGTATCTGGAAAGGCGGGGA+AGG | 0.492656 | 4_1:+35164734 | Msa0545220:CDS |
| TCCGGCGCGGCGGTGGCGGG+AGG | 0.494668 | 4_1:-35162302 | None:intergenic |
| TCCACCCAGACCTGCGAGGT+TGG | 0.496081 | 4_1:+35167944 | Msa0545220:three_prime_UTR |
| TGCGAAGCGGTGATAATCTC+CGG | 0.499792 | 4_1:-35162384 | None:intergenic |
| AGGGAAACTAACCTGGAAGC+AGG | 0.501301 | 4_1:-35166575 | None:intergenic |
| ATATTACAAATGTTCTTGAA+GGG | 0.502697 | 4_1:+35165753 | Msa0545220:CDS |
| GCGGGAGAGAGAAAGGGAAG+AGG | 0.503142 | 4_1:-35162161 | None:intergenic |
| ACTTTGTTAACTTCTGGACT+GGG | 0.504154 | 4_1:-35167154 | None:intergenic |
| TGTGTCTACAGGTGCAAAAG+AGG | 0.505867 | 4_1:+35165720 | Msa0545220:intron |
| AGCTCCACATGGTACCACTT+TGG | 0.505985 | 4_1:+35166727 | Msa0545220:CDS |
| ACTCACGAAGTCGTGATTGT+TGG | 0.507659 | 4_1:-35167269 | None:intergenic |
| AACAATCACGACTTCGTGAG+TGG | 0.509503 | 4_1:+35167271 | Msa0545220:CDS |
| ACTGTGGTCCCAGAAGATAA+AGG | 0.510416 | 4_1:+35167193 | Msa0545220:CDS |
| TGAGGCTTCATCCTACAGTA+GGG | 0.512617 | 4_1:-35167858 | None:intergenic |
| AAACTATCATCGGCCTCCCC+TGG | 0.512893 | 4_1:-35165930 | None:intergenic |
| AAACCTCCCTTTCTCTCCGC+CGG | 0.513017 | 4_1:+35162365 | Msa0545220:CDS |
| TTCCTTCCATCGCCGGCAGG+TGG | 0.513681 | 4_1:+35162261 | Msa0545220:five_prime_UTR |
| GGGCTGGATGTTTCAAAACC+AGG | 0.516489 | 4_1:+35165912 | Msa0545220:CDS |
| ATAGTCCTGAGAAGCACAAT+GGG | 0.520665 | 4_1:+35166883 | Msa0545220:CDS |
| AGAACTATTGGCTGCTGCAG+TGG | 0.520736 | 4_1:-35164700 | None:intergenic |
| GGAGAAGAAGAAGATGATGA+TGG | 0.521164 | 4_1:-35162133 | None:intergenic |
| TCAGGTGATAGGATGACTCC+TGG | 0.524104 | 4_1:+35164675 | Msa0545220:CDS |
| GTATCTGGAAAGGCGGGGAA+GGG | 0.525349 | 4_1:+35164735 | Msa0545220:CDS |
| TATTTACAGCTGGAGTAGAA+TGG | 0.525592 | 4_1:+35167734 | Msa0545220:intron |
| GCGCGACGTGTATGTTTGAA+AGG | 0.527718 | 4_1:+35169869 | Msa0545220:three_prime_UTR |
| ATTATCCCCAGAGAAGATAC+AGG | 0.527897 | 4_1:+35166860 | Msa0545220:CDS |
| AGAGAAAGGGAAGAGGTAGA+GGG | 0.534051 | 4_1:-35162154 | None:intergenic |
| AACAATTGAGGAACGCCGGT+TGG | 0.534246 | 4_1:+35166247 | Msa0545220:CDS |
| ACTTCAAGAAGAATATTGTA+TGG | 0.535285 | 4_1:+35167771 | Msa0545220:CDS |
| ATCCACCTGCCGGCGATGGA+AGG | 0.535692 | 4_1:-35162263 | None:intergenic |
| GAAGAAGAAGATGATGATGG+AGG | 0.536292 | 4_1:-35162130 | None:intergenic |
| TTCGCTCTCAGGCAAAGCGC+TGG | 0.538755 | 4_1:+35169931 | Msa0545220:three_prime_UTR |
| GCTTCATCCTACAGTAGGGT+TGG | 0.540759 | 4_1:-35167854 | None:intergenic |
| TGGTTCGGATATTGATGTGG+AGG | 0.543849 | 4_1:-35162102 | None:intergenic |
| AAGAAGAAGATGATGATGGA+GGG | 0.545997 | 4_1:-35162129 | None:intergenic |
| GCCGGCGATGGAAGGAAATG+GGG | 0.546464 | 4_1:-35162255 | None:intergenic |
| TTCACCAATATTTGAGCCAG+GGG | 0.548468 | 4_1:-35164805 | None:intergenic |
| CGTTGCTGCATGATCTGGTC+CGG | 0.555254 | 4_1:-35162320 | None:intergenic |
| TGTACAATTAGCCATTTGAC+TGG | 0.562651 | 4_1:-35168034 | None:intergenic |
| TCTAGAAGTACAAAGTCACT+TGG | 0.563803 | 4_1:-35168074 | None:intergenic |
| CATGATCTGGTCCGGCGCGG+CGG | 0.564187 | 4_1:-35162312 | None:intergenic |
| GTGCAGAGACAAGATGGTGA+AGG | 0.564861 | 4_1:+35167229 | Msa0545220:CDS |
| GCTTCGCACCTGACCACCGC+CGG | 0.565704 | 4_1:+35162399 | Msa0545220:CDS |
| TCTGGAAAGGCGGGGAAGGG+AGG | 0.567142 | 4_1:+35164738 | Msa0545220:CDS |
| AACCTTCAATCCAACCTCGC+AGG | 0.568624 | 4_1:-35167954 | None:intergenic |
| TAATCTCCGGCGGAGAGAAA+GGG | 0.570236 | 4_1:-35162371 | None:intergenic |
| ATAGAAGTGCAGAGACAAGA+TGG | 0.570446 | 4_1:+35167223 | Msa0545220:CDS |
| AAGTGACTTTGTACTTCTAG+AGG | 0.571747 | 4_1:+35168076 | Msa0545220:three_prime_UTR |
| GCTTGTCCTGAGGAGTTGAA+TGG | 0.572667 | 4_1:+35168011 | Msa0545220:three_prime_UTR |
| GGTTCGGATATTGATGTGGA+GGG | 0.573378 | 4_1:-35162101 | None:intergenic |
| ATTCACCAATATTTGAGCCA+GGG | 0.575795 | 4_1:-35164806 | None:intergenic |
| GGTGCCCGACATCCACCTGC+CGG | 0.575823 | 4_1:-35162273 | None:intergenic |
| ATGTTAGCATAACCGATATG+TGG | 0.576570 | 4_1:+35167574 | Msa0545220:CDS |
| GGCTGGATGTTTCAAAACCA+GGG | 0.577072 | 4_1:+35165913 | Msa0545220:CDS |
| CTATGTATGTGTTTGGAAAG+TGG | 0.579224 | 4_1:-35162190 | None:intergenic |
| ATTTGGTTCGGATATTGATG+TGG | 0.582286 | 4_1:-35162105 | None:intergenic |
| GGATGTCATAGGTTCTCAGT+TGG | 0.585261 | 4_1:-35167924 | None:intergenic |
| TTAATAAAACAAGCAGAGGA+TGG | 0.586297 | 4_1:+35165591 | Msa0545220:CDS |
| CGAGTTAATAAAACAAGCAG+AGG | 0.589364 | 4_1:+35165587 | Msa0545220:CDS |
| GCTGGATGTTTCAAAACCAG+GGG | 0.589441 | 4_1:+35165914 | Msa0545220:CDS |
| AGAACTGGAACTCAAACCCC+TGG | 0.591457 | 4_1:+35164789 | Msa0545220:CDS |
| CCGGCGATGGAAGGAAATGG+GGG | 0.591968 | 4_1:-35162254 | None:intergenic |
| AACATTAAGCATACCTAACA+AGG | 0.592586 | 4_1:-35166921 | None:intergenic |
| GGGAGATGCAAGAAAGACTA+CGG | 0.594499 | 4_1:+35166379 | Msa0545220:intron |
| ACAGTAGGGTTGGATGCAGA+AGG | 0.603796 | 4_1:-35167844 | None:intergenic |
| ATGCTTACAGCAACATCTGA+AGG | 0.604268 | 4_1:-35167310 | None:intergenic |
| GACGCCTGTATCTGGAAAGG+CGG | 0.604699 | 4_1:+35164728 | Msa0545220:CDS |
| ATTTAACAATTGAGGAACGC+CGG | 0.605519 | 4_1:+35166243 | Msa0545220:CDS |
| GGGGTGAGATTATTTCCTGA+AGG | 0.606593 | 4_1:-35165009 | None:intergenic |
| CATATCGACATGGACCAGCA+GGG | 0.607007 | 4_1:-35165029 | None:intergenic |
| GGGAAACTAACCTGGAAGCA+GGG | 0.607358 | 4_1:-35166574 | None:intergenic |
| ATGCTTCAAATATTGATGAA+CGG | 0.607410 | 4_1:+35167821 | Msa0545220:CDS |
| TCTGCATCCAACCCTACTGT+AGG | 0.610294 | 4_1:+35167847 | Msa0545220:CDS |
| TTGTTAACTTCTGGACTGGG+TGG | 0.611129 | 4_1:-35167151 | None:intergenic |
| TGCAGAGACAAGATGGTGAA+GGG | 0.612592 | 4_1:+35167230 | Msa0545220:CDS |
| AAAGTAGAAGTTAATAACGA+GGG | 0.614126 | 4_1:-35170004 | None:intergenic |
| AATATTTGAAGCATGATTTG+GGG | 0.617491 | 4_1:-35167812 | None:intergenic |
| AGCTCAAGAACAGAATTCAG+TGG | 0.618807 | 4_1:+35165795 | Msa0545220:CDS |
| ATACATTTCAGCAATTGAAG+CGG | 0.622738 | 4_1:+35164622 | Msa0545220:intron |
| GTCTACAGGTGCAAAAGAGG+AGG | 0.622913 | 4_1:+35165723 | Msa0545220:intron |
| TCCAACCTCGCAGGTCTGGG+TGG | 0.623480 | 4_1:-35167945 | None:intergenic |
| GATAGTCCTGAGAAGCACAA+TGG | 0.625691 | 4_1:+35166882 | Msa0545220:CDS |
| GGAAGGGAGGAAAATCCTCT+AGG | 0.631535 | 4_1:+35164751 | Msa0545220:CDS |
| TTGTTGGTAAGATCTGTACT+AGG | 0.631622 | 4_1:-35167253 | None:intergenic |
| ACAATCACGACTTCGTGAGT+GGG | 0.632953 | 4_1:+35167272 | Msa0545220:CDS |
| GGATGTTTCAAAACCAGGGG+AGG | 0.633132 | 4_1:+35165917 | Msa0545220:CDS |
| GGAAGTACCTGATCCTGATG+AGG | 0.635583 | 4_1:+35166748 | Msa0545220:CDS |
| GGCGGTGGTCAGGTGCGAAG+CGG | 0.638045 | 4_1:-35162397 | None:intergenic |
| AGAAGTTAACAAAGTTAACA+AGG | 0.642145 | 4_1:+35167162 | Msa0545220:CDS |
| TCAGACGCCTGTATCTGGAA+AGG | 0.645384 | 4_1:+35164725 | Msa0545220:CDS |
| AGGATCAGGTACTTCCAAAG+TGG | 0.647576 | 4_1:-35166741 | None:intergenic |
| CTGCATGATCTGGTCCGGCG+CGG | 0.652743 | 4_1:-35162315 | None:intergenic |
| ATATCGACATGGACCAGCAG+GGG | 0.655262 | 4_1:-35165028 | None:intergenic |
| GAGAAGTTTGAGGAGATCCA+CGG | 0.655684 | 4_1:+35167106 | Msa0545220:CDS |
| TCTCCGGCGGAGAGAAAGGG+AGG | 0.656909 | 4_1:-35162368 | None:intergenic |
| TCATCAAGAAGCTTGTCCTG+AGG | 0.669807 | 4_1:+35168001 | Msa0545220:three_prime_UTR |
| GAAAGTAGAAGTTAATAACG+AGG | 0.685693 | 4_1:-35170005 | None:intergenic |
| GGTCCCAGAAGATAAAGGGA+AGG | 0.692159 | 4_1:+35167198 | Msa0545220:CDS |
| CGCCTGTATCTGGAAAGGCG+GGG | 0.701641 | 4_1:+35164730 | Msa0545220:CDS |
| TTTCGAGGTCTTGATTCCGG+CGG | 0.705050 | 4_1:-35162415 | None:intergenic |
| GACATCCACCCAGACCTGCG+AGG | 0.708386 | 4_1:+35167940 | Msa0545220:three_prime_UTR |
| AATGAGCTGTCATATCGACA+TGG | 0.710086 | 4_1:-35165039 | None:intergenic |
| ACTATCCTGTATCTTCTCTG+GGG | 0.711189 | 4_1:-35166865 | None:intergenic |
| ACTTCCAAAGTGGTACCATG+TGG | 0.714904 | 4_1:-35166731 | None:intergenic |
| ATAGCAATTAAAGCTCCACA+TGG | 0.715913 | 4_1:+35166716 | Msa0545220:CDS |
| TAACAAGGATCCATCAACTG+TGG | 0.718425 | 4_1:+35167177 | Msa0545220:CDS |
| GAGAAAGGGAGGTTTCATGG+AGG | 0.723613 | 4_1:-35162357 | None:intergenic |
| GAAGCGGTGATAATCTCCGG+CGG | 0.749300 | 4_1:-35162381 | None:intergenic |
| TGGATGCAACATCAACACCG+TGG | 0.767009 | 4_1:-35167123 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTTTTTATATAAATT+TGG | + | chr4_1:35164978-35164997 | Msa0545220:intron | 0.0% |
| !!! | TTTTTGTGATTTTTTTTTTT+TGG | + | chr4_1:35162503-35162522 | Msa0545220:intron | 10.0% |
| !!! | TATTATAGAAATTTTTTATG+CGG | + | chr4_1:35163469-35163488 | Msa0545220:intron | 10.0% |
| !!! | TTATTTTCTTTGAATATATT+AGG | - | chr4_1:35164878-35164897 | None:intergenic | 10.0% |
| !!! | TTCAAAGAAAATAAATATTT+TGG | + | chr4_1:35164884-35164903 | Msa0545220:intron | 10.0% |
| !!! | TTTTTAACAATATGATATAT+AGG | - | chr4_1:35165538-35165557 | None:intergenic | 10.0% |
| !!! | TCTTGTATATAAATTTATTT+TGG | + | chr4_1:35166649-35166668 | Msa0545220:intron | 10.0% |
| !! | TAAACATCTTAAATATTAAT+TGG | - | chr4_1:35168359-35168378 | None:intergenic | 10.0% |
| !!! | TTATTTTTAACTTTGTTTAT+AGG | - | chr4_1:35168493-35168512 | None:intergenic | 10.0% |
| !! | AACACAAAAAAAATAAAAAT+TGG | + | chr4_1:35168551-35168570 | Msa0545220:intron | 10.0% |
| !!! | TTAAACTTTTTTTTATTAGT+TGG | + | chr4_1:35168597-35168616 | Msa0545220:intron | 10.0% |
| !!! | TAAACTTTTTTTTATTAGTT+GGG | + | chr4_1:35168598-35168617 | Msa0545220:intron | 10.0% |
| !!! | GATTTTAGTTAAAATAATAA+GGG | + | chr4_1:35169629-35169648 | Msa0545220:intron | 10.0% |
| !! | TAAAATGATTCAATTCAAAA+AGG | - | chr4_1:35163568-35163587 | None:intergenic | 15.0% |
| !!! | AAATTTAGTGTTTTCAAAAT+TGG | + | chr4_1:35164237-35164256 | Msa0545220:intron | 15.0% |
| !!! | AATTTAGTGTTTTCAAAATT+GGG | + | chr4_1:35164238-35164257 | Msa0545220:intron | 15.0% |
| !! | ACAATCAATAGAAAATATTA+TGG | - | chr4_1:35164596-35164615 | None:intergenic | 15.0% |
| !!! | ATTTTTTATATAAATTTGGC+AGG | + | chr4_1:35164982-35165001 | Msa0545220:intron | 15.0% |
| !! | TTTCTGACTTATATAATTTA+TGG | + | chr4_1:35166131-35166150 | Msa0545220:intron | 15.0% |
| !! | TATTAAATCCTTATAAATGT+TGG | + | chr4_1:35166176-35166195 | Msa0545220:intron | 15.0% |
| !! | AATTGAAAATTTAACAATTG+AGG | + | chr4_1:35166235-35166254 | Msa0545220:CDS | 15.0% |
| !!! | TTTTATTTGTTTATTATTGC+AGG | + | chr4_1:35166358-35166377 | Msa0545220:intron | 15.0% |
| !! | TTTATTTGTTTATTATTGCA+GGG | + | chr4_1:35166359-35166378 | Msa0545220:intron | 15.0% |
| !! | AAATTATGAACATATAAGTA+CGG | - | chr4_1:35166475-35166494 | None:intergenic | 15.0% |
| !!! | AATTTATTTTGGATTTTAAC+TGG | + | chr4_1:35166660-35166679 | Msa0545220:intron | 15.0% |
| !! | AGGAAATTACAAAAAAATTA+TGG | - | chr4_1:35167709-35167728 | None:intergenic | 15.0% |
| !!! | AAAAAAAGTTTAATTTTCCT+GGG | - | chr4_1:35168590-35168609 | None:intergenic | 15.0% |
| !!! | AAAAAAAAGTTTAATTTTCC+TGG | - | chr4_1:35168591-35168610 | None:intergenic | 15.0% |
| !!! | TTTAATTGATTTTGATTTCA+TGG | + | chr4_1:35169166-35169185 | Msa0545220:intron | 15.0% |
| !! | TCATGGTTTATAAATAATAT+TGG | + | chr4_1:35169183-35169202 | Msa0545220:intron | 15.0% |
| !! | AAATAATATTGGATGAAAAA+TGG | + | chr4_1:35169194-35169213 | Msa0545220:intron | 15.0% |
| !! | TAAATTATAAAGGGTAAATA+TGG | + | chr4_1:35169607-35169626 | Msa0545220:intron | 15.0% |
| !!! | GGATTTTAGTTAAAATAATA+AGG | + | chr4_1:35169628-35169647 | Msa0545220:intron | 15.0% |
| !! | TAAAATAATAAGGGTAAAAA+TGG | + | chr4_1:35169638-35169657 | Msa0545220:intron | 15.0% |
| !! | AAAAAAAATAGAAAACTCAC+AGG | - | chr4_1:35162464-35162483 | None:intergenic | 20.0% |
| !!! | TTTTTTGGTTTTTAGTTTAG+TGG | + | chr4_1:35162518-35162537 | Msa0545220:intron | 20.0% |
| !!! | GTATTTAGTTGTTAATTTGT+TGG | + | chr4_1:35162592-35162611 | Msa0545220:intron | 20.0% |
| !! | GAGGAAATTTAATTATATTC+AGG | + | chr4_1:35162689-35162708 | Msa0545220:intron | 20.0% |
| !!! | GTGATTTTCTTAAATAAGTA+CGG | + | chr4_1:35162780-35162799 | Msa0545220:intron | 20.0% |
| !!! | TGATTTTCTTAAATAAGTAC+GGG | + | chr4_1:35162781-35162800 | Msa0545220:intron | 20.0% |
| !! | TTTGCAAAGAATAAGAAAAA+GGG | - | chr4_1:35163779-35163798 | None:intergenic | 20.0% |
| !!! | TTTTGCAAAGAATAAGAAAA+AGG | - | chr4_1:35163780-35163799 | None:intergenic | 20.0% |
| !!! | ATTGACATAGTTAAAAGTAT+TGG | + | chr4_1:35163803-35163822 | Msa0545220:intron | 20.0% |
| !!! | TTGACATAGTTAAAAGTATT+GGG | + | chr4_1:35163804-35163823 | Msa0545220:intron | 20.0% |
| !! | AGAAAAAAAGTAAAGAACAA+TGG | + | chr4_1:35164121-35164140 | Msa0545220:intron | 20.0% |
| !!! | TCTAATTTTTAATATCAGGA+AGG | + | chr4_1:35164205-35164224 | Msa0545220:intron | 20.0% |
| !!! | CTAATTTTTAATATCAGGAA+GGG | + | chr4_1:35164206-35164225 | Msa0545220:intron | 20.0% |
| !!! | GATGTATTTTAGTCTTTTAT+AGG | - | chr4_1:35164333-35164352 | None:intergenic | 20.0% |
| !!! | TAATCTTTTTTTTTAAGCCA+CGG | + | chr4_1:35164541-35164560 | Msa0545220:intron | 20.0% |
| !!! | TTCCTTTAATTATCGATTTT+AGG | + | chr4_1:35164945-35164964 | Msa0545220:intron | 20.0% |
| !! | TACCTAAAATCGATAATTAA+AGG | - | chr4_1:35164950-35164969 | None:intergenic | 20.0% |
| !! | CTAATCAAAACTGAAAAATT+AGG | - | chr4_1:35165073-35165092 | None:intergenic | 20.0% |
| !! | ATTAGTTAATTGTTGATCAT+CGG | + | chr4_1:35165088-35165107 | Msa0545220:intron | 20.0% |
| !! | CAAATTATATTTAGTTAGGA+GGG | - | chr4_1:35165307-35165326 | None:intergenic | 20.0% |
| !! | CAGTAAAACATTTAAAGAAA+GGG | - | chr4_1:35165485-35165504 | None:intergenic | 20.0% |
| !! | TCATATTGTTAAAAACAAAC+AGG | + | chr4_1:35165543-35165562 | Msa0545220:intron | 20.0% |
| !! | ATATTACAAATGTTCTTGAA+GGG | + | chr4_1:35165753-35165772 | Msa0545220:CDS | 20.0% |
| !!! | CAACATTTTGGATAAAATTA+TGG | - | chr4_1:35165856-35165875 | None:intergenic | 20.0% |
| !! | TAAACTAGAAAAACTATCAT+CGG | - | chr4_1:35165943-35165962 | None:intergenic | 20.0% |
| !!! | TTCTTTAAAAGTTAGAAAGA+CGG | + | chr4_1:35166014-35166033 | Msa0545220:intron | 20.0% |
| !!! | GTAAAGCATACTTTTTTATT+TGG | + | chr4_1:35166089-35166108 | Msa0545220:intron | 20.0% |
| !!! | TTTTTCCTAAATCCATATTT+TGG | + | chr4_1:35166441-35166460 | Msa0545220:intron | 20.0% |
| !! | TTCATTGTAATTCATAGATA+GGG | - | chr4_1:35166597-35166616 | None:intergenic | 20.0% |
| !! | ATTCATTGTAATTCATAGAT+AGG | - | chr4_1:35166598-35166617 | None:intergenic | 20.0% |
| !!! | TTACAATGAATATTTTGATG+TGG | + | chr4_1:35166607-35166626 | Msa0545220:intron | 20.0% |
| !! | AATTTATATACAAGAAGCAA+AGG | - | chr4_1:35166644-35166663 | None:intergenic | 20.0% |
| !!! | TTTTGTATTTGCAATTTGTT+AGG | + | chr4_1:35167358-35167377 | Msa0545220:intron | 20.0% |
| !!! | TTGCATGTTTTTTGTTTTAA+AGG | + | chr4_1:35167450-35167469 | Msa0545220:intron | 20.0% |
| !! | CCATTACAATATACAAAATT+GGG | - | chr4_1:35168127-35168146 | None:intergenic | 20.0% |
| !! | ACCATTACAATATACAAAAT+TGG | - | chr4_1:35168128-35168147 | None:intergenic | 20.0% |
| !!! | AATTTTGTATATTGTAATGG+TGG | + | chr4_1:35168127-35168146 | Msa0545220:three_prime_UTR | 20.0% |
| !!! | ATTTTGTATATTGTAATGGT+GGG | + | chr4_1:35168128-35168147 | Msa0545220:three_prime_UTR | 20.0% |
| !! | TAGTTGTAAATTGACATAAA+AGG | + | chr4_1:35168283-35168302 | Msa0545220:intron | 20.0% |
| !!! | ATTTGTTGATGTTATGTAAA+TGG | - | chr4_1:35169026-35169045 | None:intergenic | 20.0% |
| !! | ACAATTAATTAAGAGTAGAA+TGG | - | chr4_1:35169081-35169100 | None:intergenic | 20.0% |
| !! | TAGGGATCTATTGAATTTTA+GGG | + | chr4_1:35162561-35162580 | Msa0545220:intron | 25.0% |
| ! | CTTAGAGTTGAATATTAGTT+AGG | + | chr4_1:35162623-35162642 | Msa0545220:intron | 25.0% |
| !! | TAGTTAGGTTTTACTAAAAG+AGG | + | chr4_1:35162638-35162657 | Msa0545220:intron | 25.0% |
| ! | AATAAACCATTTATCCAAAC+AGG | - | chr4_1:35162923-35162942 | None:intergenic | 25.0% |
| !!! | CAATTTTCACAAGCTTTTTT+CGG | - | chr4_1:35163047-35163066 | None:intergenic | 25.0% |
| ! | CATGTTGCAATGAAAATAAT+TGG | + | chr4_1:35163242-35163261 | Msa0545220:intron | 25.0% |
| !! | GAAAATAATTGGTCTATTCT+AGG | + | chr4_1:35163253-35163272 | Msa0545220:intron | 25.0% |
| ! | TATATTGCAAGGAAAAGAAT+TGG | + | chr4_1:35163286-35163305 | Msa0545220:intron | 25.0% |
| ! | AGTAAGCTCATAAACTAAAT+GGG | - | chr4_1:35163345-35163364 | None:intergenic | 25.0% |
| ! | AAGTAAGCTCATAAACTAAA+TGG | - | chr4_1:35163346-35163365 | None:intergenic | 25.0% |
| ! | TTTATTTGCCAAATTTCGTA+TGG | - | chr4_1:35163419-35163438 | None:intergenic | 25.0% |
| ! | ATACGAAATTTGGCAAATAA+AGG | + | chr4_1:35163418-35163437 | Msa0545220:intron | 25.0% |
| ! | AATTTGGCAAATAAAGGAAA+TGG | + | chr4_1:35163424-35163443 | Msa0545220:intron | 25.0% |
| ! | ATTTGGCAAATAAAGGAAAT+GGG | + | chr4_1:35163425-35163444 | Msa0545220:intron | 25.0% |
| ! | TTCCTAAAAACGTATGTATT+TGG | - | chr4_1:35163616-35163635 | None:intergenic | 25.0% |
| ! | AATCATTATCTTACTCGTTA+AGG | + | chr4_1:35163658-35163677 | Msa0545220:intron | 25.0% |
| ! | ATTTCTCATAAATGCAAGTA+GGG | + | chr4_1:35163748-35163767 | Msa0545220:intron | 25.0% |
| ! | GATGTGAAGCTATATATTTA+TGG | + | chr4_1:35163881-35163900 | Msa0545220:intron | 25.0% |
| !!! | GTTCTTTACTTTTTTTCTGT+CGG | - | chr4_1:35164119-35164138 | None:intergenic | 25.0% |
| !! | GAAGAAAGTATAAACAAGAA+AGG | + | chr4_1:35164155-35164174 | Msa0545220:intron | 25.0% |
| ! | AAAGTATAAACAAGAAAGGA+GGG | + | chr4_1:35164159-35164178 | Msa0545220:intron | 25.0% |
| !! | GCTGTCTAATTTTTAATATC+AGG | + | chr4_1:35164201-35164220 | Msa0545220:intron | 25.0% |
| !! | AGTCTTTTATAGGTAGAAAA+GGG | - | chr4_1:35164323-35164342 | None:intergenic | 25.0% |
| !! | TAGTCTTTTATAGGTAGAAA+AGG | - | chr4_1:35164324-35164343 | None:intergenic | 25.0% |
| !! | TTTTCGAAACTTTGTTAAGT+TGG | + | chr4_1:35164833-35164852 | Msa0545220:intron | 25.0% |
| ! | ATCGATAATTAAAGGAAAGA+TGG | - | chr4_1:35164942-35164961 | None:intergenic | 25.0% |
| ! | GTAATGTGTAAAGTAAACAA+TGG | - | chr4_1:35165285-35165304 | None:intergenic | 25.0% |
| ! | CCAAATTATATTTAGTTAGG+AGG | - | chr4_1:35165308-35165327 | None:intergenic | 25.0% |
| ! | CCTCCTAACTAAATATAATT+TGG | + | chr4_1:35165305-35165324 | Msa0545220:intron | 25.0% |
| ! | CCACCAAATTATATTTAGTT+AGG | - | chr4_1:35165311-35165330 | None:intergenic | 25.0% |
| ! | CCTAACTAAATATAATTTGG+TGG | + | chr4_1:35165308-35165327 | Msa0545220:intron | 25.0% |
| !!! | TTTAAGTTGAACCAATGTTT+AGG | + | chr4_1:35165382-35165401 | Msa0545220:intron | 25.0% |
| !!! | TTAAGTTGAACCAATGTTTA+GGG | + | chr4_1:35165383-35165402 | Msa0545220:intron | 25.0% |
| ! | CCAGTAAAACATTTAAAGAA+AGG | - | chr4_1:35165486-35165505 | None:intergenic | 25.0% |
| !! | CCTTTCTTTAAATGTTTTAC+TGG | + | chr4_1:35165483-35165502 | Msa0545220:intron | 25.0% |
| ! | GATATTACAAATGTTCTTGA+AGG | + | chr4_1:35165752-35165771 | Msa0545220:CDS | 25.0% |
| !!! | TCTTGAGCTTTTTTTCTATA+AGG | - | chr4_1:35165784-35165803 | None:intergenic | 25.0% |
| !!! | GTAAAAGTGTTTCAACATTT+TGG | - | chr4_1:35165868-35165887 | None:intergenic | 25.0% |
| !!! | TGATAGTTTTTCTAGTTTAC+AGG | + | chr4_1:35165944-35165963 | Msa0545220:CDS | 25.0% |
| !!! | AAGGATGGATTTTTTATCTT+TGG | + | chr4_1:35165972-35165991 | Msa0545220:intron | 25.0% |
| !! | TCTTTAAAAGTTAGAAAGAC+GGG | + | chr4_1:35166015-35166034 | Msa0545220:intron | 25.0% |
| ! | CATAAAATGATTTACAGATC+AGG | - | chr4_1:35166058-35166077 | None:intergenic | 25.0% |
| ! | ATGGCATATAATAGATTTGA+TGG | + | chr4_1:35166150-35166169 | Msa0545220:intron | 25.0% |
| ! | ATCAAACACCAACATTTATA+AGG | - | chr4_1:35166187-35166206 | None:intergenic | 25.0% |
| ! | ATAAACTCTTAATAGACAAC+AGG | - | chr4_1:35166339-35166358 | None:intergenic | 25.0% |
| ! | AATGACCAAAATATGGATTT+AGG | - | chr4_1:35166449-35166468 | None:intergenic | 25.0% |
| ! | TAACAAGGTAAACATCTATT+GGG | - | chr4_1:35166909-35166928 | None:intergenic | 25.0% |
| !! | TTAGGTATGCTTAATGTTTT+TGG | + | chr4_1:35166926-35166945 | Msa0545220:intron | 25.0% |
| !! | TAGGTATGCTTAATGTTTTT+GGG | + | chr4_1:35166927-35166946 | Msa0545220:intron | 25.0% |
| ! | TTGTTAACTTTGTTAACTTC+TGG | - | chr4_1:35167163-35167182 | None:intergenic | 25.0% |
| ! | AGAAGTTAACAAAGTTAACA+AGG | + | chr4_1:35167162-35167181 | Msa0545220:CDS | 25.0% |
| ! | TTCTGATAAGAAAAAAACCT+TGG | + | chr4_1:35167485-35167504 | Msa0545220:intron | 25.0% |
| ! | ACTTCAAGAAGAATATTGTA+TGG | + | chr4_1:35167771-35167790 | Msa0545220:CDS | 25.0% |
| !! | AATATTTGAAGCATGATTTG+GGG | - | chr4_1:35167815-35167834 | None:intergenic | 25.0% |
| !! | CAATATTTGAAGCATGATTT+GGG | - | chr4_1:35167816-35167835 | None:intergenic | 25.0% |
| !! | TCAATATTTGAAGCATGATT+TGG | - | chr4_1:35167817-35167836 | None:intergenic | 25.0% |
| ! | ATGCTTCAAATATTGATGAA+CGG | + | chr4_1:35167821-35167840 | Msa0545220:CDS | 25.0% |
| !! | GTTCAAAATAAATCCTTTTG+AGG | - | chr4_1:35167879-35167898 | None:intergenic | 25.0% |
| !! | CCCAATTTTGTATATTGTAA+TGG | + | chr4_1:35168124-35168143 | Msa0545220:three_prime_UTR | 25.0% |
| !! | TTTTGTATATTGTAATGGTG+GGG | + | chr4_1:35168129-35168148 | Msa0545220:three_prime_UTR | 25.0% |
| !! | GATAAGCTAATTAAAGTGTT+TGG | + | chr4_1:35168235-35168254 | Msa0545220:intron | 25.0% |
| !! | AAAGTGTTTGGTAAAATTAG+CGG | + | chr4_1:35168247-35168266 | Msa0545220:intron | 25.0% |
| ! | AAGTTTCATATGACATTCTA+TGG | + | chr4_1:35169963-35169982 | Msa0545220:three_prime_UTR | 25.0% |
| ! | AAAGTAGAAGTTAATAACGA+GGG | - | chr4_1:35170007-35170026 | None:intergenic | 25.0% |
| TATGTATGTGTTTGGAAAGT+GGG | - | chr4_1:35162192-35162211 | None:intergenic | 30.0% | |
| !!! | GTTTTTAGTTTAGTGGTGTA+AGG | + | chr4_1:35162525-35162544 | Msa0545220:intron | 30.0% |
| TAAGGTGATTTAAGGAACTA+GGG | + | chr4_1:35162543-35162562 | Msa0545220:intron | 30.0% | |
| ! | CTAGGGATCTATTGAATTTT+AGG | + | chr4_1:35162560-35162579 | Msa0545220:intron | 30.0% |
| TGTTCAGTTATATGAGCTTT+AGG | + | chr4_1:35162896-35162915 | Msa0545220:intron | 30.0% | |
| GTTCAGTTATATGAGCTTTA+GGG | + | chr4_1:35162897-35162916 | Msa0545220:intron | 30.0% | |
| AATGGTTTATTTGCAGCTTA+TGG | + | chr4_1:35162932-35162951 | Msa0545220:intron | 30.0% | |
| !!! | TAAGTTTTGTGAGAGTGTTT+GGG | - | chr4_1:35163094-35163113 | None:intergenic | 30.0% |
| !!! | ATAAGTTTTGTGAGAGTGTT+TGG | - | chr4_1:35163095-35163114 | None:intergenic | 30.0% |
| GTACTAAACCTAAAGACTAA+GGG | - | chr4_1:35163155-35163174 | None:intergenic | 30.0% | |
| AGTACTAAACCTAAAGACTA+AGG | - | chr4_1:35163156-35163175 | None:intergenic | 30.0% | |
| AGTACTTGATCAATGTATTG+AGG | + | chr4_1:35163170-35163189 | Msa0545220:intron | 30.0% | |
| ! | AATAATTGGTCTATTCTAGG+TGG | + | chr4_1:35163256-35163275 | Msa0545220:intron | 30.0% |
| ! | AAGGAAAAGAATTGGTCTAT+TGG | + | chr4_1:35163294-35163313 | Msa0545220:intron | 30.0% |
| GTAAGCTCATAAACTAAATG+GGG | - | chr4_1:35163344-35163363 | None:intergenic | 30.0% | |
| AACCTCATTTAAAAACAACC+AGG | - | chr4_1:35163375-35163394 | None:intergenic | 30.0% | |
| ! | TTTTAAATGAGGTTTCTGTC+TGG | + | chr4_1:35163381-35163400 | Msa0545220:intron | 30.0% |
| ! | GAGATTTTCCATACGAAATT+TGG | + | chr4_1:35163408-35163427 | Msa0545220:intron | 30.0% |
| ACTAAAATACTAACGAAACG+TGG | - | chr4_1:35163520-35163539 | None:intergenic | 30.0% | |
| ! | TGCCAAATACATACGTTTTT+AGG | + | chr4_1:35163611-35163630 | Msa0545220:intron | 30.0% |
| ATGATTGAATGACTCATTTG+CGG | - | chr4_1:35163644-35163663 | None:intergenic | 30.0% | |
| CTACTTGCATTTATGAGAAA+TGG | - | chr4_1:35163749-35163768 | None:intergenic | 30.0% | |
| CATTTCTCATAAATGCAAGT+AGG | + | chr4_1:35163747-35163766 | Msa0545220:intron | 30.0% | |
| TGCCTAATTACATTGAATTG+TGG | + | chr4_1:35163916-35163935 | Msa0545220:intron | 30.0% | |
| AGCCACAATTCAATGTAATT+AGG | - | chr4_1:35163921-35163940 | None:intergenic | 30.0% | |
| !! | GTAAAGAACAATGGATTAGA+AGG | + | chr4_1:35164130-35164149 | Msa0545220:intron | 30.0% |
| ! | GAAAGTATAAACAAGAAAGG+AGG | + | chr4_1:35164158-35164177 | Msa0545220:intron | 30.0% |
| ! | CTTTAAGTTAGTCTAATGGT+GGG | + | chr4_1:35164261-35164280 | Msa0545220:intron | 30.0% |
| AAAGAAAACAAAAAGGAGTG+TGG | - | chr4_1:35164287-35164306 | None:intergenic | 30.0% | |
| GGTAGGAAAAGAAAACAAAA+AGG | - | chr4_1:35164294-35164313 | None:intergenic | 30.0% | |
| ! | TCTTTTATAGGTAGAAAAGG+GGG | - | chr4_1:35164321-35164340 | None:intergenic | 30.0% |
| ! | GTCTTTTATAGGTAGAAAAG+GGG | - | chr4_1:35164322-35164341 | None:intergenic | 30.0% |
| TAAATCAACGTTGTTGATCT+CGG | - | chr4_1:35164467-35164486 | None:intergenic | 30.0% | |
| !! | AGATCAACAACGTTGATTTA+TGG | + | chr4_1:35164467-35164486 | Msa0545220:intron | 30.0% |
| ATACATTTCAGCAATTGAAG+CGG | + | chr4_1:35164622-35164641 | Msa0545220:intron | 30.0% | |
| ! | ACTAAATATAATTTGGTGGC+AGG | + | chr4_1:35165312-35165331 | Msa0545220:intron | 30.0% |
| ! | TAAGTTGAACCAATGTTTAG+GGG | + | chr4_1:35165384-35165403 | Msa0545220:intron | 30.0% |
| TTAATAAAACAAGCAGAGGA+TGG | + | chr4_1:35165591-35165610 | Msa0545220:CDS | 30.0% | |
| TGGTCAATTATCAAAGGAAT+TGG | - | chr4_1:35165890-35165909 | None:intergenic | 30.0% | |
| ! | AATTCCTTTGATAATTGACC+AGG | + | chr4_1:35165889-35165908 | Msa0545220:intron | 30.0% |
| ! | ATTCCTTTGATAATTGACCA+GGG | + | chr4_1:35165890-35165909 | Msa0545220:intron | 30.0% |
| !!! | GTTTTTCTAGTTTACAGGTT+AGG | + | chr4_1:35165949-35165968 | Msa0545220:intron | 30.0% |
| TTGGATGAACAAATAAGGTT+TGG | + | chr4_1:35166266-35166285 | Msa0545220:intron | 30.0% | |
| TGGATGAACAAATAAGGTTT+GGG | + | chr4_1:35166267-35166286 | Msa0545220:intron | 30.0% | |
| TAATCTCTTTCCACTCTTAA+AGG | + | chr4_1:35166515-35166534 | Msa0545220:intron | 30.0% | |
| ! | CAAAAAGAAACCTTTAAGAG+TGG | - | chr4_1:35166528-35166547 | None:intergenic | 30.0% |
| ! | TTGCTATTAAGGTTTCATTC+TGG | - | chr4_1:35166703-35166722 | None:intergenic | 30.0% |
| ! | TGGAGCTTTAATTGCTATTA+AGG | - | chr4_1:35166714-35166733 | None:intergenic | 30.0% |
| CTAACAAGGTAAACATCTAT+TGG | - | chr4_1:35166910-35166929 | None:intergenic | 30.0% | |
| CAATAGATGTTTACCTTGTT+AGG | + | chr4_1:35166908-35166927 | Msa0545220:CDS | 30.0% | |
| AACATTAAGCATACCTAACA+AGG | - | chr4_1:35166924-35166943 | None:intergenic | 30.0% | |
| ! | TTTTGCTAACATTTGCTTCA+AGG | + | chr4_1:35166952-35166971 | Msa0545220:intron | 30.0% |
| TTTGCTAACATTTGCTTCAA+GGG | + | chr4_1:35166953-35166972 | Msa0545220:intron | 30.0% | |
| TCAATTTGAAGAGAAGTTTG+AGG | + | chr4_1:35167096-35167115 | Msa0545220:CDS | 30.0% | |
| ACAATTTCAAATTAGCTCCA+AGG | - | chr4_1:35167505-35167524 | None:intergenic | 30.0% | |
| AATGAATGAAATGGAGACTA+AGG | - | chr4_1:35167626-35167645 | None:intergenic | 30.0% | |
| TGTGTGTGTAATGAATGAAA+TGG | - | chr4_1:35167635-35167654 | None:intergenic | 30.0% | |
| TTCCTTGATATATTTACAGC+TGG | + | chr4_1:35167724-35167743 | Msa0545220:intron | 30.0% | |
| TCTAGAGGAAAAAAAAAACG+TGG | + | chr4_1:35168091-35168110 | Msa0545220:three_prime_UTR | 30.0% | |
| TGTCATTACATGAAACGAAA+TGG | + | chr4_1:35168640-35168659 | Msa0545220:intron | 30.0% | |
| AAATGACTAAAATACCCCTT+CGG | + | chr4_1:35168821-35168840 | Msa0545220:intron | 30.0% | |
| AATTGAAAACCCAGAATTCA+TGG | + | chr4_1:35168941-35168960 | Msa0545220:intron | 30.0% | |
| ATCGAATAGTTACAGAGAAT+AGG | - | chr4_1:35168981-35169000 | None:intergenic | 30.0% | |
| TAGAATGGTGAAGGAAAAAA+TGG | - | chr4_1:35169066-35169085 | None:intergenic | 30.0% | |
| AATTAAGAGTAGAATGGTGA+AGG | - | chr4_1:35169075-35169094 | None:intergenic | 30.0% | |
| AAAAAGTAATGCTCAGATCT+TGG | + | chr4_1:35169115-35169134 | Msa0545220:intron | 30.0% | |
| TATTGGATGAAAAATGGAAG+AGG | + | chr4_1:35169200-35169219 | Msa0545220:intron | 30.0% | |
| CAGCAAAATTATCAGGATTT+GGG | - | chr4_1:35169358-35169377 | None:intergenic | 30.0% | |
| ACAGCAAAATTATCAGGATT+TGG | - | chr4_1:35169359-35169378 | None:intergenic | 30.0% | |
| ! | AAATCCTGATAATTTTGCTG+TGG | + | chr4_1:35169358-35169377 | Msa0545220:intron | 30.0% |
| AAATGAAAACCCAGAATTCA+TGG | - | chr4_1:35169418-35169437 | None:intergenic | 30.0% | |
| AAATGACTAAAATACCCCTT+CGG | - | chr4_1:35168821-35168840 | None:intergenic | 30.0% | |
| AAAAATAGCTTATAAGCTCG+TGG | + | chr4_1:35169718-35169737 | Msa0545220:intron | 30.0% | |
| TTGACAAAATAAGCTCTGTT+TGG | - | chr4_1:35169787-35169806 | None:intergenic | 30.0% | |
| CTATAAGCTATAAGCTCATT+TGG | + | chr4_1:35169820-35169839 | Msa0545220:intron | 30.0% | |
| GAAAGTAGAAGTTAATAACG+AGG | - | chr4_1:35170008-35170027 | None:intergenic | 30.0% | |
| !! | ATTTGGTTCGGATATTGATG+TGG | - | chr4_1:35162108-35162127 | None:intergenic | 35.0% |
| !! | AAGAAGAAGATGATGATGGA+GGG | - | chr4_1:35162132-35162151 | None:intergenic | 35.0% |
| CTATGTATGTGTTTGGAAAG+TGG | - | chr4_1:35162193-35162212 | None:intergenic | 35.0% | |
| GAGAGATCTATGTATGTGTT+TGG | - | chr4_1:35162200-35162219 | None:intergenic | 35.0% | |
| TAGTGGTGTAAGGTGATTTA+AGG | + | chr4_1:35162535-35162554 | Msa0545220:intron | 35.0% | |
| GTAAGGTGATTTAAGGAACT+AGG | + | chr4_1:35162542-35162561 | Msa0545220:intron | 35.0% | |
| CTCTTCAAATTTAGTGCTTG+AGG | + | chr4_1:35162670-35162689 | Msa0545220:intron | 35.0% | |
| TCAAATAAGCCAATCCAAAC+TGG | + | chr4_1:35163129-35163148 | Msa0545220:intron | 35.0% | |
| AATGTATTGAGGAACTTGAG+AGG | + | chr4_1:35163181-35163200 | Msa0545220:intron | 35.0% | |
| ATTGTAAGCTGGTCAATTCT+AGG | + | chr4_1:35163209-35163228 | Msa0545220:intron | 35.0% | |
| GTGGAAAGGATTATATTGCA+AGG | + | chr4_1:35163275-35163294 | Msa0545220:intron | 35.0% | |
| ! | TAAACTAAATGGGGCTTTTC+AGG | - | chr4_1:35163335-35163354 | None:intergenic | 35.0% |
| !!! | TGCCTGGTTGTTTTTAAATG+AGG | + | chr4_1:35163370-35163389 | Msa0545220:intron | 35.0% |
| TACTCGTTAAGGAATTCTGA+TGG | + | chr4_1:35163669-35163688 | Msa0545220:intron | 35.0% | |
| !! | TGAATTGTGGCTTTGTGATA+CGG | + | chr4_1:35163929-35163948 | Msa0545220:intron | 35.0% |
| ! | TAAGTGTAAGACCCTTGTTT+CGG | - | chr4_1:35164023-35164042 | None:intergenic | 35.0% |
| !! | TGGGCTTTAAGTTAGTCTAA+TGG | + | chr4_1:35164257-35164276 | Msa0545220:intron | 35.0% |
| ! | GCTTTAAGTTAGTCTAATGG+TGG | + | chr4_1:35164260-35164279 | Msa0545220:intron | 35.0% |
| CGCTATTAAAAAGAGGAGAA+GGG | - | chr4_1:35164382-35164401 | None:intergenic | 35.0% | |
| ! | CCTTCTCCTCTTTTTAATAG+CGG | + | chr4_1:35164380-35164399 | Msa0545220:intron | 35.0% |
| ATGACAAAAAGCAACAGAAC+TGG | + | chr4_1:35164774-35164793 | Msa0545220:CDS | 35.0% | |
| ATTCACCAATATTTGAGCCA+GGG | - | chr4_1:35164809-35164828 | None:intergenic | 35.0% | |
| TATTCACCAATATTTGAGCC+AGG | - | chr4_1:35164810-35164829 | None:intergenic | 35.0% | |
| AGTTAATTGTTGATCATCGG+TGG | + | chr4_1:35165091-35165110 | Msa0545220:intron | 35.0% | |
| TGGTGGAGGTTATTTGAAAA+CGG | - | chr4_1:35165175-35165194 | None:intergenic | 35.0% | |
| TGTCATGAAAAAAAGGTTGG+TGG | - | chr4_1:35165192-35165211 | None:intergenic | 35.0% | |
| GAGTGTCATGAAAAAAAGGT+TGG | - | chr4_1:35165195-35165214 | None:intergenic | 35.0% | |
| GACTGAGTGTCATGAAAAAA+AGG | - | chr4_1:35165199-35165218 | None:intergenic | 35.0% | |
| TCAACTTAAACCAGAGTTGA+GGG | - | chr4_1:35165231-35165250 | None:intergenic | 35.0% | |
| TTCAACTTAAACCAGAGTTG+AGG | - | chr4_1:35165232-35165251 | None:intergenic | 35.0% | |
| AAGTTGAACCAATGTTTAGG+GGG | + | chr4_1:35165385-35165404 | Msa0545220:intron | 35.0% | |
| AATGGCTAAAACAGGTTAAG+TGG | + | chr4_1:35165414-35165433 | Msa0545220:intron | 35.0% | |
| ATGGCTAAAACAGGTTAAGT+GGG | + | chr4_1:35165415-35165434 | Msa0545220:intron | 35.0% | |
| TACTGGTGAGTAAAGTTTGA+AGG | + | chr4_1:35165500-35165519 | Msa0545220:intron | 35.0% | |
| CGAGTTAATAAAACAAGCAG+AGG | + | chr4_1:35165587-35165606 | Msa0545220:CDS | 35.0% | |
| AAAGATTCCTTGCTCATTAC+TGG | + | chr4_1:35165671-35165690 | Msa0545220:intron | 35.0% | |
| AAACATTCCAGTAATGAGCA+AGG | - | chr4_1:35165681-35165700 | None:intergenic | 35.0% | |
| ACAAATGTTCTTGAAGGGAT+TGG | + | chr4_1:35165758-35165777 | Msa0545220:CDS | 35.0% | |
| ! | TTCCTTTGATAATTGACCAG+GGG | + | chr4_1:35165891-35165910 | Msa0545220:intron | 35.0% |
| !! | TTCTAGTTTACAGGTTAGGA+AGG | + | chr4_1:35165953-35165972 | Msa0545220:intron | 35.0% |
| !! | TGTTTTTGTTTCCCATATGC+AGG | + | chr4_1:35166208-35166227 | Msa0545220:intron | 35.0% |
| TTCAATTTCTGCCTGCATAT+GGG | - | chr4_1:35166222-35166241 | None:intergenic | 35.0% | |
| TTTCAATTTCTGCCTGCATA+TGG | - | chr4_1:35166223-35166242 | None:intergenic | 35.0% | |
| ATTTAACAATTGAGGAACGC+CGG | + | chr4_1:35166243-35166262 | Msa0545220:CDS | 35.0% | |
| ! | ACCTTATTTGTTCATCCAAC+CGG | - | chr4_1:35166265-35166284 | None:intergenic | 35.0% |
| CAACAAAGAAGAATCAGCAA+AGG | - | chr4_1:35166299-35166318 | None:intergenic | 35.0% | |
| ACGGCTAAATGACCAAAATA+TGG | - | chr4_1:35166456-35166475 | None:intergenic | 35.0% | |
| ! | AAGGTTTCTTTTTGTCACTG+AGG | + | chr4_1:35166534-35166553 | Msa0545220:intron | 35.0% |
| TAAGGTTTCATTCTGGCAAT+AGG | - | chr4_1:35166696-35166715 | None:intergenic | 35.0% | |
| ATAGCAATTAAAGCTCCACA+TGG | + | chr4_1:35166716-35166735 | Msa0545220:CDS | 35.0% | |
| TAAATTACCTCATCAGGATC+AGG | - | chr4_1:35166758-35166777 | None:intergenic | 35.0% | |
| TCCTGATGAGGTAATTTAAG+AGG | + | chr4_1:35166760-35166779 | Msa0545220:intron | 35.0% | |
| TCCTCTTAAATTACCTCATC+AGG | - | chr4_1:35166764-35166783 | None:intergenic | 35.0% | |
| ! | CAAATTCCCTTTTTCCCATT+AGG | + | chr4_1:35166831-35166850 | Msa0545220:intron | 35.0% |
| ACTTTGTTAACTTCTGGACT+GGG | - | chr4_1:35167157-35167176 | None:intergenic | 35.0% | |
| AACTTTGTTAACTTCTGGAC+TGG | - | chr4_1:35167158-35167177 | None:intergenic | 35.0% | |
| TTTCCTTCCCTTTATCTTCT+GGG | - | chr4_1:35167204-35167223 | None:intergenic | 35.0% | |
| ATTTCCTTCCCTTTATCTTC+TGG | - | chr4_1:35167205-35167224 | None:intergenic | 35.0% | |
| ! | TTGTTGGTAAGATCTGTACT+AGG | - | chr4_1:35167256-35167275 | None:intergenic | 35.0% |
| ! | AGATAACACGCTTCAGATTT+TGG | - | chr4_1:35167412-35167431 | None:intergenic | 35.0% |
| ATGTTAGCATAACCGATATG+TGG | + | chr4_1:35167574-35167593 | Msa0545220:CDS | 35.0% | |
| CTCCAGCTGTAAATATATCA+AGG | - | chr4_1:35167729-35167748 | None:intergenic | 35.0% | |
| TATTTACAGCTGGAGTAGAA+TGG | + | chr4_1:35167734-35167753 | Msa0545220:intron | 35.0% | |
| ! | TTTTGAACCTGAAGAGAAAG+TGG | + | chr4_1:35167891-35167910 | Msa0545220:three_prime_UTR | 35.0% |
| TGTACAATTAGCCATTTGAC+TGG | - | chr4_1:35168037-35168056 | None:intergenic | 35.0% | |
| ! | TCTAGAAGTACAAAGTCACT+TGG | - | chr4_1:35168077-35168096 | None:intergenic | 35.0% |
| AAGTGACTTTGTACTTCTAG+AGG | + | chr4_1:35168076-35168095 | Msa0545220:three_prime_UTR | 35.0% | |
| GCTCTGTTTGGTAAAAATAG+CGG | + | chr4_1:35168166-35168185 | Msa0545220:intron | 35.0% | |
| TAGTTACAGAGAATAGGAAG+TGG | - | chr4_1:35168975-35168994 | None:intergenic | 35.0% | |
| !! | CTGATAATTTTGCTGTGGTT+CGG | + | chr4_1:35169363-35169382 | Msa0545220:intron | 35.0% |
| TAAGCTATAAGCTCATTTGG+TGG | + | chr4_1:35169823-35169842 | Msa0545220:intron | 35.0% | |
| AAGCTATAAGCTCATTTGGT+GGG | + | chr4_1:35169824-35169843 | Msa0545220:intron | 35.0% | |
| ! | ATGATGGAGGGAATTTGGTT+CGG | - | chr4_1:35162120-35162139 | None:intergenic | 40.0% |
| !! | AGATGATGATGGAGGGAATT+TGG | - | chr4_1:35162125-35162144 | None:intergenic | 40.0% |
| !! | GAAGAAGAAGATGATGATGG+AGG | - | chr4_1:35162133-35162152 | None:intergenic | 40.0% |
| GGAGAAGAAGAAGATGATGA+TGG | - | chr4_1:35162136-35162155 | None:intergenic | 40.0% | |
| TTTGGAAAGTGGGAAAAAGC+GGG | - | chr4_1:35162182-35162201 | None:intergenic | 40.0% | |
| GTTTGGAAAGTGGGAAAAAG+CGG | - | chr4_1:35162183-35162202 | None:intergenic | 40.0% | |
| !! | CACAGGAGTTTTAACAACGA+TGG | - | chr4_1:35162447-35162466 | None:intergenic | 40.0% |
| TTAGGGCCTGTTTGGATAAA+TGG | + | chr4_1:35162914-35162933 | Msa0545220:intron | 40.0% | |
| TTGGTCTATTCTAGGTGGAA+AGG | + | chr4_1:35163261-35163280 | Msa0545220:intron | 40.0% | |
| !! | AGGAAATGGGTTACCATACT+TGG | + | chr4_1:35163438-35163457 | Msa0545220:intron | 40.0% |
| TAATACCCTTCGACCAAGTA+TGG | - | chr4_1:35163454-35163473 | None:intergenic | 40.0% | |
| AATTCATGGCCAGAGTGAAT+GGG | - | chr4_1:35164055-35164074 | None:intergenic | 40.0% | |
| GGCAAGAAACTTCCAATTCA+TGG | - | chr4_1:35164069-35164088 | None:intergenic | 40.0% | |
| TACTGAAAAACACCAGCTCA+TGG | - | chr4_1:35164090-35164109 | None:intergenic | 40.0% | |
| AGGGAAAGAAACTGCAATGT+GGG | + | chr4_1:35164178-35164197 | Msa0545220:intron | 40.0% | |
| AAAAGAGGAGAAGGGAAAGA+GGG | - | chr4_1:35164374-35164393 | None:intergenic | 40.0% | |
| AAAAAGAGGAGAAGGGAAAG+AGG | - | chr4_1:35164375-35164394 | None:intergenic | 40.0% | |
| CCGCTATTAAAAAGAGGAGA+AGG | - | chr4_1:35164383-35164402 | None:intergenic | 40.0% | |
| GGATAGCCGCTATTAAAAAG+AGG | - | chr4_1:35164389-35164408 | None:intergenic | 40.0% | |
| CACTATCCCAGTTGTACAAT+CGG | + | chr4_1:35164424-35164443 | Msa0545220:intron | 40.0% | |
| !! | TATTATGGATTAGTCTCCGC+AGG | - | chr4_1:35164581-35164600 | None:intergenic | 40.0% |
| !!! | GCTGATTTTGAAGCTGATTC+AGG | + | chr4_1:35164657-35164676 | Msa0545220:CDS | 40.0% |
| ! | TTGAAGCTGATTCAGGTGAT+AGG | + | chr4_1:35164664-35164683 | Msa0545220:CDS | 40.0% |
| !!! | GTTGCTTTTTGTCATCCTAG+AGG | - | chr4_1:35164769-35164788 | None:intergenic | 40.0% |
| TTCACCAATATTTGAGCCAG+GGG | - | chr4_1:35164808-35164827 | None:intergenic | 40.0% | |
| AATGAGCTGTCATATCGACA+TGG | - | chr4_1:35165042-35165061 | None:intergenic | 40.0% | |
| TGTCGATATGACAGCTCATT+AGG | + | chr4_1:35165042-35165061 | Msa0545220:CDS | 40.0% | |
| GGTGGAGGTTATTTGAAAAC+GGG | - | chr4_1:35165174-35165193 | None:intergenic | 40.0% | |
| !! | CATGAAAAAAAGGTTGGTGG+AGG | - | chr4_1:35165189-35165208 | None:intergenic | 40.0% |
| AGTTGAACCAATGTTTAGGG+GGG | + | chr4_1:35165386-35165405 | Msa0545220:intron | 40.0% | |
| TCCGAAATGCGTGAAAGTAA+TGG | + | chr4_1:35165442-35165461 | Msa0545220:intron | 40.0% | |
| CCCATTACTTTCACGCATTT+CGG | - | chr4_1:35165446-35165465 | None:intergenic | 40.0% | |
| CCGAAATGCGTGAAAGTAAT+GGG | + | chr4_1:35165443-35165462 | Msa0545220:intron | 40.0% | |
| CGAAATGCGTGAAAGTAATG+GGG | + | chr4_1:35165444-35165463 | Msa0545220:intron | 40.0% | |
| GAAATGCGTGAAAGTAATGG+GGG | + | chr4_1:35165445-35165464 | Msa0545220:intron | 40.0% | |
| TAATGCTGCTGACACATTAG+AGG | + | chr4_1:35165629-35165648 | Msa0545220:CDS | 40.0% | |
| TGAGCAAGGAATCTTTAGAC+AGG | - | chr4_1:35165667-35165686 | None:intergenic | 40.0% | |
| ! | CATGAAGCTTTTGTGTCTAC+AGG | + | chr4_1:35165709-35165728 | Msa0545220:intron | 40.0% |
| AGCTCAAGAACAGAATTCAG+TGG | + | chr4_1:35165795-35165814 | Msa0545220:CDS | 40.0% | |
| AGAACAGAATTCAGTGGAAG+TGG | + | chr4_1:35165801-35165820 | Msa0545220:intron | 40.0% | |
| GAACAGAATTCAGTGGAAGT+GGG | + | chr4_1:35165802-35165821 | Msa0545220:intron | 40.0% | |
| ! | TCCTTTGATAATTGACCAGG+GGG | + | chr4_1:35165892-35165911 | Msa0545220:intron | 40.0% |
| AGTTTACAGGTTAGGAAGGA+TGG | + | chr4_1:35165957-35165976 | Msa0545220:intron | 40.0% | |
| CATAGATAGGGAAACTAACC+TGG | - | chr4_1:35166585-35166604 | None:intergenic | 40.0% | |
| CAACAGCCTAATGGGAAAAA+GGG | - | chr4_1:35166840-35166859 | None:intergenic | 40.0% | |
| TCAACAGCCTAATGGGAAAA+AGG | - | chr4_1:35166841-35166860 | None:intergenic | 40.0% | |
| GGGATAATCAACAGCCTAAT+GGG | - | chr4_1:35166848-35166867 | None:intergenic | 40.0% | |
| ATTATCCCCAGAGAAGATAC+AGG | + | chr4_1:35166860-35166879 | Msa0545220:CDS | 40.0% | |
| ACTATCCTGTATCTTCTCTG+GGG | - | chr4_1:35166868-35166887 | None:intergenic | 40.0% | |
| GACTATCCTGTATCTTCTCT+GGG | - | chr4_1:35166869-35166888 | None:intergenic | 40.0% | |
| ! | ATAGTCCTGAGAAGCACAAT+GGG | + | chr4_1:35166883-35166902 | Msa0545220:CDS | 40.0% |
| GGGTCGTTTAGCTATTACAA+TGG | + | chr4_1:35166973-35166992 | Msa0545220:intron | 40.0% | |
| TCAAGCATCATCGCTTCATA+TGG | - | chr4_1:35167016-35167035 | None:intergenic | 40.0% | |
| TAACAAGGATCCATCAACTG+TGG | + | chr4_1:35167177-35167196 | Msa0545220:CDS | 40.0% | |
| ! | ATAGAAGTGCAGAGACAAGA+TGG | + | chr4_1:35167223-35167242 | Msa0545220:CDS | 40.0% |
| ATGCTTACAGCAACATCTGA+AGG | - | chr4_1:35167313-35167332 | None:intergenic | 40.0% | |
| AACAAATATCCCACAGACTG+AGG | - | chr4_1:35167338-35167357 | None:intergenic | 40.0% | |
| !! | CTTCAGATTTTGGTACTCTG+TGG | - | chr4_1:35167402-35167421 | None:intergenic | 40.0% |
| ACGTTCTGTTCTCCACATAT+CGG | - | chr4_1:35167589-35167608 | None:intergenic | 40.0% | |
| AACAAACACGCCAAAAGAGA+AGG | + | chr4_1:35167671-35167690 | Msa0545220:intron | 40.0% | |
| ACAAACACGCCAAAAGAGAA+GGG | + | chr4_1:35167672-35167691 | Msa0545220:intron | 40.0% | |
| ! | TTTTAGACTACGGCTCTGTT+TGG | + | chr4_1:35168154-35168173 | Msa0545220:intron | 40.0% |
| ! | TTGGTAGTCAGTATATACCC+AGG | + | chr4_1:35168570-35168589 | Msa0545220:intron | 40.0% |
| GTTAACTGCAGAAGTTTCCT+CGG | - | chr4_1:35169472-35169491 | None:intergenic | 40.0% | |
| GTTAACTGCAGAAGTTTCTG+CGG | - | chr4_1:35169447-35169466 | None:intergenic | 40.0% | |
| GCTGCATAACCATGAATTCT+GGG | - | chr4_1:35168953-35168972 | None:intergenic | 40.0% | |
| !! | AGAGGCACTGAATCTAATGA+AGG | + | chr4_1:35169140-35169159 | Msa0545220:intron | 40.0% |
| CGAACCACAGCAAAATTATC+AGG | - | chr4_1:35169365-35169384 | None:intergenic | 40.0% | |
| AACTGCAGAACCATGAATTC+TGG | + | chr4_1:35169405-35169424 | Msa0545220:intron | 40.0% | |
| ACTGCAGAACCATGAATTCT+GGG | + | chr4_1:35169406-35169425 | Msa0545220:intron | 40.0% | |
| GTTAACTGCAGAAGTTTCTG+CGG | + | chr4_1:35169447-35169466 | Msa0545220:intron | 40.0% | |
| GTTAACTGCAGAAGTTTCCT+CGG | + | chr4_1:35169472-35169491 | Msa0545220:intron | 40.0% | |
| CTATAAGCTCAAACGCTACT+TGG | + | chr4_1:35169684-35169703 | Msa0545220:intron | 40.0% | |
| TGAAGTAGAATTTCGCTCTC+AGG | + | chr4_1:35169920-35169939 | Msa0545220:three_prime_UTR | 40.0% | |
| GGTTCGGATATTGATGTGGA+GGG | - | chr4_1:35162104-35162123 | None:intergenic | 45.0% | |
| ! | TGGTTCGGATATTGATGTGG+AGG | - | chr4_1:35162105-35162124 | None:intergenic | 45.0% |
| AGAGAAAGGGAAGAGGTAGA+GGG | - | chr4_1:35162157-35162176 | None:intergenic | 45.0% | |
| GAAAAAGCGGGAGAGAGAAA+GGG | - | chr4_1:35162170-35162189 | None:intergenic | 45.0% | |
| GAGGTTTCATGGAGGAGAAA+GGG | - | chr4_1:35162352-35162371 | None:intergenic | 45.0% | |
| CAGTTTCGAGGTCTTGATTC+CGG | - | chr4_1:35162421-35162440 | None:intergenic | 45.0% | |
| TGTTAGTGTCTGACACGTGT+CGG | - | chr4_1:35162739-35162758 | None:intergenic | 45.0% | |
| !! | TATGAGCTTTAGGGCCTGTT+TGG | + | chr4_1:35162906-35162925 | Msa0545220:intron | 45.0% |
| CTAAAGACTAAGGGCCAGTT+TGG | - | chr4_1:35163146-35163165 | None:intergenic | 45.0% | |
| ! | CAAACTGGCCCTTAGTCTTT+AGG | + | chr4_1:35163144-35163163 | Msa0545220:intron | 45.0% |
| GAGAGGATGTGATTGTAAGC+TGG | + | chr4_1:35163198-35163217 | Msa0545220:intron | 45.0% | |
| GTAAGCTGGTCAATTCTAGG+TGG | + | chr4_1:35163212-35163231 | Msa0545220:intron | 45.0% | |
| ATGAGCTTACTTCTTCTGCC+TGG | + | chr4_1:35163354-35163373 | Msa0545220:intron | 45.0% | |
| GGTTACCATACTTGGTCGAA+GGG | + | chr4_1:35163446-35163465 | Msa0545220:intron | 45.0% | |
| GACGCTAAATGCAAATGCAG+CGG | + | chr4_1:35163969-35163988 | Msa0545220:intron | 45.0% | |
| GAAATCGAGGCTGCATTTCA+TGG | + | chr4_1:35163991-35164010 | Msa0545220:intron | 45.0% | |
| CAATTCATGGCCAGAGTGAA+TGG | - | chr4_1:35164056-35164075 | None:intergenic | 45.0% | |
| CATTCACTCTGGCCATGAAT+TGG | + | chr4_1:35164054-35164073 | Msa0545220:intron | 45.0% | |
| GAGGGAAAGAAACTGCAATG+TGG | + | chr4_1:35164177-35164196 | Msa0545220:intron | 45.0% | |
| GGGAAAGAAACTGCAATGTG+GGG | + | chr4_1:35164179-35164198 | Msa0545220:intron | 45.0% | |
| AGGGGTAGAAGAAGTGAGAT+CGG | - | chr4_1:35164355-35164374 | None:intergenic | 45.0% | |
| AAAGAGGAGAAGGGAAAGAG+GGG | - | chr4_1:35164373-35164392 | None:intergenic | 45.0% | |
| GAGCAACCGATTGTACAACT+GGG | - | chr4_1:35164433-35164452 | None:intergenic | 45.0% | |
| AGAGCAACCGATTGTACAAC+TGG | - | chr4_1:35164434-35164453 | None:intergenic | 45.0% | |
| AGGCGTCTGAACAGAACTAT+TGG | - | chr4_1:35164715-35164734 | None:intergenic | 45.0% | |
| CAAACCCCTGGCTCAAATAT+TGG | + | chr4_1:35164801-35164820 | Msa0545220:CDS | 45.0% | |
| AATTTGGCAGGTTCTCCTTC+AGG | + | chr4_1:35164994-35165013 | Msa0545220:intron | 45.0% | |
| GGGGTGAGATTATTTCCTGA+AGG | - | chr4_1:35165012-35165031 | None:intergenic | 45.0% | |
| ACTTAAACCAGAGTTGAGGG+AGG | - | chr4_1:35165228-35165247 | None:intergenic | 45.0% | |
| GTTGAACCAATGTTTAGGGG+GGG | + | chr4_1:35165387-35165406 | Msa0545220:intron | 45.0% | |
| TTGAACCAATGTTTAGGGGG+GGG | + | chr4_1:35165388-35165407 | Msa0545220:intron | 45.0% | |
| TTTAACCCCCCCCTAAACAT+TGG | - | chr4_1:35165396-35165415 | None:intergenic | 45.0% | |
| ATGTTTAGGGGGGGGTTAAA+TGG | + | chr4_1:35165396-35165415 | Msa0545220:intron | 45.0% | |
| GGGGGTTAAATGGCTAAAAC+AGG | + | chr4_1:35165406-35165425 | Msa0545220:intron | 45.0% | |
| TGTGTCTACAGGTGCAAAAG+AGG | + | chr4_1:35165720-35165739 | Msa0545220:intron | 45.0% | |
| GGCTGGATGTTTCAAAACCA+GGG | + | chr4_1:35165913-35165932 | Msa0545220:CDS | 45.0% | |
| GCTGGATGTTTCAAAACCAG+GGG | + | chr4_1:35165914-35165933 | Msa0545220:CDS | 45.0% | |
| GCCGGTTGGATGAACAAATA+AGG | + | chr4_1:35166261-35166280 | Msa0545220:CDS | 45.0% | |
| GGGAGATGCAAGAAAGACTA+CGG | + | chr4_1:35166379-35166398 | Msa0545220:intron | 45.0% | |
| ACTTCCAAAGTGGTACCATG+TGG | - | chr4_1:35166734-35166753 | None:intergenic | 45.0% | |
| AGGATCAGGTACTTCCAAAG+TGG | - | chr4_1:35166744-35166763 | None:intergenic | 45.0% | |
| GGGGATAATCAACAGCCTAA+TGG | - | chr4_1:35166849-35166868 | None:intergenic | 45.0% | |
| GGACTATCCTGTATCTTCTC+TGG | - | chr4_1:35166870-35166889 | None:intergenic | 45.0% | |
| ! | GATAGTCCTGAGAAGCACAA+TGG | + | chr4_1:35166882-35166901 | Msa0545220:CDS | 45.0% |
| GAGAAGTTTGAGGAGATCCA+CGG | + | chr4_1:35167106-35167125 | Msa0545220:CDS | 45.0% | |
| ! | TTCTGGACTGGGTGGAAATT+TGG | - | chr4_1:35167146-35167165 | None:intergenic | 45.0% |
| ! | TTGTTAACTTCTGGACTGGG+TGG | - | chr4_1:35167154-35167173 | None:intergenic | 45.0% |
| ACTGTGGTCCCAGAAGATAA+AGG | + | chr4_1:35167193-35167212 | Msa0545220:CDS | 45.0% | |
| CTGTGGTCCCAGAAGATAAA+GGG | + | chr4_1:35167194-35167213 | Msa0545220:CDS | 45.0% | |
| TGCAGAGACAAGATGGTGAA+GGG | + | chr4_1:35167230-35167249 | Msa0545220:CDS | 45.0% | |
| ACTCACGAAGTCGTGATTGT+TGG | - | chr4_1:35167272-35167291 | None:intergenic | 45.0% | |
| AACAATCACGACTTCGTGAG+TGG | + | chr4_1:35167271-35167290 | Msa0545220:CDS | 45.0% | |
| ACAATCACGACTTCGTGAGT+GGG | + | chr4_1:35167272-35167291 | Msa0545220:CDS | 45.0% | |
| TAAGCATCACCTCAGTCTGT+GGG | + | chr4_1:35167326-35167345 | Msa0545220:intron | 45.0% | |
| ! | TGCAGACTGATGCTGATTAC+TGG | + | chr4_1:35167535-35167554 | Msa0545220:intron | 45.0% |
| CAAACACGCCAAAAGAGAAG+GGG | + | chr4_1:35167673-35167692 | Msa0545220:intron | 45.0% | |
| ! | CTTCCAAACCCCTTCTCTTT+TGG | - | chr4_1:35167684-35167703 | None:intergenic | 45.0% |
| TGAGGCTTCATCCTACAGTA+GGG | - | chr4_1:35167861-35167880 | None:intergenic | 45.0% | |
| TTGAGGCTTCATCCTACAGT+AGG | - | chr4_1:35167862-35167881 | None:intergenic | 45.0% | |
| CTGTAGGATGAAGCCTCAAA+AGG | + | chr4_1:35167863-35167882 | Msa0545220:exon | 45.0% | |
| ! | AAGAACGCCACTTTCTCTTC+AGG | - | chr4_1:35167901-35167920 | None:intergenic | 45.0% |
| GGATGTCATAGGTTCTCAGT+TGG | - | chr4_1:35167927-35167946 | None:intergenic | 45.0% | |
| TCATCAAGAAGCTTGTCCTG+AGG | + | chr4_1:35168001-35168020 | Msa0545220:three_prime_UTR | 45.0% | |
| GAGTTGAATGGCCAGTCAAA+TGG | + | chr4_1:35168023-35168042 | Msa0545220:three_prime_UTR | 45.0% | |
| !! | TGGTGGGGCATTTTAGACTA+CGG | + | chr4_1:35168144-35168163 | Msa0545220:intron | 45.0% |
| TAACTGCCGCAGAAGTAAAC+CGG | + | chr4_1:35168848-35168867 | Msa0545220:intron | 45.0% | |
| GGCTGCATAACCATGAATTC+TGG | - | chr4_1:35168954-35168973 | None:intergenic | 45.0% | |
| AATGCTCAGATCTTGGACAG+AGG | + | chr4_1:35169122-35169141 | Msa0545220:intron | 45.0% | |
| TAACTGCCGCAGAAGTAAAC+CGG | - | chr4_1:35168848-35168867 | None:intergenic | 45.0% | |
| !!! | TTTTCTAAAATAAATTATAA+AGG | + | chr4_1:35169597-35169616 | Msa0545220:intron | 5.0% |
| !!! | TTTCTAAAATAAATTATAAA+GGG | + | chr4_1:35169598-35169617 | Msa0545220:intron | 5.0% |
| GAGAGAAAGGGAAGAGGTAG+AGG | - | chr4_1:35162158-35162177 | None:intergenic | 50.0% | |
| GGAAAAAGCGGGAGAGAGAA+AGG | - | chr4_1:35162171-35162190 | None:intergenic | 50.0% | |
| GTTGACGTTGCTGCATGATC+TGG | - | chr4_1:35162328-35162347 | None:intergenic | 50.0% | |
| GGAGGTTTCATGGAGGAGAA+AGG | - | chr4_1:35162353-35162372 | None:intergenic | 50.0% | |
| GAGAAAGGGAGGTTTCATGG+AGG | - | chr4_1:35162360-35162379 | None:intergenic | 50.0% | |
| GGAGAGAAAGGGAGGTTTCA+TGG | - | chr4_1:35162363-35162382 | None:intergenic | 50.0% | |
| TAATCTCCGGCGGAGAGAAA+GGG | - | chr4_1:35162374-35162393 | None:intergenic | 50.0% | |
| ATAATCTCCGGCGGAGAGAA+AGG | - | chr4_1:35162375-35162394 | None:intergenic | 50.0% | |
| TGCGAAGCGGTGATAATCTC+CGG | - | chr4_1:35162387-35162406 | None:intergenic | 50.0% | |
| TTTCGAGGTCTTGATTCCGG+CGG | - | chr4_1:35162418-35162437 | None:intergenic | 50.0% | |
| CAACGATGGCTTCAGTTTCG+AGG | - | chr4_1:35162433-35162452 | None:intergenic | 50.0% | |
| CGACATGTTAGTGTCGTGTC+AGG | + | chr4_1:35162807-35162826 | Msa0545220:intron | 50.0% | |
| GACTAAGGGCCAGTTTGGAT+TGG | - | chr4_1:35163141-35163160 | None:intergenic | 50.0% | |
| GGGTTACCATACTTGGTCGA+AGG | + | chr4_1:35163445-35163464 | Msa0545220:intron | 50.0% | |
| !! | TTGTGGCTTTGTGATACGGC+TGG | + | chr4_1:35163933-35163952 | Msa0545220:intron | 50.0% |
| TGCAAATGCAGCGGAAATCG+AGG | + | chr4_1:35163978-35163997 | Msa0545220:intron | 50.0% | |
| ATCGAGGCTGCATTTCATGG+TGG | + | chr4_1:35163994-35164013 | Msa0545220:intron | 50.0% | |
| CTGCACAAACCCATTCACTC+TGG | + | chr4_1:35164043-35164062 | Msa0545220:intron | 50.0% | |
| GGAAGTTTCTTGCCATGAGC+TGG | + | chr4_1:35164075-35164094 | Msa0545220:intron | 50.0% | |
| ! | ATAGGTAGAAAAGGGGGCGT+AGG | - | chr4_1:35164315-35164334 | None:intergenic | 50.0% |
| ATAGTGCTTGAGAGGAGAGC+GGG | - | chr4_1:35164410-35164429 | None:intergenic | 50.0% | |
| GATAGTGCTTGAGAGGAGAG+CGG | - | chr4_1:35164411-35164430 | None:intergenic | 50.0% | |
| CAACTGGGATAGTGCTTGAG+AGG | - | chr4_1:35164418-35164437 | None:intergenic | 50.0% | |
| ACGTTGTTGATCTCGGACAG+TGG | - | chr4_1:35164460-35164479 | None:intergenic | 50.0% | |
| TCAGGTGATAGGATGACTCC+TGG | + | chr4_1:35164675-35164694 | Msa0545220:CDS | 50.0% | |
| ! | AGAACTATTGGCTGCTGCAG+TGG | - | chr4_1:35164703-35164722 | None:intergenic | 50.0% |
| TCTGTTCAGACGCCTGTATC+TGG | + | chr4_1:35164720-35164739 | Msa0545220:CDS | 50.0% | |
| TCAGACGCCTGTATCTGGAA+AGG | + | chr4_1:35164725-35164744 | Msa0545220:CDS | 50.0% | |
| GGAAGGGAGGAAAATCCTCT+AGG | + | chr4_1:35164751-35164770 | Msa0545220:CDS | 50.0% | |
| AGAACTGGAACTCAAACCCC+TGG | + | chr4_1:35164789-35164808 | Msa0545220:CDS | 50.0% | |
| GGAAATAATCTCACCCCTGC+TGG | + | chr4_1:35165015-35165034 | Msa0545220:CDS | 50.0% | |
| ATATCGACATGGACCAGCAG+GGG | - | chr4_1:35165031-35165050 | None:intergenic | 50.0% | |
| CATATCGACATGGACCAGCA+GGG | - | chr4_1:35165032-35165051 | None:intergenic | 50.0% | |
| TCATATCGACATGGACCAGC+AGG | - | chr4_1:35165033-35165052 | None:intergenic | 50.0% | |
| CACTTAACCTCCCTCAACTC+TGG | + | chr4_1:35165218-35165237 | Msa0545220:intron | 50.0% | |
| GTCTACAGGTGCAAAAGAGG+AGG | + | chr4_1:35165723-35165742 | Msa0545220:intron | 50.0% | |
| GCCCCCTGGTCAATTATCAA+AGG | - | chr4_1:35165896-35165915 | None:intergenic | 50.0% | |
| ! | TTGATAATTGACCAGGGGGC+TGG | + | chr4_1:35165896-35165915 | Msa0545220:intron | 50.0% |
| !!! | TTTTGAAACATCCAGCCCCC+TGG | - | chr4_1:35165910-35165929 | None:intergenic | 50.0% |
| GGGCTGGATGTTTCAAAACC+AGG | + | chr4_1:35165912-35165931 | Msa0545220:CDS | 50.0% | |
| GGATGTTTCAAAACCAGGGG+AGG | + | chr4_1:35165917-35165936 | Msa0545220:CDS | 50.0% | |
| AACAATTGAGGAACGCCGGT+TGG | + | chr4_1:35166247-35166266 | Msa0545220:CDS | 50.0% | |
| AAAGAACTTGCCCTGCTTCC+AGG | + | chr4_1:35166564-35166583 | Msa0545220:CDS | 50.0% | |
| GGGAAACTAACCTGGAAGCA+GGG | - | chr4_1:35166577-35166596 | None:intergenic | 50.0% | |
| AGGGAAACTAACCTGGAAGC+AGG | - | chr4_1:35166578-35166597 | None:intergenic | 50.0% | |
| AGCTCCACATGGTACCACTT+TGG | + | chr4_1:35166727-35166746 | Msa0545220:CDS | 50.0% | |
| !! | GGAAGTACCTGATCCTGATG+AGG | + | chr4_1:35166748-35166767 | Msa0545220:CDS | 50.0% |
| TGGATGCAACATCAACACCG+TGG | - | chr4_1:35167126-35167145 | None:intergenic | 50.0% | |
| !! | TCTTCTGGGACCACAGTTGA+TGG | - | chr4_1:35167190-35167209 | None:intergenic | 50.0% |
| GGTCCCAGAAGATAAAGGGA+AGG | + | chr4_1:35167198-35167217 | Msa0545220:CDS | 50.0% | |
| GTGCAGAGACAAGATGGTGA+AGG | + | chr4_1:35167229-35167248 | Msa0545220:CDS | 50.0% | |
| GTAAGCATCACCTCAGTCTG+TGG | + | chr4_1:35167325-35167344 | Msa0545220:intron | 50.0% | |
| ! | GGAGACTAAGGTGTCTAGAG+AGG | - | chr4_1:35167614-35167633 | None:intergenic | 50.0% |
| ACGCCAAAAGAGAAGGGGTT+TGG | + | chr4_1:35167678-35167697 | Msa0545220:intron | 50.0% | |
| ACAGTAGGGTTGGATGCAGA+AGG | - | chr4_1:35167847-35167866 | None:intergenic | 50.0% | |
| TCTGCATCCAACCCTACTGT+AGG | + | chr4_1:35167847-35167866 | Msa0545220:CDS | 50.0% | |
| GCTTCATCCTACAGTAGGGT+TGG | - | chr4_1:35167857-35167876 | None:intergenic | 50.0% | |
| AACCTTCAATCCAACCTCGC+AGG | - | chr4_1:35167957-35167976 | None:intergenic | 50.0% | |
| GCTTGTCCTGAGGAGTTGAA+TGG | + | chr4_1:35168011-35168030 | Msa0545220:three_prime_UTR | 50.0% | |
| ACATACACGTCGCGCTAAGT+AGG | - | chr4_1:35169864-35169883 | None:intergenic | 50.0% | |
| GCGCGACGTGTATGTTTGAA+AGG | + | chr4_1:35169869-35169888 | Msa0545220:three_prime_UTR | 50.0% | |
| TGCCGGCGATGGAAGGAAAT+GGG | - | chr4_1:35162259-35162278 | None:intergenic | 55.0% | |
| CGTTGCTGCATGATCTGGTC+CGG | - | chr4_1:35162323-35162342 | None:intergenic | 55.0% | |
| AAACCTCCCTTTCTCTCCGC+CGG | + | chr4_1:35162365-35162384 | Msa0545220:CDS | 55.0% | |
| GAAGCGGTGATAATCTCCGG+CGG | - | chr4_1:35162384-35162403 | None:intergenic | 55.0% | |
| !! | TGGCTTTGTGATACGGCTGG+AGG | + | chr4_1:35163936-35163955 | Msa0545220:intron | 55.0% |
| TGCATTTAGCGTCGCAGCCA+AGG | - | chr4_1:35163962-35163981 | None:intergenic | 55.0% | |
| GAGGCTGCATTTCATGGTGG+CGG | + | chr4_1:35163997-35164016 | Msa0545220:intron | 55.0% | |
| ! | GTAGAAAAGGGGGCGTAGGT+AGG | - | chr4_1:35164311-35164330 | None:intergenic | 55.0% |
| GACGCCTGTATCTGGAAAGG+CGG | + | chr4_1:35164728-35164747 | Msa0545220:CDS | 55.0% | |
| ACGCCTGTATCTGGAAAGGC+GGG | + | chr4_1:35164729-35164748 | Msa0545220:CDS | 55.0% | |
| TTCCCCGCCTTTCCAGATAC+AGG | - | chr4_1:35164735-35164754 | None:intergenic | 55.0% | |
| TGTATCTGGAAAGGCGGGGA+AGG | + | chr4_1:35164734-35164753 | Msa0545220:CDS | 55.0% | |
| GTATCTGGAAAGGCGGGGAA+GGG | + | chr4_1:35164735-35164754 | Msa0545220:CDS | 55.0% | |
| AAACTATCATCGGCCTCCCC+TGG | - | chr4_1:35165933-35165952 | None:intergenic | 55.0% | |
| TTGGGCCCATTGTGCTTCTC+AGG | - | chr4_1:35166891-35166910 | None:intergenic | 55.0% | |
| CAGGTCTGGGTGGATGTCAT+AGG | - | chr4_1:35167938-35167957 | None:intergenic | 55.0% | |
| CAATCCAACCTCGCAGGTCT+GGG | - | chr4_1:35167951-35167970 | None:intergenic | 55.0% | |
| TCAATCCAACCTCGCAGGTC+TGG | - | chr4_1:35167952-35167971 | None:intergenic | 55.0% | |
| GACCTGCGAGGTTGGATTGA+AGG | + | chr4_1:35167952-35167971 | Msa0545220:three_prime_UTR | 55.0% | |
| ! | GACTGGCCATTCAACTCCTC+AGG | - | chr4_1:35168020-35168039 | None:intergenic | 55.0% |
| TGCGGCAGTTAACTGCCGAA+GGG | - | chr4_1:35169520-35169539 | None:intergenic | 55.0% | |
| ! | CTGCAGCCGGTTTACTTCTG+CGG | - | chr4_1:35169502-35169521 | None:intergenic | 55.0% |
| ! | CTGCAGCCGGTTTACTTCTG+CGG | + | chr4_1:35169502-35169521 | Msa0545220:intron | 55.0% |
| TGCGGCAGTTAACTGCCGAA+GGG | + | chr4_1:35169520-35169539 | Msa0545220:intron | 55.0% | |
| CGCGCTAAGTAGGCTCTGTT+TGG | - | chr4_1:35169854-35169873 | None:intergenic | 55.0% | |
| GCGGGAGAGAGAAAGGGAAG+AGG | - | chr4_1:35162164-35162183 | None:intergenic | 60.0% | |
| CCGGCGATGGAAGGAAATGG+GGG | - | chr4_1:35162257-35162276 | None:intergenic | 60.0% | |
| CCCCCATTTCCTTCCATCGC+CGG | + | chr4_1:35162254-35162273 | Msa0545220:five_prime_UTR | 60.0% | |
| GCCGGCGATGGAAGGAAATG+GGG | - | chr4_1:35162258-35162277 | None:intergenic | 60.0% | |
| CTGCCGGCGATGGAAGGAAA+TGG | - | chr4_1:35162260-35162279 | None:intergenic | 60.0% | |
| CATTTCCTTCCATCGCCGGC+AGG | + | chr4_1:35162258-35162277 | Msa0545220:five_prime_UTR | 60.0% | |
| TCTTGATTCCGGCGGTGGTC+AGG | - | chr4_1:35162410-35162429 | None:intergenic | 60.0% | |
| TGTGATACGGCTGGAGGCCT+TGG | + | chr4_1:35163942-35163961 | Msa0545220:intron | 60.0% | |
| !! | TCATGGTGGCGGCCGAAACA+AGG | + | chr4_1:35164008-35164027 | Msa0545220:intron | 60.0% |
| !! | CATGGTGGCGGCCGAAACAA+GGG | + | chr4_1:35164009-35164028 | Msa0545220:intron | 60.0% |
| TAGTCTCCGCAGGTGCTCGT+GGG | - | chr4_1:35164571-35164590 | None:intergenic | 60.0% | |
| TTAGTCTCCGCAGGTGCTCG+TGG | - | chr4_1:35164572-35164591 | None:intergenic | 60.0% | |
| TTGGCTGCTGCAGTGGATCC+AGG | - | chr4_1:35164696-35164715 | None:intergenic | 60.0% | |
| CGCCTGTATCTGGAAAGGCG+GGG | + | chr4_1:35164730-35164749 | Msa0545220:CDS | 60.0% | |
| GCGGCAGTTAACTGCCGAAG+GGG | - | chr4_1:35169521-35169540 | None:intergenic | 60.0% | |
| CTGCGGCAGTTAACTGCCGA+AGG | - | chr4_1:35169519-35169538 | None:intergenic | 60.0% | |
| CCTCGGCAGTTAACTGCAGC+CGG | - | chr4_1:35169489-35169508 | None:intergenic | 60.0% | |
| CCTCGGCAGTTAACTGCAGC+CGG | + | chr4_1:35169489-35169508 | Msa0545220:intron | 60.0% | |
| CTGCGGCAGTTAACTGCCGA+AGG | + | chr4_1:35169519-35169538 | Msa0545220:intron | 60.0% | |
| GCGGCAGTTAACTGCCGAAG+GGG | + | chr4_1:35169521-35169540 | Msa0545220:intron | 60.0% | |
| TTCGCTCTCAGGCAAAGCGC+TGG | + | chr4_1:35169931-35169950 | Msa0545220:three_prime_UTR | 60.0% | |
| TTCCTTCCATCGCCGGCAGG+TGG | + | chr4_1:35162261-35162280 | Msa0545220:five_prime_UTR | 65.0% | |
| ATCCACCTGCCGGCGATGGA+AGG | - | chr4_1:35162266-35162285 | None:intergenic | 65.0% | |
| CATCGCCGGCAGGTGGATGT+CGG | + | chr4_1:35162268-35162287 | Msa0545220:exon | 65.0% | |
| ATCGCCGGCAGGTGGATGTC+GGG | + | chr4_1:35162269-35162288 | Msa0545220:exon | 65.0% | |
| CTGCATGATCTGGTCCGGCG+CGG | - | chr4_1:35162318-35162337 | None:intergenic | 65.0% | |
| TCTCCGGCGGAGAGAAAGGG+AGG | - | chr4_1:35162371-35162390 | None:intergenic | 65.0% | |
| CGAGGTCTTGATTCCGGCGG+TGG | - | chr4_1:35162415-35162434 | None:intergenic | 65.0% | |
| AGGTGCTCGTGGGGATACCG+TGG | - | chr4_1:35164561-35164580 | None:intergenic | 65.0% | |
| GGTATCCCCACGAGCACCTG+CGG | + | chr4_1:35164562-35164581 | Msa0545220:intron | 65.0% | |
| AGTCTCCGCAGGTGCTCGTG+GGG | - | chr4_1:35164570-35164589 | None:intergenic | 65.0% | |
| TCTGGAAAGGCGGGGAAGGG+AGG | + | chr4_1:35164738-35164757 | Msa0545220:CDS | 65.0% | |
| GACATCCACCCAGACCTGCG+AGG | + | chr4_1:35167940-35167959 | Msa0545220:three_prime_UTR | 65.0% | |
| TCCACCCAGACCTGCGAGGT+TGG | + | chr4_1:35167944-35167963 | Msa0545220:three_prime_UTR | 65.0% | |
| TCCAACCTCGCAGGTCTGGG+TGG | - | chr4_1:35167948-35167967 | None:intergenic | 65.0% | |
| CCGGCTGCAGTTAACTGCCG+AGG | + | chr4_1:35168867-35168886 | Msa0545220:intron | 65.0% | |
| CCGGCTGCAGTTAACTGCCG+AGG | - | chr4_1:35168867-35168886 | None:intergenic | 65.0% | |
| CGACATCCACCTGCCGGCGA+TGG | - | chr4_1:35162270-35162289 | None:intergenic | 70.0% | |
| GGTGCCCGACATCCACCTGC+CGG | - | chr4_1:35162276-35162295 | None:intergenic | 70.0% | |
| CATGATCTGGTCCGGCGCGG+CGG | - | chr4_1:35162315-35162334 | None:intergenic | 70.0% | |
| GGCGGTGGTCAGGTGCGAAG+CGG | - | chr4_1:35162400-35162419 | None:intergenic | 70.0% | |
| GCTTCGCACCTGACCACCGC+CGG | + | chr4_1:35162399-35162418 | Msa0545220:CDS | 70.0% | |
| !! | GGCGGTGGCGGGAGGAGTTC+GGG | - | chr4_1:35162297-35162316 | None:intergenic | 75.0% |
| !! | CGGCGGTGGCGGGAGGAGTT+CGG | - | chr4_1:35162298-35162317 | None:intergenic | 75.0% |
| ! | GATCTGGTCCGGCGCGGCGG+TGG | - | chr4_1:35162312-35162331 | None:intergenic | 80.0% |
| ! | TCCTCCCGCCACCGCCGCGC+CGG | + | chr4_1:35162301-35162320 | Msa0545220:CDS | 85.0% |
| ! | TGGTCCGGCGCGGCGGTGGC+GGG | - | chr4_1:35162308-35162327 | None:intergenic | 85.0% |
| ! | CTGGTCCGGCGCGGCGGTGG+CGG | - | chr4_1:35162309-35162328 | None:intergenic | 85.0% |
| !!! | TCCGGCGCGGCGGTGGCGGG+AGG | - | chr4_1:35162305-35162324 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 35162096 | 35170028 | 35162096 | ID=Msa0545220;Name=Msa0545220 |
| chr4_1 | mRNA | 35162096 | 35170028 | 35162096 | ID=Msa0545220-mRNA-1;Parent=Msa0545220;Name=Msa0545220-mRNA-1;_AED=0.13;_eAED=0.13;_QI=168|1|1|1|0.86|0.75|16|455|460 |
| chr4_1 | exon | 35162096 | 35162214 | 35162096 | ID=Msa0545220-mRNA-1:exon:8866;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35162235 | 35162463 | 35162235 | ID=Msa0545220-mRNA-1:exon:8867;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35164633 | 35164822 | 35164633 | ID=Msa0545220-mRNA-1:exon:8868;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35165004 | 35165063 | 35165004 | ID=Msa0545220-mRNA-1:exon:8869;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35165565 | 35165650 | 35165565 | ID=Msa0545220-mRNA-1:exon:8870;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35165731 | 35165819 | 35165731 | ID=Msa0545220-mRNA-1:exon:8871;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35165911 | 35165965 | 35165911 | ID=Msa0545220-mRNA-1:exon:8872;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35166230 | 35166282 | 35166230 | ID=Msa0545220-mRNA-1:exon:8873;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35166380 | 35166430 | 35166380 | ID=Msa0545220-mRNA-1:exon:8874;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35166537 | 35166585 | 35166537 | ID=Msa0545220-mRNA-1:exon:8875;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35166704 | 35166769 | 35166704 | ID=Msa0545220-mRNA-1:exon:8876;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35166853 | 35166929 | 35166853 | ID=Msa0545220-mRNA-1:exon:8877;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35167096 | 35167324 | 35167096 | ID=Msa0545220-mRNA-1:exon:8878;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35167540 | 35167606 | 35167540 | ID=Msa0545220-mRNA-1:exon:8879;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35167743 | 35168160 | 35167743 | ID=Msa0545220-mRNA-1:exon:8880;Parent=Msa0545220-mRNA-1 |
| chr4_1 | exon | 35169861 | 35170028 | 35169861 | ID=Msa0545220-mRNA-1:exon:8881;Parent=Msa0545220-mRNA-1 |
| chr4_1 | five_prime_UTR | 35162096 | 35162214 | 35162096 | ID=Msa0545220-mRNA-1:five_prime_utr;Parent=Msa0545220-mRNA-1 |
| chr4_1 | five_prime_UTR | 35162235 | 35162283 | 35162235 | ID=Msa0545220-mRNA-1:five_prime_utr;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35162284 | 35162463 | 35162284 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35164633 | 35164822 | 35164633 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35165004 | 35165063 | 35165004 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35165565 | 35165650 | 35165565 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35165731 | 35165819 | 35165731 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35165911 | 35165965 | 35165911 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35166230 | 35166282 | 35166230 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35166380 | 35166430 | 35166380 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35166537 | 35166585 | 35166537 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35166704 | 35166769 | 35166704 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35166853 | 35166929 | 35166853 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35167096 | 35167324 | 35167096 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35167540 | 35167606 | 35167540 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | CDS | 35167743 | 35167873 | 35167743 | ID=Msa0545220-mRNA-1:cds;Parent=Msa0545220-mRNA-1 |
| chr4_1 | three_prime_UTR | 35167874 | 35168160 | 35167874 | ID=Msa0545220-mRNA-1:three_prime_utr;Parent=Msa0545220-mRNA-1 |
| chr4_1 | three_prime_UTR | 35169861 | 35170028 | 35169861 | ID=Msa0545220-mRNA-1:three_prime_utr;Parent=Msa0545220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
