Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546440 | XP_003606331.2 | 96.382 | 304 | 10 | 1 | 228 | 531 | 33 | 335 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546440 | sp|Q0V7X4|FIT_ARATH | 52.077 | 313 | 122 | 10 | 228 | 529 | 22 | 317 | 5.36e-87 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546440 | G7JN98 | 96.382 | 304 | 10 | 1 | 228 | 531 | 33 | 335 | 0.0 | 595 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0546440 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546440 | MtrunA17_Chr4g0028071 | 96.382 | 304 | 10 | 1 | 228 | 531 | 33 | 335 | 0.0 | 595 |
| Msa0546440 | MtrunA17_Chr2g0320291 | 64.194 | 310 | 88 | 9 | 228 | 529 | 19 | 313 | 2.65e-121 | 358 |
| Msa0546440 | MtrunA17_Chr6g0485871 | 48.780 | 246 | 78 | 9 | 1 | 227 | 1 | 217 | 3.08e-56 | 191 |
| Msa0546440 | MtrunA17_Chr3g0125741 | 66.176 | 68 | 22 | 1 | 102 | 169 | 8 | 74 | 1.15e-24 | 98.6 |
| Msa0546440 | MtrunA17_Chr8g0365711 | 29.897 | 194 | 109 | 5 | 336 | 515 | 235 | 415 | 1.43e-18 | 88.2 |
| Msa0546440 | MtrunA17_Chr2g0298751 | 32.716 | 162 | 96 | 4 | 344 | 493 | 51 | 211 | 2.25e-16 | 79.0 |
| Msa0546440 | MtrunA17_Chr1g0211081 | 31.034 | 145 | 73 | 3 | 339 | 456 | 311 | 455 | 1.47e-15 | 79.3 |
| Msa0546440 | MtrunA17_Chr8g0366751 | 30.000 | 160 | 101 | 4 | 349 | 498 | 466 | 624 | 3.03e-15 | 79.0 |
| Msa0546440 | MtrunA17_Chr4g0048851 | 32.278 | 158 | 90 | 5 | 344 | 496 | 46 | 191 | 2.23e-14 | 72.4 |
| Msa0546440 | MtrunA17_Chr3g0131691 | 36.441 | 118 | 69 | 1 | 300 | 411 | 247 | 364 | 3.42e-14 | 75.1 |
| Msa0546440 | MtrunA17_Chr5g0411341 | 31.333 | 150 | 92 | 4 | 349 | 488 | 497 | 645 | 8.26e-14 | 74.3 |
| Msa0546440 | MtrunA17_Chr7g0252041 | 53.448 | 58 | 27 | 0 | 344 | 401 | 285 | 342 | 2.19e-12 | 69.3 |
| Msa0546440 | MtrunA17_Chr7g0275821 | 51.923 | 52 | 25 | 0 | 349 | 400 | 256 | 307 | 3.82e-12 | 68.2 |
| Msa0546440 | MtrunA17_Chr4g0054571 | 28.571 | 133 | 89 | 2 | 347 | 473 | 152 | 284 | 8.60e-12 | 66.6 |
| Msa0546440 | MtrunA17_Chr8g0346161 | 28.218 | 202 | 108 | 8 | 309 | 488 | 247 | 433 | 9.62e-12 | 67.4 |
| Msa0546440 | MtrunA17_Chr7g0225901 | 25.551 | 227 | 128 | 9 | 274 | 483 | 23 | 225 | 2.28e-11 | 64.3 |
| Msa0546440 | MtrunA17_Chr7g0260841 | 23.592 | 284 | 163 | 10 | 251 | 511 | 241 | 493 | 6.10e-11 | 64.7 |
| Msa0546440 | MtrunA17_Chr5g0400671 | 32.278 | 158 | 86 | 5 | 347 | 500 | 156 | 296 | 8.38e-11 | 63.5 |
| Msa0546440 | MtrunA17_Chr2g0280161 | 28.682 | 129 | 88 | 3 | 347 | 473 | 179 | 305 | 8.50e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546440 | AT2G28160.1 | 52.077 | 313 | 122 | 10 | 228 | 529 | 22 | 317 | 5.45e-88 | 274 |
| Msa0546440 | AT2G28160.2 | 51.140 | 307 | 122 | 10 | 228 | 523 | 22 | 311 | 9.07e-84 | 263 |
| Msa0546440 | AT5G57150.2 | 39.490 | 157 | 85 | 4 | 344 | 492 | 54 | 208 | 2.34e-23 | 99.0 |
| Msa0546440 | AT5G57150.3 | 39.490 | 157 | 85 | 4 | 344 | 492 | 54 | 208 | 2.35e-23 | 99.0 |
| Msa0546440 | AT5G57150.5 | 39.490 | 157 | 85 | 4 | 344 | 492 | 53 | 207 | 2.64e-23 | 99.0 |
| Msa0546440 | AT5G57150.1 | 39.490 | 157 | 85 | 4 | 344 | 492 | 53 | 207 | 3.45e-23 | 99.0 |
| Msa0546440 | AT5G57150.4 | 39.490 | 157 | 85 | 4 | 344 | 492 | 54 | 208 | 7.81e-23 | 98.6 |
| Msa0546440 | AT4G29930.6 | 34.177 | 158 | 95 | 3 | 344 | 500 | 53 | 202 | 2.12e-20 | 90.5 |
| Msa0546440 | AT4G29930.5 | 34.839 | 155 | 91 | 3 | 344 | 498 | 53 | 197 | 5.59e-20 | 89.7 |
| Msa0546440 | AT2G16910.1 | 35.838 | 173 | 85 | 5 | 343 | 490 | 312 | 483 | 5.64e-20 | 94.0 |
| Msa0546440 | AT4G29930.2 | 33.758 | 157 | 94 | 3 | 344 | 500 | 53 | 199 | 1.51e-19 | 88.2 |
| Msa0546440 | AT4G29930.3 | 34.066 | 182 | 85 | 5 | 344 | 498 | 53 | 226 | 7.14e-19 | 87.0 |
| Msa0546440 | AT4G29930.7 | 34.066 | 182 | 85 | 5 | 344 | 498 | 53 | 226 | 7.14e-19 | 87.0 |
| Msa0546440 | AT4G29930.1 | 33.152 | 184 | 88 | 5 | 344 | 500 | 53 | 228 | 2.73e-18 | 85.1 |
| Msa0546440 | AT4G29930.4 | 42.202 | 109 | 45 | 3 | 344 | 441 | 53 | 154 | 1.04e-16 | 79.0 |
| Msa0546440 | AT1G10610.3 | 34.167 | 120 | 76 | 2 | 339 | 455 | 161 | 280 | 3.26e-15 | 77.4 |
| Msa0546440 | AT1G10610.2 | 34.167 | 120 | 76 | 2 | 339 | 455 | 228 | 347 | 4.52e-15 | 77.8 |
| Msa0546440 | AT1G10610.1 | 34.167 | 120 | 76 | 2 | 339 | 455 | 258 | 377 | 5.03e-15 | 77.8 |
| Msa0546440 | AT2G46510.1 | 40.000 | 90 | 52 | 1 | 349 | 438 | 399 | 486 | 2.24e-14 | 76.3 |
| Msa0546440 | AT1G01260.1 | 29.493 | 217 | 104 | 6 | 286 | 494 | 383 | 558 | 2.57e-14 | 76.3 |
| Msa0546440 | AT1G01260.2 | 29.493 | 217 | 104 | 6 | 286 | 494 | 383 | 558 | 2.57e-14 | 76.3 |
| Msa0546440 | AT1G01260.3 | 29.493 | 217 | 104 | 6 | 286 | 494 | 383 | 558 | 2.57e-14 | 76.3 |
| Msa0546440 | AT4G17880.1 | 30.000 | 140 | 96 | 2 | 349 | 488 | 420 | 557 | 6.56e-14 | 74.7 |
| Msa0546440 | AT5G46760.1 | 28.472 | 144 | 97 | 4 | 349 | 488 | 419 | 560 | 2.25e-13 | 73.2 |
| Msa0546440 | AT1G12860.2 | 51.724 | 58 | 28 | 0 | 344 | 401 | 266 | 323 | 1.73e-12 | 69.7 |
| Msa0546440 | AT1G12860.1 | 51.724 | 58 | 28 | 0 | 344 | 401 | 266 | 323 | 2.05e-12 | 69.7 |
| Msa0546440 | AT4G21330.1 | 26.178 | 191 | 133 | 3 | 312 | 500 | 4 | 188 | 3.60e-12 | 66.2 |
| Msa0546440 | AT3G26744.6 | 51.724 | 58 | 28 | 0 | 344 | 401 | 306 | 363 | 4.06e-12 | 68.9 |
| Msa0546440 | AT3G26744.1 | 51.724 | 58 | 28 | 0 | 344 | 401 | 306 | 363 | 4.06e-12 | 68.9 |
| Msa0546440 | AT3G26744.4 | 51.724 | 58 | 28 | 0 | 344 | 401 | 306 | 363 | 4.06e-12 | 68.9 |
| Msa0546440 | AT3G26744.2 | 51.724 | 58 | 28 | 0 | 344 | 401 | 306 | 363 | 4.06e-12 | 68.9 |
| Msa0546440 | AT1G32640.1 | 29.936 | 157 | 100 | 5 | 338 | 488 | 442 | 594 | 6.37e-12 | 68.6 |
Find 112 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGTTCAGAATTCAAATT+TGG | 0.160318 | 4_1:-38142449 | Msa0546440:CDS |
| AAATTTGGCAGGTTGATTTC+TGG | 0.184628 | 4_1:+38142091 | None:intergenic |
| TCCATTAGATTCTTCTGATT+TGG | 0.203292 | 4_1:-38148327 | Msa0546440:CDS |
| AACCTCAGCCTTAAGCTTCT+TGG | 0.225200 | 4_1:+38142805 | None:intergenic |
| CAAAACTTTGATTCATTATA+AGG | 0.232350 | 4_1:+38143643 | None:intergenic |
| AATTGATCCTTGATGAGTTT+TGG | 0.235753 | 4_1:+38142754 | None:intergenic |
| ATCACCCATAGCTTTAAATT+TGG | 0.237169 | 4_1:+38142076 | None:intergenic |
| GCCATTGGAGGGGATCATTC+TGG | 0.239848 | 4_1:+38148847 | None:intergenic |
| TCCTTCAGTTCATAAGAATT+TGG | 0.246725 | 4_1:+38148644 | None:intergenic |
| TGTTAAAATAGTATGCAATA+AGG | 0.282684 | 4_1:-38142524 | Msa0546440:CDS |
| GAATCTAATGGAACTATAAA+AGG | 0.283886 | 4_1:+38148338 | None:intergenic |
| GAAGTGTACCTTAGTTATAT+TGG | 0.288057 | 4_1:+38143299 | None:intergenic |
| CCATTAGATTCTTCTGATTT+GGG | 0.303530 | 4_1:-38148326 | Msa0546440:CDS |
| GCTTTACGCATTGCGTTCTT+TGG | 0.305835 | 4_1:-38143325 | Msa0546440:CDS |
| AAGCTTAAGGCTGAGGTTGC+AGG | 0.310327 | 4_1:-38142800 | Msa0546440:CDS |
| TTGATGAATTGATCAAAGTT+TGG | 0.317687 | 4_1:+38143720 | None:intergenic |
| GAAACTTGGTGCAAGAAATA+TGG | 0.324099 | 4_1:-38148578 | Msa0546440:CDS |
| TCAAATCCCTAACTCGATTA+AGG | 0.327507 | 4_1:+38148705 | None:intergenic |
| TTGGTGTCCTATTGATTGTT+TGG | 0.329586 | 4_1:+38148663 | None:intergenic |
| CTGTAGCGTTTATGTTCCTC+TGG | 0.347837 | 4_1:+38148542 | None:intergenic |
| ATGCTACTAATTTGAATACT+TGG | 0.354531 | 4_1:-38148259 | Msa0546440:CDS |
| ACTGAAGGAAACAATCAATT+TGG | 0.356643 | 4_1:-38148630 | Msa0546440:CDS |
| AAGTGTACCTTAGTTATATT+GGG | 0.358633 | 4_1:+38143300 | None:intergenic |
| GCCATTGGAGAGACTCATTC+TGG | 0.364837 | 4_1:+38148805 | None:intergenic |
| AGACGATGAGAGTTGTCATT+TGG | 0.365480 | 4_1:+38148425 | None:intergenic |
| CAAATCCATGCATGATAATC+TGG | 0.376928 | 4_1:-38148753 | Msa0546440:CDS |
| TTATCTATGTTGTGATCAAA+TGG | 0.384556 | 4_1:+38143588 | None:intergenic |
| ATTATATTTATAGATGGATA+AGG | 0.392223 | 4_1:-38142879 | Msa0546440:intron |
| ACCTGCCAAATTTAAAGCTA+TGG | 0.396521 | 4_1:-38142081 | Msa0546440:CDS |
| TCTATGAACACTTCGAAACT+TGG | 0.399054 | 4_1:-38148592 | Msa0546440:CDS |
| CCATTGGAGGGGATCATTCT+GGG | 0.401012 | 4_1:+38148848 | None:intergenic |
| CCCAAATCAGAAGAATCTAA+TGG | 0.410187 | 4_1:+38148326 | None:intergenic |
| CGTAAAGCTTATCCTTCATT+CGG | 0.412112 | 4_1:+38143340 | None:intergenic |
| AGCATGGATGAGCGCCACTA+TGG | 0.412834 | 4_1:-38148395 | Msa0546440:CDS |
| ATTACAAGCCAAGAAGCTTA+AGG | 0.413672 | 4_1:-38142813 | Msa0546440:CDS |
| GTTAAAATAGTATGCAATAA+GGG | 0.416472 | 4_1:-38142523 | Msa0546440:CDS |
| ATGGATAAGGCTTCTATCAT+TGG | 0.423797 | 4_1:-38142866 | Msa0546440:CDS |
| TTCAACGCCTTAATCGAGTT+AGG | 0.424786 | 4_1:-38148712 | Msa0546440:CDS |
| CCCATAGCTTTAAATTTGGC+AGG | 0.425488 | 4_1:+38142080 | None:intergenic |
| TTTGGTTCCCAATATAACTA+AGG | 0.432332 | 4_1:-38143307 | Msa0546440:intron |
| ACTCGATTAAGGCGTTGAAT+TGG | 0.435839 | 4_1:+38148716 | None:intergenic |
| GACGATGAGAGTTGTCATTT+GGG | 0.440001 | 4_1:+38148426 | None:intergenic |
| CAATTCATCAATTTGATTCG+TGG | 0.448543 | 4_1:-38143708 | Msa0546440:CDS |
| AATTCATCAATTTGATTCGT+GGG | 0.449395 | 4_1:-38143707 | Msa0546440:CDS |
| TTTGATCCTACTTCTTCACT+TGG | 0.449750 | 4_1:-38143549 | Msa0546440:CDS |
| AAGGTATGAATTCAAAGCCT+TGG | 0.451801 | 4_1:+38142038 | None:intergenic |
| TGAAAATAGGTGAAAGACTC+TGG | 0.451976 | 4_1:-38142115 | Msa0546440:intron |
| GCATATTGAAGCATTGTTGT+TGG | 0.458900 | 4_1:+38142706 | None:intergenic |
| TAGTATGCAATAAGGGAGAA+AGG | 0.463194 | 4_1:-38142516 | Msa0546440:CDS |
| TCAACGCCTTAATCGAGTTA+GGG | 0.464867 | 4_1:-38148711 | Msa0546440:CDS |
| AATATGCAAGAAAATTGTCC+AGG | 0.466755 | 4_1:-38142690 | Msa0546440:intron |
| CTTTGGTTTCTGAGAGGAGG+AGG | 0.467532 | 4_1:-38143368 | Msa0546440:CDS |
| TGTTGTTGTTGTTGCAGGAG+AGG | 0.472915 | 4_1:+38143458 | None:intergenic |
| AAATGATAGATCCAAGACTT+TGG | 0.473297 | 4_1:-38143385 | Msa0546440:CDS |
| ATGTTGTGATCAAATGGGTT+TGG | 0.479555 | 4_1:+38143594 | None:intergenic |
| GGAAGGAAGCGTCACGCCAT+TGG | 0.482014 | 4_1:+38148832 | None:intergenic |
| AATTTGGCCACTGTTTCTGA+TGG | 0.483700 | 4_1:-38142433 | Msa0546440:CDS |
| CATCAATTTGATTCGTGGGG+AGG | 0.485954 | 4_1:-38143703 | Msa0546440:CDS |
| TGAGCGAAGCTTCACGCCAT+TGG | 0.485991 | 4_1:+38148790 | None:intergenic |
| TATCTATGTTGTGATCAAAT+GGG | 0.486497 | 4_1:+38143589 | None:intergenic |
| CCTCTCAGAAACCAAAGTCT+TGG | 0.490550 | 4_1:+38143374 | None:intergenic |
| GCCATACGAGAGATTCATCC+TGG | 0.500627 | 4_1:+38148889 | None:intergenic |
| CTACAGGTTCAATCTGTTCA+AGG | 0.503789 | 4_1:-38148525 | Msa0546440:CDS |
| ACCAAATTCTTATGAACTGA+AGG | 0.514998 | 4_1:-38148645 | Msa0546440:CDS |
| ATGTGTCAAGCGTGAAAAGA+AGG | 0.518768 | 4_1:+38142019 | None:intergenic |
| ATGGAACTATAAAAGGTTGT+CGG | 0.519300 | 4_1:+38148345 | None:intergenic |
| ATGTTTCAAGTGGATGAAAG+AGG | 0.519776 | 4_1:-38142553 | Msa0546440:CDS |
| TGTAGCGTTTATGTTCCTCT+GGG | 0.521857 | 4_1:+38148543 | None:intergenic |
| AGTATGCAATAAGGGAGAAA+GGG | 0.525003 | 4_1:-38142515 | Msa0546440:CDS |
| CCTGCCAAATTTAAAGCTAT+GGG | 0.525800 | 4_1:-38142080 | Msa0546440:CDS |
| AAAGAACCAAGTGAAGAAGT+AGG | 0.527298 | 4_1:+38143543 | None:intergenic |
| CATCGAGAAAATGCAGAGAA+AGG | 0.527404 | 4_1:+38148468 | None:intergenic |
| GAGGAGGCGAAGCCGAATGA+AGG | 0.530731 | 4_1:-38143352 | Msa0546440:CDS |
| AGGAAGCGTCACGCCATTGG+AGG | 0.532162 | 4_1:+38148835 | None:intergenic |
| TGTTTCAAGTGGATGAAAGA+GGG | 0.533128 | 4_1:-38142552 | Msa0546440:CDS |
| GGCGTTGAATTGGTAGCACC+TGG | 0.535555 | 4_1:+38148726 | None:intergenic |
| TGTTAATCAACGCTTCCTCC+AGG | 0.537310 | 4_1:-38148907 | Msa0546440:CDS |
| GCAATGTATCTGCACAAGAT+TGG | 0.541189 | 4_1:-38148371 | Msa0546440:CDS |
| TTCGAAGTGTTCATAGAAGT+CGG | 0.541979 | 4_1:+38148598 | None:intergenic |
| ATCACCACTTGTAGTTGTTG+TGG | 0.544215 | 4_1:+38143425 | None:intergenic |
| CAGAGGAACATAAACGCTAC+AGG | 0.546873 | 4_1:-38148541 | Msa0546440:CDS |
| TTGTGATCAAATGGGTTTGG+AGG | 0.546978 | 4_1:+38143597 | None:intergenic |
| GTCATCCAGATTATCATGCA+TGG | 0.548329 | 4_1:+38148748 | None:intergenic |
| AGCCAAGAAGCTTAAGGCTG+AGG | 0.549244 | 4_1:-38142807 | Msa0546440:CDS |
| TCCAGGATGAATCTCTCGTA+TGG | 0.553347 | 4_1:-38148890 | Msa0546440:CDS |
| GGAGAGACTCATTCTGGAGG+AGG | 0.559575 | 4_1:+38148811 | None:intergenic |
| AGACTTTGGTTTCTGAGAGG+AGG | 0.567716 | 4_1:-38143371 | Msa0546440:CDS |
| GTAGATTGATATGTTTCAAG+TGG | 0.578490 | 4_1:-38142563 | Msa0546440:intron |
| CCCAGAATGATCCCCTCCAA+TGG | 0.578929 | 4_1:-38148848 | Msa0546440:CDS |
| GCAGTGTCCAAAACTCATCA+AGG | 0.579680 | 4_1:-38142761 | Msa0546440:CDS |
| GGAAGCGTCACGCCATTGGA+GGG | 0.582537 | 4_1:+38148836 | None:intergenic |
| TTTGAATACTTGGAAAACGA+AGG | 0.589603 | 4_1:-38148249 | Msa0546440:intron |
| AGACTCATTCTGGAGGAGGA+AGG | 0.592114 | 4_1:+38148815 | None:intergenic |
| AATGACAACTCTCATCGTCT+AGG | 0.594641 | 4_1:-38148422 | Msa0546440:CDS |
| CCAAGACTTTGGTTTCTGAG+AGG | 0.603254 | 4_1:-38143374 | Msa0546440:CDS |
| GCATGATAATCTGGATGACC+AGG | 0.604467 | 4_1:-38148744 | Msa0546440:CDS |
| GAATTAAGAGTAGAAAATGA+TGG | 0.612562 | 4_1:-38143492 | Msa0546440:CDS |
| ATTACCACAACAACTACAAG+TGG | 0.612581 | 4_1:-38143429 | Msa0546440:CDS |
| GAAGCGTCACGCCATTGGAG+GGG | 0.614256 | 4_1:+38148837 | None:intergenic |
| GCAGATACATTGCGCCATAG+TGG | 0.616062 | 4_1:+38148381 | None:intergenic |
| TCCAGAATGAGTCTCTCCAA+TGG | 0.619199 | 4_1:-38148806 | Msa0546440:CDS |
| ATGGGTTTGGAGGAAATGAA+AGG | 0.630120 | 4_1:+38143607 | None:intergenic |
| TAGAAAACCATCAGAAACAG+TGG | 0.631132 | 4_1:+38142426 | None:intergenic |
| ATTCATCAATTTGATTCGTG+GGG | 0.631333 | 4_1:-38143706 | Msa0546440:CDS |
| CATTGGAGGGGATCATTCTG+GGG | 0.639096 | 4_1:+38148849 | None:intergenic |
| ATGCAATAAGGGAGAAAGGG+TGG | 0.649433 | 4_1:-38142512 | Msa0546440:CDS |
| TCATCGTCTAGGCTGCAGCA+TGG | 0.662339 | 4_1:-38148411 | Msa0546440:CDS |
| ATTGGAGGGGATCATTCTGG+GGG | 0.681825 | 4_1:+38148850 | None:intergenic |
| ATTGGAGAGACTCATTCTGG+AGG | 0.685841 | 4_1:+38148808 | None:intergenic |
| GTAGCGTTTATGTTCCTCTG+GGG | 0.719905 | 4_1:+38148544 | None:intergenic |
| ATACGAGAGATTCATCCTGG+AGG | 0.745547 | 4_1:+38148892 | None:intergenic |
| TGGCAAAACATACTCCCCAG+AGG | 0.774295 | 4_1:-38148558 | Msa0546440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAAACAATATAAACTT+AGG | + | chr4_1:38143766-38143785 | None:intergenic | 10.0% |
| !!! | AATATTTTAATTTTCTCTTT+GGG | + | chr4_1:38145870-38145889 | None:intergenic | 10.0% |
| !!! | TAATATTTTAATTTTCTCTT+TGG | + | chr4_1:38145871-38145890 | None:intergenic | 10.0% |
| !!! | TATGTATATGATATTAATTT+TGG | + | chr4_1:38145949-38145968 | None:intergenic | 10.0% |
| !!! | TTTTTATTACCATAATATTT+AGG | + | chr4_1:38148733-38148752 | None:intergenic | 10.0% |
| !! | AATTATACAACAAATTAAAC+CGG | - | chr4_1:38143899-38143918 | Msa0546440:intron | 15.0% |
| !!! | ACTTTTAATTAGTTTTATAC+AGG | - | chr4_1:38144333-38144352 | Msa0546440:intron | 15.0% |
| !! | TATACCTTTATAAAGTTTAT+AGG | + | chr4_1:38144554-38144573 | None:intergenic | 15.0% |
| !!! | TTAAATATTACATTTTGTTG+AGG | + | chr4_1:38144771-38144790 | None:intergenic | 15.0% |
| !!! | TTTTTACTTCATCTTATTTA+AGG | - | chr4_1:38144924-38144943 | Msa0546440:intron | 15.0% |
| !!! | TTTTACTTCATCTTATTTAA+GGG | - | chr4_1:38144925-38144944 | Msa0546440:intron | 15.0% |
| !!! | TTTTTGTGGTTAATTAAAAT+AGG | + | chr4_1:38145536-38145555 | None:intergenic | 15.0% |
| !! | TTATATAACTCCTTAAAAAA+TGG | + | chr4_1:38145675-38145694 | None:intergenic | 15.0% |
| !! | CATGATAGATAAAAAAAAAT+GGG | + | chr4_1:38145805-38145824 | None:intergenic | 15.0% |
| !!! | AAGATTCTTTTAAAATCATA+TGG | - | chr4_1:38145844-38145863 | Msa0546440:intron | 15.0% |
| !! | AACAAAGAAAAATAACAATA+GGG | + | chr4_1:38146547-38146566 | None:intergenic | 15.0% |
| !! | AAACAAAGAAAAATAACAAT+AGG | + | chr4_1:38146548-38146567 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTGTTTTTTTCTT+TGG | - | chr4_1:38146555-38146574 | Msa0546440:intron | 15.0% |
| !! | ATTATATTTATAGATGGATA+AGG | - | chr4_1:38148053-38148072 | Msa0546440:intron | 15.0% |
| !! | AATATTTAACCTTAAATAGA+GGG | + | chr4_1:38148562-38148581 | None:intergenic | 15.0% |
| !! | AAATATTTAACCTTAAATAG+AGG | + | chr4_1:38148563-38148582 | None:intergenic | 15.0% |
| !!! | AAACAAAATTACATGATTTT+AGG | - | chr4_1:38148646-38148665 | Msa0546440:CDS | 15.0% |
| !! | CTAAAAAAACCTAAATATTA+TGG | - | chr4_1:38148721-38148740 | Msa0546440:CDS | 15.0% |
| !!! | TTTTTTTTCACAATTAGTCT+AGG | + | chr4_1:38142924-38142943 | None:intergenic | 20.0% |
| !! | ATTATTGTAAATGAGACTAA+TGG | - | chr4_1:38143077-38143096 | Msa0546440:intron | 20.0% |
| !! | CAATACTTAAAAGAAGAATA+TGG | + | chr4_1:38143230-38143249 | None:intergenic | 20.0% |
| !! | ATTCTACTAAATTGATAAGT+TGG | - | chr4_1:38143353-38143372 | Msa0546440:CDS | 20.0% |
| !!! | TTTTAGAAAGGTTTTTAACT+CGG | + | chr4_1:38143619-38143638 | None:intergenic | 20.0% |
| !!! | AGATTAGGAATATTTTAGAA+AGG | + | chr4_1:38143631-38143650 | None:intergenic | 20.0% |
| !! | TTAAATAGGTCTTAAAGATT+AGG | + | chr4_1:38143646-38143665 | None:intergenic | 20.0% |
| !! | CAATTTATTCTGTATTTGTA+AGG | - | chr4_1:38143969-38143988 | Msa0546440:intron | 20.0% |
| !! | AAATGAATTAAAACAGCAAA+AGG | - | chr4_1:38144076-38144095 | Msa0546440:intron | 20.0% |
| !! | GTTACCTATAAACTTTATAA+AGG | - | chr4_1:38144547-38144566 | Msa0546440:intron | 20.0% |
| !! | GTGTAAAATATTAATATGTG+TGG | - | chr4_1:38144656-38144675 | Msa0546440:intron | 20.0% |
| !! | TATAAAGAAAGTTAAAGTTG+TGG | - | chr4_1:38144703-38144722 | Msa0546440:intron | 20.0% |
| !! | TTAATTACCAATTTAACTAC+CGG | - | chr4_1:38144844-38144863 | Msa0546440:intron | 20.0% |
| !!! | TATCGTCTCTAATATTTTTT+TGG | + | chr4_1:38144986-38145005 | None:intergenic | 20.0% |
| !!! | ATTTTTACCAACTTAACAAT+CGG | - | chr4_1:38145080-38145099 | Msa0546440:intron | 20.0% |
| !!! | ATTCAATGTCTTAAGATTTT+TGG | - | chr4_1:38145207-38145226 | Msa0546440:intron | 20.0% |
| !!! | TTAAGATTTTTGGTAATATG+TGG | - | chr4_1:38145217-38145236 | Msa0546440:intron | 20.0% |
| !! | ACATTATTTAATCTGTTGAA+AGG | - | chr4_1:38145746-38145765 | Msa0546440:intron | 20.0% |
| !! | CCATGATAGATAAAAAAAAA+TGG | + | chr4_1:38145806-38145825 | None:intergenic | 20.0% |
| !!! | CCATTTTTTTTTATCTATCA+TGG | - | chr4_1:38145803-38145822 | Msa0546440:intron | 20.0% |
| !!! | ATATACATAGTTTTAAAACC+CGG | - | chr4_1:38145960-38145979 | Msa0546440:intron | 20.0% |
| !!! | ATTTTTCAAACATAAATCAG+AGG | - | chr4_1:38146157-38146176 | Msa0546440:intron | 20.0% |
| !! | ATATTGTAAAGAAGAAGAAA+AGG | - | chr4_1:38146370-38146389 | Msa0546440:intron | 20.0% |
| !! | CTATAATAGAAATGAAACTA+GGG | - | chr4_1:38146433-38146452 | Msa0546440:intron | 20.0% |
| !!! | ATGATCATAGTTTTAAAACT+CGG | + | chr4_1:38146834-38146853 | None:intergenic | 20.0% |
| !! | CAAAACTTTGATTCATTATA+AGG | + | chr4_1:38147292-38147311 | None:intergenic | 20.0% |
| !!! | AGCGATTTTCATTTTATAAA+TGG | + | chr4_1:38147849-38147868 | None:intergenic | 20.0% |
| !! | TTATAAAATGAAAATCGCTT+CGG | - | chr4_1:38147850-38147869 | Msa0546440:intron | 20.0% |
| !!! | TATTTTGGATAGTAACATAT+AGG | + | chr4_1:38147895-38147914 | None:intergenic | 20.0% |
| !!! | ACAATGAATCTTAACTATTT+TGG | + | chr4_1:38147910-38147929 | None:intergenic | 20.0% |
| !!! | TTGGTAAATTGAATCTTTTT+GGG | + | chr4_1:38148210-38148229 | None:intergenic | 20.0% |
| !!! | ATTGTAATTTGTAACATCTT+TGG | - | chr4_1:38148334-38148353 | Msa0546440:CDS | 20.0% |
| !! | TGTTAAAATAGTATGCAATA+AGG | - | chr4_1:38148408-38148427 | Msa0546440:CDS | 20.0% |
| !! | GTTAAAATAGTATGCAATAA+GGG | - | chr4_1:38148409-38148428 | Msa0546440:CDS | 20.0% |
| !! | CAGATAATGAAATAGAATAA+TGG | + | chr4_1:38148766-38148785 | None:intergenic | 20.0% |
| !!! | CTATTGATTGTTTGGATTTT+TGG | + | chr4_1:38142264-38142283 | None:intergenic | 25.0% |
| ! | CAAAAATCCAAACAATCAAT+AGG | - | chr4_1:38142262-38142281 | Msa0546440:intron | 25.0% |
| ! | GAATCTAATGGAACTATAAA+AGG | + | chr4_1:38142597-38142616 | None:intergenic | 25.0% |
| ! | ATGCTACTAATTTGAATACT+TGG | - | chr4_1:38142673-38142692 | Msa0546440:intron | 25.0% |
| ! | TCAATGACTTTAATGAAACA+AGG | + | chr4_1:38142780-38142799 | None:intergenic | 25.0% |
| ! | GTTTCATTAAAGTCATTGAT+CGG | - | chr4_1:38142781-38142800 | Msa0546440:CDS | 25.0% |
| ! | TTTCATTAAAGTCATTGATC+GGG | - | chr4_1:38142782-38142801 | Msa0546440:CDS | 25.0% |
| !!! | ATCTTTAAGGTGAATAAATG+AGG | + | chr4_1:38142892-38142911 | None:intergenic | 25.0% |
| ! | TGATGCTATAGTGTAAAAAT+GGG | + | chr4_1:38143024-38143043 | None:intergenic | 25.0% |
| ! | AATCACAATTCATACAACAA+TGG | + | chr4_1:38143060-38143079 | None:intergenic | 25.0% |
| !! | AATAGGTCATTGAATTTGTT+GGG | - | chr4_1:38143114-38143133 | Msa0546440:intron | 25.0% |
| ! | AATAAGGGAATAGTATCATA+AGG | + | chr4_1:38143278-38143297 | None:intergenic | 25.0% |
| !!! | ACCAACTTATCAGATTTTTT+GGG | + | chr4_1:38143459-38143478 | None:intergenic | 25.0% |
| !!! | AACCAACTTATCAGATTTTT+TGG | + | chr4_1:38143460-38143479 | None:intergenic | 25.0% |
| !! | CATGCTTTAATCACAATTTT+GGG | + | chr4_1:38143735-38143754 | None:intergenic | 25.0% |
| !!! | TGCATACATGTTTTAAATTG+TGG | - | chr4_1:38143862-38143881 | Msa0546440:intron | 25.0% |
| ! | AAAAGACTAATCCATAAAGT+GGG | + | chr4_1:38144453-38144472 | None:intergenic | 25.0% |
| ! | TAAAAGACTAATCCATAAAG+TGG | + | chr4_1:38144454-38144473 | None:intergenic | 25.0% |
| !! | GTACTTTAATTTCATTGAGT+TGG | - | chr4_1:38144512-38144531 | Msa0546440:intron | 25.0% |
| ! | TGAAGTTGTTAAAGAGAAAA+AGG | - | chr4_1:38144593-38144612 | Msa0546440:intron | 25.0% |
| ! | TGATGATAGATTAAAAGTTG+TGG | - | chr4_1:38144633-38144652 | Msa0546440:intron | 25.0% |
| ! | GATGATAGATTAAAAGTTGT+GGG | - | chr4_1:38144634-38144653 | Msa0546440:intron | 25.0% |
| ! | ATGATTTGATGTAATCAATG+GGG | + | chr4_1:38144819-38144838 | None:intergenic | 25.0% |
| ! | CATGATTTGATGTAATCAAT+GGG | + | chr4_1:38144820-38144839 | None:intergenic | 25.0% |
| ! | TCATGATTTGATGTAATCAA+TGG | + | chr4_1:38144821-38144840 | None:intergenic | 25.0% |
| !! | TATATATGGGGAAGTATATA+TGG | - | chr4_1:38145020-38145039 | Msa0546440:intron | 25.0% |
| !! | ATATATGGGGAAGTATATAT+GGG | - | chr4_1:38145021-38145040 | Msa0546440:intron | 25.0% |
| !!! | CTTGAGTGTTAGTTATTTTA+TGG | - | chr4_1:38145339-38145358 | Msa0546440:intron | 25.0% |
| !! | AATTGCTTTCACAATTTTTG+TGG | + | chr4_1:38145550-38145569 | None:intergenic | 25.0% |
| !!! | TTGCATTTTGCCATTTTTTA+AGG | - | chr4_1:38145662-38145681 | Msa0546440:intron | 25.0% |
| !!! | GATATTAATTTTGGTGTGAA+TGG | + | chr4_1:38145940-38145959 | None:intergenic | 25.0% |
| ! | ATAAATCAGAGGAAAAAAAC+CGG | - | chr4_1:38146168-38146187 | Msa0546440:intron | 25.0% |
| ! | AATAAGGAAATGAGAAAGAA+AGG | - | chr4_1:38146197-38146216 | Msa0546440:intron | 25.0% |
| ! | GCTATAATAGAAATGAAACT+AGG | - | chr4_1:38146432-38146451 | Msa0546440:intron | 25.0% |
| ! | CAAATAGAGCTTGAATAAAT+GGG | + | chr4_1:38146507-38146526 | None:intergenic | 25.0% |
| ! | AACATTTAACCGAGTAAAAT+TGG | + | chr4_1:38146673-38146692 | None:intergenic | 25.0% |
| ! | TTGACATGATGAATAACTAA+TGG | + | chr4_1:38146867-38146886 | None:intergenic | 25.0% |
| ! | TGGTTGAAAGTTAGAAAATA+TGG | + | chr4_1:38147112-38147131 | None:intergenic | 25.0% |
| !! | AAAATCCATTGTGTCTATTT+TGG | + | chr4_1:38147132-38147151 | None:intergenic | 25.0% |
| ! | TTGATGAATTGATCAAAGTT+TGG | + | chr4_1:38147215-38147234 | None:intergenic | 25.0% |
| !! | AATTCATCAATTTGATTCGT+GGG | - | chr4_1:38147225-38147244 | Msa0546440:intron | 25.0% |
| ! | TATCTATGTTGTGATCAAAT+GGG | + | chr4_1:38147346-38147365 | None:intergenic | 25.0% |
| ! | TTATCTATGTTGTGATCAAA+TGG | + | chr4_1:38147347-38147366 | None:intergenic | 25.0% |
| ! | GAATTAAGAGTAGAAAATGA+TGG | - | chr4_1:38147440-38147459 | Msa0546440:intron | 25.0% |
| ! | AAGTGTACCTTAGTTATATT+GGG | + | chr4_1:38147635-38147654 | None:intergenic | 25.0% |
| !! | TTTATCATAATTTGAAGCAG+CGG | + | chr4_1:38147780-38147799 | None:intergenic | 25.0% |
| ! | ATGCTTGTATGAAATTTACA+AGG | + | chr4_1:38147945-38147964 | None:intergenic | 25.0% |
| ! | TCTCAAATAAAAAGCAAGTA+AGG | + | chr4_1:38148003-38148022 | None:intergenic | 25.0% |
| !! | TGGTAAATTGAATCTTTTTG+GGG | + | chr4_1:38148209-38148228 | None:intergenic | 25.0% |
| !!! | GTTGGTAAATTGAATCTTTT+TGG | + | chr4_1:38148211-38148230 | None:intergenic | 25.0% |
| ! | TGATATTTATCAAACAAACC+TGG | + | chr4_1:38148263-38148282 | None:intergenic | 25.0% |
| ! | CAATGTTCAGAATTCAAATT+TGG | - | chr4_1:38148483-38148502 | Msa0546440:CDS | 25.0% |
| !!! | GTAATTTTGTTTTGTAGAGA+CGG | + | chr4_1:38148638-38148657 | None:intergenic | 25.0% |
| ! | AATTTGTAGAGACTAAAAAG+TGG | - | chr4_1:38148690-38148709 | Msa0546440:CDS | 25.0% |
| ! | CATGCTTATTATGTGAAAAT+AGG | - | chr4_1:38148804-38148823 | Msa0546440:CDS | 25.0% |
| ACCAAATTCTTATGAACTGA+AGG | - | chr4_1:38142287-38142306 | Msa0546440:intron | 30.0% | |
| TCCTTCAGTTCATAAGAATT+TGG | + | chr4_1:38142291-38142310 | None:intergenic | 30.0% | |
| ACTGAAGGAAACAATCAATT+TGG | - | chr4_1:38142302-38142321 | Msa0546440:intron | 30.0% | |
| ! | CTTTTGTTAGGAGGATTAAT+GGG | + | chr4_1:38142441-38142460 | None:intergenic | 30.0% |
| ! | ACTTTTGTTAGGAGGATTAA+TGG | + | chr4_1:38142442-38142461 | None:intergenic | 30.0% |
| ! | AGAGAAAGGTAACTTTTGTT+AGG | + | chr4_1:38142453-38142472 | None:intergenic | 30.0% |
| ATGGAACTATAAAAGGTTGT+CGG | + | chr4_1:38142590-38142609 | None:intergenic | 30.0% | |
| TCCATTAGATTCTTCTGATT+TGG | - | chr4_1:38142605-38142624 | Msa0546440:intron | 30.0% | |
| CCATTAGATTCTTCTGATTT+GGG | - | chr4_1:38142606-38142625 | Msa0546440:intron | 30.0% | |
| TTTGAATACTTGGAAAACGA+AGG | - | chr4_1:38142683-38142702 | Msa0546440:intron | 30.0% | |
| !!! | GAAACAAGGATTGTTTTTGT+GGG | + | chr4_1:38142766-38142785 | None:intergenic | 30.0% |
| !!! | TGAAACAAGGATTGTTTTTG+TGG | + | chr4_1:38142767-38142786 | None:intergenic | 30.0% |
| TAGGCTAGAATTCATCTTTA+AGG | + | chr4_1:38142905-38142924 | None:intergenic | 30.0% | |
| !! | ATTTGAAATGAAAGTGCTCA+CGG | + | chr4_1:38142973-38142992 | None:intergenic | 30.0% |
| CTGATGCTATAGTGTAAAAA+TGG | + | chr4_1:38143025-38143044 | None:intergenic | 30.0% | |
| TGGTCAATTAGTAGTAGAAT+AGG | - | chr4_1:38143097-38143116 | Msa0546440:intron | 30.0% | |
| GAATAGGTCATTGAATTTGT+TGG | - | chr4_1:38143113-38143132 | Msa0546440:intron | 30.0% | |
| TGGCAAATGAAAAACGAATA+TGG | - | chr4_1:38143146-38143165 | Msa0546440:intron | 30.0% | |
| GGCAAATGAAAAACGAATAT+GGG | - | chr4_1:38143147-38143166 | Msa0546440:intron | 30.0% | |
| !! | TAATTTTGGAGACTAGATTG+TGG | + | chr4_1:38143312-38143331 | None:intergenic | 30.0% |
| TATCAATTGAGCTAAACTCA+CGG | + | chr4_1:38143386-38143405 | None:intergenic | 30.0% | |
| ! | TGAGTTTAGCTCAATTGATA+AGG | - | chr4_1:38143386-38143405 | Msa0546440:CDS | 30.0% |
| GACAATGCATAACATATACA+AGG | - | chr4_1:38143408-38143427 | Msa0546440:CDS | 30.0% | |
| !!! | AACTTATCAGATTTTTTGGG+TGG | + | chr4_1:38143456-38143475 | None:intergenic | 30.0% |
| ACCCAAAAAATCTGATAAGT+TGG | - | chr4_1:38143455-38143474 | Msa0546440:CDS | 30.0% | |
| TTTGTATAGCGCTCTTAAAT+AGG | + | chr4_1:38143660-38143679 | None:intergenic | 30.0% | |
| ! | GCATGCTTTAATCACAATTT+TGG | + | chr4_1:38143736-38143755 | None:intergenic | 30.0% |
| AGATCATCTAGTACTATTGT+TGG | + | chr4_1:38143791-38143810 | None:intergenic | 30.0% | |
| !! | CATGTTTTAAATTGTGGCTA+TGG | - | chr4_1:38143868-38143887 | Msa0546440:intron | 30.0% |
| ! | CTCAACTTGATAGTTTGATT+TGG | - | chr4_1:38144010-38144029 | Msa0546440:intron | 30.0% |
| !! | TTGATAGTTTGATTTGGAGT+TGG | - | chr4_1:38144016-38144035 | Msa0546440:intron | 30.0% |
| ! | TTTGTTACTTGAGTTGCTAT+CGG | - | chr4_1:38144207-38144226 | Msa0546440:intron | 30.0% |
| ! | GTGGTCTCTTATCTATTTTA+CGG | + | chr4_1:38144360-38144379 | None:intergenic | 30.0% |
| ! | TTTAATGATTCAAGTTCGCA+AGG | + | chr4_1:38144488-38144507 | None:intergenic | 30.0% |
| ! | TTCACTCATCTTGAATTTTG+TGG | + | chr4_1:38144577-38144596 | None:intergenic | 30.0% |
| ACACTTCTAATAGAATCTCA+TGG | + | chr4_1:38144795-38144814 | None:intergenic | 30.0% | |
| ATTAGATACAAACTCGATAC+CGG | + | chr4_1:38144866-38144885 | None:intergenic | 30.0% | |
| TTGTCCATCGCTTATATATA+TGG | - | chr4_1:38145006-38145025 | Msa0546440:intron | 30.0% | |
| TGTCCATCGCTTATATATAT+GGG | - | chr4_1:38145007-38145026 | Msa0546440:intron | 30.0% | |
| ! | TATATGGGGAAGTATATATG+GGG | - | chr4_1:38145022-38145041 | Msa0546440:intron | 30.0% |
| AGATAAAGTCTCACATTGAT+CGG | - | chr4_1:38145139-38145158 | Msa0546440:intron | 30.0% | |
| GTTGAACAACATATAAGAAG+CGG | - | chr4_1:38145172-38145191 | Msa0546440:intron | 30.0% | |
| TTGAACAACATATAAGAAGC+GGG | - | chr4_1:38145173-38145192 | Msa0546440:intron | 30.0% | |
| AAGTTGCATTCACACATTAT+TGG | + | chr4_1:38145322-38145341 | None:intergenic | 30.0% | |
| ! | TTTTACTCTATCTTACCTGA+AGG | - | chr4_1:38145371-38145390 | Msa0546440:intron | 30.0% |
| TTGTTCATCCTTTGTATATC+CGG | - | chr4_1:38145448-38145467 | Msa0546440:intron | 30.0% | |
| ATTAACACATAATACTTCCC+CGG | + | chr4_1:38145470-38145489 | None:intergenic | 30.0% | |
| !! | TATTTTGCTGATTGATGTCT+CGG | + | chr4_1:38145578-38145597 | None:intergenic | 30.0% |
| TTATCTATCATGGACATTTC+AGG | - | chr4_1:38145813-38145832 | Msa0546440:intron | 30.0% | |
| AAAATGAATCAAGATTGACC+CGG | + | chr4_1:38146142-38146161 | None:intergenic | 30.0% | |
| AAAAAACCGGATTCAGAATA+AGG | - | chr4_1:38146181-38146200 | Msa0546440:intron | 30.0% | |
| TCATTTCCTTATTCTGAATC+CGG | + | chr4_1:38146190-38146209 | None:intergenic | 30.0% | |
| CACGTGAATGCTTAATTAAA+GGG | + | chr4_1:38146243-38146262 | None:intergenic | 30.0% | |
| TCACGTGAATGCTTAATTAA+AGG | + | chr4_1:38146244-38146263 | None:intergenic | 30.0% | |
| CGATTGTAAAGAAGAAGAAA+AGG | - | chr4_1:38146306-38146325 | Msa0546440:intron | 30.0% | |
| AAGAAAAGGAACTGTGAAAA+TGG | - | chr4_1:38146320-38146339 | Msa0546440:intron | 30.0% | |
| AAAATGGTCTCAATTGATGT+TGG | - | chr4_1:38146336-38146355 | Msa0546440:intron | 30.0% | |
| AGAAAAGGAACTGTGAAAAA+TGG | - | chr4_1:38146385-38146404 | Msa0546440:intron | 30.0% | |
| AAAATGGTCTCAATTGTTGT+TGG | - | chr4_1:38146401-38146420 | Msa0546440:intron | 30.0% | |
| ! | TTGCCCCTTTTATAATTGAT+GGG | - | chr4_1:38146465-38146484 | Msa0546440:intron | 30.0% |
| AAGCCCATCAATTATAAAAG+GGG | + | chr4_1:38146471-38146490 | None:intergenic | 30.0% | |
| GAAGCCCATCAATTATAAAA+GGG | + | chr4_1:38146472-38146491 | None:intergenic | 30.0% | |
| !!! | CTTTTATAATTGATGGGCTT+CGG | - | chr4_1:38146471-38146490 | Msa0546440:intron | 30.0% |
| !!! | TTTTATAATTGATGGGCTTC+GGG | - | chr4_1:38146472-38146491 | Msa0546440:intron | 30.0% |
| GCAAATAGAGCTTGAATAAA+TGG | + | chr4_1:38146508-38146527 | None:intergenic | 30.0% | |
| !!! | AAGCTCTATTTGCTCTTTTT+TGG | - | chr4_1:38146515-38146534 | Msa0546440:intron | 30.0% |
| ! | TCGAATCATCCAATTTTACT+CGG | - | chr4_1:38146661-38146680 | Msa0546440:intron | 30.0% |
| ATCAAGTGATTAAACTCAAG+TGG | - | chr4_1:38146905-38146924 | Msa0546440:intron | 30.0% | |
| TTCAACCAAAATAGACACAA+TGG | - | chr4_1:38147124-38147143 | Msa0546440:intron | 30.0% | |
| TGAGTTACATGATTTCATTG+AGG | - | chr4_1:38147187-38147206 | Msa0546440:intron | 30.0% | |
| ! | CAATTCATCAATTTGATTCG+TGG | - | chr4_1:38147224-38147243 | Msa0546440:intron | 30.0% |
| ! | ATTCATCAATTTGATTCGTG+GGG | - | chr4_1:38147226-38147245 | Msa0546440:intron | 30.0% |
| !! | GATCTATCATTTTTCGACTT+TGG | + | chr4_1:38147539-38147558 | None:intergenic | 30.0% |
| AAATGATAGATCCAAGACTT+TGG | - | chr4_1:38147547-38147566 | Msa0546440:intron | 30.0% | |
| ! | TTTGGTTCCCAATATAACTA+AGG | - | chr4_1:38147625-38147644 | Msa0546440:intron | 30.0% |
| GAAGTGTACCTTAGTTATAT+TGG | + | chr4_1:38147636-38147655 | None:intergenic | 30.0% | |
| TATAACTAAGGTACACTTCA+TGG | - | chr4_1:38147637-38147656 | Msa0546440:intron | 30.0% | |
| !!! | ATGGTTTTGAATTGTTGTTG+CGG | - | chr4_1:38147656-38147675 | Msa0546440:intron | 30.0% |
| !! | GAGAAATTTTGACGACATTT+TGG | + | chr4_1:38147707-38147726 | None:intergenic | 30.0% |
| ATTTCTCTTGTGAAACCATT+AGG | - | chr4_1:38147720-38147739 | Msa0546440:intron | 30.0% | |
| TTTCTCTTGTGAAACCATTA+GGG | - | chr4_1:38147721-38147740 | Msa0546440:intron | 30.0% | |
| GTAACATATAGGCTAAATAG+TGG | + | chr4_1:38147884-38147903 | None:intergenic | 30.0% | |
| ! | AATTGATCCTTGATGAGTTT+TGG | + | chr4_1:38148181-38148200 | None:intergenic | 30.0% |
| AATATGCAAGAAAATTGTCC+AGG | - | chr4_1:38148242-38148261 | Msa0546440:intron | 30.0% | |
| ATTTGTAACATCTTTGGATG+TGG | - | chr4_1:38148340-38148359 | Msa0546440:CDS | 30.0% | |
| GTAGATTGATATGTTTCAAG+TGG | - | chr4_1:38148369-38148388 | Msa0546440:CDS | 30.0% | |
| AGCTATATTCCCTCTATTTA+AGG | - | chr4_1:38148550-38148569 | Msa0546440:CDS | 30.0% | |
| !! | ATCACCCATAGCTTTAAATT+TGG | + | chr4_1:38148859-38148878 | None:intergenic | 30.0% |
| CAAATCCATGCATGATAATC+TGG | - | chr4_1:38142179-38142198 | Msa0546440:intron | 35.0% | |
| TCAAATCCCTAACTCGATTA+AGG | + | chr4_1:38142230-38142249 | None:intergenic | 35.0% | |
| !!! | GTTTGGATTTTTGGTATCAG+CGG | + | chr4_1:38142255-38142274 | None:intergenic | 35.0% |
| ! | TTGGTGTCCTATTGATTGTT+TGG | + | chr4_1:38142272-38142291 | None:intergenic | 35.0% |
| ! | TTCGAAGTGTTCATAGAAGT+CGG | + | chr4_1:38142337-38142356 | None:intergenic | 35.0% |
| TCTATGAACACTTCGAAACT+TGG | - | chr4_1:38142340-38142359 | Msa0546440:intron | 35.0% | |
| !! | GAAACTTGGTGCAAGAAATA+TGG | - | chr4_1:38142354-38142373 | Msa0546440:intron | 35.0% |
| ! | GAAAGGTAACTTTTGTTAGG+AGG | + | chr4_1:38142450-38142469 | None:intergenic | 35.0% |
| CCCAAATCAGAAGAATCTAA+TGG | + | chr4_1:38142609-38142628 | None:intergenic | 35.0% | |
| !! | ATTTCCCAAGGAGTATTTCA+AGG | - | chr4_1:38142730-38142749 | Msa0546440:CDS | 35.0% |
| TGATCCTTGTTAAGAATGCT+TGG | - | chr4_1:38142857-38142876 | Msa0546440:CDS | 35.0% | |
| ! | GGTGAATAAATGAGGTGTTT+AGG | + | chr4_1:38142884-38142903 | None:intergenic | 35.0% |
| !! | TTTGAAATGAAAGTGCTCAC+GGG | + | chr4_1:38142972-38142991 | None:intergenic | 35.0% |
| GTGGTCTACTCTCAAAATAA+GGG | + | chr4_1:38143293-38143312 | None:intergenic | 35.0% | |
| TGTGGTCTACTCTCAAAATA+AGG | + | chr4_1:38143294-38143313 | None:intergenic | 35.0% | |
| ATCAATTGAGCTAAACTCAC+GGG | + | chr4_1:38143385-38143404 | None:intergenic | 35.0% | |
| !! | CCTTCACTTGCTATAATATC+CGG | + | chr4_1:38143921-38143940 | None:intergenic | 35.0% |
| AAAACAGCAAAAGGATCACT+TGG | - | chr4_1:38144085-38144104 | Msa0546440:intron | 35.0% | |
| ! | ATAACTGTGAAGTCTTGTGA+AGG | + | chr4_1:38144240-38144259 | None:intergenic | 35.0% |
| TGTGTGTGAAGAGAATCATA+GGG | + | chr4_1:38144312-38144331 | None:intergenic | 35.0% | |
| ATGTGTGTGAAGAGAATCAT+AGG | + | chr4_1:38144313-38144332 | None:intergenic | 35.0% | |
| GAGAAAAAGGTTATACCATC+AGG | - | chr4_1:38144606-38144625 | Msa0546440:intron | 35.0% | |
| AAAAGGTTATACCATCAGGT+CGG | - | chr4_1:38144610-38144629 | Msa0546440:intron | 35.0% | |
| !! | TGTAGCGCAACGTTATTTTA+TGG | - | chr4_1:38144894-38144913 | Msa0546440:intron | 35.0% |
| GTCCATCGCTTATATATATG+GGG | - | chr4_1:38145008-38145027 | Msa0546440:intron | 35.0% | |
| TTCCCCATATATATAAGCGA+TGG | + | chr4_1:38145013-38145032 | None:intergenic | 35.0% | |
| ! | CTTCATACCGATTGTTAAGT+TGG | + | chr4_1:38145090-38145109 | None:intergenic | 35.0% |
| TGGATATTGATGAGCTATGA+GGG | + | chr4_1:38145302-38145321 | None:intergenic | 35.0% | |
| TTGGATATTGATGAGCTATG+AGG | + | chr4_1:38145303-38145322 | None:intergenic | 35.0% | |
| ACTATGAAGACTAATCCTTC+AGG | + | chr4_1:38145389-38145408 | None:intergenic | 35.0% | |
| !! | GAAGGATTAGTCTTCATAGT+TGG | - | chr4_1:38145389-38145408 | Msa0546440:intron | 35.0% |
| TGTTCATCCTTTGTATATCC+GGG | - | chr4_1:38145449-38145468 | Msa0546440:intron | 35.0% | |
| ATTTCACTTTCACATCATGC+TGG | + | chr4_1:38145622-38145641 | None:intergenic | 35.0% | |
| TGCTACAAATAGCACTTATC+TGG | - | chr4_1:38145894-38145913 | Msa0546440:intron | 35.0% | |
| AAATAGCACTTATCTGGTGT+AGG | - | chr4_1:38145900-38145919 | Msa0546440:intron | 35.0% | |
| AATAGCACTTATCTGGTGTA+GGG | - | chr4_1:38145901-38145920 | Msa0546440:intron | 35.0% | |
| AGGAAATGAGAAAGAAAGGT+AGG | - | chr4_1:38146201-38146220 | Msa0546440:intron | 35.0% | |
| ! | CTTGCCCCTTTTATAATTGA+TGG | - | chr4_1:38146464-38146483 | Msa0546440:intron | 35.0% |
| CGAAGCCCATCAATTATAAA+AGG | + | chr4_1:38146473-38146492 | None:intergenic | 35.0% | |
| ATGACTGAATCGGATTGAAT+CGG | + | chr4_1:38146737-38146756 | None:intergenic | 35.0% | |
| !!! | CATAGTTTTAAAACTCGGAC+CGG | + | chr4_1:38146829-38146848 | None:intergenic | 35.0% |
| ! | TTAATGTTTGCTAGTGTCTC+TGG | + | chr4_1:38147158-38147177 | None:intergenic | 35.0% |
| ! | ATGTTGTGATCAAATGGGTT+TGG | + | chr4_1:38147341-38147360 | None:intergenic | 35.0% |
| TTTGATCCTACTTCTTCACT+TGG | - | chr4_1:38147383-38147402 | Msa0546440:intron | 35.0% | |
| AAAGAACCAAGTGAAGAAGT+AGG | + | chr4_1:38147392-38147411 | None:intergenic | 35.0% | |
| !!! | GGTTCTTTCTCTTGTTTTGA+TGG | - | chr4_1:38147404-38147423 | Msa0546440:intron | 35.0% |
| !!! | TTGTTTTGATGGAGAAGCTA+AGG | - | chr4_1:38147415-38147434 | Msa0546440:intron | 35.0% |
| !!! | TGTTTTGATGGAGAAGCTAA+GGG | - | chr4_1:38147416-38147435 | Msa0546440:intron | 35.0% |
| ATTACCACAACAACTACAAG+TGG | - | chr4_1:38147503-38147522 | Msa0546440:intron | 35.0% | |
| CGTAAAGCTTATCCTTCATT+CGG | + | chr4_1:38147595-38147614 | None:intergenic | 35.0% | |
| !! | GACATTTTGGCGCAATATAA+AGG | + | chr4_1:38147694-38147713 | None:intergenic | 35.0% |
| !!! | AGATTTTGAAGTCTCCCTAA+TGG | + | chr4_1:38147738-38147757 | None:intergenic | 35.0% |
| ATGGATAAGGCTTCTATCAT+TGG | - | chr4_1:38148066-38148085 | Msa0546440:intron | 35.0% | |
| ATTACAAGCCAAGAAGCTTA+AGG | - | chr4_1:38148119-38148138 | Msa0546440:intron | 35.0% | |
| !! | GCATATTGAAGCATTGTTGT+TGG | + | chr4_1:38148229-38148248 | None:intergenic | 35.0% |
| ! | ATGTTTCAAGTGGATGAAAG+AGG | - | chr4_1:38148379-38148398 | Msa0546440:CDS | 35.0% |
| ! | TGTTTCAAGTGGATGAAAGA+GGG | - | chr4_1:38148380-38148399 | Msa0546440:CDS | 35.0% |
| TAGTATGCAATAAGGGAGAA+AGG | - | chr4_1:38148416-38148435 | Msa0546440:CDS | 35.0% | |
| AGTATGCAATAAGGGAGAAA+GGG | - | chr4_1:38148417-38148436 | Msa0546440:CDS | 35.0% | |
| TAGAAAACCATCAGAAACAG+TGG | + | chr4_1:38148509-38148528 | None:intergenic | 35.0% | |
| TGAAAATAGGTGAAAGACTC+TGG | - | chr4_1:38148817-38148836 | Msa0546440:CDS | 35.0% | |
| !! | AAATTTGGCAGGTTGATTTC+TGG | + | chr4_1:38148844-38148863 | None:intergenic | 35.0% |
| ! | ACCTGCCAAATTTAAAGCTA+TGG | - | chr4_1:38148851-38148870 | Msa0546440:CDS | 35.0% |
| ! | CCTGCCAAATTTAAAGCTAT+GGG | - | chr4_1:38148852-38148871 | Msa0546440:CDS | 35.0% |
| ! | ATCAGTGCTTTTCTAAACCA+AGG | - | chr4_1:38148877-38148896 | Msa0546440:CDS | 35.0% |
| AAGGTATGAATTCAAAGCCT+TGG | + | chr4_1:38148897-38148916 | None:intergenic | 35.0% | |
| GTCATCCAGATTATCATGCA+TGG | + | chr4_1:38142187-38142206 | None:intergenic | 40.0% | |
| !! | ACTCGATTAAGGCGTTGAAT+TGG | + | chr4_1:38142219-38142238 | None:intergenic | 40.0% |
| TTCAACGCCTTAATCGAGTT+AGG | - | chr4_1:38142220-38142239 | Msa0546440:intron | 40.0% | |
| TCAACGCCTTAATCGAGTTA+GGG | - | chr4_1:38142221-38142240 | Msa0546440:intron | 40.0% | |
| TGTAGCGTTTATGTTCCTCT+GGG | + | chr4_1:38142392-38142411 | None:intergenic | 40.0% | |
| CTACAGGTTCAATCTGTTCA+AGG | - | chr4_1:38142407-38142426 | Msa0546440:intron | 40.0% | |
| CATCGAGAAAATGCAGAGAA+AGG | + | chr4_1:38142467-38142486 | None:intergenic | 40.0% | |
| ! | GACGATGAGAGTTGTCATTT+GGG | + | chr4_1:38142509-38142528 | None:intergenic | 40.0% |
| AGACGATGAGAGTTGTCATT+TGG | + | chr4_1:38142510-38142529 | None:intergenic | 40.0% | |
| AATGACAACTCTCATCGTCT+AGG | - | chr4_1:38142510-38142529 | Msa0546440:CDS | 40.0% | |
| GCAATGTATCTGCACAAGAT+TGG | - | chr4_1:38142561-38142580 | Msa0546440:CDS | 40.0% | |
| TGGGAAATTCAGTATGGTCA+TGG | + | chr4_1:38142718-38142737 | None:intergenic | 40.0% | |
| TGACCATACTGAATTTCCCA+AGG | - | chr4_1:38142718-38142737 | Msa0546440:CDS | 40.0% | |
| ACTCCTTGGGAAATTCAGTA+TGG | + | chr4_1:38142724-38142743 | None:intergenic | 40.0% | |
| ACCTCCTTGAAATACTCCTT+GGG | + | chr4_1:38142737-38142756 | None:intergenic | 40.0% | |
| AACCTCCTTGAAATACTCCT+TGG | + | chr4_1:38142738-38142757 | None:intergenic | 40.0% | |
| CAAGCATGGAAAATGTGTAC+CGG | + | chr4_1:38142811-38142830 | None:intergenic | 40.0% | |
| AGGACCAAGCATTCTTAACA+AGG | + | chr4_1:38142864-38142883 | None:intergenic | 40.0% | |
| !! | TTGAAATGAAAGTGCTCACG+GGG | + | chr4_1:38142971-38142990 | None:intergenic | 40.0% |
| !! | GTCATTGAATTTGTTGGGTG+TGG | - | chr4_1:38143119-38143138 | Msa0546440:intron | 40.0% |
| !! | AATTTGTTGGGTGTGGTTTG+TGG | - | chr4_1:38143126-38143145 | Msa0546440:intron | 40.0% |
| AGAATATGGACCACACGAAA+TGG | + | chr4_1:38143216-38143235 | None:intergenic | 40.0% | |
| ! | ATCATAAGGAAGTGTGACAG+TGG | + | chr4_1:38143264-38143283 | None:intergenic | 40.0% |
| TCAATTGAGCTAAACTCACG+GGG | + | chr4_1:38143384-38143403 | None:intergenic | 40.0% | |
| CATAACATATACAAGGTCCG+AGG | - | chr4_1:38143415-38143434 | Msa0546440:CDS | 40.0% | |
| !!! | GATTTTTTGGGTGGTGTATG+AGG | + | chr4_1:38143447-38143466 | None:intergenic | 40.0% |
| !! | AAGAGCGCTATACAAAGTCA+TGG | - | chr4_1:38143664-38143683 | Msa0546440:CDS | 40.0% |
| CCGGATATTATAGCAAGTGA+AGG | - | chr4_1:38143918-38143937 | Msa0546440:intron | 40.0% | |
| ! | CATTAGAGTGTCCCACTTTA+TGG | - | chr4_1:38144439-38144458 | Msa0546440:intron | 40.0% |
| CTCGATACCGGTAGTTAAAT+TGG | + | chr4_1:38144854-38144873 | None:intergenic | 40.0% | |
| CACATTGATCGGAAGAATTG+AGG | - | chr4_1:38145150-38145169 | Msa0546440:intron | 40.0% | |
| ! | TCACTTGTGTCATTGCTCTT+AGG | - | chr4_1:38145248-38145267 | Msa0546440:intron | 40.0% |
| GTTCATCCTTTGTATATCCG+GGG | - | chr4_1:38145450-38145469 | Msa0546440:intron | 40.0% | |
| ATACTTCCCCGGATATACAA+AGG | + | chr4_1:38145459-38145478 | None:intergenic | 40.0% | |
| !!! | CATAGTTTTAAAACCCGGCT+CGG | - | chr4_1:38145965-38145984 | Msa0546440:intron | 40.0% |
| !! | GATCGGCCATGTTTTTAAAC+CGG | - | chr4_1:38146050-38146069 | Msa0546440:intron | 40.0% |
| !! | TTCGTGCCGGTTTAAAAACA+TGG | + | chr4_1:38146059-38146078 | None:intergenic | 40.0% |
| !! | GATGACTCGGTTGTTTAACT+CGG | + | chr4_1:38146715-38146734 | None:intergenic | 40.0% |
| TTCAATCCGATTCAGTCATG+CGG | - | chr4_1:38146738-38146757 | Msa0546440:intron | 40.0% | |
| !! | ACCAGACGTTACTTGCTTTT+CGG | - | chr4_1:38146993-38147012 | Msa0546440:intron | 40.0% |
| !! | CTTGCTTTTCGGTCTAACTT+CGG | - | chr4_1:38147004-38147023 | Msa0546440:intron | 40.0% |
| ATGGGTTTGGAGGAAATGAA+AGG | + | chr4_1:38147328-38147347 | None:intergenic | 40.0% | |
| ! | TTGTGATCAAATGGGTTTGG+AGG | + | chr4_1:38147338-38147357 | None:intergenic | 40.0% |
| !! | GTTTTGATGGAGAAGCTAAG+GGG | - | chr4_1:38147417-38147436 | Msa0546440:intron | 40.0% |
| ! | TTTTGATGGAGAAGCTAAGG+GGG | - | chr4_1:38147418-38147437 | Msa0546440:intron | 40.0% |
| ! | CTAGTTGTTGTTGTTGTTGC+AGG | + | chr4_1:38147482-38147501 | None:intergenic | 40.0% |
| ATCACCACTTGTAGTTGTTG+TGG | + | chr4_1:38147510-38147529 | None:intergenic | 40.0% | |
| !! | AATTTGGCCACTGTTTCTGA+TGG | - | chr4_1:38148499-38148518 | Msa0546440:CDS | 40.0% |
| ! | GTTTTGTAGAGACGGAAAAG+TGG | + | chr4_1:38148630-38148649 | None:intergenic | 40.0% |
| !! | CCCATAGCTTTAAATTTGGC+AGG | + | chr4_1:38148855-38148874 | None:intergenic | 40.0% |
| TGTTAATCAACGCTTCCTCC+AGG | - | chr4_1:38142025-38142044 | Msa0546440:CDS | 45.0% | |
| ATACGAGAGATTCATCCTGG+AGG | + | chr4_1:38142043-38142062 | None:intergenic | 45.0% | |
| TCCAGGATGAATCTCTCGTA+TGG | - | chr4_1:38142042-38142061 | Msa0546440:CDS | 45.0% | |
| ATTGGAGAGACTCATTCTGG+AGG | + | chr4_1:38142127-38142146 | None:intergenic | 45.0% | |
| TCCAGAATGAGTCTCTCCAA+TGG | - | chr4_1:38142126-38142145 | Msa0546440:intron | 45.0% | |
| GCATGATAATCTGGATGACC+AGG | - | chr4_1:38142188-38142207 | Msa0546440:intron | 45.0% | |
| GTAGCGTTTATGTTCCTCTG+GGG | + | chr4_1:38142391-38142410 | None:intergenic | 45.0% | |
| CTGTAGCGTTTATGTTCCTC+TGG | + | chr4_1:38142393-38142412 | None:intergenic | 45.0% | |
| CAGAGGAACATAAACGCTAC+AGG | - | chr4_1:38142391-38142410 | Msa0546440:intron | 45.0% | |
| !! | TCCCAAGGAGTATTTCAAGG+AGG | - | chr4_1:38142733-38142752 | Msa0546440:CDS | 45.0% |
| AAAGTCATTGATCGGGAGTC+CGG | - | chr4_1:38142789-38142808 | Msa0546440:CDS | 45.0% | |
| ! | CGGTACACATTTTCCATGCT+TGG | - | chr4_1:38142809-38142828 | Msa0546440:CDS | 45.0% |
| CCAGAATTCTTGACCAAGCA+TGG | + | chr4_1:38142825-38142844 | None:intergenic | 45.0% | |
| CCATGCTTGGTCAAGAATTC+TGG | - | chr4_1:38142822-38142841 | Msa0546440:CDS | 45.0% | |
| TAGCAAGTGAAGGTGAAGCT+TGG | - | chr4_1:38143928-38143947 | Msa0546440:intron | 45.0% | |
| AGCAAGTGAAGGTGAAGCTT+GGG | - | chr4_1:38143929-38143948 | Msa0546440:intron | 45.0% | |
| GCAAGCTGGAACTAACGTTT+AGG | + | chr4_1:38144135-38144154 | None:intergenic | 45.0% | |
| TTGATGAGCTACATGCAAGC+TGG | + | chr4_1:38144149-38144168 | None:intergenic | 45.0% | |
| ATCTATCATCACCGACCTGA+TGG | + | chr4_1:38144624-38144643 | None:intergenic | 45.0% | |
| AGTGACCATAAAAGCAGTCC+AGG | - | chr4_1:38145498-38145517 | Msa0546440:intron | 45.0% | |
| !! | CATGTCCTGGACTGCTTTTA+TGG | + | chr4_1:38145506-38145525 | None:intergenic | 45.0% |
| ! | AATAGGTGTCATGCATGTCC+TGG | + | chr4_1:38145519-38145538 | None:intergenic | 45.0% |
| ! | GTTTTTAAACCGGCACGAAC+CGG | - | chr4_1:38146060-38146079 | Msa0546440:intron | 45.0% |
| !!! | ACTCGCCGGTTTTGATAAAC+CGG | - | chr4_1:38146115-38146134 | Msa0546440:intron | 45.0% |
| GTCTCAATTGATGTTGGCAG+CGG | - | chr4_1:38146342-38146361 | Msa0546440:intron | 45.0% | |
| ! | GTCTCAATTGTTGTTGGCAG+CGG | - | chr4_1:38146407-38146426 | Msa0546440:intron | 45.0% |
| TCGGATTGAATCGGATGACT+CGG | + | chr4_1:38146728-38146747 | None:intergenic | 45.0% | |
| !! | GGGTCATTGGTTCAACCATT+GGG | + | chr4_1:38146776-38146795 | None:intergenic | 45.0% |
| !! | TGGGTCATTGGTTCAACCAT+TGG | + | chr4_1:38146777-38146796 | None:intergenic | 45.0% |
| ACCGAAAAGCAAGTAACGTC+TGG | + | chr4_1:38146997-38147016 | None:intergenic | 45.0% | |
| ! | CATCAATTTGATTCGTGGGG+AGG | - | chr4_1:38147229-38147248 | Msa0546440:intron | 45.0% |
| ! | TGTTGTTGTTGTTGCAGGAG+AGG | + | chr4_1:38147477-38147496 | None:intergenic | 45.0% |
| CCTCTCAGAAACCAAAGTCT+TGG | + | chr4_1:38147561-38147580 | None:intergenic | 45.0% | |
| ! | CCAAGACTTTGGTTTCTGAG+AGG | - | chr4_1:38147558-38147577 | Msa0546440:intron | 45.0% |
| ! | AGACTTTGGTTTCTGAGAGG+AGG | - | chr4_1:38147561-38147580 | Msa0546440:intron | 45.0% |
| GCTTTACGCATTGCGTTCTT+TGG | - | chr4_1:38147607-38147626 | Msa0546440:intron | 45.0% | |
| AACCTCAGCCTTAAGCTTCT+TGG | + | chr4_1:38148130-38148149 | None:intergenic | 45.0% | |
| GCAGTGTCCAAAACTCATCA+AGG | - | chr4_1:38148171-38148190 | Msa0546440:intron | 45.0% | |
| ATGCAATAAGGGAGAAAGGG+TGG | - | chr4_1:38148420-38148439 | Msa0546440:CDS | 45.0% | |
| !!! | TTTTTTAATATCAATAATTT+TGG | + | chr4_1:38143326-38143345 | None:intergenic | 5.0% |
| !! | TATTTAATTATATTTATAGA+TGG | - | chr4_1:38148047-38148066 | Msa0546440:intron | 5.0% |
| GCCATACGAGAGATTCATCC+TGG | + | chr4_1:38142046-38142065 | None:intergenic | 50.0% | |
| ATTGGAGGGGATCATTCTGG+GGG | + | chr4_1:38142085-38142104 | None:intergenic | 50.0% | |
| CATTGGAGGGGATCATTCTG+GGG | + | chr4_1:38142086-38142105 | None:intergenic | 50.0% | |
| CCATTGGAGGGGATCATTCT+GGG | + | chr4_1:38142087-38142106 | None:intergenic | 50.0% | |
| ! | AGACTCATTCTGGAGGAGGA+AGG | + | chr4_1:38142120-38142139 | None:intergenic | 50.0% |
| GCCATTGGAGAGACTCATTC+TGG | + | chr4_1:38142130-38142149 | None:intergenic | 50.0% | |
| TGGCAAAACATACTCCCCAG+AGG | - | chr4_1:38142374-38142393 | Msa0546440:intron | 50.0% | |
| GCAGATACATTGCGCCATAG+TGG | + | chr4_1:38142554-38142573 | None:intergenic | 50.0% | |
| GGAACGTGGGAAACAACATG+AGG | + | chr4_1:38143195-38143214 | None:intergenic | 50.0% | |
| TTCCCACGTTCCATTTCGTG+TGG | - | chr4_1:38143203-38143222 | Msa0546440:intron | 50.0% | |
| GACCACACGAAATGGAACGT+GGG | + | chr4_1:38143208-38143227 | None:intergenic | 50.0% | |
| GGTGTATGAGGTTCGAACCT+CGG | + | chr4_1:38143435-38143454 | None:intergenic | 50.0% | |
| GCAAGTGAAGGTGAAGCTTG+GGG | - | chr4_1:38143930-38143949 | Msa0546440:intron | 50.0% | |
| !! | AATGCTCTAGTGTCGACACG+TGG | + | chr4_1:38144379-38144398 | None:intergenic | 50.0% |
| TGAGGGAAGTCTCACTGGAT+TGG | + | chr4_1:38145285-38145304 | None:intergenic | 50.0% | |
| AGCTATGAGGGAAGTCTCAC+TGG | + | chr4_1:38145290-38145309 | None:intergenic | 50.0% | |
| !!! | TTTTAAAACCCGGCTCGGAC+CGG | - | chr4_1:38145970-38145989 | Msa0546440:intron | 50.0% |
| !! | AACCGGTTCGAGCTGACTTA+CGG | - | chr4_1:38146028-38146047 | Msa0546440:intron | 50.0% |
| ATCCGTAAGTCAGCTCGAAC+CGG | + | chr4_1:38146033-38146052 | None:intergenic | 50.0% | |
| ! | GTTCGAGCTGACTTACGGAT+CGG | - | chr4_1:38146033-38146052 | Msa0546440:intron | 50.0% |
| CGGCCAAAACCGGTAAAAAC+CGG | - | chr4_1:38146090-38146109 | Msa0546440:intron | 50.0% | |
| !!! | TCGCCGGTTTTTACCGGTTT+TGG | + | chr4_1:38146096-38146115 | None:intergenic | 50.0% |
| CCGGTCCGGTTTATCAAAAC+CGG | + | chr4_1:38146123-38146142 | None:intergenic | 50.0% | |
| !! | CCGGTTTTGATAAACCGGAC+CGG | - | chr4_1:38146120-38146139 | Msa0546440:intron | 50.0% |
| !! | CGGTTTTGATAAACCGGACC+GGG | - | chr4_1:38146121-38146140 | Msa0546440:intron | 50.0% |
| GAATCAAGATTGACCCGGTC+CGG | + | chr4_1:38146137-38146156 | None:intergenic | 50.0% | |
| GTCGAACCGCATGACTGAAT+CGG | + | chr4_1:38146747-38146766 | None:intergenic | 50.0% | |
| TGGTTCAACCATTGGGTCAC+TGG | + | chr4_1:38146769-38146788 | None:intergenic | 50.0% | |
| !! | ATCGACTCGGTAAGGGTACT+GGG | + | chr4_1:38146804-38146823 | None:intergenic | 50.0% |
| !! | CGGTCTAACTTCGGATTAGC+AGG | - | chr4_1:38147013-38147032 | Msa0546440:intron | 50.0% |
| ACTCCTTACCGAGAGTCGAA+GGG | - | chr4_1:38147036-38147055 | Msa0546440:intron | 50.0% | |
| GTTCTTGACCCTTCGACTCT+CGG | + | chr4_1:38147047-38147066 | None:intergenic | 50.0% | |
| ! | CTTTGGTTTCTGAGAGGAGG+AGG | - | chr4_1:38147564-38147583 | Msa0546440:intron | 50.0% |
| AGCCAAGAAGCTTAAGGCTG+AGG | - | chr4_1:38148125-38148144 | Msa0546440:intron | 50.0% | |
| AAGCTTAAGGCTGAGGTTGC+AGG | - | chr4_1:38148132-38148151 | Msa0546440:intron | 50.0% | |
| ! | GGGATCATTCTGGGGGATGA+AGG | + | chr4_1:38142078-38142097 | None:intergenic | 55.0% |
| CCCAGAATGATCCCCTCCAA+TGG | - | chr4_1:38142084-38142103 | Msa0546440:CDS | 55.0% | |
| GCCATTGGAGGGGATCATTC+TGG | + | chr4_1:38142088-38142107 | None:intergenic | 55.0% | |
| ! | GGAGAGACTCATTCTGGAGG+AGG | + | chr4_1:38142124-38142143 | None:intergenic | 55.0% |
| TGAGCGAAGCTTCACGCCAT+TGG | + | chr4_1:38142145-38142164 | None:intergenic | 55.0% | |
| ! | GGCGTTGAATTGGTAGCACC+TGG | + | chr4_1:38142209-38142228 | None:intergenic | 55.0% |
| TCATCGTCTAGGCTGCAGCA+TGG | - | chr4_1:38142521-38142540 | Msa0546440:CDS | 55.0% | |
| AGCATGGATGAGCGCCACTA+TGG | - | chr4_1:38142537-38142556 | Msa0546440:CDS | 55.0% | |
| GGACCACACGAAATGGAACG+TGG | + | chr4_1:38143209-38143228 | None:intergenic | 55.0% | |
| TATCAAAACCGGCGAGTCGC+CGG | + | chr4_1:38146112-38146131 | None:intergenic | 55.0% | |
| !! | TGATGGGCTTCGGGTTGTCT+AGG | - | chr4_1:38146481-38146500 | Msa0546440:intron | 55.0% |
| GTACTGGGTCACTGGGTCAT+TGG | + | chr4_1:38146789-38146808 | None:intergenic | 55.0% | |
| !! | GGTAAGGGTACTGGGTCACT+GGG | + | chr4_1:38146796-38146815 | None:intergenic | 55.0% |
| !! | GATCGACTCGGTAAGGGTAC+TGG | + | chr4_1:38146805-38146824 | None:intergenic | 55.0% |
| ACCCTTACCGAGTCGATCAC+CGG | - | chr4_1:38146807-38146826 | Msa0546440:intron | 55.0% | |
| !! | ACCGGTGATCGACTCGGTAA+GGG | + | chr4_1:38146811-38146830 | None:intergenic | 55.0% |
| GACTCCTTACCGAGAGTCGA+AGG | - | chr4_1:38147035-38147054 | Msa0546440:intron | 55.0% | |
| TGACCCTTCGACTCTCGGTA+AGG | + | chr4_1:38147042-38147061 | None:intergenic | 55.0% | |
| ! | GAAGCGTCACGCCATTGGAG+GGG | + | chr4_1:38142098-38142117 | None:intergenic | 60.0% |
| !! | GGAAGCGTCACGCCATTGGA+GGG | + | chr4_1:38142099-38142118 | None:intergenic | 60.0% |
| !! | AGGAAGCGTCACGCCATTGG+AGG | + | chr4_1:38142100-38142119 | None:intergenic | 60.0% |
| !! | GGAAGGAAGCGTCACGCCAT+TGG | + | chr4_1:38142103-38142122 | None:intergenic | 60.0% |
| TAAACCGGCACGAACCGGTG+TGG | - | chr4_1:38146065-38146084 | Msa0546440:intron | 60.0% | |
| !!! | GGCGAGTCGCCGGTTTTTAC+CGG | + | chr4_1:38146102-38146121 | None:intergenic | 60.0% |
| GGTAAAAACCGGCGACTCGC+CGG | - | chr4_1:38146101-38146120 | Msa0546440:intron | 60.0% | |
| CGGTTCGACCAGTGACCCAA+TGG | - | chr4_1:38146758-38146777 | Msa0546440:intron | 60.0% | |
| !! | CGGTAAGGGTACTGGGTCAC+TGG | + | chr4_1:38146797-38146816 | None:intergenic | 60.0% |
| !! | GACCGGTGATCGACTCGGTA+AGG | + | chr4_1:38146812-38146831 | None:intergenic | 60.0% |
| ACTCGGACCGGTGATCGACT+CGG | + | chr4_1:38146817-38146836 | None:intergenic | 60.0% | |
| GAGGAGGCGAAGCCGAATGA+AGG | - | chr4_1:38147580-38147599 | Msa0546440:intron | 60.0% | |
| GAACCGGTCCGACCGTGAAC+CGG | - | chr4_1:38145999-38146018 | Msa0546440:intron | 65.0% | |
| !! | CGGTTTTGGCCGAGCCACAC+CGG | + | chr4_1:38146082-38146101 | None:intergenic | 65.0% |
| ! | CGGTGTGGCTCGGCCAAAAC+CGG | - | chr4_1:38146080-38146099 | Msa0546440:intron | 65.0% |
| !! | AAAACCCGGCTCGGACCGGC+CGG | - | chr4_1:38145974-38145993 | Msa0546440:intron | 70.0% |
| !! | CACGGTCGGACCGGTTCGAC+CGG | + | chr4_1:38145996-38146015 | None:intergenic | 70.0% |
| !! | CGAGCCACACCGGTTCGTGC+CGG | + | chr4_1:38146072-38146091 | None:intergenic | 70.0% |
| CGGCACGAACCGGTGTGGCT+CGG | - | chr4_1:38146070-38146089 | Msa0546440:intron | 70.0% | |
| TTCGACCGGCCGGTCCGAGC+CGG | + | chr4_1:38145982-38146001 | None:intergenic | 75.0% | |
| CTCGGACCGGCCGGTCGAAC+CGG | - | chr4_1:38145983-38146002 | Msa0546440:intron | 75.0% | |
| !! | GTCGGACCGGTTCGACCGGC+CGG | + | chr4_1:38145992-38146011 | None:intergenic | 75.0% |
| ! | TCGACCGGCCGGTCCGAGCC+GGG | + | chr4_1:38145981-38146000 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 38142024 | 38148930 | 38142024 | ID=Msa0546440;Name=Msa0546440 |
| chr4_1 | mRNA | 38142024 | 38148930 | 38142024 | ID=Msa0546440-mRNA-1;Parent=Msa0546440;Name=Msa0546440-mRNA-1;_AED=0.25;_eAED=0.26;_QI=0|0|0|1|1|1|5|0|531 |
| chr4_1 | exon | 38148250 | 38148930 | 38148250 | ID=Msa0546440-mRNA-1:exon:9743;Parent=Msa0546440-mRNA-1 |
| chr4_1 | exon | 38143308 | 38143745 | 38143308 | ID=Msa0546440-mRNA-1:exon:9742;Parent=Msa0546440-mRNA-1 |
| chr4_1 | exon | 38142691 | 38142888 | 38142691 | ID=Msa0546440-mRNA-1:exon:9741;Parent=Msa0546440-mRNA-1 |
| chr4_1 | exon | 38142408 | 38142581 | 38142408 | ID=Msa0546440-mRNA-1:exon:9740;Parent=Msa0546440-mRNA-1 |
| chr4_1 | exon | 38142024 | 38142128 | 38142024 | ID=Msa0546440-mRNA-1:exon:9739;Parent=Msa0546440-mRNA-1 |
| chr4_1 | CDS | 38148250 | 38148930 | 38148250 | ID=Msa0546440-mRNA-1:cds;Parent=Msa0546440-mRNA-1 |
| chr4_1 | CDS | 38143308 | 38143745 | 38143308 | ID=Msa0546440-mRNA-1:cds;Parent=Msa0546440-mRNA-1 |
| chr4_1 | CDS | 38142691 | 38142888 | 38142691 | ID=Msa0546440-mRNA-1:cds;Parent=Msa0546440-mRNA-1 |
| chr4_1 | CDS | 38142408 | 38142581 | 38142408 | ID=Msa0546440-mRNA-1:cds;Parent=Msa0546440-mRNA-1 |
| chr4_1 | CDS | 38142024 | 38142128 | 38142024 | ID=Msa0546440-mRNA-1:cds;Parent=Msa0546440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
