AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0553880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553880 MtrunA17_Chr4g0039741 92.655 354 3 2 1 343 1 342 0.0 660
Msa0553880 MtrunA17_Chr4g0039751 78.771 358 47 5 1 343 1 344 0.0 560
Msa0553880 MtrunA17_Chr7g0269641 62.827 191 50 5 21 197 2 185 2.69e-68 212
Msa0553880 MtrunA17_Chr7g0269651 65.432 81 26 1 256 336 1 79 1.53e-26 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553880 AT5G03415.1 59.299 371 90 10 21 343 28 385 2.15e-132 383
Msa0553880 AT5G03415.2 57.412 371 91 11 21 343 28 379 2.26e-124 362
Msa0553880 AT5G02470.3 46.957 230 90 5 63 280 32 241 3.24e-65 208
Msa0553880 AT5G02470.1 46.957 230 90 5 63 280 32 241 3.24e-65 208
Msa0553880 AT5G02470.2 46.957 230 90 5 63 280 32 241 3.24e-65 208

Find 172 sgRNAs with CRISPR-Local

Find 833 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATATATTGGTTGGTATT+TGG 0.123531 4_1:+51182150 Msa0553880:three_prime_UTR
ATGTACAGACATGCTTAATT+AGG 0.206763 4_1:-51187333 None:intergenic
GTTCTCAAGGCAATGGATTT+TGG 0.207282 4_1:+51181577 Msa0553880:CDS
TTCGGGATTCACTAATTTAC+AGG 0.232522 4_1:+51182091 Msa0553880:three_prime_UTR
GGTTACATCAAAATAAATTT+AGG 0.241332 4_1:+51176731 Msa0553880:five_prime_UTR
CTGTTTGTTTCTTTATCGTT+TGG 0.245613 4_1:+51181915 Msa0553880:three_prime_UTR
TGTTTGTTTCTTTATCGTTT+GGG 0.268735 4_1:+51181916 Msa0553880:three_prime_UTR
TCCACTCCCTGGAATATTAA+AGG 0.271571 4_1:+51181738 Msa0553880:CDS
CGTTTGCCTCTTTATTGTTT+AGG 0.272662 4_1:+51187447 Msa0553880:three_prime_UTR
GGATTAACGGCGGCGGTTAT+TGG 0.275812 4_1:-51176809 None:intergenic
TATGGATATATACTATATAT+TGG 0.278344 4_1:+51182139 Msa0553880:three_prime_UTR
GGTTGTGGAACTACGCTTTC+CGG 0.284948 4_1:+51177051 Msa0553880:CDS
TATTATTGCTACAAGTTTGT+AGG 0.286595 4_1:+51180586 Msa0553880:CDS
TGTCCTGTTGCTTGTGTTGT+TGG 0.290846 4_1:+51182189 Msa0553880:three_prime_UTR
ATTGTTCATTTCGTTGAATA+AGG 0.299922 4_1:-51180618 None:intergenic
TTACAAATTACACTGTAAAT+CGG 0.306471 4_1:-51187618 None:intergenic
TATACCTGAACCAGAATAAA+AGG 0.312486 4_1:-51180682 None:intergenic
TAAATGTAGTAAATGATAAA+TGG 0.318350 4_1:-51181963 None:intergenic
TATACAACATAGGTTACTTT+CGG 0.325008 4_1:+51182073 Msa0553880:three_prime_UTR
TGGTGGTTTGTCACCTGATC+AGG 0.329605 4_1:+51179879 Msa0553880:CDS
ATACAACATAGGTTACTTTC+GGG 0.332484 4_1:+51182074 Msa0553880:three_prime_UTR
TTGGCGGATGCAAACGATTA+AGG 0.332815 4_1:+51176690 None:intergenic
ACTCTTGCCTTTAATATTCC+AGG 0.333887 4_1:-51181745 None:intergenic
TGATGCTCTGAATGTTCTTA+TGG 0.333958 4_1:+51180045 Msa0553880:CDS
TACAAATTACACTGTAAATC+GGG 0.337435 4_1:-51187617 None:intergenic
AACCTTTCATACTAAATTGC+CGG 0.339281 4_1:-51178066 None:intergenic
TCCTGCTCGTTGAGCCTGAT+TGG 0.340052 4_1:-51177074 None:intergenic
AATCACAAAGGTATATTGAT+TGG 0.351466 4_1:-51187373 None:intergenic
CAGTTTCAAACATGTTAGTT+AGG 0.354238 4_1:+51181701 Msa0553880:CDS
TGAAATTAATCCTATGTTGT+TGG 0.359723 4_1:-51187588 None:intergenic
AAATGACTTGTCTGTATTGA+TGG 0.366464 4_1:-51187401 None:intergenic
CGAAGAGGACGAGGAATTGA+TGG 0.402627 4_1:+51177029 Msa0553880:CDS
ACTACGCTTTCCGGCCAATC+AGG 0.405110 4_1:+51177060 Msa0553880:CDS
GAGAATCAGTTGTAATAAAT+CGG 0.409087 4_1:+51182045 Msa0553880:three_prime_UTR
TATTATGAAGGTCTATAATT+CGG 0.409699 4_1:-51181849 None:intergenic
ATACCAACAACACAAGCAAC+AGG 0.415272 4_1:-51182192 None:intergenic
AGAGAGAGGTGAGGTTGTGA+TGG 0.419891 4_1:-51176830 None:intergenic
TTAAATAGACACAGCGTCTT+GGG 0.420475 4_1:+51180246 Msa0553880:intron
ATCAATACAGACAAGTCATT+TGG 0.422322 4_1:+51187403 Msa0553880:three_prime_UTR
GAGGGAAAGAGGGGAACGCG+GGG 0.424429 4_1:-51176785 None:intergenic
TGTACAGACATGCTTAATTA+GGG 0.426762 4_1:-51187332 None:intergenic
GGCTCAACGAGCAGGAGTGC+CGG 0.432075 4_1:+51177081 Msa0553880:CDS
GCCTTTAATATTCCAGGGAG+TGG 0.432840 4_1:-51181739 None:intergenic
GAAAGTAACCTATGTTGTAT+AGG 0.443564 4_1:-51182071 None:intergenic
TCTGCCAAGGTAGTAATTGA+TGG 0.444466 4_1:-51187490 None:intergenic
ATCACAAAGGTATATTGATT+GGG 0.447847 4_1:-51187372 None:intergenic
AGACACAGCGTCTTGGGCTT+AGG 0.448668 4_1:+51180252 Msa0553880:intron
GAAGATAAGAAAACCTGATC+AGG 0.449970 4_1:-51179892 None:intergenic
CTTTATCGTTTGGGGTAGAC+TGG 0.450774 4_1:+51181925 Msa0553880:three_prime_UTR
GCGAGGGAAAGAGGGGAACG+CGG 0.452946 4_1:-51176787 None:intergenic
TCCTCATGCAACTGTGGAAG+TGG 0.457569 4_1:+51181208 Msa0553880:CDS
GTTAGTCATCAGTACAGCTT+TGG 0.461202 4_1:+51181872 Msa0553880:three_prime_UTR
CGGTTATTGGCGAGGGAAAG+AGG 0.463159 4_1:-51176796 None:intergenic
ATTAAATAGACACAGCGTCT+TGG 0.463317 4_1:+51180245 Msa0553880:intron
GATATATACTATATATTGGT+TGG 0.464111 4_1:+51182143 Msa0553880:three_prime_UTR
GCCAATCAGGCTCAACGAGC+AGG 0.466675 4_1:+51177073 Msa0553880:CDS
GGGGAAGGTTCTAGCATGTC+AGG 0.468504 4_1:+51181652 Msa0553880:CDS
AGACTCACGCAACTACTGCC+TGG 0.468595 4_1:-51177206 None:intergenic
GCTAGAGAGATCAGAGATCA+TGG 0.468871 4_1:+51187557 Msa0553880:three_prime_UTR
GACGAGGAATTGATGGGTTG+TGG 0.469944 4_1:+51177036 Msa0553880:CDS
AGGAGTTATGCAGGTAGGAT+AGG 0.472242 4_1:+51176710 Msa0553880:five_prime_UTR
GGCTATGGATATTATTTCCA+AGG 0.477616 4_1:+51180066 Msa0553880:CDS
AGGTAAAGATACACCTCCAC+TGG 0.479385 4_1:-51180662 None:intergenic
CTGCTCAAGCTCCTGCAGAT+AGG 0.480130 4_1:-51180297 None:intergenic
GAGTGATATTGAAGAACTAA+AGG 0.483152 4_1:+51180132 Msa0553880:CDS
GTGAGGTTGTGATGGATTAA+CGG 0.484963 4_1:-51176822 None:intergenic
GCTCAACGAGCAGGAGTGCC+GGG 0.485828 4_1:+51177082 Msa0553880:CDS
CTCCGGCAATTTAGTATGAA+AGG 0.485877 4_1:+51178064 Msa0553880:CDS
ATCTTCATATTGCGTGCCCT+AGG 0.486421 4_1:+51176915 Msa0553880:five_prime_UTR
GCTCGTTGAGCCTGATTGGC+CGG 0.490544 4_1:-51177070 None:intergenic
CGAGGGAAAGAGGGGAACGC+GGG 0.497120 4_1:-51176786 None:intergenic
AGGGAAAGAGGGGAACGCGG+GGG 0.497993 4_1:-51176784 None:intergenic
AATGAACAATTATATAGCTC+AGG 0.501710 4_1:+51180631 Msa0553880:CDS
TATACAGACATGCTTAAGTA+AGG 0.506147 4_1:-51181809 None:intergenic
AGCCGGAGTGAGCAGACCAC+GGG 0.509849 4_1:+51177114 Msa0553880:CDS
GACTCACGCAACTACTGCCT+GGG 0.512394 4_1:-51177205 None:intergenic
ATAAGAATGGAAGAGGGCTC+CGG 0.512718 4_1:+51178047 Msa0553880:CDS
AAATCGAAACTGCTCACTAC+AGG 0.513325 4_1:+51176974 Msa0553880:five_prime_UTR
GTCCGTGGACGAAGAGGACG+AGG 0.514783 4_1:+51177020 Msa0553880:CDS
GGTGACAAACCACCATTGCT+TGG 0.514952 4_1:-51179871 None:intergenic
CTCTTGCCTTTAATATTCCA+GGG 0.515553 4_1:-51181744 None:intergenic
ACTGATTCTCTCTTACTACA+TGG 0.516286 4_1:-51182032 None:intergenic
TGATACAAAACAAGATGCAT+TGG 0.516748 4_1:-51187681 None:intergenic
TGATGACGATGCTGCTTCCC+AGG 0.519370 4_1:+51177188 Msa0553880:CDS
CAATTATGTTCTCAAGGCAA+TGG 0.525211 4_1:+51181570 Msa0553880:CDS
CCATCCATCAATTACTACCT+TGG 0.526291 4_1:+51187486 Msa0553880:three_prime_UTR
CCGACATCACCTCCACTCCC+TGG 0.527073 4_1:+51181727 Msa0553880:CDS
TTCCTCGTCCTCTTCGTCCA+CGG 0.529381 4_1:-51177022 None:intergenic
GTCTAACCTAAACAATAAAG+AGG 0.536603 4_1:-51187453 None:intergenic
TCTGAATGTTCTTATGGCTA+TGG 0.537791 4_1:+51180051 Msa0553880:CDS
ACTTATGTGGATATTAGTTG+TGG 0.538450 4_1:+51187650 Msa0553880:three_prime_UTR
TTGGTAGGTCAGCAGCAGCT+TGG 0.538837 4_1:+51187422 Msa0553880:three_prime_UTR
GGTTATTGGCGAGGGAAAGA+GGG 0.540838 4_1:-51176795 None:intergenic
TCTTCATATTGCGTGCCCTA+GGG 0.545276 4_1:+51176916 Msa0553880:five_prime_UTR
CTAAACAATAAAGAGGCAAA+CGG 0.550320 4_1:-51187446 None:intergenic
CTGATTCTCTCTTACTACAT+GGG 0.550977 4_1:-51182031 None:intergenic
GTCAGGCATGTATCAATCAC+AGG 0.555543 4_1:+51181669 Msa0553880:CDS
GTTTGTTTCTTTATCGTTTG+GGG 0.556298 4_1:+51181917 Msa0553880:three_prime_UTR
ACAGGACAAGCAAGATGCAT+TGG 0.558929 4_1:-51182174 None:intergenic
TTGTCGTCATGCAGCTCGAA+AGG 0.559999 4_1:-51181550 None:intergenic
CACACAATATTGCGGATGGA+GGG 0.564114 4_1:+51181632 Msa0553880:CDS
CGAAACTGCTCACTACAGGA+TGG 0.565458 4_1:+51176978 Msa0553880:exon
GGCTTAGGAGTAGAATTGAA+AGG 0.565800 4_1:+51180267 Msa0553880:CDS
TTTAATATTCCAGGGAGTGG+AGG 0.566833 4_1:-51181736 None:intergenic
TGTAGTAAATGATAAATGGT+AGG 0.568227 4_1:-51181959 None:intergenic
ACGGCGGCGGTTATTGGCGA+GGG 0.568625 4_1:-51176803 None:intergenic
GTCTGCTCACTCCGGCTAGA+CGG 0.569869 4_1:-51177108 None:intergenic
TTTGAGAGCAGCGTTATCAC+CGG 0.570401 4_1:-51177145 None:intergenic
CAGACCACGGGGACAGCCGC+CGG 0.573222 4_1:+51177126 Msa0553880:CDS
GTGCCGGGTTACCGTCTAGC+CGG 0.573556 4_1:+51177097 Msa0553880:CDS
AAGGAAAGCAGCCTATCTGC+AGG 0.574961 4_1:+51180286 Msa0553880:CDS
AATATTGCGGATGGAGGGGA+AGG 0.575401 4_1:+51181637 Msa0553880:CDS
TTCTTCAATATCACTCAGAC+TGG 0.575701 4_1:-51180125 None:intergenic
TAGGGCACGCAATATGAAGA+TGG 0.575858 4_1:-51176913 None:intergenic
CTGATGACTAACTATTATGA+AGG 0.576595 4_1:-51181861 None:intergenic
AACGGCGGCGGTTATTGGCG+AGG 0.576830 4_1:-51176804 None:intergenic
CCAGGGAGTGGAGGTGATGT+CGG 0.580031 4_1:-51181727 None:intergenic
GGAATGGAGTCCAACAACAT+AGG 0.581085 4_1:+51187578 Msa0553880:three_prime_UTR
AAACGATTAAGGAGTTATGC+AGG 0.583256 4_1:+51176701 None:intergenic
ACACAATATTGCGGATGGAG+GGG 0.585147 4_1:+51181633 Msa0553880:CDS
AGAGATCAGAGATCATGGAA+TGG 0.587031 4_1:+51187562 Msa0553880:three_prime_UTR
CCAAGGTAGTAATTGATGGA+TGG 0.596183 4_1:-51187486 None:intergenic
CATTTGATAGGGTCCTTGTG+AGG 0.596609 4_1:+51187702 Msa0553880:three_prime_UTR
ACAAATTACACTGTAAATCG+GGG 0.598164 4_1:-51187616 None:intergenic
TCCCCGTGGTCTGCTCACTC+CGG 0.599110 4_1:-51177116 None:intergenic
ACACACAATATTGCGGATGG+AGG 0.602906 4_1:+51181631 Msa0553880:CDS
GAAGAGGACGAGGAATTGAT+GGG 0.603441 4_1:+51177030 Msa0553880:CDS
CTAAATTGATCGAAAACGAA+GGG 0.603489 4_1:-51176946 None:intergenic
TGATTCTCTCTTACTACATG+GGG 0.605747 4_1:-51182030 None:intergenic
TTCTCTCTTACTACATGGGG+GGG 0.606444 4_1:-51182027 None:intergenic
GATCTCTCTAGCTACAATGC+GGG 0.606530 4_1:-51187546 None:intergenic
TGACGACAATTATGTTCTCA+AGG 0.607641 4_1:+51181564 Msa0553880:CDS
GAAACTGCTCACTACAGGAT+GGG 0.608587 4_1:+51176979 Msa0553880:exon
TCCACTTCCACAGTTGCATG+AGG 0.608745 4_1:-51181209 None:intergenic
TCTAAATTGATCGAAAACGA+AGG 0.611313 4_1:-51176947 None:intergenic
GTCATCAGTACAGCTTTGGT+AGG 0.613336 4_1:+51181876 Msa0553880:three_prime_UTR
GTTACACACAATATTGCGGA+TGG 0.615879 4_1:+51181628 Msa0553880:CDS
TCGGGATTCACTAATTTACA+GGG 0.619569 4_1:+51182092 Msa0553880:three_prime_UTR
TCAGTCGTCCGTGGACGAAG+AGG 0.625449 4_1:+51177014 Msa0553880:CDS
ATTCTCTCTTACTACATGGG+GGG 0.628295 4_1:-51182028 None:intergenic
GGGAGTGGAGGTGATGTCGG+AGG 0.628434 4_1:-51181724 None:intergenic
TTGTGATGGATTAACGGCGG+CGG 0.630350 4_1:-51176816 None:intergenic
GTTATTGGCGAGGGAAAGAG+GGG 0.630880 4_1:-51176794 None:intergenic
ATCGGTAACCTATACAACAT+AGG 0.634392 4_1:+51182063 Msa0553880:three_prime_UTR
ATGGACAGTACGAAACGGAA+GGG 0.638006 4_1:-51182224 None:intergenic
CAATGTTACACACAATATTG+CGG 0.641067 4_1:+51181624 Msa0553880:CDS
TCAGGAAATCCTCCCAGTGG+AGG 0.644133 4_1:+51180649 Msa0553880:CDS
GCAGCCGCATCAGTCGTCCG+TGG 0.645760 4_1:+51177005 Msa0553880:CDS
ATACAGACAAGTCATTTGGT+AGG 0.648893 4_1:+51187407 Msa0553880:three_prime_UTR
GACACGTCCTCATGCAACTG+TGG 0.649899 4_1:+51181202 Msa0553880:intron
TAGCCGGAGTGAGCAGACCA+CGG 0.651050 4_1:+51177113 Msa0553880:CDS
TGTGTAACATTGTCACTCTG+TGG 0.651492 4_1:-51181613 None:intergenic
GGTCCTTGTGAGGCTCTCTG+TGG 0.654225 4_1:+51187712 Msa0553880:three_prime_UTR
ATCACCGGCGGCTGTCCCCG+TGG 0.656058 4_1:-51177130 None:intergenic
ACTCCGGCTAGACGGTAACC+CGG 0.657214 4_1:-51177100 None:intergenic
TCGTCCACGGACGACTGATG+CGG 0.668028 4_1:-51177009 None:intergenic
GATTAAGGAGTTATGCAGGT+AGG 0.669074 4_1:+51176705 Msa0553880:five_prime_UTR
GAGCATCATAGACCCTTCGA+CGG 0.678223 4_1:-51180030 None:intergenic
GGTAAAGATACACCTCCACT+GGG 0.679973 4_1:-51180661 None:intergenic
AGACCACAGAGAGCCTCACA+AGG 0.680730 4_1:-51187715 None:intergenic
AGCTCAGGAAATCCTCCCAG+TGG 0.682103 4_1:+51180646 Msa0553880:CDS
TTGATGGCTAACAATCACAA+AGG 0.688839 4_1:-51187385 None:intergenic
ATAGGTGGCAGATGAACTTG+TGG 0.689893 4_1:+51179834 Msa0553880:intron
GATTCTCTCTTACTACATGG+GGG 0.691269 4_1:-51182029 None:intergenic
AACATGTTTGAAACTGACTG+AGG 0.695881 4_1:-51181694 None:intergenic
GAGAGCAGCGTTATCACCGG+CGG 0.697043 4_1:-51177142 None:intergenic
TGATCTCTCTAGCTACAATG+CGG 0.705794 4_1:-51187547 None:intergenic
GGGGTGATAAGAATGGAAGA+GGG 0.716134 4_1:+51178041 Msa0553880:CDS
AAAGATACACCTCCACTGGG+AGG 0.724160 4_1:-51180658 None:intergenic
ATATCACTCAGACTGGTACG+AGG 0.734989 4_1:-51180118 None:intergenic
GCCGGAGTGAGCAGACCACG+GGG 0.739516 4_1:+51177115 Msa0553880:CDS
AGGTTGTGATGGATTAACGG+CGG 0.753458 4_1:-51176819 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAAAAAAAAAAAATT+AGG - chr4_1:51179800-51179819 None:intergenic 0.0%
!! AAAAAAAAAAATAAAAATAT+AGG + chr4_1:51179816-51179835 Msa0553880:intron 0.0%
!! AAGTATAGATATAAATAAAA+AGG - chr4_1:51177900-51177919 None:intergenic 10.0%
!! GAAAAAAAATATAAGTAATA+CGG - chr4_1:51179755-51179774 None:intergenic 10.0%
!! AAAAAAAAAATTAGGAAATA+AGG - chr4_1:51179792-51179811 None:intergenic 10.0%
!! AAAAAAAATAAAAATATAGG+TGG + chr4_1:51179819-51179838 Msa0553880:intron 10.0%
!! AAACTTAAAACTAAAAAATA+GGG + chr4_1:51182365-51182384 Msa0553880:intron 10.0%
!! TAAAAATATATTATTAGAGT+TGG + chr4_1:51183139-51183158 Msa0553880:intron 10.0%
!!! TTTAATAAAAGTATCTATTA+AGG + chr4_1:51184339-51184358 Msa0553880:intron 10.0%
!!! TTTCAAATAAAATATTTTAC+CGG - chr4_1:51184758-51184777 None:intergenic 10.0%
!! ATATTAAATATATTCTGAAT+AGG - chr4_1:51185899-51185918 None:intergenic 10.0%
!! TATTCAGAATATATTTAATA+TGG + chr4_1:51185898-51185917 Msa0553880:intron 10.0%
!! ATTCAGAATATATTTAATAT+GGG + chr4_1:51185899-51185918 Msa0553880:intron 10.0%
!! AAATTAATTAGTGGTTAATT+TGG + chr4_1:51177757-51177776 Msa0553880:intron 15.0%
!! TTATTTATATCTATACTTTG+TGG + chr4_1:51177902-51177921 Msa0553880:intron 15.0%
!! TAATTAACTTATTTACTGAA+AGG + chr4_1:51178384-51178403 Msa0553880:intron 15.0%
!!! TAGAAATGATAAGATTTTTA+AGG + chr4_1:51178920-51178939 Msa0553880:intron 15.0%
!!! AGAAATGATAAGATTTTTAA+GGG + chr4_1:51178921-51178940 Msa0553880:intron 15.0%
!!! TTTTAAGGGTATTATTTATA+TGG + chr4_1:51178935-51178954 Msa0553880:intron 15.0%
!!! ACCAATTTTTTTTTTTGAAA+TGG - chr4_1:51179609-51179628 None:intergenic 15.0%
!!! ATCTTATGAACTTATTTTTT+TGG + chr4_1:51179965-51179984 Msa0553880:intron 15.0%
!!! TCTTATGAACTTATTTTTTT+GGG + chr4_1:51179966-51179985 Msa0553880:intron 15.0%
!! TAAATGTAGTAAATGATAAA+TGG - chr4_1:51181966-51181985 None:intergenic 15.0%
!! TATGGATATATACTATATAT+TGG + chr4_1:51182139-51182158 Msa0553880:three_prime_UTR 15.0%
!! CAAACTTAAAACTAAAAAAT+AGG + chr4_1:51182364-51182383 Msa0553880:intron 15.0%
!!! ATGTTTTAAAAATTTGATCA+TGG - chr4_1:51182597-51182616 None:intergenic 15.0%
!!! TAGTCAAAACATTTTATATA+TGG + chr4_1:51182625-51182644 Msa0553880:intron 15.0%
!!! TTTTATTACTTTTTTAAACG+TGG + chr4_1:51184539-51184558 Msa0553880:intron 15.0%
!!! TTTATTACTTTTTTAAACGT+GGG + chr4_1:51184540-51184559 Msa0553880:intron 15.0%
!! TGATCATGATAATTATTATT+GGG + chr4_1:51185224-51185243 Msa0553880:intron 15.0%
!!! TATTATTTCTAAGGATAAAA+AGG + chr4_1:51185610-51185629 Msa0553880:intron 15.0%
!! ATCAAATTAAGCAATTAAAA+TGG - chr4_1:51185790-51185809 None:intergenic 15.0%
!!! TTGTTCATTTTGATTTTAAT+AGG + chr4_1:51186774-51186793 Msa0553880:intron 15.0%
!! GGTTACATCAAAATAAATTT+AGG + chr4_1:51176731-51176750 Msa0553880:five_prime_UTR 20.0%
!!! AAGATTTTCAATTAGTGAAA+AGG + chr4_1:51177401-51177420 Msa0553880:intron 20.0%
!! TTTATTCAAGGTCTAAAAAA+TGG + chr4_1:51177476-51177495 Msa0553880:intron 20.0%
!! TTAAAACCTGAATTAATTAG+TGG + chr4_1:51177647-51177666 Msa0553880:intron 20.0%
!! AATTAACCACTAATTAATTC+AGG - chr4_1:51177656-51177675 None:intergenic 20.0%
!! GAATTAATTAGTGGTTAATT+TGG + chr4_1:51177656-51177675 Msa0553880:intron 20.0%
!! TTCATTGCAAAATTAATTAG+TGG + chr4_1:51177748-51177767 Msa0553880:intron 20.0%
!! TAAGAATCAATCGAAAATAA+TGG - chr4_1:51177972-51177991 None:intergenic 20.0%
!! TAAAAAGTTAAAGATCAAAG+TGG - chr4_1:51178111-51178130 None:intergenic 20.0%
!! AATCAACAATAAATTAGAGA+GGG - chr4_1:51178545-51178564 None:intergenic 20.0%
!! AAATCAACAATAAATTAGAG+AGG - chr4_1:51178546-51178565 None:intergenic 20.0%
!!! AAAAAACTGGTTTAAAGTAA+AGG - chr4_1:51178626-51178645 None:intergenic 20.0%
!! TTCTATAAATACATACATGT+TGG + chr4_1:51178768-51178787 Msa0553880:intron 20.0%
!! TAGAAACAAAAATGTCAAAA+AGG + chr4_1:51178851-51178870 Msa0553880:intron 20.0%
!! AGAAACAAAAATGTCAAAAA+GGG + chr4_1:51178852-51178871 Msa0553880:intron 20.0%
!! GCCATTTCAAAAAAAAAAAT+TGG + chr4_1:51179605-51179624 Msa0553880:intron 20.0%
!!! TATTTGCTATTTACACATTA+AGG + chr4_1:51179932-51179951 Msa0553880:intron 20.0%
!!! CTTATGAACTTATTTTTTTG+GGG + chr4_1:51179967-51179986 Msa0553880:intron 20.0%
!!! TTGTATTTCTTTTTTATCCT+TGG - chr4_1:51180086-51180105 None:intergenic 20.0%
!! AGGATAAAAAAGAAATACAA+TGG + chr4_1:51180086-51180105 Msa0553880:CDS 20.0%
!! TAAAAAAGAAATACAATGGA+AGG + chr4_1:51180090-51180109 Msa0553880:CDS 20.0%
!! AAAAAAGAAATACAATGGAA+GGG + chr4_1:51180091-51180110 Msa0553880:CDS 20.0%
!! AATTTAAAAAATAGCAATCC+AGG - chr4_1:51180369-51180388 None:intergenic 20.0%
!! ATGTAATATATTATCATCCA+AGG - chr4_1:51180771-51180790 None:intergenic 20.0%
!!! AGAAATAATTTTCCCTTTTT+TGG + chr4_1:51180920-51180939 Msa0553880:intron 20.0%
!!! GAAATAATTTTCCCTTTTTT+GGG + chr4_1:51180921-51180940 Msa0553880:intron 20.0%
!!! TTGTTCATTTTGATTTCAAT+AGG + chr4_1:51181252-51181271 Msa0553880:CDS 20.0%
!! TATTATGAAGGTCTATAATT+CGG - chr4_1:51181852-51181871 None:intergenic 20.0%
!! GATATATACTATATATTGGT+TGG + chr4_1:51182143-51182162 Msa0553880:three_prime_UTR 20.0%
!! ATTTCGATGATAAACTAATA+TGG - chr4_1:51182246-51182265 None:intergenic 20.0%
!! ATTAAATCATCTTGATATAC+AGG + chr4_1:51183630-51183649 Msa0553880:intron 20.0%
!! GTTTAATATGTAAAGATAGT+GGG - chr4_1:51184426-51184445 None:intergenic 20.0%
!! TGTTTAATATGTAAAGATAG+TGG - chr4_1:51184427-51184446 None:intergenic 20.0%
!! AAATAGAGATTAATATTGTG+AGG + chr4_1:51184978-51184997 Msa0553880:intron 20.0%
!!! ATAATTATCATGATAGCTTT+TGG + chr4_1:51185192-51185211 Msa0553880:intron 20.0%
!!! TAATTATCATGATAGCTTTT+GGG + chr4_1:51185193-51185212 Msa0553880:intron 20.0%
!! GTGATCATGATAATTATTAT+TGG + chr4_1:51185223-51185242 Msa0553880:intron 20.0%
!! TTAAAGTCAAGAAATAAACT+GGG - chr4_1:51185341-51185360 None:intergenic 20.0%
!! ATTAAAGTCAAGAAATAAAC+TGG - chr4_1:51185342-51185361 None:intergenic 20.0%
!!! ATGTGATTGTTTTATATTGT+AGG + chr4_1:51185360-51185379 Msa0553880:intron 20.0%
!!! ACTATATCTGAAATTTTGAA+TGG - chr4_1:51185473-51185492 None:intergenic 20.0%
!! TAAATATATTCTGAATAGGA+TGG - chr4_1:51185895-51185914 None:intergenic 20.0%
!! ATTGTTCATTTCGTTTAATA+AGG - chr4_1:51186043-51186062 None:intergenic 20.0%
!!! AAATATTTTATCAGCTCATT+TGG + chr4_1:51186496-51186515 Msa0553880:intron 20.0%
!!! TTTTATGACACTACTTAATT+AGG - chr4_1:51186886-51186905 None:intergenic 20.0%
!! AAAAGAGAGTAAACATAAAT+AGG - chr4_1:51187043-51187062 None:intergenic 20.0%
!! TTACAAATTACACTGTAAAT+CGG - chr4_1:51187621-51187640 None:intergenic 20.0%
!!! TTGTTTTGTATCATTTGATA+GGG + chr4_1:51187691-51187710 Msa0553880:three_prime_UTR 20.0%
! TATAAATCCGATTTCATGTT+TGG + chr4_1:51177294-51177313 Msa0553880:intron 25.0%
!!! ATGCGTTCAATTTTGATTTA+GGG + chr4_1:51177366-51177385 Msa0553880:intron 25.0%
! TGAAAAGGAAAATGATATAC+TGG + chr4_1:51177416-51177435 Msa0553880:intron 25.0%
! TCTAAAAAATGGTCCATTAT+AGG + chr4_1:51177487-51177506 Msa0553880:intron 25.0%
!!! AATAAAAAGGTTTTGAATCG+TGG - chr4_1:51177887-51177906 None:intergenic 25.0%
! AATAAAAACAGAGAATTGAC+AGG - chr4_1:51177938-51177957 None:intergenic 25.0%
! TGACATAAACATTTGTGTAA+AGG + chr4_1:51178197-51178216 Msa0553880:intron 25.0%
! TAAACATTTGTGTAAAGGTT+TGG + chr4_1:51178202-51178221 Msa0553880:intron 25.0%
!!! GACAGAGATTTATTTTATTC+AGG + chr4_1:51178482-51178501 Msa0553880:intron 25.0%
! ATCAACAATAAATTAGAGAG+GGG - chr4_1:51178544-51178563 None:intergenic 25.0%
!!! AGACTTTATATTTTAGAACG+TGG - chr4_1:51178726-51178745 None:intergenic 25.0%
! GAAACAAAAATGTCAAAAAG+GGG + chr4_1:51178853-51178872 Msa0553880:intron 25.0%
!!! TAAGGGTATTATTTATATGG+TGG + chr4_1:51178938-51178957 Msa0553880:intron 25.0%
!!! TGTTGGTTTTGTTTGTTTAT+TGG + chr4_1:51179460-51179479 Msa0553880:intron 25.0%
!!! GTTGGTTTTGTTTGTTTATT+GGG + chr4_1:51179461-51179480 Msa0553880:intron 25.0%
! AAAAAATTACAAGGGGAAAT+CGG - chr4_1:51179530-51179549 None:intergenic 25.0%
! GTGGAAAAAAAAATTACAAG+GGG - chr4_1:51179537-51179556 None:intergenic 25.0%
! GGTGGAAAAAAAAATTACAA+GGG - chr4_1:51179538-51179557 None:intergenic 25.0%
! GATAAATCACAACATGAAAT+GGG - chr4_1:51179726-51179745 None:intergenic 25.0%
! TGATAAATCACAACATGAAA+TGG - chr4_1:51179727-51179746 None:intergenic 25.0%
! ATATTGAAGAACTAAAGGTT+TGG + chr4_1:51180137-51180156 Msa0553880:intron 25.0%
! AGTATGAAATCAATTAGAGT+GGG - chr4_1:51180336-51180355 None:intergenic 25.0%
! TATTATTGCTACAAGTTTGT+AGG + chr4_1:51180464-51180483 Msa0553880:intron 25.0%
! ATTGTTCATTTCGTTGAATA+AGG - chr4_1:51180499-51180518 None:intergenic 25.0%
! TATTATTGCTACAAGTTTGT+AGG + chr4_1:51180464-51180483 Msa0553880:intron 25.0%
! ATTGTTCATTTCGTTGAATA+AGG - chr4_1:51180499-51180518 None:intergenic 25.0%
! AATGAACAATTATATAGCTC+AGG + chr4_1:51180631-51180650 Msa0553880:CDS 25.0%
!! TGTATCTTTACCTTTTATTC+TGG + chr4_1:51180672-51180691 Msa0553880:CDS 25.0%
! AATTGAACAACAATTTCTAC+TGG - chr4_1:51180745-51180764 None:intergenic 25.0%
! ATTACATGAACTTAAGTAGT+TGG + chr4_1:51180815-51180834 Msa0553880:intron 25.0%
! TAGTATATAGCAGTAACTTT+CGG - chr4_1:51180968-51180987 None:intergenic 25.0%
! ATAACATAGACCCATAAAAT+AGG - chr4_1:51181038-51181057 None:intergenic 25.0%
!! TATTTTATGGGTCTATGTTA+TGG + chr4_1:51181037-51181056 Msa0553880:intron 25.0%
!! ATTTTATGGGTCTATGTTAT+GGG + chr4_1:51181038-51181057 Msa0553880:intron 25.0%
! CTTTATGATACCACAAAATT+AGG - chr4_1:51181363-51181382 None:intergenic 25.0%
!!! ATTTTCAAGTAGATAAGTCT+TGG + chr4_1:51181441-51181460 Msa0553880:intron 25.0%
!!! TTTTCAAGTAGATAAGTCTT+GGG + chr4_1:51181442-51181461 Msa0553880:intron 25.0%
! AGAGAGTAAACATAAATAAG+TGG - chr4_1:51181520-51181539 None:intergenic 25.0%
!! TGTTTGTTTCTTTATCGTTT+GGG + chr4_1:51181916-51181935 Msa0553880:three_prime_UTR 25.0%
! TGTAGTAAATGATAAATGGT+AGG - chr4_1:51181962-51181981 None:intergenic 25.0%
! GAGAATCAGTTGTAATAAAT+CGG + chr4_1:51182045-51182064 Msa0553880:three_prime_UTR 25.0%
!! TATACAACATAGGTTACTTT+CGG + chr4_1:51182073-51182092 Msa0553880:three_prime_UTR 25.0%
!!! GCTAAGTTTTCTAGTTTATA+TGG + chr4_1:51182121-51182140 Msa0553880:three_prime_UTR 25.0%
!! ACTATATATTGGTTGGTATT+TGG + chr4_1:51182150-51182169 Msa0553880:three_prime_UTR 25.0%
! AGTAATTTAACAAGTCTAGT+GGG + chr4_1:51182268-51182287 Msa0553880:intron 25.0%
! TAGCTATAATCAAATCATTC+AGG + chr4_1:51182535-51182554 Msa0553880:intron 25.0%
! AGCTATAATCAAATCATTCA+GGG + chr4_1:51182536-51182555 Msa0553880:intron 25.0%
!!! TTGGTGATGAAAAAGTAAAT+AGG - chr4_1:51182965-51182984 None:intergenic 25.0%
! TCATCACCAATTTATATCAA+AGG + chr4_1:51182975-51182994 Msa0553880:intron 25.0%
! AAAAACCTTTCATGCTAAAT+TGG - chr4_1:51183885-51183904 None:intergenic 25.0%
!!! CATGAGAAATTTTGAAATTC+AGG + chr4_1:51184013-51184032 Msa0553880:intron 25.0%
!!! TATTGCTCATTTTTACAAGT+GGG + chr4_1:51184460-51184479 Msa0553880:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG - chr4_1:51184487-51184506 None:intergenic 25.0%
! TTATTACTTCTTTATGCAAG+TGG + chr4_1:51184500-51184519 Msa0553880:intron 25.0%
! TATTACTTCTTTATGCAAGT+GGG + chr4_1:51184501-51184520 Msa0553880:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG - chr4_1:51184487-51184506 None:intergenic 25.0%
! GATACATATGAAATACTTCA+AGG - chr4_1:51184736-51184755 None:intergenic 25.0%
!! TGAAGTATTTCATATGTATC+CGG + chr4_1:51184736-51184755 Msa0553880:intron 25.0%
! TATCCAATATGTATCTGATA+TGG + chr4_1:51184838-51184857 Msa0553880:intron 25.0%
! AATCTCTATTTACAAAGCAT+GGG - chr4_1:51184969-51184988 None:intergenic 25.0%
! TAATCTCTATTTACAAAGCA+TGG - chr4_1:51184970-51184989 None:intergenic 25.0%
!!! ATTAGCTTCTAATTGATTTG+TGG + chr4_1:51185025-51185044 Msa0553880:intron 25.0%
!! AATTATCATGATAGCTTTTG+GGG + chr4_1:51185194-51185213 Msa0553880:intron 25.0%
!! ACAATATGGATTACGATAAA+AGG - chr4_1:51185276-51185295 None:intergenic 25.0%
!!! TGATTGTTTTATATTGTAGG+TGG + chr4_1:51185363-51185382 Msa0553880:intron 25.0%
!!! TATTGTAGACTTACTTTTTG+TGG + chr4_1:51185501-51185520 Msa0553880:intron 25.0%
!!! ATTGTAGACTTACTTTTTGT+GGG + chr4_1:51185502-51185521 Msa0553880:intron 25.0%
! AGGATAAAAAGGAAATACAA+TGG + chr4_1:51185621-51185640 Msa0553880:intron 25.0%
! TAAAAAGGAAATACAATGGA+AGG + chr4_1:51185625-51185644 Msa0553880:intron 25.0%
! AAAAAGGAAATACAATGGAA+GGG + chr4_1:51185626-51185645 Msa0553880:intron 25.0%
! CTAATCCTAAAATTCAATGA+AGG + chr4_1:51185763-51185782 Msa0553880:intron 25.0%
! AATGAACAATTATATAGCTC+TGG + chr4_1:51180631-51180650 Msa0553880:CDS 25.0%
!! TGTATCTTTACCTTTTATTC+TGG + chr4_1:51180672-51180691 Msa0553880:CDS 25.0%
! GAAACAAAACAAAACAATAG+AGG - chr4_1:51186145-51186164 None:intergenic 25.0%
! CTGGATAAAATAATCAAAAG+AGG - chr4_1:51186291-51186310 None:intergenic 25.0%
! GTGTCATAAAATCAGTAATT+TGG + chr4_1:51186895-51186914 Msa0553880:intron 25.0%
!! GAAATAATTTTCATGTAGAG+AGG + chr4_1:51186955-51186974 Msa0553880:intron 25.0%
!! ATCACAAAGGTATATTGATT+GGG - chr4_1:51187375-51187394 None:intergenic 25.0%
!! AATCACAAAGGTATATTGAT+TGG - chr4_1:51187376-51187395 None:intergenic 25.0%
! AAAAGTTACCACAAAAAATG+TGG - chr4_1:51187526-51187545 None:intergenic 25.0%
! TGAAATTAATCCTATGTTGT+TGG - chr4_1:51187591-51187610 None:intergenic 25.0%
! TACAAATTACACTGTAAATC+GGG - chr4_1:51187620-51187639 None:intergenic 25.0%
!!! GTAAAGTTTTTCAACTTATG+TGG + chr4_1:51187637-51187656 Msa0553880:three_prime_UTR 25.0%
!!! CTTGTTTTGTATCATTTGAT+AGG + chr4_1:51187690-51187709 Msa0553880:three_prime_UTR 25.0%
CTAAATTGATCGAAAACGAA+GGG - chr4_1:51176949-51176968 None:intergenic 30.0%
TCTAAATTGATCGAAAACGA+AGG - chr4_1:51176950-51176969 None:intergenic 30.0%
AGCTAAACCAAACATGAAAT+CGG - chr4_1:51177304-51177323 None:intergenic 30.0%
! ATTTCATGTTTGGTTTAGCT+TGG + chr4_1:51177304-51177323 Msa0553880:intron 30.0%
! TTTCATGTTTGGTTTAGCTT+GGG + chr4_1:51177305-51177324 Msa0553880:intron 30.0%
!!! CATGCGTTCAATTTTGATTT+AGG + chr4_1:51177365-51177384 Msa0553880:intron 30.0%
CCTTGAATAAAATGTACCAT+TGG - chr4_1:51177467-51177486 None:intergenic 30.0%
! CCAATGGTACATTTTATTCA+AGG + chr4_1:51177464-51177483 Msa0553880:intron 30.0%
ATTATAGGTAGTGTCTGATA+CGG + chr4_1:51177502-51177521 Msa0553880:intron 30.0%
AACATAGTGAACAAACGTTA+TGG + chr4_1:51177529-51177548 Msa0553880:intron 30.0%
TTGTTCTATACCAATTACCA+TGG - chr4_1:51177561-51177580 None:intergenic 30.0%
! GCAATGAATTTTTCATAGAC+TGG - chr4_1:51177736-51177755 None:intergenic 30.0%
AACCTTTCATACTAAATTGC+CGG - chr4_1:51178069-51178088 None:intergenic 30.0%
! CAAATGAGTTGTTTCAAACA+AGG - chr4_1:51178171-51178190 None:intergenic 30.0%
GTAGCGAAAATTGTCAAAAA+TGG - chr4_1:51178508-51178527 None:intergenic 30.0%
!!! TGACAATTTTCGCTACTTTT+TGG + chr4_1:51178512-51178531 Msa0553880:intron 30.0%
! CTTTTAACGTGGTAAAAAAC+TGG - chr4_1:51178639-51178658 None:intergenic 30.0%
GGGTGGAAAAAAAAATTACA+AGG - chr4_1:51179539-51179558 None:intergenic 30.0%
! GTTTTGTCAATGATTAAGCA+CGG + chr4_1:51179627-51179646 Msa0553880:intron 30.0%
! TAATTATTAGCCTCAGAAAC+TGG + chr4_1:51179678-51179697 Msa0553880:intron 30.0%
GAGTGATATTGAAGAACTAA+AGG + chr4_1:51180132-51180151 Msa0553880:CDS 30.0%
CAGTATGAAATCAATTAGAG+TGG - chr4_1:51180337-51180356 None:intergenic 30.0%
! CACTCTAATTGATTTCATAC+TGG + chr4_1:51180335-51180354 Msa0553880:intron 30.0%
!!! TTTACCTTTTATTCTGGTTC+AGG + chr4_1:51180678-51180697 Msa0553880:CDS 30.0%
TATACCTGAACCAGAATAAA+AGG - chr4_1:51180685-51180704 None:intergenic 30.0%
! ATTGTTGTTCAATTATGCCT+TGG + chr4_1:51180751-51180770 Msa0553880:intron 30.0%
GAAAATAGATCTTATCCAAC+TGG + chr4_1:51180883-51180902 Msa0553880:intron 30.0%
TAGTTAATTCACTAACCAGT+TGG - chr4_1:51180901-51180920 None:intergenic 30.0%
AGTTACTGCTATATACTAGA+TGG + chr4_1:51180970-51180989 Msa0553880:intron 30.0%
! TACTCTGTTTGCCTATTTTA+TGG + chr4_1:51181024-51181043 Msa0553880:intron 30.0%
! ACTCTGTTTGCCTATTTTAT+GGG + chr4_1:51181025-51181044 Msa0553880:intron 30.0%
GTCTATGTTATGGGTTTATA+CGG + chr4_1:51181047-51181066 Msa0553880:intron 30.0%
AATCAAATATCAGCACCAAT+AGG - chr4_1:51181158-51181177 None:intergenic 30.0%
AGGAAGTCTAAACATTAAGA+CGG - chr4_1:51181343-51181362 None:intergenic 30.0%
! GTTTAGACTTCCTAATTTTG+TGG + chr4_1:51181350-51181369 Msa0553880:intron 30.0%
! TTTTGTGGTATCATAAAGTC+TGG + chr4_1:51181365-51181384 Msa0553880:intron 30.0%
! CAGATAAATTTTCCAACACA+GGG - chr4_1:51181497-51181516 None:intergenic 30.0%
CAATGTTACACACAATATTG+CGG + chr4_1:51181624-51181643 Msa0553880:CDS 30.0%
TATACAGACATGCTTAAGTA+AGG - chr4_1:51181812-51181831 None:intergenic 30.0%
CTGATGACTAACTATTATGA+AGG - chr4_1:51181864-51181883 None:intergenic 30.0%
! CTGTTTGTTTCTTTATCGTT+TGG + chr4_1:51181915-51181934 Msa0553880:three_prime_UTR 30.0%
! GTTTGTTTCTTTATCGTTTG+GGG + chr4_1:51181917-51181936 Msa0553880:three_prime_UTR 30.0%
AGAGTTACGGTAAAAATATG+CGG - chr4_1:51182003-51182022 None:intergenic 30.0%
GAAAGTAACCTATGTTGTAT+AGG - chr4_1:51182074-51182093 None:intergenic 30.0%
! ATACAACATAGGTTACTTTC+GGG + chr4_1:51182074-51182093 Msa0553880:three_prime_UTR 30.0%
CAGTAATTTAACAAGTCTAG+TGG + chr4_1:51182267-51182286 Msa0553880:intron 30.0%
ATTGTACTAAGTGATGTTTC+GGG - chr4_1:51182571-51182590 None:intergenic 30.0%
CATTGTACTAAGTGATGTTT+CGG - chr4_1:51182572-51182591 None:intergenic 30.0%
TCCATTACCTCAAATCTAAA+TGG + chr4_1:51182720-51182739 Msa0553880:intron 30.0%
! ACCATTTAGATTTGAGGTAA+TGG - chr4_1:51182724-51182743 None:intergenic 30.0%
!!! GGTGTTGCTTTTATAGATAA+CGG + chr4_1:51182741-51182760 Msa0553880:intron 30.0%
AAAAAATTACGTAGACCTTG+AGG - chr4_1:51182786-51182805 None:intergenic 30.0%
CGTAGAATATTCAATGTTTG+AGG + chr4_1:51182807-51182826 Msa0553880:intron 30.0%
! ATGTGAAATATGGTGTGTTT+TGG - chr4_1:51182875-51182894 None:intergenic 30.0%
GTATTATGCGATGTGAAATA+TGG - chr4_1:51182885-51182904 None:intergenic 30.0%
AGTCGACCTTTGATATAAAT+TGG - chr4_1:51182984-51183003 None:intergenic 30.0%
ATTTATATCAAAGGTCGACT+CGG + chr4_1:51182984-51183003 Msa0553880:intron 30.0%
TACTAGGGATTGGAAAATTT+AGG + chr4_1:51183187-51183206 Msa0553880:intron 30.0%
AAAAAGTAGATCTGATTGAG+GGG - chr4_1:51183262-51183281 None:intergenic 30.0%
GAAAAAGTAGATCTGATTGA+GGG - chr4_1:51183263-51183282 None:intergenic 30.0%
GAAGAATCATCATTCATCAA+TGG - chr4_1:51184131-51184150 None:intergenic 30.0%
CATTTAAGTAGTCCTTGTTA+AGG - chr4_1:51184286-51184305 None:intergenic 30.0%
CTTAACAAGGACTACTTAAA+TGG + chr4_1:51184284-51184303 Msa0553880:intron 30.0%
CCTTATTAGTGTATTGTCAT+TGG - chr4_1:51184376-51184395 None:intergenic 30.0%
CCAATGACAATACACTAATA+AGG + chr4_1:51184373-51184392 Msa0553880:intron 30.0%
!! CTATTGCTCATTTTTACAAG+TGG + chr4_1:51184459-51184478 Msa0553880:intron 30.0%
CATCCATATCAGATACATAT+TGG - chr4_1:51184844-51184863 None:intergenic 30.0%
GATTGTGAAATTTGTAGAAG+TGG + chr4_1:51184933-51184952 Msa0553880:intron 30.0%
AATTGATATCTTGCTTCGTA+TGG + chr4_1:51185138-51185157 Msa0553880:intron 30.0%
AGATAGTCAGATAGACAATA+TGG - chr4_1:51185290-51185309 None:intergenic 30.0%
AAGAAATAAACTGGGAAAAC+AGG - chr4_1:51185333-51185352 None:intergenic 30.0%
!!! TTGTAGACTTACTTTTTGTG+GGG + chr4_1:51185503-51185522 Msa0553880:intron 30.0%
!! GGCAATGGATATTATTTCTA+AGG + chr4_1:51185601-51185620 Msa0553880:intron 30.0%
GAATGATATTGAAGAGCTAA+AGG + chr4_1:51185667-51185686 Msa0553880:intron 30.0%
AAGTTATAACTCAAGACTGT+GGG - chr4_1:51185697-51185716 None:intergenic 30.0%
AAAGTTATAACTCAAGACTG+TGG - chr4_1:51185698-51185717 None:intergenic 30.0%
! AGGTAAAAGCATAAGATACA+TGG - chr4_1:51185727-51185746 None:intergenic 30.0%
! ATGGACCTTCATTGAATTTT+AGG - chr4_1:51185771-51185790 None:intergenic 30.0%
! TTTACCTTTTATTCTGGTAC+AGG + chr4_1:51186100-51186119 Msa0553880:intron 30.0%
TTTACCTGTACCAGAATAAA+AGG - chr4_1:51186107-51186126 None:intergenic 30.0%
! AAATGTTGCCAATTTTTCCT+TGG + chr4_1:51186315-51186334 Msa0553880:intron 30.0%
TTGAAGATCCAAGGAAAAAT+TGG - chr4_1:51186326-51186345 None:intergenic 30.0%
ATCATACAATTGAAGATCCA+AGG - chr4_1:51186335-51186354 None:intergenic 30.0%
AATACAAATGCTTGCAAAAG+CGG - chr4_1:51186426-51186445 None:intergenic 30.0%
TCAAGTTATAAACTTTCCTG+TGG - chr4_1:51186601-51186620 None:intergenic 30.0%
GAGTAAACATAAATAGGAAG+TGG - chr4_1:51187037-51187056 None:intergenic 30.0%
TGTACAGACATGCTTAATTA+GGG - chr4_1:51187335-51187354 None:intergenic 30.0%
ATGTACAGACATGCTTAATT+AGG - chr4_1:51187336-51187355 None:intergenic 30.0%
! AAATGACTTGTCTGTATTGA+TGG - chr4_1:51187404-51187423 None:intergenic 30.0%
ATCAATACAGACAAGTCATT+TGG + chr4_1:51187403-51187422 Msa0553880:three_prime_UTR 30.0%
CTAAACAATAAAGAGGCAAA+CGG - chr4_1:51187449-51187468 None:intergenic 30.0%
GTCTAACCTAAACAATAAAG+AGG - chr4_1:51187456-51187475 None:intergenic 30.0%
!! TTTTTCCTCCACATTTTTTG+TGG + chr4_1:51187515-51187534 Msa0553880:three_prime_UTR 30.0%
ACAAATTACACTGTAAATCG+GGG - chr4_1:51187619-51187638 None:intergenic 30.0%
ACTTATGTGGATATTAGTTG+TGG + chr4_1:51187650-51187669 Msa0553880:three_prime_UTR 30.0%
TGATACAAAACAAGATGCAT+TGG - chr4_1:51187684-51187703 None:intergenic 30.0%
! AATCTAGAAAGTGCAGAGAT+TGG - chr4_1:51177235-51177254 None:intergenic 35.0%
ATTGGAAGTAATGTATAGCC+AGG - chr4_1:51177449-51177468 None:intergenic 35.0%
TGGCTATACATTACTTCCAA+TGG + chr4_1:51177448-51177467 Msa0553880:intron 35.0%
GTATCAGACACTACCTATAA+TGG - chr4_1:51177503-51177522 None:intergenic 35.0%
AGAGTTTATGCATAAGCTCT+TGG + chr4_1:51178333-51178352 Msa0553880:intron 35.0%
TGTGAGAAGGTAGAAAGTAA+AGG + chr4_1:51178575-51178594 Msa0553880:intron 35.0%
AGGAAGAACAACTTACAATG+AGG + chr4_1:51178595-51178614 Msa0553880:intron 35.0%
GAACAACTTACAATGAGGTT+AGG + chr4_1:51178600-51178619 Msa0553880:intron 35.0%
! AAAAGCACAGTTCTCAATCA+TGG + chr4_1:51178654-51178673 Msa0553880:intron 35.0%
CGCTATAGCATTTATTGAGT+TGG - chr4_1:51178697-51178716 None:intergenic 35.0%
CAAAAATGTCAAAAAGGGGT+TGG + chr4_1:51178857-51178876 Msa0553880:intron 35.0%
AAACGTTGCTAACCAAATCA+AGG - chr4_1:51178883-51178902 None:intergenic 35.0%
!!! TGATTTGGTTAGCAACGTTT+TGG + chr4_1:51178883-51178902 Msa0553880:intron 35.0%
!! TTATATGGTGGACGATATTG+TGG + chr4_1:51178950-51178969 Msa0553880:intron 35.0%
!!! AGGTTTCACTGCAGTTTTTT+TGG + chr4_1:51179366-51179385 Msa0553880:intron 35.0%
!!! GGTTTCACTGCAGTTTTTTT+GGG + chr4_1:51179367-51179386 Msa0553880:intron 35.0%
TATAGCTCCGCATCATTATT+TGG + chr4_1:51179435-51179454 Msa0553880:intron 35.0%
CAACACACCAAATAATGATG+CGG - chr4_1:51179445-51179464 None:intergenic 35.0%
!!! GGTTTTGTTTGTTTATTGGG+TGG + chr4_1:51179464-51179483 Msa0553880:intron 35.0%
! TGTTTATTGGGTGGTTTTTG+AGG + chr4_1:51179473-51179492 Msa0553880:intron 35.0%
! GTTTATTGGGTGGTTTTTGA+GGG + chr4_1:51179474-51179493 Msa0553880:intron 35.0%
!! TTTATTGGGTGGTTTTTGAG+GGG + chr4_1:51179475-51179494 Msa0553880:intron 35.0%
!!! ATTAAGCACGGTGGTTTTTT+GGG + chr4_1:51179639-51179658 Msa0553880:intron 35.0%
! TCTGAGGCTAATAATTACCA+CGG - chr4_1:51179675-51179694 None:intergenic 35.0%
AATCACAACATGAAATGGGT+AGG - chr4_1:51179722-51179741 None:intergenic 35.0%
! GAATTTTCTGATCCAAGCAA+TGG + chr4_1:51179859-51179878 Msa0553880:CDS 35.0%
GAAGATAAGAAAACCTGATC+AGG - chr4_1:51179895-51179914 None:intergenic 35.0%
! TGATGCTCTGAATGTTCTTA+TGG + chr4_1:51180045-51180064 Msa0553880:CDS 35.0%
TCTGAATGTTCTTATGGCTA+TGG + chr4_1:51180051-51180070 Msa0553880:CDS 35.0%
GGCTATGGATATTATTTCCA+AGG + chr4_1:51180066-51180085 Msa0553880:CDS 35.0%
TTCTTCAATATCACTCAGAC+TGG - chr4_1:51180128-51180147 None:intergenic 35.0%
TTAGATCAGAACATCACTGA+AGG - chr4_1:51180207-51180226 None:intergenic 35.0%
ATTAAATAGACACAGCGTCT+TGG + chr4_1:51180245-51180264 Msa0553880:intron 35.0%
TTAAATAGACACAGCGTCTT+GGG + chr4_1:51180246-51180265 Msa0553880:intron 35.0%
!!! ATCTCAGTATCTGCCTTTTT+TGG + chr4_1:51180710-51180729 Msa0553880:intron 35.0%
CTGGACAAAATGACCAAAAA+AGG - chr4_1:51180726-51180745 None:intergenic 35.0%
ATGAACTTAAGTAGTTGGCT+TGG + chr4_1:51180820-51180839 Msa0553880:intron 35.0%
GAATAATATGCTCATCCTGT+TGG + chr4_1:51181116-51181135 Msa0553880:intron 35.0%
AACTCAGATAATGACAAGCA+AGG - chr4_1:51181292-51181311 None:intergenic 35.0%
!! GTTATGATGTGACTAGCTTT+AGG + chr4_1:51181309-51181328 Msa0553880:intron 35.0%
GTATCATAAAGTCTGGAAAG+TGG + chr4_1:51181372-51181391 Msa0553880:intron 35.0%
GAAACTAGTGTATCCTATTG+TGG + chr4_1:51181394-51181413 Msa0553880:intron 35.0%
! GCAGATAAATTTTCCAACAC+AGG - chr4_1:51181498-51181517 None:intergenic 35.0%
TGACGACAATTATGTTCTCA+AGG + chr4_1:51181564-51181583 Msa0553880:CDS 35.0%
CAATTATGTTCTCAAGGCAA+TGG + chr4_1:51181570-51181589 Msa0553880:CDS 35.0%
CTCTTGCCTTTAATATTCCA+GGG - chr4_1:51181747-51181766 None:intergenic 35.0%
ACTCTTGCCTTTAATATTCC+AGG - chr4_1:51181748-51181767 None:intergenic 35.0%
TGATTCTCTCTTACTACATG+GGG - chr4_1:51182033-51182052 None:intergenic 35.0%
CTGATTCTCTCTTACTACAT+GGG - chr4_1:51182034-51182053 None:intergenic 35.0%
! ACTGATTCTCTCTTACTACA+TGG - chr4_1:51182035-51182054 None:intergenic 35.0%
ATCGGTAACCTATACAACAT+AGG + chr4_1:51182063-51182082 Msa0553880:three_prime_UTR 35.0%
TTCGGGATTCACTAATTTAC+AGG + chr4_1:51182091-51182110 Msa0553880:three_prime_UTR 35.0%
TCGGGATTCACTAATTTACA+GGG + chr4_1:51182092-51182111 Msa0553880:three_prime_UTR 35.0%
CTAATATGGACAGTACGAAA+CGG - chr4_1:51182232-51182251 None:intergenic 35.0%
AAGTCTAGTGGGAAATTGAT+TGG + chr4_1:51182279-51182298 Msa0553880:intron 35.0%
AATACTTGAGCAAATGCAGA+CGG - chr4_1:51182323-51182342 None:intergenic 35.0%
TCGGCTAACTCGATAAAAAT+TGG + chr4_1:51182420-51182439 Msa0553880:intron 35.0%
AGCAACACCATTTAGATTTG+AGG - chr4_1:51182730-51182749 None:intergenic 35.0%
AGTTCAACTTGTGACTGTTA+CGG + chr4_1:51183039-51183058 Msa0553880:intron 35.0%
ATACACATTAAACCTTGCGT+AGG + chr4_1:51183162-51183181 Msa0553880:intron 35.0%
TACACATTAAACCTTGCGTA+GGG + chr4_1:51183163-51183182 Msa0553880:intron 35.0%
AAAAGTAGATCTGATTGAGG+GGG - chr4_1:51183261-51183280 None:intergenic 35.0%
GGAAAAAGTAGATCTGATTG+AGG - chr4_1:51183264-51183283 None:intergenic 35.0%
ATGAAATTGCAGAAGGGAAA+GGG - chr4_1:51183326-51183345 None:intergenic 35.0%
AATGAAATTGCAGAAGGGAA+AGG - chr4_1:51183327-51183346 None:intergenic 35.0%
GCGAAAATGAAATTGCAGAA+GGG - chr4_1:51183332-51183351 None:intergenic 35.0%
TGCGAAAATGAAATTGCAGA+AGG - chr4_1:51183333-51183352 None:intergenic 35.0%
!! GAGGAAGAATTTGAGTTGTA+CGG - chr4_1:51183374-51183393 None:intergenic 35.0%
GCAAAACCTTAATTGAGAGA+GGG - chr4_1:51183446-51183465 None:intergenic 35.0%
AGCAAAACCTTAATTGAGAG+AGG - chr4_1:51183447-51183466 None:intergenic 35.0%
CATGTCATGCAAATTGCTTA+TGG + chr4_1:51183712-51183731 Msa0553880:intron 35.0%
CTTGTGATGCAAATTGCTTA+TGG + chr4_1:51183774-51183793 Msa0553880:intron 35.0%
AGTAGCAAGAAGAAAAAGAG+AGG + chr4_1:51183814-51183833 Msa0553880:intron 35.0%
TTGTTAAGGAACTACCATTG+GGG - chr4_1:51184272-51184291 None:intergenic 35.0%
CTTGTTAAGGAACTACCATT+GGG - chr4_1:51184273-51184292 None:intergenic 35.0%
AATAAGTGATGTGTCACGTA+GGG - chr4_1:51184311-51184330 None:intergenic 35.0%
AAATAAGTGATGTGTCACGT+AGG - chr4_1:51184312-51184331 None:intergenic 35.0%
! CTCAATTTTTCTTCCTCCAA+TGG + chr4_1:51184623-51184642 Msa0553880:intron 35.0%
! AATTTTTCTTCCTCCAATGG+AGG + chr4_1:51184626-51184645 Msa0553880:intron 35.0%
! ATTTTTCTTCCTCCAATGGA+GGG + chr4_1:51184627-51184646 Msa0553880:intron 35.0%
! ATACTTAGAGCATCTCCAAT+GGG - chr4_1:51184690-51184709 None:intergenic 35.0%
! AATACTTAGAGCATCTCCAA+TGG - chr4_1:51184691-51184710 None:intergenic 35.0%
AAATACTTCAAGGATACTCG+TGG - chr4_1:51184726-51184745 None:intergenic 35.0%
TAATACTTCACGAATACTCG+TGG - chr4_1:51184817-51184836 None:intergenic 35.0%
TGATATGGATGTCTCCAATT+TGG + chr4_1:51184853-51184872 Msa0553880:intron 35.0%
TGTGAGAAGGTAGAAAGTAA+AGG + chr4_1:51178575-51178594 Msa0553880:intron 35.0%
AGGAAGAACAACTTACAATG+AGG + chr4_1:51178595-51178614 Msa0553880:intron 35.0%
ATTATTGGGTCAAGAACTTG+TGG + chr4_1:51185238-51185257 Msa0553880:intron 35.0%
AAGGAGAGAAAACCTTATCA+GGG - chr4_1:51185438-51185457 None:intergenic 35.0%
AAAGGAGAGAAAACCTTATC+AGG - chr4_1:51185439-51185458 None:intergenic 35.0%
TGAATGGCAGACACAATTAA+AGG - chr4_1:51185457-51185476 None:intergenic 35.0%
ATGAGAAAAACATTCGTCGA+AGG + chr4_1:51185552-51185571 Msa0553880:intron 35.0%
TGAGAAAAACATTCGTCGAA+GGG + chr4_1:51185553-51185572 Msa0553880:intron 35.0%
ATATCATTCAGACTAGTACG+AGG - chr4_1:51185656-51185675 None:intergenic 35.0%
TTAGCTCAGAATATCATTGC+AGG - chr4_1:51185747-51185766 None:intergenic 35.0%
AAAGGAAATCATCCTATCTG+CGG + chr4_1:51185848-51185867 Msa0553880:intron 35.0%
TGCAATTTCAAATGCAGCAA+AGG - chr4_1:51185933-51185952 None:intergenic 35.0%
! GTTTCTGTTTGCTAACTACT+TGG + chr4_1:51185986-51186005 Msa0553880:intron 35.0%
GATTGTTGCATCAAGTTTGT+AGG + chr4_1:51186008-51186027 Msa0553880:intron 35.0%
AATAGAGGAAGTTGAGATGA+TGG - chr4_1:51186130-51186149 None:intergenic 35.0%
!!! TGTTTTGTTTCGTTTCCCAT+AGG + chr4_1:51186154-51186173 Msa0553880:intron 35.0%
GTGTCAAACATAATTACCTC+CGG - chr4_1:51186189-51186208 None:intergenic 35.0%
ATTATGTTTGACACTGAACG+TGG + chr4_1:51186195-51186214 Msa0553880:intron 35.0%
TTATGTTTGACACTGAACGT+GGG + chr4_1:51186196-51186215 Msa0553880:intron 35.0%
! AAATTGGCAACATTTGCTAC+TGG - chr4_1:51186310-51186329 None:intergenic 35.0%
ATACAAATGCTTGCAAAAGC+GGG - chr4_1:51186425-51186444 None:intergenic 35.0%
ATATAAAGCCAAAAGGCAAC+CGG - chr4_1:51186538-51186557 None:intergenic 35.0%
TGAGCAGATATAAAGCCAAA+AGG - chr4_1:51186545-51186564 None:intergenic 35.0%
ATATCTGCTCAATGCTATGT+CGG + chr4_1:51186554-51186573 Msa0553880:intron 35.0%
TAACTTAGAAAGAACGCCAA+AGG - chr4_1:51186814-51186833 None:intergenic 35.0%
TTGGCGTTCTTTCTAAGTTA+TGG + chr4_1:51186814-51186833 Msa0553880:intron 35.0%
AAGTTATGGCGTGATTATCT+AGG + chr4_1:51186828-51186847 Msa0553880:intron 35.0%
TTATTTCCGTTGCCTCTATT+CGG - chr4_1:51186942-51186961 None:intergenic 35.0%
! ATTTTCATGTAGAGAGGTTC+TGG + chr4_1:51186961-51186980 Msa0553880:intron 35.0%
! TTTTCATGTAGAGAGGTTCT+GGG + chr4_1:51186962-51186981 Msa0553880:intron 35.0%
TGACGACAATTATGTGCTTA+AGG + chr4_1:51187093-51187112 Msa0553880:intron 35.0%
CAATTATGTGCTTAAGGCAA+TGG + chr4_1:51187099-51187118 Msa0553880:intron 35.0%
GTTACACACAATGTTACAGA+TGG + chr4_1:51187151-51187170 Msa0553880:intron 35.0%
CTCTTGCCTTTAATATTCCA+GGG - chr4_1:51181747-51181766 None:intergenic 35.0%
ACTCTTGCCTTTAATATTCC+AGG - chr4_1:51181748-51181767 None:intergenic 35.0%
! TTGATGGCTAACAATCACAA+AGG - chr4_1:51187388-51187407 None:intergenic 35.0%
ATACAGACAAGTCATTTGGT+AGG + chr4_1:51187407-51187426 Msa0553880:three_prime_UTR 35.0%
CGTTTGCCTCTTTATTGTTT+AGG + chr4_1:51187447-51187466 Msa0553880:three_prime_UTR 35.0%
AGTTACCACAAAAAATGTGG+AGG - chr4_1:51187523-51187542 None:intergenic 35.0%
GATTAAGGAGTTATGCAGGT+AGG + chr4_1:51176705-51176724 Msa0553880:five_prime_UTR 40.0%
!! GTGAGGTTGTGATGGATTAA+CGG - chr4_1:51176825-51176844 None:intergenic 40.0%
AAATCGAAACTGCTCACTAC+AGG + chr4_1:51176974-51176993 Msa0553880:five_prime_UTR 40.0%
!! TTTAGCTTGGGATGAGATTC+TGG + chr4_1:51177317-51177336 Msa0553880:intron 40.0%
TGATATACTGGACTTGAACC+TGG + chr4_1:51177428-51177447 Msa0553880:intron 40.0%
TTTCGTGACTTTGGCTGTTA+CGG - chr4_1:51177852-51177871 None:intergenic 40.0%
GTACTGCGTAAACATTGAGT+GGG - chr4_1:51177995-51178014 None:intergenic 40.0%
GTACCAAGAAGAAAAAGCGA+CGG + chr4_1:51178011-51178030 Msa0553880:intron 40.0%
TACCAAGAAGAAAAAGCGAC+GGG + chr4_1:51178012-51178031 Msa0553880:CDS 40.0%
CTCCGGCAATTTAGTATGAA+AGG + chr4_1:51178064-51178083 Msa0553880:CDS 40.0%
AGGATAAGTGCAACTTTGCA+CGG - chr4_1:51178151-51178170 None:intergenic 40.0%
TGCTTCGATAAGCTATTGTG+AGG - chr4_1:51178265-51178284 None:intergenic 40.0%
TCAGCATTCAGCATACTAAG+GGG - chr4_1:51178411-51178430 None:intergenic 40.0%
CTCAGCATTCAGCATACTAA+GGG - chr4_1:51178412-51178431 None:intergenic 40.0%
ACTCAGCATTCAGCATACTA+AGG - chr4_1:51178413-51178432 None:intergenic 40.0%
AATTGTGAAACTTGCAGCAG+TGG + chr4_1:51178444-51178463 Msa0553880:intron 40.0%
! ATTTTCTGCAGTGTGTGAGA+AGG + chr4_1:51178562-51178581 Msa0553880:intron 40.0%
! TGAGAACTGTGCTTTTAACG+TGG - chr4_1:51178650-51178669 None:intergenic 40.0%
CTCAATCATGGATAGCAAAG+CGG + chr4_1:51178666-51178685 Msa0553880:intron 40.0%
!! TAGCAACGTTTTGGTCTCTA+TGG + chr4_1:51178892-51178911 Msa0553880:intron 40.0%
!! AACGTTTTGGTCTCTATGGA+AGG + chr4_1:51178896-51178915 Msa0553880:intron 40.0%
GTTGAGTAATTTGAACGTGC+TGG + chr4_1:51179004-51179023 Msa0553880:intron 40.0%
!!! GTTTGTTTTTCGAGTGGTGT+TGG + chr4_1:51179030-51179049 Msa0553880:intron 40.0%
!!! CTGACTGGTTTCTGTTTTCT+TGG + chr4_1:51179085-51179104 Msa0553880:intron 40.0%
! TTCGTTTCTTTTGTCCCTAC+TGG + chr4_1:51179259-51179278 Msa0553880:intron 40.0%
! CGTCTTTGTTGTCTTTAGGT+GGG + chr4_1:51179294-51179313 Msa0553880:intron 40.0%
! GTCTTTGTTGTCTTTAGGTG+GGG + chr4_1:51179295-51179314 Msa0553880:intron 40.0%
!!! TGCAGTTTTTTTGGGTTTCC+TGG + chr4_1:51179375-51179394 Msa0553880:intron 40.0%
!!! GCAGTTTTTTTGGGTTTCCT+GGG + chr4_1:51179376-51179395 Msa0553880:intron 40.0%
!! CGCATCATTATTTGGTGTGT+TGG + chr4_1:51179443-51179462 Msa0553880:intron 40.0%
CGAGATGCACTAATAAGCTA+GGG - chr4_1:51179559-51179578 None:intergenic 40.0%
TTGTCAATGATTAAGCACGG+TGG + chr4_1:51179630-51179649 Msa0553880:intron 40.0%
!!! GATTAAGCACGGTGGTTTTT+TGG + chr4_1:51179638-51179657 Msa0553880:intron 40.0%
! TTTTCTGATCCAAGCAATGG+TGG + chr4_1:51179862-51179881 Msa0553880:CDS 40.0%
ATGAGAAAAACATCCGTCGA+AGG + chr4_1:51180017-51180036 Msa0553880:CDS 40.0%
TGAGAAAAACATCCGTCGAA+GGG + chr4_1:51180018-51180037 Msa0553880:CDS 40.0%
GGCTTAGGAGTAGAATTGAA+AGG + chr4_1:51180267-51180286 Msa0553880:CDS 40.0%
TGAAATCAATTAGAGTGGGC+TGG - chr4_1:51180332-51180351 None:intergenic 40.0%
TTCATACTGGAATGCTAACC+TGG + chr4_1:51180348-51180367 Msa0553880:intron 40.0%
CCAAACGAATGCCCAAAAAA+GGG - chr4_1:51180935-51180954 None:intergenic 40.0%
TCCAAACGAATGCCCAAAAA+AGG - chr4_1:51180936-51180955 None:intergenic 40.0%
!! ACTTTCTAAGATCCATGACC+AGG - chr4_1:51181079-51181098 None:intergenic 40.0%
TCCTATTGTGGTCAAACACT+CGG + chr4_1:51181406-51181425 Msa0553880:intron 40.0%
ATAAGTCTTGGGAGCTAGTT+AGG + chr4_1:51181453-51181472 Msa0553880:intron 40.0%
TAAGTCTTGGGAGCTAGTTA+GGG + chr4_1:51181454-51181473 Msa0553880:intron 40.0%
!! GTTCTCAAGGCAATGGATTT+TGG + chr4_1:51181577-51181596 Msa0553880:CDS 40.0%
!! TCAAGGCAATGGATTTTGGT+GGG + chr4_1:51181581-51181600 Msa0553880:CDS 40.0%
TGTGTAACATTGTCACTCTG+TGG - chr4_1:51181616-51181635 None:intergenic 40.0%
GTTACACACAATATTGCGGA+TGG + chr4_1:51181628-51181647 Msa0553880:CDS 40.0%
TTTAATATTCCAGGGAGTGG+AGG - chr4_1:51181739-51181758 None:intergenic 40.0%
TCCACTCCCTGGAATATTAA+AGG + chr4_1:51181738-51181757 Msa0553880:CDS 40.0%
GTTAGTCATCAGTACAGCTT+TGG + chr4_1:51181872-51181891 Msa0553880:three_prime_UTR 40.0%
ATTCTCTCTTACTACATGGG+GGG - chr4_1:51182031-51182050 None:intergenic 40.0%
GATTCTCTCTTACTACATGG+GGG - chr4_1:51182032-51182051 None:intergenic 40.0%
ATACCAACAACACAAGCAAC+AGG - chr4_1:51182195-51182214 None:intergenic 40.0%
ATACTTGAGCAAATGCAGAC+GGG - chr4_1:51182322-51182341 None:intergenic 40.0%
ACTCAAGTTCGCAAACATCT+TGG + chr4_1:51182459-51182478 Msa0553880:intron 40.0%
!! AAGTGATGTTTCGGGTTTGT+GGG - chr4_1:51182563-51182582 None:intergenic 40.0%
!! TAAGTGATGTTTCGGGTTTG+TGG - chr4_1:51182564-51182583 None:intergenic 40.0%
TCTATATTACGTACGCCTCA+AGG + chr4_1:51182768-51182787 Msa0553880:intron 40.0%
!!! ATGGTGTGTTTTGGTTGTCA+TGG - chr4_1:51182866-51182885 None:intergenic 40.0%
! TTGTTTGTTGAGTAGCAGCA+CGG - chr4_1:51183230-51183249 None:intergenic 40.0%
!!! CAGATCTACTTTTTCCTCAC+CGG + chr4_1:51183268-51183287 Msa0553880:intron 40.0%
CGATTTCTGACGTGAAATGA+TGG - chr4_1:51183403-51183422 None:intergenic 40.0%
CGAAGAGGAAACTACGATTT+CGG + chr4_1:51183507-51183526 Msa0553880:intron 40.0%
GAAGAGGAAACTACGATTTC+GGG + chr4_1:51183508-51183527 Msa0553880:intron 40.0%
AACTTACGCAACTACTCCTT+GGG - chr4_1:51183671-51183690 None:intergenic 40.0%
AAACTTACGCAACTACTCCT+TGG - chr4_1:51183672-51183691 None:intergenic 40.0%
!! TCTTCCACTTTTATCACCTC+CGG - chr4_1:51183854-51183873 None:intergenic 40.0%
GAGGTGATAAAAGTGGAAGA+GGG + chr4_1:51183854-51183873 Msa0553880:intron 40.0%
CTTCGCCAATTTAGCATGAA+AGG + chr4_1:51183877-51183896 Msa0553880:intron 40.0%
!! TCCAGGTTTCATAGTTTGCT+AGG - chr4_1:51183956-51183975 None:intergenic 40.0%
!! TGGATACCTAGTACTGATGT+GGG + chr4_1:51183972-51183991 Msa0553880:intron 40.0%
GGGTACATGTGAGAAATTAG+TGG - chr4_1:51184252-51184271 None:intergenic 40.0%
ATTTCTCACATGTACCCCAA+TGG + chr4_1:51184255-51184274 Msa0553880:intron 40.0%
CCTTGTTAAGGAACTACCAT+TGG - chr4_1:51184274-51184293 None:intergenic 40.0%
CCAATGGTAGTTCCTTAACA+AGG + chr4_1:51184271-51184290 Msa0553880:intron 40.0%
TCTCTCTCCTAGGTAACTAA+CGG - chr4_1:51184568-51184587 None:intergenic 40.0%
TTAGTTACCTAGGAGAGAGA+GGG + chr4_1:51184568-51184587 Msa0553880:intron 40.0%
AAGGAACGGGCAACTATATA+AGG - chr4_1:51184595-51184614 None:intergenic 40.0%
TATAGTTGCCCGTTCCTTAA+CGG + chr4_1:51184597-51184616 Msa0553880:intron 40.0%
GAAAAATTGAGTCCCCGTTA+AGG - chr4_1:51184614-51184633 None:intergenic 40.0%
! TACTTAGAGCATCTCCAATG+GGG - chr4_1:51184689-51184708 None:intergenic 40.0%
GTCTCCAATTTGGATTATCC+AGG + chr4_1:51184863-51184882 Msa0553880:intron 40.0%
GAAGCCTGGATAATCCAAAT+TGG - chr4_1:51184870-51184889 None:intergenic 40.0%
!! CGTGCTGACAATTTTCTTTC+TGG + chr4_1:51185002-51185021 Msa0553880:intron 40.0%
GTTCTTTGTAGTGTGTGAGA+AGG + chr4_1:51185047-51185066 Msa0553880:intron 40.0%
CAACTTACAATGAGGTTAGC+TGG + chr4_1:51185088-51185107 Msa0553880:intron 40.0%
!! ATGATAGCTTTTGGGGATGA+AGG + chr4_1:51185201-51185220 Msa0553880:intron 40.0%
AGGAGAGAAAACCTTATCAG+GGG - chr4_1:51185437-51185456 None:intergenic 40.0%
!!! GACTTACTTTTTGTGGGGAT+TGG + chr4_1:51185508-51185527 Msa0553880:intron 40.0%
! TGATGCTCTGAATGTTCTCA+TGG + chr4_1:51185580-51185599 Msa0553880:intron 40.0%
TCTGAATGTTCTCATGGCAA+TGG + chr4_1:51185586-51185605 Msa0553880:intron 40.0%
! ATTTAACAGACAGAGCGTCT+TGG + chr4_1:51185808-51185827 Msa0553880:intron 40.0%
! TTTAACAGACAGAGCGTCTT+GGG + chr4_1:51185809-51185828 Msa0553880:intron 40.0%
GGCTCAGGAATAGAATTGAA+AGG + chr4_1:51185830-51185849 Msa0553880:intron 40.0%
AAGGAAATCATCCTATCTGC+GGG + chr4_1:51185849-51185868 Msa0553880:intron 40.0%
ACATAATTACCTCCGGTGAA+GGG - chr4_1:51186182-51186201 None:intergenic 40.0%
AACATAATTACCTCCGGTGA+AGG - chr4_1:51186183-51186202 None:intergenic 40.0%
GTACATGTTGTGCAGTGAAT+TGG - chr4_1:51186363-51186382 None:intergenic 40.0%
!! AGCGGGAAAAAGGTATTTCT+AGG - chr4_1:51186408-51186427 None:intergenic 40.0%
TATCTGCTCAATGCTATGTC+GGG + chr4_1:51186555-51186574 Msa0553880:intron 40.0%
GGGTCTATACGTTGAATTCT+TGG + chr4_1:51186575-51186594 Msa0553880:intron 40.0%
GGTAAAGCTTCACTTTCCTT+TGG + chr4_1:51186795-51186814 Msa0553880:intron 40.0%
CGTGATTATCTAGGTCTGAA+TGG + chr4_1:51186837-51186856 Msa0553880:intron 40.0%
GGAACTAGTGTCTCCTATTA+TGG + chr4_1:51186916-51186935 Msa0553880:intron 40.0%
TTGTCGTCATGCAACTCAAA+AGG - chr4_1:51187082-51187101 None:intergenic 40.0%
GTGCTTAAGGCAATGGAATT+TGG + chr4_1:51187106-51187125 Msa0553880:intron 40.0%
ACACACAATGTTACAGATGG+AGG + chr4_1:51187154-51187173 Msa0553880:intron 40.0%
CACACAATGTTACAGATGGA+GGG + chr4_1:51187155-51187174 Msa0553880:intron 40.0%
ACACAATGTTACAGATGGAG+GGG + chr4_1:51187156-51187175 Msa0553880:intron 40.0%
TTTAATATTCCAGGGAGTGG+AGG - chr4_1:51181739-51181758 None:intergenic 40.0%
TCCACTCCCTGGAATATTAA+AGG + chr4_1:51181738-51181757 Msa0553880:CDS 40.0%
CCAAGGTAGTAATTGATGGA+TGG - chr4_1:51187489-51187508 None:intergenic 40.0%
CCATCCATCAATTACTACCT+TGG + chr4_1:51187486-51187505 Msa0553880:three_prime_UTR 40.0%
TCTGCCAAGGTAGTAATTGA+TGG - chr4_1:51187493-51187512 None:intergenic 40.0%
TGGAGGAAAAAAATCTGCCA+AGG - chr4_1:51187506-51187525 None:intergenic 40.0%
TGATCTCTCTAGCTACAATG+CGG - chr4_1:51187550-51187569 None:intergenic 40.0%
AGAGATCAGAGATCATGGAA+TGG + chr4_1:51187562-51187581 Msa0553880:three_prime_UTR 40.0%
AGGAGTTATGCAGGTAGGAT+AGG + chr4_1:51176710-51176729 Msa0553880:five_prime_UTR 45.0%
! GGGGGCACAAAATACGAATA+CGG - chr4_1:51176769-51176788 None:intergenic 45.0%
!! AGGTTGTGATGGATTAACGG+CGG - chr4_1:51176822-51176841 None:intergenic 45.0%
TAGGGCACGCAATATGAAGA+TGG - chr4_1:51176916-51176935 None:intergenic 45.0%
ATCTTCATATTGCGTGCCCT+AGG + chr4_1:51176915-51176934 Msa0553880:five_prime_UTR 45.0%
TCTTCATATTGCGTGCCCTA+GGG + chr4_1:51176916-51176935 Msa0553880:five_prime_UTR 45.0%
ACGAAGGGAGAAAAACCCTA+GGG - chr4_1:51176934-51176953 None:intergenic 45.0%
AACGAAGGGAGAAAAACCCT+AGG - chr4_1:51176935-51176954 None:intergenic 45.0%
GAAACTGCTCACTACAGGAT+GGG + chr4_1:51176979-51176998 Msa0553880:exon 45.0%
GAAGAGGACGAGGAATTGAT+GGG + chr4_1:51177030-51177049 Msa0553880:CDS 45.0%
TTTGAGAGCAGCGTTATCAC+CGG - chr4_1:51177148-51177167 None:intergenic 45.0%
AAACGTTATGGAAGCAGCCA+TGG + chr4_1:51177541-51177560 Msa0553880:intron 45.0%
ATGGAAGCAGCCATGGTAAT+TGG + chr4_1:51177548-51177567 Msa0553880:intron 45.0%
! GTTATGGATTGTGGTCGTTG+CGG - chr4_1:51177822-51177841 None:intergenic 45.0%
! GGATGTTGCGTTATGGATTG+TGG - chr4_1:51177831-51177850 None:intergenic 45.0%
CTGTTACGGATGTTGCGTTA+TGG - chr4_1:51177838-51177857 None:intergenic 45.0%
CGCTAAGGATTTCGTGACTT+TGG - chr4_1:51177861-51177880 None:intergenic 45.0%
GGTACTGCGTAAACATTGAG+TGG - chr4_1:51177996-51178015 None:intergenic 45.0%
GGGGTGATAAGAATGGAAGA+GGG + chr4_1:51178041-51178060 Msa0553880:CDS 45.0%
ATAAGAATGGAAGAGGGCTC+CGG + chr4_1:51178047-51178066 Msa0553880:CDS 45.0%
!! AAAAGGGGTTGGCCTTGATT+TGG + chr4_1:51178868-51178887 Msa0553880:intron 45.0%
!! TATGGTGGACGATATTGTGG+AGG + chr4_1:51178953-51178972 Msa0553880:intron 45.0%
!!! TGGCGTGTTTGTTTTTCGAG+TGG + chr4_1:51179024-51179043 Msa0553880:intron 45.0%
! GTCTTTATGTTTCTGCTCGC+TGG + chr4_1:51179125-51179144 Msa0553880:intron 45.0%
!!! GCTGGTTTTGCTGTCTTGTT+GGG + chr4_1:51179143-51179162 Msa0553880:intron 45.0%
!! TTTTGCTGTCTTGTTGGGTG+CGG + chr4_1:51179148-51179167 Msa0553880:intron 45.0%
GGGACAAAAGAAACGAAACC+AGG - chr4_1:51179256-51179275 None:intergenic 45.0%
! GCAGCGTCTTTGTTGTCTTT+AGG + chr4_1:51179290-51179309 Msa0553880:intron 45.0%
! GCGTCTTTGTTGTCTTTAGG+TGG + chr4_1:51179293-51179312 Msa0553880:intron 45.0%
!!! GTTTTTTTGGGTTTCCTGGG+TGG + chr4_1:51179379-51179398 Msa0553880:intron 45.0%
! TTGTTCGAGCCTGTCTTTTG+TGG + chr4_1:51179501-51179520 Msa0553880:intron 45.0%
AATCGGTTGCCACAAAAGAC+AGG - chr4_1:51179513-51179532 None:intergenic 45.0%
GATGCACTAATAAGCTAGGG+TGG - chr4_1:51179556-51179575 None:intergenic 45.0%
GCGAGATGCACTAATAAGCT+AGG - chr4_1:51179560-51179579 None:intergenic 45.0%
GCTTATTAGTGCATCTCGCA+CGG + chr4_1:51179561-51179580 Msa0553880:intron 45.0%
CTTATTAGTGCATCTCGCAC+GGG + chr4_1:51179562-51179581 Msa0553880:intron 45.0%
!!! TTTTGGGATCAAGTTGTCCG+TGG + chr4_1:51179655-51179674 Msa0553880:intron 45.0%
TTAGCCTCAGAAACTGGTAG+TGG + chr4_1:51179684-51179703 Msa0553880:intron 45.0%
AAGTCCACTACCAGTTTCTG+AGG - chr4_1:51179691-51179710 None:intergenic 45.0%
ACAACATGAAATGGGTAGGC+AGG - chr4_1:51179718-51179737 None:intergenic 45.0%
ATAGGTGGCAGATGAACTTG+TGG + chr4_1:51179834-51179853 Msa0553880:intron 45.0%
ATATCACTCAGACTGGTACG+AGG - chr4_1:51180121-51180140 None:intergenic 45.0%
! CTGTATCTTTTCTCTCTGCG+TGG + chr4_1:51180170-51180189 Msa0553880:intron 45.0%
GGTAAAGATACACCTCCACT+GGG - chr4_1:51180664-51180683 None:intergenic 45.0%
AGGTAAAGATACACCTCCAC+TGG - chr4_1:51180665-51180684 None:intergenic 45.0%
!!! CCCTTTTTTGGGCATTCGTT+TGG + chr4_1:51180932-51180951 Msa0553880:intron 45.0%
GGGTTTATACGGAGAATTCC+TGG + chr4_1:51181058-51181077 Msa0553880:intron 45.0%
ATACGGAGAATTCCTGGTCA+TGG + chr4_1:51181064-51181083 Msa0553880:intron 45.0%
TCCGAGTGTTTGACCACAAT+AGG - chr4_1:51181410-51181429 None:intergenic 45.0%
!! CTCAAGGCAATGGATTTTGG+TGG + chr4_1:51181580-51181599 Msa0553880:CDS 45.0%
!! CAAGGCAATGGATTTTGGTG+GGG + chr4_1:51181582-51181601 Msa0553880:CDS 45.0%
!! AAGGCAATGGATTTTGGTGG+GGG + chr4_1:51181583-51181602 Msa0553880:CDS 45.0%
ACACACAATATTGCGGATGG+AGG + chr4_1:51181631-51181650 Msa0553880:CDS 45.0%
CACACAATATTGCGGATGGA+GGG + chr4_1:51181632-51181651 Msa0553880:CDS 45.0%
ACACAATATTGCGGATGGAG+GGG + chr4_1:51181633-51181652 Msa0553880:CDS 45.0%
GTCAGGCATGTATCAATCAC+AGG + chr4_1:51181669-51181688 Msa0553880:CDS 45.0%
GCCTTTAATATTCCAGGGAG+TGG - chr4_1:51181742-51181761 None:intergenic 45.0%
! GTCATCAGTACAGCTTTGGT+AGG + chr4_1:51181876-51181895 Msa0553880:three_prime_UTR 45.0%
! CTTTATCGTTTGGGGTAGAC+TGG + chr4_1:51181925-51181944 Msa0553880:three_prime_UTR 45.0%
TTCTCTCTTACTACATGGGG+GGG - chr4_1:51182030-51182049 None:intergenic 45.0%
ACAGGACAAGCAAGATGCAT+TGG - chr4_1:51182177-51182196 None:intergenic 45.0%
! TGTCCTGTTGCTTGTGTTGT+TGG + chr4_1:51182189-51182208 Msa0553880:three_prime_UTR 45.0%
ATGGACAGTACGAAACGGAA+GGG - chr4_1:51182227-51182246 None:intergenic 45.0%
TATGGACAGTACGAAACGGA+AGG - chr4_1:51182228-51182247 None:intergenic 45.0%
GAGTCGATCCAAACTTGACT+CGG + chr4_1:51182401-51182420 Msa0553880:intron 45.0%
AAACCTTGCGTAGGGATACT+AGG + chr4_1:51183171-51183190 Msa0553880:intron 45.0%
AACCTTGCGTAGGGATACTA+GGG + chr4_1:51183172-51183191 Msa0553880:intron 45.0%
AAATTGCAGAAGGGAAAGGG+CGG - chr4_1:51183323-51183342 None:intergenic 45.0%
TTGCAGCCCTCTCTCAATTA+AGG + chr4_1:51183437-51183456 Msa0553880:intron 45.0%
! AAGGTTTTGCTGCCAAACGA+TGG + chr4_1:51183456-51183475 Msa0553880:intron 45.0%
! AGGTTTTGCTGCCAAACGAT+GGG + chr4_1:51183457-51183476 Msa0553880:intron 45.0%
ACTACGATTTCGGGACAATC+AGG + chr4_1:51183517-51183536 Msa0553880:intron 45.0%
GGAGGTGATAAAAGTGGAAG+AGG + chr4_1:51183853-51183872 Msa0553880:intron 45.0%
GCCTAGCAAACTATGAAACC+TGG + chr4_1:51183952-51183971 Msa0553880:intron 45.0%
CACATCAGTACTAGGTATCC+AGG - chr4_1:51183973-51183992 None:intergenic 45.0%
!! CTGGATACCTAGTACTGATG+TGG + chr4_1:51183971-51183990 Msa0553880:intron 45.0%
CTCTCTCCTAGGTAACTAAC+GGG - chr4_1:51184567-51184586 None:intergenic 45.0%
GTTAGTTACCTAGGAGAGAG+AGG + chr4_1:51184567-51184586 Msa0553880:intron 45.0%
ATAGTTGCCCGTTCCTTAAC+GGG + chr4_1:51184598-51184617 Msa0553880:intron 45.0%
ATTGAGTCCCCGTTAAGGAA+CGG - chr4_1:51184609-51184628 None:intergenic 45.0%
GGAGTGGTCCTTGTTAAGTA+AGG + chr4_1:51184660-51184679 Msa0553880:intron 45.0%
! ACTTAGAGCATCTCCAATGG+GGG - chr4_1:51184688-51184707 None:intergenic 45.0%
GGGGTCAAAACACTGTTGAT+TGG - chr4_1:51185418-51185437 None:intergenic 45.0%
!!! CAGTGTTTTGACCCCTGATA+AGG + chr4_1:51185423-51185442 Msa0553880:intron 45.0%
GGTAAAGATACACCTCCACT+GGG - chr4_1:51180664-51180683 None:intergenic 45.0%
AGGTAAAGATACACCTCCAC+TGG - chr4_1:51180665-51180684 None:intergenic 45.0%
!! ATCAAAAGAGGCACCAACTG+AGG - chr4_1:51186279-51186298 None:intergenic 45.0%
TGCTTGCAAAAGCGGGAAAA+AGG - chr4_1:51186418-51186437 None:intergenic 45.0%
TGGTCGAGTTCACTTTACTC+CGG + chr4_1:51186516-51186535 Msa0553880:intron 45.0%
! ACTTTACTCCGGTTGCCTTT+TGG + chr4_1:51186527-51186546 Msa0553880:intron 45.0%
TACGTTGAATTCTTGGCCAC+AGG + chr4_1:51186582-51186601 Msa0553880:intron 45.0%
! GAAGAATTTGCTTGTCCTGC+TGG + chr4_1:51186631-51186650 Msa0553880:intron 45.0%
GGATGTGATATGGCTCTTAG+TGG + chr4_1:51186655-51186674 Msa0553880:intron 45.0%
TCCTCATGCAACTGTTGAAG+TGG + chr4_1:51186730-51186749 Msa0553880:intron 45.0%
TCCACTTCAACAGTTGCATG+AGG - chr4_1:51186734-51186753 None:intergenic 45.0%
CTCCTATTATGGCCGAATAG+AGG + chr4_1:51186927-51186946 Msa0553880:intron 45.0%
TGCCTCTATTCGGCCATAAT+AGG - chr4_1:51186932-51186951 None:intergenic 45.0%
TTATGGCCGAATAGAGGCAA+CGG + chr4_1:51186933-51186952 Msa0553880:intron 45.0%
AATGTTACAGATGGAGGGGA+AGG + chr4_1:51187160-51187179 Msa0553880:intron 45.0%
GCCTTTAATATTCCAGGGAG+TGG - chr4_1:51181742-51181761 None:intergenic 45.0%
GATCTCTCTAGCTACAATGC+GGG - chr4_1:51187549-51187568 None:intergenic 45.0%
GCTAGAGAGATCAGAGATCA+TGG + chr4_1:51187557-51187576 Msa0553880:three_prime_UTR 45.0%
GGAATGGAGTCCAACAACAT+AGG + chr4_1:51187578-51187597 Msa0553880:three_prime_UTR 45.0%
CATTTGATAGGGTCCTTGTG+AGG + chr4_1:51187702-51187721 Msa0553880:three_prime_UTR 45.0%
!!! TTTAATCAAATTTATATTTT+TGG - chr4_1:51180231-51180250 None:intergenic 5.0%
GTTATTGGCGAGGGAAAGAG+GGG - chr4_1:51176797-51176816 None:intergenic 50.0%
GGTTATTGGCGAGGGAAAGA+GGG - chr4_1:51176798-51176817 None:intergenic 50.0%
!! TTGTGATGGATTAACGGCGG+CGG - chr4_1:51176819-51176838 None:intergenic 50.0%
AGAGAGAGGTGAGGTTGTGA+TGG - chr4_1:51176833-51176852 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr4_1:51176845-51176864 None:intergenic 50.0%
CGAAACTGCTCACTACAGGA+TGG + chr4_1:51176978-51176997 Msa0553880:exon 50.0%
CGAAGAGGACGAGGAATTGA+TGG + chr4_1:51177029-51177048 Msa0553880:CDS 50.0%
!! GACGAGGAATTGATGGGTTG+TGG + chr4_1:51177036-51177055 Msa0553880:CDS 50.0%
GGTTGTGGAACTACGCTTTC+CGG + chr4_1:51177051-51177070 Msa0553880:CDS 50.0%
TTTGAATCGTGGTCGCGCTA+AGG - chr4_1:51177876-51177895 None:intergenic 50.0%
!!! AGCCCGTCGCTTTTTCTTCT+TGG - chr4_1:51178017-51178036 None:intergenic 50.0%
!! AAGAAAAAGCGACGGGCTGT+TGG + chr4_1:51178019-51178038 Msa0553880:CDS 50.0%
!! AGAAAAAGCGACGGGCTGTT+GGG + chr4_1:51178020-51178039 Msa0553880:CDS 50.0%
GCTGTTGGGGGTGATAAGAA+TGG + chr4_1:51178034-51178053 Msa0553880:CDS 50.0%
GGGGGTGATAAGAATGGAAG+AGG + chr4_1:51178040-51178059 Msa0553880:CDS 50.0%
GTCAGCTATGCACCCTTTCA+AGG - chr4_1:51179070-51179089 None:intergenic 50.0%
! TGAAAGGGTGCATAGCTGAC+TGG + chr4_1:51179070-51179089 Msa0553880:intron 50.0%
!!! CGCTGGTTTTGCTGTCTTGT+TGG + chr4_1:51179142-51179161 Msa0553880:intron 50.0%
! TCAGGTCCTCTGTTTTCAGC+TGG + chr4_1:51179173-51179192 Msa0553880:intron 50.0%
ACACAGCCAGCTGAAAACAG+AGG - chr4_1:51179182-51179201 None:intergenic 50.0%
! CTGTTTTCAGCTGGCTGTGT+CGG + chr4_1:51179182-51179201 Msa0553880:intron 50.0%
!!! TAGGTGGGGTGCTGTTTTTC+TGG + chr4_1:51179309-51179328 Msa0553880:intron 50.0%
!!! AGGTGGGGTGCTGTTTTTCT+GGG + chr4_1:51179310-51179329 Msa0553880:intron 50.0%
GGTGACAAACCACCATTGCT+TGG - chr4_1:51179874-51179893 None:intergenic 50.0%
! TGGTGGTTTGTCACCTGATC+AGG + chr4_1:51179879-51179898 Msa0553880:CDS 50.0%
GAGCATCATAGACCCTTCGA+CGG - chr4_1:51180033-51180052 None:intergenic 50.0%
AAGGAAAGCAGCCTATCTGC+AGG + chr4_1:51180286-51180305 Msa0553880:CDS 50.0%
AAAGATACACCTCCACTGGG+AGG - chr4_1:51180661-51180680 None:intergenic 50.0%
TGCTGTGATGTGGCTCCTAT+TGG + chr4_1:51181140-51181159 Msa0553880:intron 50.0%
TCCTCATGCAACTGTGGAAG+TGG + chr4_1:51181208-51181227 Msa0553880:CDS 50.0%
TCCACTTCCACAGTTGCATG+AGG - chr4_1:51181212-51181231 None:intergenic 50.0%
! TGGTGCTTTTGTCCCTGTGT+TGG + chr4_1:51181482-51181501 Msa0553880:intron 50.0%
TTGTCGTCATGCAGCTCGAA+AGG - chr4_1:51181553-51181572 None:intergenic 50.0%
AATATTGCGGATGGAGGGGA+AGG + chr4_1:51181637-51181656 Msa0553880:CDS 50.0%
CGAGTTAGCCGAGTCAAGTT+TGG - chr4_1:51182412-51182431 None:intergenic 50.0%
ATCCCTAGTATCCCTACGCA+AGG - chr4_1:51183177-51183196 None:intergenic 50.0%
TGCGTAGGGATACTAGGGAT+TGG + chr4_1:51183177-51183196 Msa0553880:intron 50.0%
AGCAGCACGGAATACGAATG+CGG - chr4_1:51183217-51183236 None:intergenic 50.0%
TAGATCTGATTGAGGGGGAG+CGG - chr4_1:51183256-51183275 None:intergenic 50.0%
! TAGTGAGGGATGGTGGTTAC+CGG - chr4_1:51183290-51183309 None:intergenic 50.0%
! GAAAGTACGGTAGTGAGGGA+TGG - chr4_1:51183300-51183319 None:intergenic 50.0%
AATTGCAGAAGGGAAAGGGC+GGG - chr4_1:51183322-51183341 None:intergenic 50.0%
!! CGTGAAATGATGGAGTGCTG+AGG - chr4_1:51183393-51183412 None:intergenic 50.0%
AGAGGGCTGCAATTCAGTTG+CGG - chr4_1:51183429-51183448 None:intergenic 50.0%
GCGATCTTGTTCCCATCGTT+TGG - chr4_1:51183471-51183490 None:intergenic 50.0%
TCTGAGAGCAGTGCTATCAC+CGG - chr4_1:51183611-51183630 None:intergenic 50.0%
! GATGATGATGCTGCATCCCA+AGG + chr4_1:51183652-51183671 Msa0553880:intron 50.0%
AGAGGCCAACAAAGAGCTAC+CGG + chr4_1:51183832-51183851 Msa0553880:intron 50.0%
GCTACCGGAGGTGATAAAAG+TGG + chr4_1:51183847-51183866 Msa0553880:intron 50.0%
ATCGCACCCACATCAGTACT+AGG - chr4_1:51183981-51184000 None:intergenic 50.0%
CAGTACAGTGCAGTGCAGTA+TGG - chr4_1:51184042-51184061 None:intergenic 50.0%
ATAAGGACCCTCTCTCTCCT+AGG - chr4_1:51184578-51184597 None:intergenic 50.0%
TAGTTGCCCGTTCCTTAACG+GGG + chr4_1:51184599-51184618 Msa0553880:intron 50.0%
TTGAGTCCCCGTTAAGGAAC+GGG - chr4_1:51184608-51184627 None:intergenic 50.0%
CTCCAATGGAGGGTCCTTAA+CGG + chr4_1:51184637-51184656 Msa0553880:intron 50.0%
TCCAATGGAGGGTCCTTAAC+GGG + chr4_1:51184638-51184657 Msa0553880:intron 50.0%
TGGGGGGTCCTTACTTAACA+AGG - chr4_1:51184671-51184690 None:intergenic 50.0%
GTTAAGTAAGGACCCCCCAT+TGG + chr4_1:51184672-51184691 Msa0553880:intron 50.0%
! CTTAGAGCATCTCCAATGGG+GGG - chr4_1:51184687-51184706 None:intergenic 50.0%
CGTTGCTAGCAAAGCACGTT+TGG + chr4_1:51184889-51184908 Msa0553880:intron 50.0%
GTAGGTGGCAGATGAACTTG+TGG + chr4_1:51185378-51185397 Msa0553880:intron 50.0%
AAAGATACACCTCCACTGGG+AGG - chr4_1:51180661-51180680 None:intergenic 50.0%
GTCTCCCATAACGTGAAACC+CGG - chr4_1:51186234-51186253 None:intergenic 50.0%
GAGGTTGGGTATAGCAGAAG+AGG - chr4_1:51186260-51186279 None:intergenic 50.0%
CTGCTATACCCAACCTCAGT+TGG + chr4_1:51186263-51186282 Msa0553880:intron 50.0%
!! AAGAGGCACCAACTGAGGTT+GGG - chr4_1:51186274-51186293 None:intergenic 50.0%
!! AAAGAGGCACCAACTGAGGT+TGG - chr4_1:51186275-51186294 None:intergenic 50.0%
! GAATTTGCTTGTCCTGCTGG+CGG + chr4_1:51186634-51186653 Msa0553880:intron 50.0%
!! TCATGTAGAGAGGTTCTGGG+AGG + chr4_1:51186965-51186984 Msa0553880:intron 50.0%
GTCAGGCATGCATCATTCAC+AGG + chr4_1:51187192-51187211 Msa0553880:intron 50.0%
GTTGACACGCTTGAAGCTGA+AGG - chr4_1:51187223-51187242 None:intergenic 50.0%
CGGTTATTGGCGAGGGAAAG+AGG - chr4_1:51176799-51176818 None:intergenic 55.0%
GGATTAACGGCGGCGGTTAT+TGG - chr4_1:51176812-51176831 None:intergenic 55.0%
GAGAGAGAGAGAGAGAGGTG+AGG - chr4_1:51176842-51176861 None:intergenic 55.0%
TTCCTCGTCCTCTTCGTCCA+CGG - chr4_1:51177025-51177044 None:intergenic 55.0%
ACTACGCTTTCCGGCCAATC+AGG + chr4_1:51177060-51177079 Msa0553880:CDS 55.0%
TCCTGCTCGTTGAGCCTGAT+TGG - chr4_1:51177077-51177096 None:intergenic 55.0%
! TGATGACGATGCTGCTTCCC+AGG + chr4_1:51177188-51177207 Msa0553880:CDS 55.0%
GACTCACGCAACTACTGCCT+GGG - chr4_1:51177208-51177227 None:intergenic 55.0%
AGACTCACGCAACTACTGCC+TGG - chr4_1:51177209-51177228 None:intergenic 55.0%
!! GAAAAAGCGACGGGCTGTTG+GGG + chr4_1:51178021-51178040 Msa0553880:CDS 55.0%
!! AAAAAGCGACGGGCTGTTGG+GGG + chr4_1:51178022-51178041 Msa0553880:CDS 55.0%
GGTGGACGATATTGTGGAGG+AGG + chr4_1:51178956-51178975 Msa0553880:intron 55.0%
CGATATTGTGGAGGAGGCCA+AGG + chr4_1:51178962-51178981 Msa0553880:intron 55.0%
CCACTTCCAAGCCAACACCT+TGG - chr4_1:51178982-51179001 None:intergenic 55.0%
!! CCAAGGTGTTGGCTTGGAAG+TGG + chr4_1:51178979-51178998 Msa0553880:intron 55.0%
! AGTGGTGTTGGAACCCTCGT+TGG + chr4_1:51179042-51179061 Msa0553880:intron 55.0%
! ACCCTCGTTGGTGCCTTGAA+AGG + chr4_1:51179054-51179073 Msa0553880:intron 55.0%
! CCCTTTCAAGGCACCAACGA+GGG - chr4_1:51179058-51179077 None:intergenic 55.0%
! CCCTCGTTGGTGCCTTGAAA+GGG + chr4_1:51179055-51179074 Msa0553880:intron 55.0%
! ACCCTTTCAAGGCACCAACG+AGG - chr4_1:51179059-51179078 None:intergenic 55.0%
!! TGTGTCGGTTATCCTCCCCT+GGG + chr4_1:51179197-51179216 Msa0553880:intron 55.0%
AAACCACAGCTGCAACCCAG+GGG - chr4_1:51179215-51179234 None:intergenic 55.0%
GAAACCACAGCTGCAACCCA+GGG - chr4_1:51179216-51179235 None:intergenic 55.0%
AGAAACCACAGCTGCAACCC+AGG - chr4_1:51179217-51179236 None:intergenic 55.0%
TGGGTTGCAGCTGTGGTTTC+TGG + chr4_1:51179216-51179235 Msa0553880:intron 55.0%
! GTTGCAGCTGTGGTTTCTGG+TGG + chr4_1:51179219-51179238 Msa0553880:intron 55.0%
!! AGCTGTGGTTTCTGGTGGTG+AGG + chr4_1:51179224-51179243 Msa0553880:intron 55.0%
!! TGGTTTCTGGTGGTGAGGCA+GGG + chr4_1:51179229-51179248 Msa0553880:intron 55.0%
!!! GGTGGGGTGCTGTTTTTCTG+GGG + chr4_1:51179311-51179330 Msa0553880:intron 55.0%
!!! GTGGGGTGCTGTTTTTCTGG+GGG + chr4_1:51179312-51179331 Msa0553880:intron 55.0%
!!! TGCTGTTTTTCTGGGGGTCC+AGG + chr4_1:51179318-51179337 Msa0553880:intron 55.0%
!! TGTTTTTCTGGGGGTCCAGG+TGG + chr4_1:51179321-51179340 Msa0553880:intron 55.0%
!! GTTTTTCTGGGGGTCCAGGT+GGG + chr4_1:51179322-51179341 Msa0553880:intron 55.0%
!! TCCAGGTGGGTTGTTTCGGT+TGG + chr4_1:51179335-51179354 Msa0553880:intron 55.0%
!! CCAGGTGGGTTGTTTCGGTT+GGG + chr4_1:51179336-51179355 Msa0553880:intron 55.0%
! GTGGGTTGTTTCGGTTGGGA+GGG + chr4_1:51179340-51179359 Msa0553880:intron 55.0%
! TTTGGGTTTCCTGGGTGGTG+AGG + chr4_1:51179384-51179403 Msa0553880:intron 55.0%
AGACACAGCGTCTTGGGCTT+AGG + chr4_1:51180252-51180271 Msa0553880:intron 55.0%
CTGCTCAAGCTCCTGCAGAT+AGG - chr4_1:51180300-51180319 None:intergenic 55.0%
AGCTCAGGAAATCCTCCCAG+TGG + chr4_1:51180646-51180665 Msa0553880:CDS 55.0%
TCAGGAAATCCTCCCAGTGG+AGG + chr4_1:51180649-51180668 Msa0553880:CDS 55.0%
! TCCTGTTGGCTGCTGTGATG+TGG + chr4_1:51181130-51181149 Msa0553880:intron 55.0%
GACACGTCCTCATGCAACTG+TGG + chr4_1:51181202-51181221 Msa0553880:intron 55.0%
GTCTTGGGAGCTAGTTAGGG+TGG + chr4_1:51181457-51181476 Msa0553880:intron 55.0%
! GGGGAAGGTTCTAGCATGTC+AGG + chr4_1:51181652-51181671 Msa0553880:CDS 55.0%
ATGGGGGGGAAGGAGAGTTA+CGG - chr4_1:51182016-51182035 None:intergenic 55.0%
CTCTTACTACATGGGGGGGA+AGG - chr4_1:51182026-51182045 None:intergenic 55.0%
AGATCTGATTGAGGGGGAGC+GGG - chr4_1:51183255-51183274 None:intergenic 55.0%
AGTACGGTAGTGAGGGATGG+TGG - chr4_1:51183297-51183316 None:intergenic 55.0%
! GCGGGAAAGTACGGTAGTGA+GGG - chr4_1:51183304-51183323 None:intergenic 55.0%
AGGGAAAGGGCGGGAAAGTA+CGG - chr4_1:51183313-51183332 None:intergenic 55.0%
GCAATCGTGCGTAGACGAAG+AGG + chr4_1:51183492-51183511 Msa0553880:intron 55.0%
GACAATCAGGCTCAACCAGC+AGG + chr4_1:51183530-51183549 Msa0553880:intron 55.0%
CACCTCCGGTAGCTCTTTGT+TGG - chr4_1:51183840-51183859 None:intergenic 55.0%
GTGGGACCCGTTAGTTACCT+AGG + chr4_1:51184558-51184577 Msa0553880:intron 55.0%
CGTTAAGGACCCTCCATTGG+AGG - chr4_1:51184639-51184658 None:intergenic 55.0%
CCAATGGAGGGTCCTTAACG+GGG + chr4_1:51184639-51184658 Msa0553880:intron 55.0%
ACAAGGACCACTCCCCGTTA+AGG - chr4_1:51184654-51184673 None:intergenic 55.0%
GCTTTGCTAGCAACGAAGCC+TGG - chr4_1:51184884-51184903 None:intergenic 55.0%
ATCCTATCTGCGGGAGCTAG+AGG + chr4_1:51185858-51185877 Msa0553880:intron 55.0%
! TTCCTCTAGCTCCCGCAGAT+AGG - chr4_1:51185863-51185882 None:intergenic 55.0%
!! AGCTCTGGAAATCCTCCCAG+TGG + chr4_1:51186068-51186087 Msa0553880:intron 55.0%
TCTGGAAATCCTCCCAGTGG+AGG + chr4_1:51186071-51186090 Msa0553880:intron 55.0%
TTCCCATAGGCTCCCTTCAC+CGG + chr4_1:51186167-51186186 Msa0553880:intron 55.0%
TCCAGCCGGGTTTCACGTTA+TGG + chr4_1:51186226-51186245 Msa0553880:intron 55.0%
CCAGCCGGGTTTCACGTTAT+GGG + chr4_1:51186227-51186246 Msa0553880:intron 55.0%
! TCCTGCTGGCGGATGTGATA+TGG + chr4_1:51186645-51186664 Msa0553880:intron 55.0%
!! GAGGTTCTGGGAGGCTGTTA+TGG + chr4_1:51186974-51186993 Msa0553880:intron 55.0%
! GGGGAAGGTTCTAGCATGTC+AGG + chr4_1:51181652-51181671 Msa0553880:CDS 55.0%
GACACGCTTGAAGCTGAAGG+AGG - chr4_1:51187220-51187239 None:intergenic 55.0%
TTGGTAGGTCAGCAGCAGCT+TGG + chr4_1:51187422-51187441 Msa0553880:three_prime_UTR 55.0%
AGACCACAGAGAGCCTCACA+AGG - chr4_1:51187718-51187737 None:intergenic 55.0%
TCGTCCACGGACGACTGATG+CGG - chr4_1:51177012-51177031 None:intergenic 60.0%
TCAGTCGTCCGTGGACGAAG+AGG + chr4_1:51177014-51177033 Msa0553880:CDS 60.0%
GCTCGTTGAGCCTGATTGGC+CGG - chr4_1:51177073-51177092 None:intergenic 60.0%
GCCAATCAGGCTCAACGAGC+AGG + chr4_1:51177073-51177092 Msa0553880:CDS 60.0%
ACTCCGGCTAGACGGTAACC+CGG - chr4_1:51177103-51177122 None:intergenic 60.0%
GTCTGCTCACTCCGGCTAGA+CGG - chr4_1:51177111-51177130 None:intergenic 60.0%
TAGCCGGAGTGAGCAGACCA+CGG + chr4_1:51177113-51177132 Msa0553880:CDS 60.0%
GAGAGCAGCGTTATCACCGG+CGG - chr4_1:51177145-51177164 None:intergenic 60.0%
TGTGGAGGAGGCCAAGGTGT+TGG + chr4_1:51178968-51178987 Msa0553880:intron 60.0%
!! AGGAGGCCAAGGTGTTGGCT+TGG + chr4_1:51178973-51178992 Msa0553880:intron 60.0%
CTTGGCTTCGTTGCTGCTGC+TGG + chr4_1:51179103-51179122 Msa0553880:intron 60.0%
! GTCTTGTTGGGTGCGGCTTC+AGG + chr4_1:51179155-51179174 Msa0553880:intron 60.0%
!! CTGTGTCGGTTATCCTCCCC+TGG + chr4_1:51179196-51179215 Msa0553880:intron 60.0%
!! GTGGTTTCTGGTGGTGAGGC+AGG + chr4_1:51179228-51179247 Msa0553880:intron 60.0%
!! GGTTTCTGGTGGTGAGGCAG+GGG + chr4_1:51179230-51179249 Msa0553880:intron 60.0%
!! GGGGTCCAGGTGGGTTGTTT+CGG + chr4_1:51179331-51179350 Msa0553880:intron 60.0%
CCCAACCGAAACAACCCACC+TGG - chr4_1:51179339-51179358 None:intergenic 60.0%
!! GGTGGGTTGTTTCGGTTGGG+AGG + chr4_1:51179339-51179358 Msa0553880:intron 60.0%
TGTTTCGGTTGGGAGGGAGC+AGG + chr4_1:51179346-51179365 Msa0553880:intron 60.0%
TTTCCTGGGTGGTGAGGCTG+TGG + chr4_1:51179390-51179409 Msa0553880:intron 60.0%
ATACCACAGCCTCACCACCC+AGG - chr4_1:51179396-51179415 None:intergenic 60.0%
GTGAGGCTGTGGTATGCGTG+CGG + chr4_1:51179401-51179420 Msa0553880:intron 60.0%
GCCACATCACAGCAGCCAAC+AGG - chr4_1:51181134-51181153 None:intergenic 60.0%
GGGAGCTAGTTAGGGTGGTG+TGG + chr4_1:51181462-51181481 Msa0553880:intron 60.0%
CCAGGGAGTGGAGGTGATGT+CGG - chr4_1:51181730-51181749 None:intergenic 60.0%
GATCTGATTGAGGGGGAGCG+GGG - chr4_1:51183254-51183273 None:intergenic 60.0%
! AGGGATGGTGGTTACCGGTG+AGG - chr4_1:51183285-51183304 None:intergenic 60.0%
! GGCGGGAAAGTACGGTAGTG+AGG - chr4_1:51183305-51183324 None:intergenic 60.0%
GAGAGCAGTGCTATCACCGG+CGG - chr4_1:51183608-51183627 None:intergenic 60.0%
GGCCAACAAAGAGCTACCGG+AGG + chr4_1:51183835-51183854 Msa0553880:intron 60.0%
CCCCGTTAAGGACCCTCCAT+TGG - chr4_1:51184642-51184661 None:intergenic 60.0%
! AGACAGAGCGTCTTGGGCTC+AGG + chr4_1:51185815-51185834 Msa0553880:intron 60.0%
CTCCGGTGAAGGGAGCCTAT+GGG - chr4_1:51186172-51186191 None:intergenic 60.0%
ACGTGAAACCCGGCTGGAAG+AGG - chr4_1:51186224-51186243 None:intergenic 60.0%
CCCATAACGTGAAACCCGGC+TGG - chr4_1:51186230-51186249 None:intergenic 60.0%
GCCATATCACATCCGCCAGC+AGG - chr4_1:51186649-51186668 None:intergenic 60.0%
GGGAGTGGAGGTGATGTTGG+AGG - chr4_1:51187250-51187269 None:intergenic 60.0%
CCAGGGAGTGGAGGTGATGT+TGG - chr4_1:51181730-51181749 None:intergenic 60.0%
CCAACATCACCTCCACTCCC+TGG + chr4_1:51187250-51187269 Msa0553880:intron 60.0%
GGTCCTTGTGAGGCTCTCTG+TGG + chr4_1:51187712-51187731 Msa0553880:three_prime_UTR 60.0%
AGGGAAAGAGGGGAACGCGG+GGG - chr4_1:51176787-51176806 None:intergenic 65.0%
GAGGGAAAGAGGGGAACGCG+GGG - chr4_1:51176788-51176807 None:intergenic 65.0%
CGAGGGAAAGAGGGGAACGC+GGG - chr4_1:51176789-51176808 None:intergenic 65.0%
GCGAGGGAAAGAGGGGAACG+CGG - chr4_1:51176790-51176809 None:intergenic 65.0%
ACGGCGGCGGTTATTGGCGA+GGG - chr4_1:51176806-51176825 None:intergenic 65.0%
AACGGCGGCGGTTATTGGCG+AGG - chr4_1:51176807-51176826 None:intergenic 65.0%
GTCCGTGGACGAAGAGGACG+AGG + chr4_1:51177020-51177039 Msa0553880:CDS 65.0%
! GGCTCAACGAGCAGGAGTGC+CGG + chr4_1:51177081-51177100 Msa0553880:CDS 65.0%
!! GCTCAACGAGCAGGAGTGCC+GGG + chr4_1:51177082-51177101 Msa0553880:CDS 65.0%
GTGCCGGGTTACCGTCTAGC+CGG + chr4_1:51177097-51177116 Msa0553880:CDS 65.0%
AGCCGGAGTGAGCAGACCAC+GGG + chr4_1:51177114-51177133 Msa0553880:CDS 65.0%
TCCCCGTGGTCTGCTCACTC+CGG - chr4_1:51177119-51177138 None:intergenic 65.0%
CGCTGCAGCAGCTGCCAGTA+GGG - chr4_1:51179276-51179295 None:intergenic 65.0%
ACGCTGCAGCAGCTGCCAGT+AGG - chr4_1:51179277-51179296 None:intergenic 65.0%
GTGCATCTCGCACGGGCTTG+TGG + chr4_1:51179569-51179588 Msa0553880:intron 65.0%
GGGAGTGGAGGTGATGTCGG+AGG - chr4_1:51181727-51181746 None:intergenic 65.0%
CCGACATCACCTCCACTCCC+TGG + chr4_1:51181727-51181746 Msa0553880:CDS 65.0%
! GGCTCAACCAGCAGGAGTGC+CGG + chr4_1:51183538-51183557 Msa0553880:intron 65.0%
!! TCAACCAGCAGGAGTGCCGG+CGG + chr4_1:51183541-51183560 Msa0553880:intron 65.0%
GTCTGCTCGCTCCGGCTAGA+CGG - chr4_1:51183574-51183593 None:intergenic 65.0%
AGCCGGAGCGAGCAGACGAT+CGG + chr4_1:51183577-51183596 Msa0553880:intron 65.0%
TCCCGATCGTCTGCTCGCTC+CGG - chr4_1:51183582-51183601 None:intergenic 65.0%
GGAGGGTCCTTAACGGGGAG+TGG + chr4_1:51184644-51184663 Msa0553880:intron 65.0%
CCTCCGGTGAAGGGAGCCTA+TGG - chr4_1:51186173-51186192 None:intergenic 65.0%
CCATAGGCTCCCTTCACCGG+AGG + chr4_1:51186170-51186189 Msa0553880:intron 65.0%
ACGTGGGCACCTCTTCCAGC+CGG + chr4_1:51186212-51186231 Msa0553880:intron 65.0%
GCAGCCGCATCAGTCGTCCG+TGG + chr4_1:51177005-51177024 Msa0553880:CDS 70.0%
GCCGGAGTGAGCAGACCACG+GGG + chr4_1:51177115-51177134 Msa0553880:CDS 70.0%
CCACAGCTGCAACCCAGGGG+AGG - chr4_1:51179212-51179231 None:intergenic 70.0%
CCTCCCCTGGGTTGCAGCTG+TGG + chr4_1:51179209-51179228 Msa0553880:intron 70.0%
GCCGGAGCGAGCAGACGATC+GGG + chr4_1:51183578-51183597 Msa0553880:intron 70.0%
CAGACGATCGGGACAGCCGC+CGG + chr4_1:51183589-51183608 Msa0553880:intron 70.0%
CGTGGGCACCTCTTCCAGCC+GGG + chr4_1:51186213-51186232 Msa0553880:intron 70.0%
CAGACCACGGGGACAGCCGC+CGG + chr4_1:51177126-51177145 Msa0553880:CDS 75.0%
ATCACCGGCGGCTGTCCCCG+TGG - chr4_1:51177133-51177152 None:intergenic 75.0%
! CTGGTGGTGAGGCAGGGGCC+TGG + chr4_1:51179235-51179254 Msa0553880:intron 75.0%
!! ACCAGCAGGAGTGCCGGCGG+CGG + chr4_1:51183544-51183563 Msa0553880:intron 75.0%
GCTAGACGGCAACCCGCCGC+CGG - chr4_1:51183560-51183579 None:intergenic 75.0%
!! GCGGCGGGTTGCCGTCTAGC+CGG + chr4_1:51183560-51183579 Msa0553880:intron 75.0%
!!! CCAGCAGGAGTGCCGGCGGC+GGG + chr4_1:51183545-51183564 Msa0553880:intron 80.0%
! CCCGCCGCCGGCACTCCTGC+TGG - chr4_1:51183548-51183567 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 51176704 51187749 51176704 ID=Msa0553880;Name=Msa0553880
chr4_1 mRNA 51176704 51187749 51176704 ID=Msa0553880-mRNA-1;Parent=Msa0553880;Name=Msa0553880-mRNA-1;_AED=0.28;_eAED=0.28;_QI=293|0.77|0.8|1|0.88|0.8|10|915|343
chr4_1 exon 51176704 51177220 51176704 ID=Msa0553880-mRNA-1:exon:14567;Parent=Msa0553880-mRNA-1
chr4_1 exon 51178012 51178085 51178012 ID=Msa0553880-mRNA-1:exon:14568;Parent=Msa0553880-mRNA-1
chr4_1 exon 51178573 51178583 51178573 ID=Msa0553880-mRNA-1:exon:14569;Parent=Msa0553880-mRNA-1
chr4_1 exon 51179838 51179900 51179838 ID=Msa0553880-mRNA-1:exon:14570;Parent=Msa0553880-mRNA-1
chr4_1 exon 51180007 51180153 51180007 ID=Msa0553880-mRNA-1:exon:14571;Parent=Msa0553880-mRNA-1
chr4_1 exon 51180254 51180322 51180254 ID=Msa0553880-mRNA-1:exon:14572;Parent=Msa0553880-mRNA-1
chr4_1 exon 51180565 51180699 51180565 ID=Msa0553880-mRNA-1:exon:14573;Parent=Msa0553880-mRNA-1
chr4_1 exon 51181203 51181273 51181203 ID=Msa0553880-mRNA-1:exon:14574;Parent=Msa0553880-mRNA-1
chr4_1 exon 51181546 51182231 51181546 ID=Msa0553880-mRNA-1:exon:14575;Parent=Msa0553880-mRNA-1
chr4_1 exon 51187283 51187749 51187283 ID=Msa0553880-mRNA-1:exon:14576;Parent=Msa0553880-mRNA-1
chr4_1 five_prime_UTR 51176704 51176996 51176704 ID=Msa0553880-mRNA-1:five_prime_utr;Parent=Msa0553880-mRNA-1
chr4_1 CDS 51176997 51177220 51176997 ID=Msa0553880-mRNA-1:cds;Parent=Msa0553880-mRNA-1
chr4_1 CDS 51178012 51178085 51178012 ID=Msa0553880-mRNA-1:cds;Parent=Msa0553880-mRNA-1
chr4_1 CDS 51178573 51178583 51178573 ID=Msa0553880-mRNA-1:cds;Parent=Msa0553880-mRNA-1
chr4_1 CDS 51179838 51179900 51179838 ID=Msa0553880-mRNA-1:cds;Parent=Msa0553880-mRNA-1
chr4_1 CDS 51180007 51180153 51180007 ID=Msa0553880-mRNA-1:cds;Parent=Msa0553880-mRNA-1
chr4_1 CDS 51180254 51180322 51180254 ID=Msa0553880-mRNA-1:cds;Parent=Msa0553880-mRNA-1
chr4_1 CDS 51180565 51180699 51180565 ID=Msa0553880-mRNA-1:cds;Parent=Msa0553880-mRNA-1
chr4_1 CDS 51181203 51181273 51181203 ID=Msa0553880-mRNA-1:cds;Parent=Msa0553880-mRNA-1
chr4_1 CDS 51181546 51181783 51181546 ID=Msa0553880-mRNA-1:cds;Parent=Msa0553880-mRNA-1
chr4_1 three_prime_UTR 51181784 51182231 51181784 ID=Msa0553880-mRNA-1:three_prime_utr;Parent=Msa0553880-mRNA-1
chr4_1 three_prime_UTR 51187283 51187749 51187283 ID=Msa0553880-mRNA-1:three_prime_utr;Parent=Msa0553880-mRNA-1
Gene Sequence

>Msa0553880

ATGGGAACGCAGCCGCATCAGTCGTCCGTGGACGAAGAGGACGAGGAATTGATGGGTTGTGGAACTACGCTTTCCGGCCAATCAGGCTCAACGAGCAGGAGTGCCGGGTTACCGTCTAGCCGGAGTGAGCAGACCACGGGGACAGCCGCCGGTGATAACGCTGCTCTCAAATTGAATCATCTTGATATACATGATGACGATGCTGCTTCCCAGGCAGTAGTTGCTACCAAGAAGAAAAAGCGACGGGCTGTTGGGGGTGATAAGAATGGAAGAGGGCTCCGGCAATTTAGTATGAAAGTGTGTGAGAAGGTGGCAGATGAACTTGTGGCTGAATTTTCTGATCCAAGCAATGGTGGTTTGTCACCTGATCAGCAACAATATGATGAGAAAAACATCCGTCGAAGGGTCTATGATGCTCTGAATGTTCTTATGGCTATGGATATTATTTCCAAGGATAAAAAAGAAATACAATGGAAGGGTCTTCCTCGTACCAGTCTGAGTGATATTGAAGAACTAAAGACACAGCGTCTTGGGCTTAGGAGTAGAATTGAAAGGAAAGCAGCCTATCTGCAGGAGCTTGAGCAGCAATTTCTGTTTGCTAACTGCTTTTATTATTGCTACAAGTTTGTAGGTCTTCAGAACCTTATTCAACGAAATGAACAATTATATAGCTCAGGAAATCCTCCCAGTGGAGGTGTATCTTTACCTTTTATTCTGGTTCAGACACGTCCTCATGCAACTGTGGAAGTGGAAATATCAGAAGACATGCAGCTTGTTCATTTTGATTTCAATAGTTCTCCTTTCGAGCTGCATGACGACAATTATGTTCTCAAGGCAATGGATTTTGGTGGGGGTGAGAGACCACAGAGTGACAATGTTACACACAATATTGCGGATGGAGGGGAAGGTTCTAGCATGTCAGGCATGTATCAATCACAGGTTCCTCAGTCAGTTTCAAACATGTTAGTTAGGCCTCCGACATCACCTCCACTCCCTGGAATATTAAAGGCAAGAGTTAAGCAAGAGAATTGA
Protein sequence

>Msa0553880

MGTQPHQSSVDEEDEELMGCGTTLSGQSGSTSRSAGLPSSRSEQTTGTAAGDNAALKLNHLDIHDDDAASQAVVATKKKKRRAVGGDKNGRGLRQFSMKVCEKVADELVAEFSDPSNGGLSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLSDIEELKTQRLGLRSRIERKAAYLQELEQQFLFANCFYYCYKFVGLQNLIQRNEQLYSSGNPPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSSPFELHDDNYVLKAMDFGGGERPQSDNVTHNIADGGEGSSMSGMYQSQVPQSVSNMLVRPPTSPPLPGILKARVKQEN*