Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554010 | XP_024638164.1 | 91.205 | 523 | 13 | 2 | 44 | 563 | 1 | 493 | 0.0 | 959 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554010 | sp|Q84T61|HSFA1_ORYSJ | 47.114 | 537 | 206 | 18 | 46 | 560 | 25 | 505 | 6.65e-136 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554010 | G7JSS3 | 91.205 | 523 | 13 | 2 | 44 | 563 | 1 | 493 | 0.0 | 959 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0554010 | TF | HSF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554010 | MtrunA17_Chr4g0039891 | 91.205 | 523 | 13 | 2 | 44 | 563 | 1 | 493 | 0.0 | 959 |
| Msa0554010 | MtrunA17_Chr5g0410881 | 43.643 | 527 | 218 | 17 | 54 | 559 | 31 | 499 | 3.83e-119 | 361 |
| Msa0554010 | MtrunA17_Chr7g0260331 | 45.255 | 274 | 112 | 4 | 22 | 290 | 11 | 251 | 3.33e-67 | 222 |
| Msa0554010 | MtrunA17_Chr3g0135831 | 47.431 | 253 | 91 | 4 | 54 | 306 | 45 | 255 | 1.15e-66 | 221 |
| Msa0554010 | MtrunA17_Chr1g0204741 | 48.333 | 240 | 83 | 5 | 54 | 290 | 39 | 240 | 2.86e-62 | 208 |
| Msa0554010 | MtrunA17_Chr8g0392001 | 39.262 | 298 | 143 | 4 | 55 | 351 | 22 | 282 | 9.76e-58 | 197 |
| Msa0554010 | MtrunA17_Chr1g0185131 | 44.578 | 249 | 87 | 5 | 50 | 294 | 26 | 227 | 8.79e-56 | 191 |
| Msa0554010 | MtrunA17_Chr4g0071051 | 44.048 | 252 | 89 | 6 | 54 | 299 | 100 | 305 | 7.57e-54 | 188 |
| Msa0554010 | MtrunA17_Chr6g0467041 | 36.965 | 257 | 120 | 4 | 35 | 291 | 2 | 216 | 1.49e-47 | 169 |
| Msa0554010 | MtrunA17_Chr8g0378061 | 39.831 | 236 | 100 | 4 | 56 | 291 | 23 | 216 | 1.01e-46 | 171 |
| Msa0554010 | MtrunA17_Chr8g0379701 | 38.605 | 215 | 94 | 3 | 53 | 266 | 10 | 187 | 2.09e-45 | 165 |
| Msa0554010 | MtrunA17_Chr6g0485571 | 38.843 | 242 | 106 | 7 | 50 | 291 | 6 | 205 | 1.04e-43 | 159 |
| Msa0554010 | MtrunA17_Chr2g0330821 | 39.535 | 215 | 90 | 2 | 55 | 269 | 79 | 253 | 2.88e-43 | 158 |
| Msa0554010 | MtrunA17_Chr2g0284481 | 34.247 | 219 | 103 | 3 | 53 | 267 | 13 | 194 | 2.47e-38 | 145 |
| Msa0554010 | MtrunA17_Chr1g0179311 | 35.685 | 241 | 128 | 6 | 145 | 382 | 14 | 230 | 1.10e-35 | 137 |
| Msa0554010 | MtrunA17_Chr5g0397881 | 44.138 | 145 | 46 | 2 | 32 | 176 | 6 | 115 | 2.52e-33 | 130 |
| Msa0554010 | MtrunA17_Chr3g0134031 | 36.564 | 227 | 65 | 5 | 52 | 229 | 21 | 217 | 2.03e-32 | 128 |
| Msa0554010 | MtrunA17_Chr6g0472421 | 48.361 | 122 | 33 | 1 | 55 | 176 | 33 | 124 | 5.36e-31 | 123 |
| Msa0554010 | MtrunA17_Chr5g0402291 | 35.371 | 229 | 86 | 5 | 55 | 251 | 9 | 207 | 1.31e-30 | 121 |
| Msa0554010 | MtrunA17_Chr8g0375041 | 37.838 | 185 | 75 | 3 | 55 | 230 | 9 | 162 | 1.21e-29 | 117 |
| Msa0554010 | MtrunA17_Chr1g0203601 | 45.082 | 122 | 37 | 1 | 55 | 176 | 18 | 109 | 3.22e-29 | 117 |
| Msa0554010 | MtrunA17_Chr5g0441531 | 45.528 | 123 | 37 | 1 | 55 | 177 | 25 | 117 | 1.19e-27 | 112 |
| Msa0554010 | MtrunA17_Chr7g0257331 | 35.556 | 180 | 81 | 3 | 55 | 230 | 22 | 170 | 9.32e-25 | 103 |
| Msa0554010 | MtrunA17_Chr4g0047421 | 40.945 | 127 | 41 | 2 | 55 | 177 | 33 | 129 | 8.80e-24 | 99.8 |
| Msa0554010 | MtrunA17_Chr2g0330841 | 35.570 | 149 | 85 | 2 | 143 | 291 | 39 | 176 | 3.41e-22 | 99.0 |
| Msa0554010 | MtrunA17_Chr1g0179321 | 62.903 | 62 | 23 | 0 | 53 | 114 | 47 | 108 | 4.40e-22 | 91.3 |
| Msa0554010 | MtrunA17_Chr4g0023771 | 56.944 | 72 | 30 | 1 | 53 | 123 | 13 | 84 | 2.91e-21 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554010 | AT5G16820.1 | 45.817 | 526 | 194 | 14 | 53 | 559 | 25 | 478 | 4.79e-126 | 379 |
| Msa0554010 | AT5G16820.2 | 45.817 | 526 | 194 | 14 | 53 | 559 | 25 | 478 | 4.79e-126 | 379 |
| Msa0554010 | AT3G02990.1 | 44.685 | 508 | 217 | 7 | 53 | 559 | 21 | 465 | 7.47e-122 | 367 |
| Msa0554010 | AT1G32330.2 | 41.210 | 529 | 217 | 15 | 46 | 559 | 28 | 477 | 2.44e-107 | 330 |
| Msa0554010 | AT1G32330.1 | 41.210 | 529 | 217 | 15 | 46 | 559 | 28 | 477 | 3.07e-107 | 330 |
| Msa0554010 | AT4G17750.1 | 41.353 | 532 | 207 | 19 | 49 | 559 | 46 | 493 | 2.11e-101 | 315 |
| Msa0554010 | AT2G26150.1 | 50.417 | 240 | 81 | 3 | 54 | 291 | 43 | 246 | 1.10e-72 | 236 |
| Msa0554010 | AT2G26150.4 | 50.417 | 240 | 81 | 3 | 54 | 291 | 43 | 246 | 1.10e-72 | 236 |
| Msa0554010 | AT3G22830.1 | 49.160 | 238 | 90 | 2 | 54 | 290 | 60 | 267 | 1.56e-66 | 222 |
| Msa0554010 | AT1G67970.1 | 42.105 | 266 | 112 | 5 | 53 | 317 | 17 | 241 | 6.57e-56 | 192 |
| Msa0554010 | AT5G03720.2 | 39.405 | 269 | 112 | 6 | 53 | 316 | 53 | 275 | 3.85e-54 | 189 |
| Msa0554010 | AT5G03720.1 | 39.405 | 269 | 112 | 6 | 53 | 316 | 53 | 275 | 3.85e-54 | 189 |
| Msa0554010 | AT3G51910.1 | 38.866 | 247 | 96 | 4 | 47 | 289 | 21 | 216 | 5.94e-50 | 174 |
| Msa0554010 | AT4G13980.1 | 37.450 | 251 | 114 | 4 | 56 | 305 | 24 | 232 | 8.74e-49 | 176 |
| Msa0554010 | AT2G26150.3 | 51.515 | 165 | 72 | 2 | 129 | 291 | 33 | 191 | 2.26e-46 | 164 |
| Msa0554010 | AT2G26150.2 | 51.515 | 165 | 72 | 2 | 129 | 291 | 33 | 191 | 2.26e-46 | 164 |
| Msa0554010 | AT3G24520.1 | 37.190 | 242 | 91 | 5 | 52 | 291 | 14 | 196 | 3.44e-45 | 162 |
| Msa0554010 | AT5G43840.1 | 35.055 | 271 | 103 | 7 | 54 | 317 | 16 | 220 | 5.90e-43 | 155 |
| Msa0554010 | AT4G18880.1 | 34.203 | 345 | 171 | 8 | 47 | 388 | 7 | 298 | 1.03e-42 | 158 |
| Msa0554010 | AT5G54070.1 | 34.940 | 249 | 112 | 4 | 52 | 295 | 68 | 271 | 8.58e-41 | 150 |
| Msa0554010 | AT3G63350.1 | 37.778 | 225 | 98 | 3 | 55 | 278 | 28 | 211 | 4.98e-40 | 147 |
| Msa0554010 | AT5G45710.3 | 36.078 | 255 | 111 | 6 | 53 | 305 | 11 | 215 | 5.48e-40 | 149 |
| Msa0554010 | AT5G45710.1 | 36.078 | 255 | 111 | 6 | 53 | 305 | 11 | 215 | 5.48e-40 | 149 |
| Msa0554010 | AT1G46264.1 | 35.371 | 229 | 77 | 4 | 42 | 229 | 21 | 219 | 5.16e-35 | 135 |
| Msa0554010 | AT4G36990.1 | 42.857 | 161 | 48 | 3 | 44 | 202 | 1 | 119 | 2.90e-30 | 120 |
| Msa0554010 | AT5G62020.1 | 45.968 | 124 | 37 | 1 | 55 | 178 | 23 | 116 | 2.99e-30 | 120 |
| Msa0554010 | AT4G11660.1 | 44.262 | 122 | 38 | 1 | 55 | 176 | 59 | 150 | 4.98e-28 | 116 |
| Msa0554010 | AT2G41690.1 | 41.538 | 130 | 46 | 1 | 54 | 183 | 39 | 138 | 6.16e-26 | 107 |
| Msa0554010 | AT4G18870.1 | 35.043 | 117 | 45 | 4 | 56 | 172 | 14 | 99 | 3.42e-14 | 73.9 |
Find 124 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAGGTTCCACCTATTTC+TGG | 0.099338 | 4_1:-51279367 | Msa0554010:CDS |
| AGTTCATCCACCCAAGTTTC+TGG | 0.190167 | 4_1:-51279400 | Msa0554010:CDS |
| CAGGAATCAATGATGAATTC+TGG | 0.249447 | 4_1:-51279012 | Msa0554010:CDS |
| AGCACACCAAGACAATATTT+TGG | 0.280307 | 4_1:-51279215 | Msa0554010:CDS |
| TTTAGGCCAAGCCCACTTAC+TGG | 0.290833 | 4_1:-51278980 | Msa0554010:CDS |
| AAATGTAGTTCTCTAGGATA+TGG | 0.296292 | 4_1:-51278941 | Msa0554010:CDS |
| TGTTGAATCTTCTTTGCTAA+TGG | 0.299601 | 4_1:+51278896 | None:intergenic |
| GGATGTGATATCAGCTGTTT+TGG | 0.314761 | 4_1:-51279098 | Msa0554010:CDS |
| TTGTTGTGTTTGAAATATTT+AGG | 0.323777 | 4_1:+51280820 | None:intergenic |
| ATACATGACTGCCCAGAAAT+AGG | 0.325547 | 4_1:+51279355 | None:intergenic |
| TTTGGATGGGACACAGTCTT+TGG | 0.329794 | 4_1:-51279080 | Msa0554010:CDS |
| AAGAGGATTATGTGGATTCT+TGG | 0.333992 | 4_1:+51279588 | None:intergenic |
| CAACCGAATCGATCGTTTCA+TGG | 0.334490 | 4_1:-51280903 | Msa0554010:CDS |
| CTATTGGTCATACAACTTAC+AGG | 0.350342 | 4_1:+51279313 | None:intergenic |
| TGTGTGGAAGTGGGTAAGTT+TGG | 0.353975 | 4_1:-51279898 | Msa0554010:CDS |
| TTGGTGTGCTGCTGTAAATT+CGG | 0.355088 | 4_1:+51279228 | None:intergenic |
| CTGAGGTTCCACCTATTTCT+GGG | 0.367826 | 4_1:-51279366 | Msa0554010:CDS |
| TCTTTGCTAATGGCAATTCC+TGG | 0.373655 | 4_1:+51278906 | None:intergenic |
| TTTGCAGCCTCATTAATAGA+AGG | 0.376695 | 4_1:+51279541 | None:intergenic |
| CATGAATAGTCCGGGCTTCA+TGG | 0.377627 | 4_1:-51279704 | Msa0554010:CDS |
| AATCCACATAATCCTCTTGA+TGG | 0.386726 | 4_1:-51279583 | Msa0554010:CDS |
| CATTCCTTCCACGAAACTCT+TGG | 0.390343 | 4_1:+51280406 | None:intergenic |
| CCTAAGCAAAACCTACGATA+TGG | 0.391487 | 4_1:-51280938 | Msa0554010:CDS |
| ATCATTGATTCCTGGAAGCT+TGG | 0.394606 | 4_1:+51279021 | None:intergenic |
| ATATTTAGGCAAGATGTGTT+TGG | 0.394875 | 4_1:+51280834 | None:intergenic |
| CAGAATTCATCATTGATTCC+TGG | 0.402186 | 4_1:+51279013 | None:intergenic |
| GTGTCTCCAGTAAGTGGGCT+TGG | 0.409905 | 4_1:+51278974 | None:intergenic |
| CGGTGAGAATGATGATGAAT+TGG | 0.410275 | 4_1:-51279119 | Msa0554010:CDS |
| CATGAAGCCCGGACTATTCA+TGG | 0.411920 | 4_1:+51279705 | None:intergenic |
| TGAGCGAATTCCCAGTGGTC+GGG | 0.412817 | 4_1:+51280039 | None:intergenic |
| AACTATCTTCTTCCTGCCCC+TGG | 0.417448 | 4_1:+51279617 | None:intergenic |
| GATGAACTACTGCTATCTAA+TGG | 0.419987 | 4_1:+51279415 | None:intergenic |
| ATTTGTTAAAGAATATCAAT+AGG | 0.421836 | 4_1:-51279990 | Msa0554010:CDS |
| CAATGCATCAAGGTTCTTGA+TGG | 0.429654 | 4_1:+51279465 | None:intergenic |
| GTGTGGAAGTGGGTAAGTTT+GGG | 0.436120 | 4_1:-51279897 | Msa0554010:CDS |
| AACCGAATCGATCGTTTCAT+GGG | 0.436953 | 4_1:-51280902 | Msa0554010:CDS |
| CAAGATGTGTTTGGAGAAAT+CGG | 0.437903 | 4_1:+51280843 | None:intergenic |
| GTTGCCCAACATTTACCAAT+TGG | 0.441846 | 4_1:+51279782 | None:intergenic |
| AATGAAAATTCCAAGCTTCC+AGG | 0.444171 | 4_1:-51279031 | Msa0554010:CDS |
| AGGAATCAATGATGAATTCT+GGG | 0.451268 | 4_1:-51279011 | Msa0554010:CDS |
| GATAACCAATTGGTAAATGT+TGG | 0.452224 | 4_1:-51279787 | Msa0554010:CDS |
| GAAGATTCAACAAGAAAAGA+TGG | 0.457111 | 4_1:-51278885 | Msa0554010:CDS |
| CGGAAATCTACTCATGCAAA+TGG | 0.457161 | 4_1:-51279967 | Msa0554010:CDS |
| AGCAAAGGCCATGAATAGTC+CGG | 0.460979 | 4_1:-51279713 | Msa0554010:CDS |
| GGATCGCGAATTATGACAGC+TGG | 0.461443 | 4_1:-51280988 | Msa0554010:CDS |
| AAAGAGGCGGCTCCAGGGGC+AGG | 0.463211 | 4_1:-51279629 | Msa0554010:CDS |
| ATAACCAATTGGTAAATGTT+GGG | 0.467159 | 4_1:-51279786 | Msa0554010:CDS |
| AAAGTGTTACACCAGAAACT+TGG | 0.470921 | 4_1:+51279389 | None:intergenic |
| TGGTGTGCTGCTGTAAATTC+GGG | 0.478210 | 4_1:+51279229 | None:intergenic |
| TGTTGGGTCATGTGTGGAAG+TGG | 0.480175 | 4_1:-51279908 | Msa0554010:CDS |
| AGCCGCAGAACCCACCTGTT+GGG | 0.484089 | 4_1:-51279924 | Msa0554010:CDS |
| AAGAGGTTGAAAGACTGAAA+AGG | 0.488568 | 4_1:-51279867 | Msa0554010:CDS |
| AACTGTTCATTTGCAACACC+TGG | 0.490230 | 4_1:+51279506 | None:intergenic |
| GTTCAATTGTCTGACGAAGC+TGG | 0.491130 | 4_1:+51280792 | None:intergenic |
| AGAGGTTGAAAGACTGAAAA+GGG | 0.491243 | 4_1:-51279866 | Msa0554010:CDS |
| GACTATTCATGGCCTTTGCT+AGG | 0.492617 | 4_1:+51279716 | None:intergenic |
| ACAATCGACTGATAACCAAT+TGG | 0.498524 | 4_1:-51279797 | Msa0554010:CDS |
| GAAGTTAAATGTAGTTCTCT+AGG | 0.498658 | 4_1:-51278947 | Msa0554010:CDS |
| ACCCCATGAAACGATCGATT+CGG | 0.504242 | 4_1:+51280900 | None:intergenic |
| ACTTCCACACATGACCCAAC+AGG | 0.505692 | 4_1:+51279910 | None:intergenic |
| TCGTCTGTGTCTCCAGTAAG+TGG | 0.508093 | 4_1:+51278968 | None:intergenic |
| GAAAGGTTGACCCCGACCAC+TGG | 0.509890 | 4_1:-51280050 | Msa0554010:CDS |
| TTCTGGTGTAACACTTTCTG+AGG | 0.510063 | 4_1:-51279383 | Msa0554010:CDS |
| CAAAATCCAAAATATTGTCT+TGG | 0.518046 | 4_1:+51279209 | None:intergenic |
| ATACCAGCCTTCTATTAATG+AGG | 0.518457 | 4_1:-51279548 | Msa0554010:CDS |
| TTGTACCTCAGACATGCTAT+TGG | 0.521476 | 4_1:+51279297 | None:intergenic |
| CAGCCTCATTAATAGAAGGC+TGG | 0.523190 | 4_1:+51279545 | None:intergenic |
| GTTCCATCTGTTGAGTAAGA+TGG | 0.529932 | 4_1:+51278852 | None:intergenic |
| TAACATTTCCAAGAGTTTCG+TGG | 0.532952 | 4_1:-51280414 | Msa0554010:CDS |
| CAACAATCATCAGAGAGTAA+AGG | 0.538191 | 4_1:-51281009 | Msa0554010:CDS |
| CACTGGGAATTCGCTCATGA+AGG | 0.540283 | 4_1:-51280033 | Msa0554010:CDS |
| CGTCCATCAAGAGGATTATG+TGG | 0.541079 | 4_1:+51279580 | None:intergenic |
| AAGGTAAGAAAGAAAGTTTG+AGG | 0.546042 | 4_1:+51281059 | None:intergenic |
| GAAAATTGAGCCATGAAGCC+CGG | 0.546699 | 4_1:+51279694 | None:intergenic |
| GAGCGAATTCCCAGTGGTCG+GGG | 0.547097 | 4_1:+51280040 | None:intergenic |
| GATGATGAAGATGAAGAAGA+GGG | 0.551503 | 4_1:+51281036 | None:intergenic |
| CATCAATAAGCAATGCATCA+AGG | 0.554567 | 4_1:+51279455 | None:intergenic |
| GAACAGTGATGGTGAAGTGA+AGG | 0.555884 | 4_1:+51281086 | None:intergenic |
| AAGCCGCAGAACCCACCTGT+TGG | 0.557194 | 4_1:-51279925 | Msa0554010:CDS |
| TGATGATGAAGATGAAGAAG+AGG | 0.557499 | 4_1:+51281035 | None:intergenic |
| TAAGTTTGGGCTTGATGAAG+AGG | 0.559114 | 4_1:-51279884 | Msa0554010:CDS |
| AGGTAAGAAAGAAAGTTTGA+GGG | 0.564543 | 4_1:+51281060 | None:intergenic |
| GCAAAGGCCATGAATAGTCC+GGG | 0.565582 | 4_1:-51279712 | Msa0554010:CDS |
| AATGAACAGTTCTGCAAGGG+TGG | 0.569475 | 4_1:-51279494 | Msa0554010:CDS |
| ATGAGCGAATTCCCAGTGGT+CGG | 0.570309 | 4_1:+51280038 | None:intergenic |
| GATGATGTCGTTCCTAGCAA+AGG | 0.573149 | 4_1:-51279728 | Msa0554010:CDS |
| ATATGGTTTGACTAAAGACC+AGG | 0.574236 | 4_1:-51278924 | Msa0554010:CDS |
| GGACCATCTTACTCAACAGA+TGG | 0.577724 | 4_1:-51278855 | Msa0554010:CDS |
| AAGTGTTACACCAGAAACTT+GGG | 0.578836 | 4_1:+51279390 | None:intergenic |
| CTATCTAATGGAATGGCTGA+AGG | 0.583304 | 4_1:+51279427 | None:intergenic |
| AAAGGTTGACCCCGACCACT+GGG | 0.583804 | 4_1:-51280049 | Msa0554010:CDS |
| ATTTCCAAGAGTTTCGTGGA+AGG | 0.584043 | 4_1:-51280410 | Msa0554010:CDS |
| TTAACAACACGTCCATCAAG+AGG | 0.586952 | 4_1:+51279571 | None:intergenic |
| TTTGAGGGTAAGAACAGTGA+TGG | 0.590619 | 4_1:+51281075 | None:intergenic |
| ACAGATGGAACTTCTTGCAT+CGG | 0.591151 | 4_1:-51278840 | Msa0554010:CDS |
| TCCACACATGACCCAACAGG+TGG | 0.591825 | 4_1:+51279913 | None:intergenic |
| AGGATTATGTGGATTCTTGG+TGG | 0.592009 | 4_1:+51279591 | None:intergenic |
| GACCCAACAGGTGGGTTCTG+CGG | 0.593008 | 4_1:+51279922 | None:intergenic |
| AGTAATAGACATGTTACCGC+TGG | 0.593286 | 4_1:-51279655 | Msa0554010:CDS |
| CGTCTGTGTCTCCAGTAAGT+GGG | 0.594211 | 4_1:+51278969 | None:intergenic |
| TGTAAATTCGGGAAATTCAG+CGG | 0.601730 | 4_1:+51279240 | None:intergenic |
| ATGAAGATGAAGAAGAGGGA+AGG | 0.601829 | 4_1:+51281040 | None:intergenic |
| ACACAGTCAGTCAACACAGC+AGG | 0.605291 | 4_1:+51279268 | None:intergenic |
| TGCATCAAGGTTCTTGATGG+AGG | 0.607948 | 4_1:+51279468 | None:intergenic |
| AGAGTCATCAACCATATCGT+AGG | 0.608336 | 4_1:+51280927 | None:intergenic |
| ACAAGAAAAGATGGAGCACA+TGG | 0.615775 | 4_1:-51278876 | Msa0554010:CDS |
| TGGGCAACGTGTGCAAGTGA+TGG | 0.618938 | 4_1:-51279767 | Msa0554010:CDS |
| ACTACTGCTATCTAATGGAA+TGG | 0.639316 | 4_1:+51279420 | None:intergenic |
| CCCACCTGTTGGGTCATGTG+TGG | 0.640259 | 4_1:-51279914 | Msa0554010:CDS |
| GATCGCGAATTATGACAGCT+GGG | 0.642062 | 4_1:-51280987 | Msa0554010:CDS |
| TGCAAATGAACAGTTCTGCA+AGG | 0.642798 | 4_1:-51279498 | Msa0554010:CDS |
| TGTTAAAGAATATCAATAGG+CGG | 0.647648 | 4_1:-51279987 | Msa0554010:CDS |
| TATGACCAATAGCATGTCTG+AGG | 0.654015 | 4_1:-51279302 | Msa0554010:CDS |
| CATGACTGCCCAGAAATAGG+TGG | 0.654540 | 4_1:+51279358 | None:intergenic |
| GTTGGGTCATGTGTGGAAGT+GGG | 0.670827 | 4_1:-51279907 | Msa0554010:CDS |
| ACCGAATCGATCGTTTCATG+GGG | 0.677166 | 4_1:-51280901 | Msa0554010:CDS |
| GCAAATGAACAGTTCTGCAA+GGG | 0.681864 | 4_1:-51279497 | Msa0554010:CDS |
| CCACACATGACCCAACAGGT+GGG | 0.694523 | 4_1:+51279914 | None:intergenic |
| TGTTACACCAGAAACTTGGG+TGG | 0.706092 | 4_1:+51279393 | None:intergenic |
| GGTAAAGTAAGAACATACGT+AGG | 0.708772 | 4_1:+51280768 | None:intergenic |
| TGTTAGAACTGAATTCTACA+CGG | 0.709397 | 4_1:-51280351 | Msa0554010:intron |
| GGTGGAATTGAAAACGACGA+AGG | 0.715764 | 4_1:+51280864 | None:intergenic |
| GATGTGTTTGGAGAAATCGG+TGG | 0.725221 | 4_1:+51280846 | None:intergenic |
| CTTCATGAGCGAATTCCCAG+TGG | 0.735453 | 4_1:+51280034 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCAGATTTTCTTAATTA+GGG | - | chr4_1:51279180-51279199 | Msa0554010:CDS | 15.0% |
| !! | AATTCTTAGAAAATATTCAT+CGG | + | chr4_1:51279482-51279501 | None:intergenic | 15.0% |
| !! | ATAATATTAAAAAAGCAAGA+AGG | + | chr4_1:51279745-51279764 | None:intergenic | 15.0% |
| !! | TATTATACATTTAATAATGC+TGG | - | chr4_1:51279759-51279778 | Msa0554010:CDS | 15.0% |
| !!! | ATTTGTTAAAGAATATCAAT+AGG | - | chr4_1:51279935-51279954 | Msa0554010:CDS | 15.0% |
| !!! | TTTTCAGATTTTCTTAATTA+GGG | - | chr4_1:51279180-51279199 | Msa0554010:CDS | 15.0% |
| !! | AATTCTTAGAAAATATTCAT+CGG | + | chr4_1:51279482-51279501 | None:intergenic | 15.0% |
| !! | ATAATATTAAAAAAGCAAGA+AGG | + | chr4_1:51279745-51279764 | None:intergenic | 15.0% |
| !! | TATTATACATTTAATAATGC+TGG | - | chr4_1:51279759-51279778 | Msa0554010:CDS | 15.0% |
| !!! | ATTTGTTAAAGAATATCAAT+AGG | - | chr4_1:51279935-51279954 | Msa0554010:CDS | 15.0% |
| !!! | TTGTTGTGTTTGAAATATTT+AGG | + | chr4_1:51279108-51279127 | None:intergenic | 20.0% |
| !! | CTAATTAAGAAAATCTGAAA+AGG | + | chr4_1:51279181-51279200 | None:intergenic | 20.0% |
| !!! | CTTTTCAGATTTTCTTAATT+AGG | - | chr4_1:51279179-51279198 | Msa0554010:CDS | 20.0% |
| !!! | GATGAATATTTTCTAAGAAT+TGG | - | chr4_1:51279481-51279500 | Msa0554010:CDS | 20.0% |
| !!! | TTAAGTAGTAATAGGATTTT+AGG | - | chr4_1:51279618-51279637 | Msa0554010:CDS | 20.0% |
| !!! | TTGTTGTGTTTGAAATATTT+AGG | + | chr4_1:51279108-51279127 | None:intergenic | 20.0% |
| !! | CTAATTAAGAAAATCTGAAA+AGG | + | chr4_1:51279181-51279200 | None:intergenic | 20.0% |
| !!! | CTTTTCAGATTTTCTTAATT+AGG | - | chr4_1:51279179-51279198 | Msa0554010:CDS | 20.0% |
| !!! | GATGAATATTTTCTAAGAAT+TGG | - | chr4_1:51279481-51279500 | Msa0554010:CDS | 20.0% |
| !!! | TTAAGTAGTAATAGGATTTT+AGG | - | chr4_1:51279618-51279637 | Msa0554010:CDS | 20.0% |
| ! | GTTCAGATCATATTAACTTA+TGG | - | chr4_1:51279222-51279241 | Msa0554010:CDS | 25.0% |
| !! | TTATGGACGAAGATTTTATT+AGG | - | chr4_1:51279239-51279258 | Msa0554010:CDS | 25.0% |
| !! | CTTAATTGTAATTTGGTGAT+TGG | - | chr4_1:51279327-51279346 | Msa0554010:CDS | 25.0% |
| ! | GTAATTAGAGAAGTTACATT+CGG | - | chr4_1:51279366-51279385 | Msa0554010:CDS | 25.0% |
| ! | TAATTAGAGAAGTTACATTC+GGG | - | chr4_1:51279367-51279386 | Msa0554010:CDS | 25.0% |
| !!! | ATTTTCTAAGAATTGGATGT+AGG | - | chr4_1:51279488-51279507 | Msa0554010:CDS | 25.0% |
| !!! | AGTAATAGGATTTTAGGTTA+TGG | - | chr4_1:51279624-51279643 | Msa0554010:CDS | 25.0% |
| !!! | TTTTAGGTTATGGTTAAGAT+AGG | - | chr4_1:51279634-51279653 | Msa0554010:CDS | 25.0% |
| !! | ATGTATACTTTTAATCATGC+TGG | - | chr4_1:51279801-51279820 | Msa0554010:CDS | 25.0% |
| !!! | TATCTTTTTTATTCACAAGC+AGG | - | chr4_1:51279846-51279865 | Msa0554010:CDS | 25.0% |
| !!! | ATCTTTTTTATTCACAAGCA+GGG | - | chr4_1:51279847-51279866 | Msa0554010:CDS | 25.0% |
| ! | TGTTAAAGAATATCAATAGG+CGG | - | chr4_1:51279938-51279957 | Msa0554010:CDS | 25.0% |
| ! | ATAACCAATTGGTAAATGTT+GGG | - | chr4_1:51280139-51280158 | Msa0554010:intron | 25.0% |
| ! | TGCAAAAACATTATTTAACC+AGG | - | chr4_1:51280401-51280420 | Msa0554010:CDS | 25.0% |
| ! | CAAAATCCAAAATATTGTCT+TGG | + | chr4_1:51280719-51280738 | None:intergenic | 25.0% |
| !!! | CAAGACAATATTTTGGATTT+TGG | - | chr4_1:51280717-51280736 | Msa0554010:intron | 25.0% |
| !! | AATCCTGATCAAAATTTTGT+GGG | - | chr4_1:51280777-51280796 | Msa0554010:intron | 25.0% |
| !!! | AATTCTGGGAACAATTTTTT+AGG | - | chr4_1:51280928-51280947 | Msa0554010:CDS | 25.0% |
| ! | GTTCAGATCATATTAACTTA+TGG | - | chr4_1:51279222-51279241 | Msa0554010:CDS | 25.0% |
| !! | TTATGGACGAAGATTTTATT+AGG | - | chr4_1:51279239-51279258 | Msa0554010:CDS | 25.0% |
| !! | CTTAATTGTAATTTGGTGAT+TGG | - | chr4_1:51279327-51279346 | Msa0554010:CDS | 25.0% |
| ! | GTAATTAGAGAAGTTACATT+CGG | - | chr4_1:51279366-51279385 | Msa0554010:CDS | 25.0% |
| ! | TAATTAGAGAAGTTACATTC+GGG | - | chr4_1:51279367-51279386 | Msa0554010:CDS | 25.0% |
| !!! | ATTTTCTAAGAATTGGATGT+AGG | - | chr4_1:51279488-51279507 | Msa0554010:CDS | 25.0% |
| !!! | AGTAATAGGATTTTAGGTTA+TGG | - | chr4_1:51279624-51279643 | Msa0554010:CDS | 25.0% |
| !!! | TTTTAGGTTATGGTTAAGAT+AGG | - | chr4_1:51279634-51279653 | Msa0554010:CDS | 25.0% |
| !! | ATGTATACTTTTAATCATGC+TGG | - | chr4_1:51279801-51279820 | Msa0554010:CDS | 25.0% |
| !!! | TATCTTTTTTATTCACAAGC+AGG | - | chr4_1:51279846-51279865 | Msa0554010:CDS | 25.0% |
| !!! | ATCTTTTTTATTCACAAGCA+GGG | - | chr4_1:51279847-51279866 | Msa0554010:CDS | 25.0% |
| ! | TGTTAAAGAATATCAATAGG+CGG | - | chr4_1:51279938-51279957 | Msa0554010:CDS | 25.0% |
| ! | ATAACCAATTGGTAAATGTT+GGG | - | chr4_1:51280139-51280158 | Msa0554010:intron | 25.0% |
| ! | TGCAAAAACATTATTTAACC+AGG | - | chr4_1:51280401-51280420 | Msa0554010:CDS | 25.0% |
| ! | CAAAATCCAAAATATTGTCT+TGG | + | chr4_1:51280719-51280738 | None:intergenic | 25.0% |
| !!! | CAAGACAATATTTTGGATTT+TGG | - | chr4_1:51280717-51280736 | Msa0554010:intron | 25.0% |
| !! | AATCCTGATCAAAATTTTGT+GGG | - | chr4_1:51280777-51280796 | Msa0554010:intron | 25.0% |
| !!! | AATTCTGGGAACAATTTTTT+AGG | - | chr4_1:51280928-51280947 | Msa0554010:CDS | 25.0% |
| AGGTAAGAAAGAAAGTTTGA+GGG | + | chr4_1:51278868-51278887 | None:intergenic | 30.0% | |
| AAGGTAAGAAAGAAAGTTTG+AGG | + | chr4_1:51278869-51278888 | None:intergenic | 30.0% | |
| ATATTTAGGCAAGATGTGTT+TGG | + | chr4_1:51279094-51279113 | None:intergenic | 30.0% | |
| TGTTAGAACTGAATTCTACA+CGG | - | chr4_1:51279574-51279593 | Msa0554010:CDS | 30.0% | |
| GACTGCAATTAAGTAGTAAT+AGG | - | chr4_1:51279610-51279629 | Msa0554010:CDS | 30.0% | |
| GTTAAGATAGGTATCCTATT+GGG | - | chr4_1:51279646-51279665 | Msa0554010:CDS | 30.0% | |
| TTAAGATAGGTATCCTATTG+GGG | - | chr4_1:51279647-51279666 | Msa0554010:CDS | 30.0% | |
| ATTAAAAAAGCAAGAAGGAG+AGG | + | chr4_1:51279740-51279759 | None:intergenic | 30.0% | |
| GATAACCAATTGGTAAATGT+TGG | - | chr4_1:51280138-51280157 | Msa0554010:intron | 30.0% | |
| ! | GAATCCTGATCAAAATTTTG+TGG | - | chr4_1:51280776-51280795 | Msa0554010:intron | 30.0% |
| ! | ATCCTGATCAAAATTTTGTG+GGG | - | chr4_1:51280778-51280797 | Msa0554010:intron | 30.0% |
| AGGAATCAATGATGAATTCT+GGG | - | chr4_1:51280914-51280933 | Msa0554010:CDS | 30.0% | |
| GAAGTTAAATGTAGTTCTCT+AGG | - | chr4_1:51280978-51280997 | Msa0554010:CDS | 30.0% | |
| !! | AAATGTAGTTCTCTAGGATA+TGG | - | chr4_1:51280984-51281003 | Msa0554010:CDS | 30.0% |
| TGTTGAATCTTCTTTGCTAA+TGG | + | chr4_1:51281032-51281051 | None:intergenic | 30.0% | |
| GAAGATTCAACAAGAAAAGA+TGG | - | chr4_1:51281040-51281059 | Msa0554010:CDS | 30.0% | |
| AGGTAAGAAAGAAAGTTTGA+GGG | + | chr4_1:51278868-51278887 | None:intergenic | 30.0% | |
| AAGGTAAGAAAGAAAGTTTG+AGG | + | chr4_1:51278869-51278888 | None:intergenic | 30.0% | |
| ATATTTAGGCAAGATGTGTT+TGG | + | chr4_1:51279094-51279113 | None:intergenic | 30.0% | |
| TGTTAGAACTGAATTCTACA+CGG | - | chr4_1:51279574-51279593 | Msa0554010:CDS | 30.0% | |
| GACTGCAATTAAGTAGTAAT+AGG | - | chr4_1:51279610-51279629 | Msa0554010:CDS | 30.0% | |
| GTTAAGATAGGTATCCTATT+GGG | - | chr4_1:51279646-51279665 | Msa0554010:CDS | 30.0% | |
| TTAAGATAGGTATCCTATTG+GGG | - | chr4_1:51279647-51279666 | Msa0554010:CDS | 30.0% | |
| ATTAAAAAAGCAAGAAGGAG+AGG | + | chr4_1:51279740-51279759 | None:intergenic | 30.0% | |
| GATAACCAATTGGTAAATGT+TGG | - | chr4_1:51280138-51280157 | Msa0554010:intron | 30.0% | |
| ! | GAATCCTGATCAAAATTTTG+TGG | - | chr4_1:51280776-51280795 | Msa0554010:intron | 30.0% |
| ! | ATCCTGATCAAAATTTTGTG+GGG | - | chr4_1:51280778-51280797 | Msa0554010:intron | 30.0% |
| AGGAATCAATGATGAATTCT+GGG | - | chr4_1:51280914-51280933 | Msa0554010:CDS | 30.0% | |
| GAAGTTAAATGTAGTTCTCT+AGG | - | chr4_1:51280978-51280997 | Msa0554010:CDS | 30.0% | |
| !! | AAATGTAGTTCTCTAGGATA+TGG | - | chr4_1:51280984-51281003 | Msa0554010:CDS | 30.0% |
| TGTTGAATCTTCTTTGCTAA+TGG | + | chr4_1:51281032-51281051 | None:intergenic | 30.0% | |
| GAAGATTCAACAAGAAAAGA+TGG | - | chr4_1:51281040-51281059 | Msa0554010:CDS | 30.0% | |
| GATGATGAAGATGAAGAAGA+GGG | + | chr4_1:51278892-51278911 | None:intergenic | 35.0% | |
| ! | TGATGATGAAGATGAAGAAG+AGG | + | chr4_1:51278893-51278912 | None:intergenic | 35.0% |
| CAACAATCATCAGAGAGTAA+AGG | - | chr4_1:51278916-51278935 | Msa0554010:CDS | 35.0% | |
| CAAGATGTGTTTGGAGAAAT+CGG | + | chr4_1:51279085-51279104 | None:intergenic | 35.0% | |
| GGTAAAGTAAGAACATACGT+AGG | + | chr4_1:51279160-51279179 | None:intergenic | 35.0% | |
| GAACGCGCTTAATTGTAATT+TGG | - | chr4_1:51279320-51279339 | Msa0554010:CDS | 35.0% | |
| ! | TTGTAATTTGGTGATTGGAG+AGG | - | chr4_1:51279332-51279351 | Msa0554010:CDS | 35.0% |
| ! | TGTAATTTGGTGATTGGAGA+GGG | - | chr4_1:51279333-51279352 | Msa0554010:CDS | 35.0% |
| ACATTAACAGTAACACTAGC+AGG | + | chr4_1:51279432-51279451 | None:intergenic | 35.0% | |
| ! | TGCTAGTGTTACTGTTAATG+TGG | - | chr4_1:51279431-51279450 | Msa0554010:CDS | 35.0% |
| TAACATTTCCAAGAGTTTCG+TGG | - | chr4_1:51279511-51279530 | Msa0554010:CDS | 35.0% | |
| CATTTGCAAACTGCAAAAAG+TGG | + | chr4_1:51279556-51279575 | None:intergenic | 35.0% | |
| GGTTAAGATAGGTATCCTAT+TGG | - | chr4_1:51279645-51279664 | Msa0554010:CDS | 35.0% | |
| CTAACTAATGAATCCCCAAT+AGG | + | chr4_1:51279663-51279682 | None:intergenic | 35.0% | |
| ! | TCGCTCATGAAGGATTTTTA+AGG | - | chr4_1:51279902-51279921 | Msa0554010:CDS | 35.0% |
| ! | CGCTCATGAAGGATTTTTAA+GGG | - | chr4_1:51279903-51279922 | Msa0554010:CDS | 35.0% |
| !! | GCTCATGAAGGATTTTTAAG+GGG | - | chr4_1:51279904-51279923 | Msa0554010:CDS | 35.0% |
| AAGAGGTTGAAAGACTGAAA+AGG | - | chr4_1:51280058-51280077 | Msa0554010:CDS | 35.0% | |
| AGAGGTTGAAAGACTGAAAA+GGG | - | chr4_1:51280059-51280078 | Msa0554010:CDS | 35.0% | |
| ACAATCGACTGATAACCAAT+TGG | - | chr4_1:51280128-51280147 | Msa0554010:intron | 35.0% | |
| AAGAGGATTATGTGGATTCT+TGG | + | chr4_1:51280340-51280359 | None:intergenic | 35.0% | |
| AATCCACATAATCCTCTTGA+TGG | - | chr4_1:51280342-51280361 | Msa0554010:intron | 35.0% | |
| ATACCAGCCTTCTATTAATG+AGG | - | chr4_1:51280377-51280396 | Msa0554010:CDS | 35.0% | |
| TTTGCAGCCTCATTAATAGA+AGG | + | chr4_1:51280387-51280406 | None:intergenic | 35.0% | |
| CATCAATAAGCAATGCATCA+AGG | + | chr4_1:51280473-51280492 | None:intergenic | 35.0% | |
| ACTACTGCTATCTAATGGAA+TGG | + | chr4_1:51280508-51280527 | None:intergenic | 35.0% | |
| GATGAACTACTGCTATCTAA+TGG | + | chr4_1:51280513-51280532 | None:intergenic | 35.0% | |
| AAGTGTTACACCAGAAACTT+GGG | + | chr4_1:51280538-51280557 | None:intergenic | 35.0% | |
| ! | AAAGTGTTACACCAGAAACT+TGG | + | chr4_1:51280539-51280558 | None:intergenic | 35.0% |
| CTATTGGTCATACAACTTAC+AGG | + | chr4_1:51280615-51280634 | None:intergenic | 35.0% | |
| TGTAAATTCGGGAAATTCAG+CGG | + | chr4_1:51280688-51280707 | None:intergenic | 35.0% | |
| ! | AGCACACCAAGACAATATTT+TGG | - | chr4_1:51280710-51280729 | Msa0554010:intron | 35.0% |
| !! | TTGGATTTTGGTGAAGTTCA+AGG | - | chr4_1:51280729-51280748 | Msa0554010:intron | 35.0% |
| !! | TGATATCAGCTGTTTTGGAT+GGG | - | chr4_1:51280832-51280851 | Msa0554010:CDS | 35.0% |
| AATGAAAATTCCAAGCTTCC+AGG | - | chr4_1:51280894-51280913 | Msa0554010:CDS | 35.0% | |
| !! | CAGAATTCATCATTGATTCC+TGG | + | chr4_1:51280915-51280934 | None:intergenic | 35.0% |
| CAGGAATCAATGATGAATTC+TGG | - | chr4_1:51280913-51280932 | Msa0554010:CDS | 35.0% | |
| ATATGGTTTGACTAAAGACC+AGG | - | chr4_1:51281001-51281020 | Msa0554010:CDS | 35.0% | |
| GATGATGAAGATGAAGAAGA+GGG | + | chr4_1:51278892-51278911 | None:intergenic | 35.0% | |
| ! | TGATGATGAAGATGAAGAAG+AGG | + | chr4_1:51278893-51278912 | None:intergenic | 35.0% |
| CAACAATCATCAGAGAGTAA+AGG | - | chr4_1:51278916-51278935 | Msa0554010:CDS | 35.0% | |
| CAAGATGTGTTTGGAGAAAT+CGG | + | chr4_1:51279085-51279104 | None:intergenic | 35.0% | |
| GGTAAAGTAAGAACATACGT+AGG | + | chr4_1:51279160-51279179 | None:intergenic | 35.0% | |
| GAACGCGCTTAATTGTAATT+TGG | - | chr4_1:51279320-51279339 | Msa0554010:CDS | 35.0% | |
| ! | TTGTAATTTGGTGATTGGAG+AGG | - | chr4_1:51279332-51279351 | Msa0554010:CDS | 35.0% |
| ! | TGTAATTTGGTGATTGGAGA+GGG | - | chr4_1:51279333-51279352 | Msa0554010:CDS | 35.0% |
| ACATTAACAGTAACACTAGC+AGG | + | chr4_1:51279432-51279451 | None:intergenic | 35.0% | |
| ! | TGCTAGTGTTACTGTTAATG+TGG | - | chr4_1:51279431-51279450 | Msa0554010:CDS | 35.0% |
| TAACATTTCCAAGAGTTTCG+TGG | - | chr4_1:51279511-51279530 | Msa0554010:CDS | 35.0% | |
| CATTTGCAAACTGCAAAAAG+TGG | + | chr4_1:51279556-51279575 | None:intergenic | 35.0% | |
| GGTTAAGATAGGTATCCTAT+TGG | - | chr4_1:51279645-51279664 | Msa0554010:CDS | 35.0% | |
| CTAACTAATGAATCCCCAAT+AGG | + | chr4_1:51279663-51279682 | None:intergenic | 35.0% | |
| ! | TCGCTCATGAAGGATTTTTA+AGG | - | chr4_1:51279902-51279921 | Msa0554010:CDS | 35.0% |
| ! | CGCTCATGAAGGATTTTTAA+GGG | - | chr4_1:51279903-51279922 | Msa0554010:CDS | 35.0% |
| !! | GCTCATGAAGGATTTTTAAG+GGG | - | chr4_1:51279904-51279923 | Msa0554010:CDS | 35.0% |
| AAGAGGTTGAAAGACTGAAA+AGG | - | chr4_1:51280058-51280077 | Msa0554010:CDS | 35.0% | |
| AGAGGTTGAAAGACTGAAAA+GGG | - | chr4_1:51280059-51280078 | Msa0554010:CDS | 35.0% | |
| ACAATCGACTGATAACCAAT+TGG | - | chr4_1:51280128-51280147 | Msa0554010:intron | 35.0% | |
| AAGAGGATTATGTGGATTCT+TGG | + | chr4_1:51280340-51280359 | None:intergenic | 35.0% | |
| AATCCACATAATCCTCTTGA+TGG | - | chr4_1:51280342-51280361 | Msa0554010:intron | 35.0% | |
| ATACCAGCCTTCTATTAATG+AGG | - | chr4_1:51280377-51280396 | Msa0554010:CDS | 35.0% | |
| TTTGCAGCCTCATTAATAGA+AGG | + | chr4_1:51280387-51280406 | None:intergenic | 35.0% | |
| CATCAATAAGCAATGCATCA+AGG | + | chr4_1:51280473-51280492 | None:intergenic | 35.0% | |
| ACTACTGCTATCTAATGGAA+TGG | + | chr4_1:51280508-51280527 | None:intergenic | 35.0% | |
| GATGAACTACTGCTATCTAA+TGG | + | chr4_1:51280513-51280532 | None:intergenic | 35.0% | |
| AAGTGTTACACCAGAAACTT+GGG | + | chr4_1:51280538-51280557 | None:intergenic | 35.0% | |
| ! | AAAGTGTTACACCAGAAACT+TGG | + | chr4_1:51280539-51280558 | None:intergenic | 35.0% |
| CTATTGGTCATACAACTTAC+AGG | + | chr4_1:51280615-51280634 | None:intergenic | 35.0% | |
| TGTAAATTCGGGAAATTCAG+CGG | + | chr4_1:51280688-51280707 | None:intergenic | 35.0% | |
| ! | AGCACACCAAGACAATATTT+TGG | - | chr4_1:51280710-51280729 | Msa0554010:intron | 35.0% |
| !! | TTGGATTTTGGTGAAGTTCA+AGG | - | chr4_1:51280729-51280748 | Msa0554010:intron | 35.0% |
| !! | TGATATCAGCTGTTTTGGAT+GGG | - | chr4_1:51280832-51280851 | Msa0554010:CDS | 35.0% |
| AATGAAAATTCCAAGCTTCC+AGG | - | chr4_1:51280894-51280913 | Msa0554010:CDS | 35.0% | |
| !! | CAGAATTCATCATTGATTCC+TGG | + | chr4_1:51280915-51280934 | None:intergenic | 35.0% |
| CAGGAATCAATGATGAATTC+TGG | - | chr4_1:51280913-51280932 | Msa0554010:CDS | 35.0% | |
| ATATGGTTTGACTAAAGACC+AGG | - | chr4_1:51281001-51281020 | Msa0554010:CDS | 35.0% | |
| TTTGAGGGTAAGAACAGTGA+TGG | + | chr4_1:51278853-51278872 | None:intergenic | 40.0% | |
| ATGAAGATGAAGAAGAGGGA+AGG | + | chr4_1:51278888-51278907 | None:intergenic | 40.0% | |
| ! | TCGTAGGTTTTGCTTAGGAA+CGG | + | chr4_1:51278985-51279004 | None:intergenic | 40.0% |
| ! | CCATATCGTAGGTTTTGCTT+AGG | + | chr4_1:51278990-51279009 | None:intergenic | 40.0% |
| CCTAAGCAAAACCTACGATA+TGG | - | chr4_1:51278987-51279006 | Msa0554010:CDS | 40.0% | |
| AGAGTCATCAACCATATCGT+AGG | + | chr4_1:51279001-51279020 | None:intergenic | 40.0% | |
| AACCGAATCGATCGTTTCAT+GGG | - | chr4_1:51279023-51279042 | Msa0554010:CDS | 40.0% | |
| GTTACATTCGGGATGCATTT+CGG | - | chr4_1:51279378-51279397 | Msa0554010:CDS | 40.0% | |
| ATTTCCAAGAGTTTCGTGGA+AGG | - | chr4_1:51279515-51279534 | Msa0554010:CDS | 40.0% | |
| CAAAGTCAAGATACTTGTCC+TGG | - | chr4_1:51279695-51279714 | Msa0554010:CDS | 40.0% | |
| !!! | TCACAAGCAGGGTTTTAGAA+AGG | - | chr4_1:51279858-51279877 | Msa0554010:CDS | 40.0% |
| CGGAAATCTACTCATGCAAA+TGG | - | chr4_1:51279958-51279977 | Msa0554010:CDS | 40.0% | |
| TAAGTTTGGGCTTGATGAAG+AGG | - | chr4_1:51280041-51280060 | Msa0554010:CDS | 40.0% | |
| GTTGCCCAACATTTACCAAT+TGG | + | chr4_1:51280146-51280165 | None:intergenic | 40.0% | |
| AGTAATAGACATGTTACCGC+TGG | - | chr4_1:51280270-51280289 | Msa0554010:intron | 40.0% | |
| ATGTTACCGCTGGTAAAAAG+AGG | - | chr4_1:51280280-51280299 | Msa0554010:intron | 40.0% | |
| AGGATTATGTGGATTCTTGG+TGG | + | chr4_1:51280337-51280356 | None:intergenic | 40.0% | |
| TTAACAACACGTCCATCAAG+AGG | + | chr4_1:51280357-51280376 | None:intergenic | 40.0% | |
| AACTGTTCATTTGCAACACC+TGG | + | chr4_1:51280422-51280441 | None:intergenic | 40.0% | |
| TGCAAATGAACAGTTCTGCA+AGG | - | chr4_1:51280427-51280446 | Msa0554010:intron | 40.0% | |
| GCAAATGAACAGTTCTGCAA+GGG | - | chr4_1:51280428-51280447 | Msa0554010:intron | 40.0% | |
| CAATGCATCAAGGTTCTTGA+TGG | + | chr4_1:51280463-51280482 | None:intergenic | 40.0% | |
| CTATCTAATGGAATGGCTGA+AGG | + | chr4_1:51280501-51280520 | None:intergenic | 40.0% | |
| TTCTGGTGTAACACTTTCTG+AGG | - | chr4_1:51280542-51280561 | Msa0554010:intron | 40.0% | |
| ATACATGACTGCCCAGAAAT+AGG | + | chr4_1:51280573-51280592 | None:intergenic | 40.0% | |
| TATGACCAATAGCATGTCTG+AGG | - | chr4_1:51280623-51280642 | Msa0554010:intron | 40.0% | |
| TTGTACCTCAGACATGCTAT+TGG | + | chr4_1:51280631-51280650 | None:intergenic | 40.0% | |
| ! | TTGGTGTGCTGCTGTAAATT+CGG | + | chr4_1:51280700-51280719 | None:intergenic | 40.0% |
| ! | TTTTGGTGAAGTTCAAGGAC+TGG | - | chr4_1:51280734-51280753 | Msa0554010:intron | 40.0% |
| !! | GACCCCACAAAATTTTGATC+AGG | + | chr4_1:51280783-51280802 | None:intergenic | 40.0% |
| ! | CAAAATTTTGTGGGGTCTGT+CGG | - | chr4_1:51280786-51280805 | Msa0554010:CDS | 40.0% |
| ! | CGGTGAGAATGATGATGAAT+TGG | - | chr4_1:51280806-51280825 | Msa0554010:CDS | 40.0% |
| ! | GGATGTGATATCAGCTGTTT+TGG | - | chr4_1:51280827-51280846 | Msa0554010:CDS | 40.0% |
| !! | GTGATATCAGCTGTTTTGGA+TGG | - | chr4_1:51280831-51280850 | Msa0554010:CDS | 40.0% |
| !! | ATCATTGATTCCTGGAAGCT+TGG | + | chr4_1:51280907-51280926 | None:intergenic | 40.0% |
| TCTTTGCTAATGGCAATTCC+TGG | + | chr4_1:51281022-51281041 | None:intergenic | 40.0% | |
| ACAAGAAAAGATGGAGCACA+TGG | - | chr4_1:51281049-51281068 | Msa0554010:CDS | 40.0% | |
| GTTCCATCTGTTGAGTAAGA+TGG | + | chr4_1:51281076-51281095 | None:intergenic | 40.0% | |
| ACAGATGGAACTTCTTGCAT+CGG | - | chr4_1:51281085-51281104 | Msa0554010:CDS | 40.0% | |
| TTTGAGGGTAAGAACAGTGA+TGG | + | chr4_1:51278853-51278872 | None:intergenic | 40.0% | |
| ATGAAGATGAAGAAGAGGGA+AGG | + | chr4_1:51278888-51278907 | None:intergenic | 40.0% | |
| ! | TCGTAGGTTTTGCTTAGGAA+CGG | + | chr4_1:51278985-51279004 | None:intergenic | 40.0% |
| ! | CCATATCGTAGGTTTTGCTT+AGG | + | chr4_1:51278990-51279009 | None:intergenic | 40.0% |
| CCTAAGCAAAACCTACGATA+TGG | - | chr4_1:51278987-51279006 | Msa0554010:CDS | 40.0% | |
| AGAGTCATCAACCATATCGT+AGG | + | chr4_1:51279001-51279020 | None:intergenic | 40.0% | |
| AACCGAATCGATCGTTTCAT+GGG | - | chr4_1:51279023-51279042 | Msa0554010:CDS | 40.0% | |
| GTTACATTCGGGATGCATTT+CGG | - | chr4_1:51279378-51279397 | Msa0554010:CDS | 40.0% | |
| ATTTCCAAGAGTTTCGTGGA+AGG | - | chr4_1:51279515-51279534 | Msa0554010:CDS | 40.0% | |
| CAAAGTCAAGATACTTGTCC+TGG | - | chr4_1:51279695-51279714 | Msa0554010:CDS | 40.0% | |
| !!! | TCACAAGCAGGGTTTTAGAA+AGG | - | chr4_1:51279858-51279877 | Msa0554010:CDS | 40.0% |
| CGGAAATCTACTCATGCAAA+TGG | - | chr4_1:51279958-51279977 | Msa0554010:CDS | 40.0% | |
| TAAGTTTGGGCTTGATGAAG+AGG | - | chr4_1:51280041-51280060 | Msa0554010:CDS | 40.0% | |
| GTTGCCCAACATTTACCAAT+TGG | + | chr4_1:51280146-51280165 | None:intergenic | 40.0% | |
| AGTAATAGACATGTTACCGC+TGG | - | chr4_1:51280270-51280289 | Msa0554010:intron | 40.0% | |
| ATGTTACCGCTGGTAAAAAG+AGG | - | chr4_1:51280280-51280299 | Msa0554010:intron | 40.0% | |
| AGGATTATGTGGATTCTTGG+TGG | + | chr4_1:51280337-51280356 | None:intergenic | 40.0% | |
| TTAACAACACGTCCATCAAG+AGG | + | chr4_1:51280357-51280376 | None:intergenic | 40.0% | |
| AACTGTTCATTTGCAACACC+TGG | + | chr4_1:51280422-51280441 | None:intergenic | 40.0% | |
| TGCAAATGAACAGTTCTGCA+AGG | - | chr4_1:51280427-51280446 | Msa0554010:intron | 40.0% | |
| GCAAATGAACAGTTCTGCAA+GGG | - | chr4_1:51280428-51280447 | Msa0554010:intron | 40.0% | |
| CAATGCATCAAGGTTCTTGA+TGG | + | chr4_1:51280463-51280482 | None:intergenic | 40.0% | |
| CTATCTAATGGAATGGCTGA+AGG | + | chr4_1:51280501-51280520 | None:intergenic | 40.0% | |
| TTCTGGTGTAACACTTTCTG+AGG | - | chr4_1:51280542-51280561 | Msa0554010:intron | 40.0% | |
| ATACATGACTGCCCAGAAAT+AGG | + | chr4_1:51280573-51280592 | None:intergenic | 40.0% | |
| TATGACCAATAGCATGTCTG+AGG | - | chr4_1:51280623-51280642 | Msa0554010:intron | 40.0% | |
| TTGTACCTCAGACATGCTAT+TGG | + | chr4_1:51280631-51280650 | None:intergenic | 40.0% | |
| ! | TTGGTGTGCTGCTGTAAATT+CGG | + | chr4_1:51280700-51280719 | None:intergenic | 40.0% |
| ! | TTTTGGTGAAGTTCAAGGAC+TGG | - | chr4_1:51280734-51280753 | Msa0554010:intron | 40.0% |
| !! | GACCCCACAAAATTTTGATC+AGG | + | chr4_1:51280783-51280802 | None:intergenic | 40.0% |
| ! | CAAAATTTTGTGGGGTCTGT+CGG | - | chr4_1:51280786-51280805 | Msa0554010:CDS | 40.0% |
| ! | CGGTGAGAATGATGATGAAT+TGG | - | chr4_1:51280806-51280825 | Msa0554010:CDS | 40.0% |
| ! | GGATGTGATATCAGCTGTTT+TGG | - | chr4_1:51280827-51280846 | Msa0554010:CDS | 40.0% |
| !! | GTGATATCAGCTGTTTTGGA+TGG | - | chr4_1:51280831-51280850 | Msa0554010:CDS | 40.0% |
| !! | ATCATTGATTCCTGGAAGCT+TGG | + | chr4_1:51280907-51280926 | None:intergenic | 40.0% |
| TCTTTGCTAATGGCAATTCC+TGG | + | chr4_1:51281022-51281041 | None:intergenic | 40.0% | |
| ACAAGAAAAGATGGAGCACA+TGG | - | chr4_1:51281049-51281068 | Msa0554010:CDS | 40.0% | |
| GTTCCATCTGTTGAGTAAGA+TGG | + | chr4_1:51281076-51281095 | None:intergenic | 40.0% | |
| ACAGATGGAACTTCTTGCAT+CGG | - | chr4_1:51281085-51281104 | Msa0554010:CDS | 40.0% | |
| ! | GAACAGTGATGGTGAAGTGA+AGG | + | chr4_1:51278842-51278861 | None:intergenic | 45.0% |
| GATCGCGAATTATGACAGCT+GGG | - | chr4_1:51278938-51278957 | Msa0554010:CDS | 45.0% | |
| ! | TAGGTTTTGCTTAGGAACGG+TGG | + | chr4_1:51278982-51279001 | None:intergenic | 45.0% |
| CAACCGAATCGATCGTTTCA+TGG | - | chr4_1:51279022-51279041 | Msa0554010:CDS | 45.0% | |
| ACCGAATCGATCGTTTCATG+GGG | - | chr4_1:51279024-51279043 | Msa0554010:CDS | 45.0% | |
| ACCCCATGAAACGATCGATT+CGG | + | chr4_1:51279028-51279047 | None:intergenic | 45.0% | |
| GGTGGAATTGAAAACGACGA+AGG | + | chr4_1:51279064-51279083 | None:intergenic | 45.0% | |
| GATGTGTTTGGAGAAATCGG+TGG | + | chr4_1:51279082-51279101 | None:intergenic | 45.0% | |
| GTTCAATTGTCTGACGAAGC+TGG | + | chr4_1:51279136-51279155 | None:intergenic | 45.0% | |
| ATATTCATCGGTACACCGAG+CGG | + | chr4_1:51279470-51279489 | None:intergenic | 45.0% | |
| CATTCCTTCCACGAAACTCT+TGG | + | chr4_1:51279522-51279541 | None:intergenic | 45.0% | |
| TGCAAACTGCAAAAAGTGGC+TGG | + | chr4_1:51279552-51279571 | None:intergenic | 45.0% | |
| TGTGTGGAAGTGGGTAAGTT+TGG | - | chr4_1:51280027-51280046 | Msa0554010:CDS | 45.0% | |
| GTGTGGAAGTGGGTAAGTTT+GGG | - | chr4_1:51280028-51280047 | Msa0554010:CDS | 45.0% | |
| GATGATGTCGTTCCTAGCAA+AGG | - | chr4_1:51280197-51280216 | Msa0554010:intron | 45.0% | |
| GACTATTCATGGCCTTTGCT+AGG | + | chr4_1:51280212-51280231 | None:intergenic | 45.0% | |
| AGCAAAGGCCATGAATAGTC+CGG | - | chr4_1:51280212-51280231 | Msa0554010:intron | 45.0% | |
| GAAAATTGAGCCATGAAGCC+CGG | + | chr4_1:51280234-51280253 | None:intergenic | 45.0% | |
| TTACCGCTGGTAAAAAGAGG+CGG | - | chr4_1:51280283-51280302 | Msa0554010:intron | 45.0% | |
| CGTCCATCAAGAGGATTATG+TGG | + | chr4_1:51280348-51280367 | None:intergenic | 45.0% | |
| CAGCCTCATTAATAGAAGGC+TGG | + | chr4_1:51280383-51280402 | None:intergenic | 45.0% | |
| AATGAACAGTTCTGCAAGGG+TGG | - | chr4_1:51280431-51280450 | Msa0554010:intron | 45.0% | |
| TGCATCAAGGTTCTTGATGG+AGG | + | chr4_1:51280460-51280479 | None:intergenic | 45.0% | |
| AGTTCATCCACCCAAGTTTC+TGG | - | chr4_1:51280525-51280544 | Msa0554010:intron | 45.0% | |
| TGTTACACCAGAAACTTGGG+TGG | + | chr4_1:51280535-51280554 | None:intergenic | 45.0% | |
| ! | TCTGAGGTTCCACCTATTTC+TGG | - | chr4_1:51280558-51280577 | Msa0554010:intron | 45.0% |
| ! | CTGAGGTTCCACCTATTTCT+GGG | - | chr4_1:51280559-51280578 | Msa0554010:intron | 45.0% |
| ! | TGGTGTGCTGCTGTAAATTC+GGG | + | chr4_1:51280699-51280718 | None:intergenic | 45.0% |
| TTTGGATGGGACACAGTCTT+TGG | - | chr4_1:51280845-51280864 | Msa0554010:CDS | 45.0% | |
| GGACCATCTTACTCAACAGA+TGG | - | chr4_1:51281070-51281089 | Msa0554010:CDS | 45.0% | |
| ! | GAACAGTGATGGTGAAGTGA+AGG | + | chr4_1:51278842-51278861 | None:intergenic | 45.0% |
| GATCGCGAATTATGACAGCT+GGG | - | chr4_1:51278938-51278957 | Msa0554010:CDS | 45.0% | |
| ! | TAGGTTTTGCTTAGGAACGG+TGG | + | chr4_1:51278982-51279001 | None:intergenic | 45.0% |
| CAACCGAATCGATCGTTTCA+TGG | - | chr4_1:51279022-51279041 | Msa0554010:CDS | 45.0% | |
| ACCGAATCGATCGTTTCATG+GGG | - | chr4_1:51279024-51279043 | Msa0554010:CDS | 45.0% | |
| ACCCCATGAAACGATCGATT+CGG | + | chr4_1:51279028-51279047 | None:intergenic | 45.0% | |
| GGTGGAATTGAAAACGACGA+AGG | + | chr4_1:51279064-51279083 | None:intergenic | 45.0% | |
| GATGTGTTTGGAGAAATCGG+TGG | + | chr4_1:51279082-51279101 | None:intergenic | 45.0% | |
| GTTCAATTGTCTGACGAAGC+TGG | + | chr4_1:51279136-51279155 | None:intergenic | 45.0% | |
| ATATTCATCGGTACACCGAG+CGG | + | chr4_1:51279470-51279489 | None:intergenic | 45.0% | |
| CATTCCTTCCACGAAACTCT+TGG | + | chr4_1:51279522-51279541 | None:intergenic | 45.0% | |
| TGCAAACTGCAAAAAGTGGC+TGG | + | chr4_1:51279552-51279571 | None:intergenic | 45.0% | |
| TGTGTGGAAGTGGGTAAGTT+TGG | - | chr4_1:51280027-51280046 | Msa0554010:CDS | 45.0% | |
| GTGTGGAAGTGGGTAAGTTT+GGG | - | chr4_1:51280028-51280047 | Msa0554010:CDS | 45.0% | |
| GATGATGTCGTTCCTAGCAA+AGG | - | chr4_1:51280197-51280216 | Msa0554010:intron | 45.0% | |
| GACTATTCATGGCCTTTGCT+AGG | + | chr4_1:51280212-51280231 | None:intergenic | 45.0% | |
| AGCAAAGGCCATGAATAGTC+CGG | - | chr4_1:51280212-51280231 | Msa0554010:intron | 45.0% | |
| GAAAATTGAGCCATGAAGCC+CGG | + | chr4_1:51280234-51280253 | None:intergenic | 45.0% | |
| TTACCGCTGGTAAAAAGAGG+CGG | - | chr4_1:51280283-51280302 | Msa0554010:intron | 45.0% | |
| CGTCCATCAAGAGGATTATG+TGG | + | chr4_1:51280348-51280367 | None:intergenic | 45.0% | |
| CAGCCTCATTAATAGAAGGC+TGG | + | chr4_1:51280383-51280402 | None:intergenic | 45.0% | |
| AATGAACAGTTCTGCAAGGG+TGG | - | chr4_1:51280431-51280450 | Msa0554010:intron | 45.0% | |
| TGCATCAAGGTTCTTGATGG+AGG | + | chr4_1:51280460-51280479 | None:intergenic | 45.0% | |
| AGTTCATCCACCCAAGTTTC+TGG | - | chr4_1:51280525-51280544 | Msa0554010:intron | 45.0% | |
| TGTTACACCAGAAACTTGGG+TGG | + | chr4_1:51280535-51280554 | None:intergenic | 45.0% | |
| ! | TCTGAGGTTCCACCTATTTC+TGG | - | chr4_1:51280558-51280577 | Msa0554010:intron | 45.0% |
| ! | CTGAGGTTCCACCTATTTCT+GGG | - | chr4_1:51280559-51280578 | Msa0554010:intron | 45.0% |
| ! | TGGTGTGCTGCTGTAAATTC+GGG | + | chr4_1:51280699-51280718 | None:intergenic | 45.0% |
| TTTGGATGGGACACAGTCTT+TGG | - | chr4_1:51280845-51280864 | Msa0554010:CDS | 45.0% | |
| GGACCATCTTACTCAACAGA+TGG | - | chr4_1:51281070-51281089 | Msa0554010:CDS | 45.0% | |
| GGATCGCGAATTATGACAGC+TGG | - | chr4_1:51278937-51278956 | Msa0554010:CDS | 50.0% | |
| AGATACTTGTCCTGGTGCTC+TGG | - | chr4_1:51279703-51279722 | Msa0554010:CDS | 50.0% | |
| ! | AAATTCAGCACCAGAGCACC+AGG | + | chr4_1:51279716-51279735 | None:intergenic | 50.0% |
| ATGAGCGAATTCCCAGTGGT+CGG | + | chr4_1:51279890-51279909 | None:intergenic | 50.0% | |
| CTTCATGAGCGAATTCCCAG+TGG | + | chr4_1:51279894-51279913 | None:intergenic | 50.0% | |
| CACTGGGAATTCGCTCATGA+AGG | - | chr4_1:51279892-51279911 | Msa0554010:CDS | 50.0% | |
| ACTTCCACACATGACCCAAC+AGG | + | chr4_1:51280018-51280037 | None:intergenic | 50.0% | |
| TGTTGGGTCATGTGTGGAAG+TGG | - | chr4_1:51280017-51280036 | Msa0554010:CDS | 50.0% | |
| GTTGGGTCATGTGTGGAAGT+GGG | - | chr4_1:51280018-51280037 | Msa0554010:CDS | 50.0% | |
| GCAAAGGCCATGAATAGTCC+GGG | - | chr4_1:51280213-51280232 | Msa0554010:intron | 50.0% | |
| CATGAAGCCCGGACTATTCA+TGG | + | chr4_1:51280223-51280242 | None:intergenic | 50.0% | |
| CATGAATAGTCCGGGCTTCA+TGG | - | chr4_1:51280221-51280240 | Msa0554010:intron | 50.0% | |
| AACTATCTTCTTCCTGCCCC+TGG | + | chr4_1:51280311-51280330 | None:intergenic | 50.0% | |
| CATGACTGCCCAGAAATAGG+TGG | + | chr4_1:51280570-51280589 | None:intergenic | 50.0% | |
| ACACAGTCAGTCAACACAGC+AGG | + | chr4_1:51280660-51280679 | None:intergenic | 50.0% | |
| TTTAGGCCAAGCCCACTTAC+TGG | - | chr4_1:51280945-51280964 | Msa0554010:CDS | 50.0% | |
| CGTCTGTGTCTCCAGTAAGT+GGG | + | chr4_1:51280959-51280978 | None:intergenic | 50.0% | |
| TCGTCTGTGTCTCCAGTAAG+TGG | + | chr4_1:51280960-51280979 | None:intergenic | 50.0% | |
| GGATCGCGAATTATGACAGC+TGG | - | chr4_1:51278937-51278956 | Msa0554010:CDS | 50.0% | |
| AGATACTTGTCCTGGTGCTC+TGG | - | chr4_1:51279703-51279722 | Msa0554010:CDS | 50.0% | |
| ! | AAATTCAGCACCAGAGCACC+AGG | + | chr4_1:51279716-51279735 | None:intergenic | 50.0% |
| ATGAGCGAATTCCCAGTGGT+CGG | + | chr4_1:51279890-51279909 | None:intergenic | 50.0% | |
| CTTCATGAGCGAATTCCCAG+TGG | + | chr4_1:51279894-51279913 | None:intergenic | 50.0% | |
| CACTGGGAATTCGCTCATGA+AGG | - | chr4_1:51279892-51279911 | Msa0554010:CDS | 50.0% | |
| ACTTCCACACATGACCCAAC+AGG | + | chr4_1:51280018-51280037 | None:intergenic | 50.0% | |
| TGTTGGGTCATGTGTGGAAG+TGG | - | chr4_1:51280017-51280036 | Msa0554010:CDS | 50.0% | |
| GTTGGGTCATGTGTGGAAGT+GGG | - | chr4_1:51280018-51280037 | Msa0554010:CDS | 50.0% | |
| GCAAAGGCCATGAATAGTCC+GGG | - | chr4_1:51280213-51280232 | Msa0554010:intron | 50.0% | |
| CATGAAGCCCGGACTATTCA+TGG | + | chr4_1:51280223-51280242 | None:intergenic | 50.0% | |
| CATGAATAGTCCGGGCTTCA+TGG | - | chr4_1:51280221-51280240 | Msa0554010:intron | 50.0% | |
| AACTATCTTCTTCCTGCCCC+TGG | + | chr4_1:51280311-51280330 | None:intergenic | 50.0% | |
| CATGACTGCCCAGAAATAGG+TGG | + | chr4_1:51280570-51280589 | None:intergenic | 50.0% | |
| ACACAGTCAGTCAACACAGC+AGG | + | chr4_1:51280660-51280679 | None:intergenic | 50.0% | |
| TTTAGGCCAAGCCCACTTAC+TGG | - | chr4_1:51280945-51280964 | Msa0554010:CDS | 50.0% | |
| CGTCTGTGTCTCCAGTAAGT+GGG | + | chr4_1:51280959-51280978 | None:intergenic | 50.0% | |
| TCGTCTGTGTCTCCAGTAAG+TGG | + | chr4_1:51280960-51280979 | None:intergenic | 50.0% | |
| AAAGGTTGACCCCGACCACT+GGG | - | chr4_1:51279876-51279895 | Msa0554010:CDS | 55.0% | |
| TGAGCGAATTCCCAGTGGTC+GGG | + | chr4_1:51279889-51279908 | None:intergenic | 55.0% | |
| CCACACATGACCCAACAGGT+GGG | + | chr4_1:51280014-51280033 | None:intergenic | 55.0% | |
| TCCACACATGACCCAACAGG+TGG | + | chr4_1:51280015-51280034 | None:intergenic | 55.0% | |
| TGGGCAACGTGTGCAAGTGA+TGG | - | chr4_1:51280158-51280177 | Msa0554010:intron | 55.0% | |
| ! | GAGCCGCCTCTTTTTACCAG+CGG | + | chr4_1:51280289-51280308 | None:intergenic | 55.0% |
| TGGTAAAAAGAGGCGGCTCC+AGG | - | chr4_1:51280290-51280309 | Msa0554010:intron | 55.0% | |
| GGTAAAAAGAGGCGGCTCCA+GGG | - | chr4_1:51280291-51280310 | Msa0554010:intron | 55.0% | |
| GTAAAAAGAGGCGGCTCCAG+GGG | - | chr4_1:51280292-51280311 | Msa0554010:intron | 55.0% | |
| ! | GTGTCTCCAGTAAGTGGGCT+TGG | + | chr4_1:51280954-51280973 | None:intergenic | 55.0% |
| AAAGGTTGACCCCGACCACT+GGG | - | chr4_1:51279876-51279895 | Msa0554010:CDS | 55.0% | |
| TGAGCGAATTCCCAGTGGTC+GGG | + | chr4_1:51279889-51279908 | None:intergenic | 55.0% | |
| CCACACATGACCCAACAGGT+GGG | + | chr4_1:51280014-51280033 | None:intergenic | 55.0% | |
| TCCACACATGACCCAACAGG+TGG | + | chr4_1:51280015-51280034 | None:intergenic | 55.0% | |
| TGGGCAACGTGTGCAAGTGA+TGG | - | chr4_1:51280158-51280177 | Msa0554010:intron | 55.0% | |
| ! | GAGCCGCCTCTTTTTACCAG+CGG | + | chr4_1:51280289-51280308 | None:intergenic | 55.0% |
| TGGTAAAAAGAGGCGGCTCC+AGG | - | chr4_1:51280290-51280309 | Msa0554010:intron | 55.0% | |
| GGTAAAAAGAGGCGGCTCCA+GGG | - | chr4_1:51280291-51280310 | Msa0554010:intron | 55.0% | |
| GTAAAAAGAGGCGGCTCCAG+GGG | - | chr4_1:51280292-51280311 | Msa0554010:intron | 55.0% | |
| ! | GTGTCTCCAGTAAGTGGGCT+TGG | + | chr4_1:51280954-51280973 | None:intergenic | 55.0% |
| GGTGATTGGAGAGGGAGCTG+TGG | - | chr4_1:51279341-51279360 | Msa0554010:CDS | 60.0% | |
| GAAAGGTTGACCCCGACCAC+TGG | - | chr4_1:51279875-51279894 | Msa0554010:CDS | 60.0% | |
| GAGCGAATTCCCAGTGGTCG+GGG | + | chr4_1:51279888-51279907 | None:intergenic | 60.0% | |
| AAGCCGCAGAACCCACCTGT+TGG | - | chr4_1:51280000-51280019 | Msa0554010:CDS | 60.0% | |
| AGCCGCAGAACCCACCTGTT+GGG | - | chr4_1:51280001-51280020 | Msa0554010:CDS | 60.0% | |
| ! | GACCCAACAGGTGGGTTCTG+CGG | + | chr4_1:51280006-51280025 | None:intergenic | 60.0% |
| CCCACCTGTTGGGTCATGTG+TGG | - | chr4_1:51280011-51280030 | Msa0554010:CDS | 60.0% | |
| GGTGATTGGAGAGGGAGCTG+TGG | - | chr4_1:51279341-51279360 | Msa0554010:CDS | 60.0% | |
| GAAAGGTTGACCCCGACCAC+TGG | - | chr4_1:51279875-51279894 | Msa0554010:CDS | 60.0% | |
| GAGCGAATTCCCAGTGGTCG+GGG | + | chr4_1:51279888-51279907 | None:intergenic | 60.0% | |
| AAGCCGCAGAACCCACCTGT+TGG | - | chr4_1:51280000-51280019 | Msa0554010:CDS | 60.0% | |
| AGCCGCAGAACCCACCTGTT+GGG | - | chr4_1:51280001-51280020 | Msa0554010:CDS | 60.0% | |
| ! | GACCCAACAGGTGGGTTCTG+CGG | + | chr4_1:51280006-51280025 | None:intergenic | 60.0% |
| CCCACCTGTTGGGTCATGTG+TGG | - | chr4_1:51280011-51280030 | Msa0554010:CDS | 60.0% | |
| ! | GGTGCTGCCATGCTTCCGCT+CGG | - | chr4_1:51279452-51279471 | Msa0554010:CDS | 65.0% |
| CGGTACACCGAGCGGAAGCA+TGG | + | chr4_1:51279462-51279481 | None:intergenic | 65.0% | |
| ! | GGTGCTGCCATGCTTCCGCT+CGG | - | chr4_1:51279452-51279471 | Msa0554010:CDS | 65.0% |
| CGGTACACCGAGCGGAAGCA+TGG | + | chr4_1:51279462-51279481 | None:intergenic | 65.0% | |
| AAAGAGGCGGCTCCAGGGGC+AGG | - | chr4_1:51280296-51280315 | Msa0554010:intron | 70.0% | |
| AAAGAGGCGGCTCCAGGGGC+AGG | - | chr4_1:51280296-51280315 | Msa0554010:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 51278820 | 51281127 | 51278820 | ID=Msa0554010;Name=Msa0554010 |
| chr4_1 | mRNA | 51278820 | 51281127 | 51278820 | ID=Msa0554010-mRNA-1;Parent=Msa0554010;Name=Msa0554010-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.5|0|1|0.5|0.66|3|0|563 |
| chr4_1 | exon | 51280782 | 51281127 | 51280782 | ID=Msa0554010-mRNA-1:exon:14637;Parent=Msa0554010-mRNA-1 |
| chr4_1 | exon | 51280352 | 51280437 | 51280352 | ID=Msa0554010-mRNA-1:exon:14636;Parent=Msa0554010-mRNA-1 |
| chr4_1 | exon | 51278820 | 51280079 | 51278820 | ID=Msa0554010-mRNA-1:exon:14635;Parent=Msa0554010-mRNA-1 |
| chr4_1 | CDS | 51280782 | 51281127 | 51280782 | ID=Msa0554010-mRNA-1:cds;Parent=Msa0554010-mRNA-1 |
| chr4_1 | CDS | 51280352 | 51280437 | 51280352 | ID=Msa0554010-mRNA-1:cds;Parent=Msa0554010-mRNA-1 |
| chr4_1 | CDS | 51278820 | 51280079 | 51278820 | ID=Msa0554010-mRNA-1:cds;Parent=Msa0554010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
