Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554390 | XP_024625265.1 | 70.270 | 111 | 3 | 1 | 1 | 81 | 1 | 111 | 4.70e-39 | 152 |
| Msa0554390 | XP_024625265.1 | 85.849 | 106 | 12 | 2 | 80 | 183 | 629 | 733 | 1.98e-46 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554390 | A0A072VK17 | 84.375 | 64 | 10 | 0 | 18 | 81 | 46 | 109 | 7.42e-31 | 118 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0554390 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554390 | MtrunA17_Chr3g0082121 | 77.778 | 63 | 14 | 0 | 18 | 80 | 55 | 117 | 2.28e-27 | 107 |
| Msa0554390 | MtrunA17_Chr3g0082121 | 65.306 | 49 | 17 | 0 | 80 | 128 | 628 | 676 | 9.87e-11 | 59.7 |
| Msa0554390 | MtrunA17_Chr5g0401121 | 71.429 | 63 | 18 | 0 | 18 | 80 | 68 | 130 | 1.55e-23 | 91.3 |
| Msa0554390 | MtrunA17_Chr6g0458391 | 47.619 | 63 | 33 | 0 | 18 | 80 | 237 | 299 | 1.53e-14 | 70.9 |
| Msa0554390 | MtrunA17_Chr1g0203721 | 46.774 | 62 | 33 | 0 | 18 | 79 | 75 | 136 | 1.42e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 26 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGACAATTCTGTTGATAAAT+TGG | 0.199895 | 4_1:-51633444 | Msa0554390:intron |
| CATGAATCCGTCGTCTATTT+TGG | 0.206115 | 4_1:-51633468 | Msa0554390:CDS |
| TTTGGTATTCGTCGAGAATA+TGG | 0.265133 | 4_1:-51633287 | Msa0554390:CDS |
| AATGAGTATAGTAAAAGAAT+TGG | 0.336174 | 4_1:-51633311 | Msa0554390:CDS |
| TATAGTAAAAGAATTGGATT+TGG | 0.393932 | 4_1:-51633305 | Msa0554390:CDS |
| CTTGACAACGGTTTCCATGC+TGG | 0.393949 | 4_1:+51631426 | None:intergenic |
| GCTGGACTCTTCATAAACTT+TGG | 0.408472 | 4_1:+51631549 | None:intergenic |
| GACAAAAGACGTCAACCGAC+TGG | 0.454042 | 4_1:-51633191 | Msa0554390:CDS |
| GAAACCGTTGTCAAGGCAAA+AGG | 0.483784 | 4_1:-51631418 | Msa0554390:CDS |
| TTTATCATTTCCAAGTGATA+CGG | 0.494676 | 4_1:+51631459 | None:intergenic |
| TTGGTATTCGTCGAGAATAT+GGG | 0.496079 | 4_1:-51633286 | Msa0554390:CDS |
| TCTACGGCAGAAACTAGAAC+CGG | 0.508196 | 4_1:-51633164 | Msa0554390:CDS |
| CAAAATAGTTGAAGATATGT+TGG | 0.512003 | 4_1:-51631527 | Msa0554390:CDS |
| ACAAAAGACGTCAACCGACT+GGG | 0.550284 | 4_1:-51633190 | Msa0554390:CDS |
| TCAACCGACTGGGGAGTCTA+CGG | 0.568520 | 4_1:-51633180 | Msa0554390:CDS |
| CAGCATGGAAACCGTTGTCA+AGG | 0.570861 | 4_1:-51631425 | Msa0554390:CDS |
| TAAAGAGAAAGAAGCCAGCA+TGG | 0.582901 | 4_1:-51631440 | Msa0554390:CDS |
| GTTCAGGTAACCGTATCACT+TGG | 0.589853 | 4_1:-51631469 | Msa0554390:intron |
| AGATTCACATGCTACAAAGA+AGG | 0.592653 | 4_1:-51633227 | Msa0554390:CDS |
| AAATCTTGGATTGAGAAAGA+AGG | 0.598872 | 4_1:-51631352 | Msa0554390:CDS |
| CTACGGCAGAAACTAGAACC+GGG | 0.648731 | 4_1:-51633163 | Msa0554390:intron |
| GGATGGAGAATCAAGTGGAA+TGG | 0.662094 | 4_1:-51631491 | Msa0554390:intron |
| TCTGCCGTAGACTCCCCAGT+CGG | 0.665919 | 4_1:+51633176 | None:intergenic |
| CAAAAGACGTCAACCGACTG+GGG | 0.676456 | 4_1:-51633189 | Msa0554390:CDS |
| TGTGTGGATGGAGAATCAAG+TGG | 0.678307 | 4_1:-51631496 | Msa0554390:CDS |
| TTGTCTACCAAAATAGACGA+CGG | 0.691097 | 4_1:+51633461 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAGTATAGTAAAAGAAT+TGG | - | chr4_1:51631449-51631468 | Msa0554390:CDS | 20.0% |
| !! | TATAGTAAAAGAATTGGATT+TGG | - | chr4_1:51631455-51631474 | Msa0554390:CDS | 20.0% |
| !!! | ATATATTCATGCAAATCTTT+TGG | + | chr4_1:51631806-51631825 | None:intergenic | 20.0% |
| !!! | TTTCTTTTATGACTTTCAAA+TGG | - | chr4_1:51631973-51631992 | Msa0554390:intron | 20.0% |
| !!! | AGCAAATAACAAACATATTT+TGG | - | chr4_1:51632005-51632024 | Msa0554390:intron | 20.0% |
| !!! | GCAAATAACAAACATATTTT+GGG | - | chr4_1:51632006-51632025 | Msa0554390:intron | 20.0% |
| !!! | TTTTTCGATTTAAGGAAAAA+TGG | - | chr4_1:51632515-51632534 | Msa0554390:intron | 20.0% |
| !!! | TTTTCGATTTAAGGAAAAAT+GGG | - | chr4_1:51632516-51632535 | Msa0554390:intron | 20.0% |
| !! | TATTTAAATCTGACTTCAAA+TGG | + | chr4_1:51632624-51632643 | None:intergenic | 20.0% |
| !!! | ATTATGATAATGTAAAAGAG+AGG | - | chr4_1:51632881-51632900 | Msa0554390:intron | 20.0% |
| !! | AATGAGTATAGTAAAAGAAT+TGG | - | chr4_1:51631449-51631468 | Msa0554390:CDS | 20.0% |
| !! | TATAGTAAAAGAATTGGATT+TGG | - | chr4_1:51631455-51631474 | Msa0554390:CDS | 20.0% |
| !!! | ATATATTCATGCAAATCTTT+TGG | + | chr4_1:51631806-51631825 | None:intergenic | 20.0% |
| !!! | TTTCTTTTATGACTTTCAAA+TGG | - | chr4_1:51631973-51631992 | Msa0554390:intron | 20.0% |
| !!! | AGCAAATAACAAACATATTT+TGG | - | chr4_1:51632005-51632024 | Msa0554390:intron | 20.0% |
| !!! | GCAAATAACAAACATATTTT+GGG | - | chr4_1:51632006-51632025 | Msa0554390:intron | 20.0% |
| !!! | TTTTTCGATTTAAGGAAAAA+TGG | - | chr4_1:51632515-51632534 | Msa0554390:intron | 20.0% |
| !!! | TTTTCGATTTAAGGAAAAAT+GGG | - | chr4_1:51632516-51632535 | Msa0554390:intron | 20.0% |
| !! | TATTTAAATCTGACTTCAAA+TGG | + | chr4_1:51632624-51632643 | None:intergenic | 20.0% |
| !!! | ATTATGATAATGTAAAAGAG+AGG | - | chr4_1:51632881-51632900 | Msa0554390:intron | 20.0% |
| !! | AGACAATTCTGTTGATAAAT+TGG | - | chr4_1:51631316-51631335 | Msa0554390:CDS | 25.0% |
| ! | CAATATTCTTGAACAAAATG+AGG | - | chr4_1:51631343-51631362 | Msa0554390:CDS | 25.0% |
| ! | ACAAGCATCACAAATTATAA+TGG | - | chr4_1:51631760-51631779 | Msa0554390:intron | 25.0% |
| ! | CAAGCATCACAAATTATAAT+GGG | - | chr4_1:51631761-51631780 | Msa0554390:intron | 25.0% |
| ! | TGAAAGTCATAAAAGAAAGA+TGG | + | chr4_1:51631971-51631990 | None:intergenic | 25.0% |
| ! | CACAAATGATCAATGATTAT+GGG | - | chr4_1:51632035-51632054 | Msa0554390:intron | 25.0% |
| ! | TTGTTGGACTTAATAATCAT+CGG | - | chr4_1:51632128-51632147 | Msa0554390:intron | 25.0% |
| !! | AAGATGAATTTTTGAATGCA+TGG | - | chr4_1:51632440-51632459 | Msa0554390:intron | 25.0% |
| !!! | GCATATGATTTTTCGATTTA+AGG | - | chr4_1:51632507-51632526 | Msa0554390:intron | 25.0% |
| !!! | GAATTCCTCAAATATTTTTG+GGG | + | chr4_1:51632791-51632810 | None:intergenic | 25.0% |
| !! | GGAATTCCTCAAATATTTTT+GGG | + | chr4_1:51632792-51632811 | None:intergenic | 25.0% |
| !! | TGGAATTCCTCAAATATTTT+TGG | + | chr4_1:51632793-51632812 | None:intergenic | 25.0% |
| ! | CAAAATAGTTGAAGATATGT+TGG | - | chr4_1:51633233-51633252 | Msa0554390:CDS | 25.0% |
| ! | TTTATCATTTCCAAGTGATA+CGG | + | chr4_1:51633304-51633323 | None:intergenic | 25.0% |
| !! | CTGTGATTTTCTCTTTTTTT+GGG | + | chr4_1:51633460-51633479 | None:intergenic | 25.0% |
| !! | AGACAATTCTGTTGATAAAT+TGG | - | chr4_1:51631316-51631335 | Msa0554390:CDS | 25.0% |
| ! | CAATATTCTTGAACAAAATG+AGG | - | chr4_1:51631343-51631362 | Msa0554390:CDS | 25.0% |
| ! | ACAAGCATCACAAATTATAA+TGG | - | chr4_1:51631760-51631779 | Msa0554390:intron | 25.0% |
| ! | CAAGCATCACAAATTATAAT+GGG | - | chr4_1:51631761-51631780 | Msa0554390:intron | 25.0% |
| ! | TGAAAGTCATAAAAGAAAGA+TGG | + | chr4_1:51631971-51631990 | None:intergenic | 25.0% |
| ! | CACAAATGATCAATGATTAT+GGG | - | chr4_1:51632035-51632054 | Msa0554390:intron | 25.0% |
| ! | TTGTTGGACTTAATAATCAT+CGG | - | chr4_1:51632128-51632147 | Msa0554390:intron | 25.0% |
| !! | AAGATGAATTTTTGAATGCA+TGG | - | chr4_1:51632440-51632459 | Msa0554390:intron | 25.0% |
| !!! | GCATATGATTTTTCGATTTA+AGG | - | chr4_1:51632507-51632526 | Msa0554390:intron | 25.0% |
| !!! | GAATTCCTCAAATATTTTTG+GGG | + | chr4_1:51632791-51632810 | None:intergenic | 25.0% |
| !! | GGAATTCCTCAAATATTTTT+GGG | + | chr4_1:51632792-51632811 | None:intergenic | 25.0% |
| !! | TGGAATTCCTCAAATATTTT+TGG | + | chr4_1:51632793-51632812 | None:intergenic | 25.0% |
| ! | CAAAATAGTTGAAGATATGT+TGG | - | chr4_1:51633233-51633252 | Msa0554390:CDS | 25.0% |
| ! | TTTATCATTTCCAAGTGATA+CGG | + | chr4_1:51633304-51633323 | None:intergenic | 25.0% |
| !! | CTGTGATTTTCTCTTTTTTT+GGG | + | chr4_1:51633460-51633479 | None:intergenic | 25.0% |
| AAATTCATAAGCATCTACCT+CGG | + | chr4_1:51631426-51631445 | None:intergenic | 30.0% | |
| GGGAATAAAAGCAAAAAAGA+CGG | - | chr4_1:51631494-51631513 | Msa0554390:CDS | 30.0% | |
| GGAATAAAAGCAAAAAAGAC+GGG | - | chr4_1:51631495-51631514 | Msa0554390:CDS | 30.0% | |
| GAATAAAAGCAAAAAAGACG+GGG | - | chr4_1:51631496-51631515 | Msa0554390:CDS | 30.0% | |
| ATTTCACTTGATCGAAAGAT+AGG | - | chr4_1:51631638-51631657 | Msa0554390:intron | 30.0% | |
| TTTCACTTGATCGAAAGATA+GGG | - | chr4_1:51631639-51631658 | Msa0554390:intron | 30.0% | |
| ! | ATTATAATGGGAGATGAATC+TGG | - | chr4_1:51631773-51631792 | Msa0554390:intron | 30.0% |
| ! | AGAATTTGCTTCGAACAAAA+AGG | - | chr4_1:51631879-51631898 | Msa0554390:intron | 30.0% |
| GCACAAATGATCAATGATTA+TGG | - | chr4_1:51632034-51632053 | Msa0554390:intron | 30.0% | |
| ATCAATGATTATGGGTACTT+TGG | - | chr4_1:51632043-51632062 | Msa0554390:intron | 30.0% | |
| ACCACATACAAGACAAATAA+GGG | - | chr4_1:51632085-51632104 | Msa0554390:intron | 30.0% | |
| ACAAGACAAATAAGGGTTAT+CGG | - | chr4_1:51632092-51632111 | Msa0554390:intron | 30.0% | |
| ! | AAACAATACCTTCTTTTCAG+TGG | - | chr4_1:51632188-51632207 | Msa0554390:intron | 30.0% |
| TCAAATAACCACTGAAAAGA+AGG | + | chr4_1:51632199-51632218 | None:intergenic | 30.0% | |
| ! | TGAAACTTTTCTCAAAGCAA+TGG | - | chr4_1:51632216-51632235 | Msa0554390:intron | 30.0% |
| ! | GAAACTTTTCTCAAAGCAAT+GGG | - | chr4_1:51632217-51632236 | Msa0554390:intron | 30.0% |
| AAAGCCTAAAACCATTCTAA+CGG | - | chr4_1:51632246-51632265 | Msa0554390:intron | 30.0% | |
| ATATAAGACAAAACGCTCTA+AGG | - | chr4_1:51632341-51632360 | Msa0554390:intron | 30.0% | |
| !! | ACTTGTTGAGCATAATGTTT+TGG | - | chr4_1:51632471-51632490 | Msa0554390:intron | 30.0% |
| !!! | ATAATGTTTTGGAAGGTTCA+TGG | - | chr4_1:51632482-51632501 | Msa0554390:intron | 30.0% |
| ACCTAGATTGAAAATGAAGA+AGG | - | chr4_1:51632732-51632751 | Msa0554390:intron | 30.0% | |
| TTACACCCCAAAAATATTTG+AGG | - | chr4_1:51632783-51632802 | Msa0554390:intron | 30.0% | |
| AATATTTGAGGAATTCCAAG+AGG | - | chr4_1:51632795-51632814 | Msa0554390:intron | 30.0% | |
| ATATCAAGACACTTGCATAA+AGG | - | chr4_1:51632828-51632847 | Msa0554390:intron | 30.0% | |
| AACACTATATACTAAAGCGA+TGG | - | chr4_1:51633028-51633047 | Msa0554390:intron | 30.0% | |
| GAAGTAATCAAGATTGGAAA+GGG | - | chr4_1:51633070-51633089 | Msa0554390:intron | 30.0% | |
| ATGTCCTCCAATGATTAAAT+TGG | - | chr4_1:51633146-51633165 | Msa0554390:intron | 30.0% | |
| ! | CATATCTTCAACTATTTTGC+TGG | + | chr4_1:51633232-51633251 | None:intergenic | 30.0% |
| !!! | AGATTTAGCTCGTTTTTTAG+TGG | + | chr4_1:51633394-51633413 | None:intergenic | 30.0% |
| CTAAAAAACGAGCTAAATCT+TGG | - | chr4_1:51633394-51633413 | Msa0554390:intron | 30.0% | |
| AAATCTTGGATTGAGAAAGA+AGG | - | chr4_1:51633408-51633427 | Msa0554390:intron | 30.0% | |
| ! | CCTGTGATTTTCTCTTTTTT+TGG | + | chr4_1:51633461-51633480 | None:intergenic | 30.0% |
| CCAAAAAAAGAGAAAATCAC+AGG | - | chr4_1:51633458-51633477 | Msa0554390:CDS | 30.0% | |
| AAATTCATAAGCATCTACCT+CGG | + | chr4_1:51631426-51631445 | None:intergenic | 30.0% | |
| GGGAATAAAAGCAAAAAAGA+CGG | - | chr4_1:51631494-51631513 | Msa0554390:CDS | 30.0% | |
| GGAATAAAAGCAAAAAAGAC+GGG | - | chr4_1:51631495-51631514 | Msa0554390:CDS | 30.0% | |
| GAATAAAAGCAAAAAAGACG+GGG | - | chr4_1:51631496-51631515 | Msa0554390:CDS | 30.0% | |
| ATTTCACTTGATCGAAAGAT+AGG | - | chr4_1:51631638-51631657 | Msa0554390:intron | 30.0% | |
| TTTCACTTGATCGAAAGATA+GGG | - | chr4_1:51631639-51631658 | Msa0554390:intron | 30.0% | |
| ! | ATTATAATGGGAGATGAATC+TGG | - | chr4_1:51631773-51631792 | Msa0554390:intron | 30.0% |
| ! | AGAATTTGCTTCGAACAAAA+AGG | - | chr4_1:51631879-51631898 | Msa0554390:intron | 30.0% |
| GCACAAATGATCAATGATTA+TGG | - | chr4_1:51632034-51632053 | Msa0554390:intron | 30.0% | |
| ATCAATGATTATGGGTACTT+TGG | - | chr4_1:51632043-51632062 | Msa0554390:intron | 30.0% | |
| ACCACATACAAGACAAATAA+GGG | - | chr4_1:51632085-51632104 | Msa0554390:intron | 30.0% | |
| ACAAGACAAATAAGGGTTAT+CGG | - | chr4_1:51632092-51632111 | Msa0554390:intron | 30.0% | |
| ! | AAACAATACCTTCTTTTCAG+TGG | - | chr4_1:51632188-51632207 | Msa0554390:intron | 30.0% |
| TCAAATAACCACTGAAAAGA+AGG | + | chr4_1:51632199-51632218 | None:intergenic | 30.0% | |
| ! | TGAAACTTTTCTCAAAGCAA+TGG | - | chr4_1:51632216-51632235 | Msa0554390:intron | 30.0% |
| ! | GAAACTTTTCTCAAAGCAAT+GGG | - | chr4_1:51632217-51632236 | Msa0554390:intron | 30.0% |
| AAAGCCTAAAACCATTCTAA+CGG | - | chr4_1:51632246-51632265 | Msa0554390:intron | 30.0% | |
| ATATAAGACAAAACGCTCTA+AGG | - | chr4_1:51632341-51632360 | Msa0554390:intron | 30.0% | |
| !! | ACTTGTTGAGCATAATGTTT+TGG | - | chr4_1:51632471-51632490 | Msa0554390:intron | 30.0% |
| !!! | ATAATGTTTTGGAAGGTTCA+TGG | - | chr4_1:51632482-51632501 | Msa0554390:intron | 30.0% |
| ACCTAGATTGAAAATGAAGA+AGG | - | chr4_1:51632732-51632751 | Msa0554390:intron | 30.0% | |
| TTACACCCCAAAAATATTTG+AGG | - | chr4_1:51632783-51632802 | Msa0554390:intron | 30.0% | |
| AATATTTGAGGAATTCCAAG+AGG | - | chr4_1:51632795-51632814 | Msa0554390:intron | 30.0% | |
| ATATCAAGACACTTGCATAA+AGG | - | chr4_1:51632828-51632847 | Msa0554390:intron | 30.0% | |
| AACACTATATACTAAAGCGA+TGG | - | chr4_1:51633028-51633047 | Msa0554390:intron | 30.0% | |
| GAAGTAATCAAGATTGGAAA+GGG | - | chr4_1:51633070-51633089 | Msa0554390:intron | 30.0% | |
| ATGTCCTCCAATGATTAAAT+TGG | - | chr4_1:51633146-51633165 | Msa0554390:intron | 30.0% | |
| ! | CATATCTTCAACTATTTTGC+TGG | + | chr4_1:51633232-51633251 | None:intergenic | 30.0% |
| !!! | AGATTTAGCTCGTTTTTTAG+TGG | + | chr4_1:51633394-51633413 | None:intergenic | 30.0% |
| CTAAAAAACGAGCTAAATCT+TGG | - | chr4_1:51633394-51633413 | Msa0554390:intron | 30.0% | |
| AAATCTTGGATTGAGAAAGA+AGG | - | chr4_1:51633408-51633427 | Msa0554390:intron | 30.0% | |
| ! | CCTGTGATTTTCTCTTTTTT+TGG | + | chr4_1:51633461-51633480 | None:intergenic | 30.0% |
| CCAAAAAAAGAGAAAATCAC+AGG | - | chr4_1:51633458-51633477 | Msa0554390:CDS | 30.0% | |
| TTGTCTACCAAAATAGACGA+CGG | + | chr4_1:51631302-51631321 | None:intergenic | 35.0% | |
| CTTGAACAAAATGAGGAACA+TGG | - | chr4_1:51631350-51631369 | Msa0554390:CDS | 35.0% | |
| TCAAATATCATATCCAAGCG+AGG | + | chr4_1:51631401-51631420 | None:intergenic | 35.0% | |
| GGATATGATATTTGAATCCG+AGG | - | chr4_1:51631406-51631425 | Msa0554390:CDS | 35.0% | |
| TTTGGTATTCGTCGAGAATA+TGG | - | chr4_1:51631473-51631492 | Msa0554390:intron | 35.0% | |
| TTGGTATTCGTCGAGAATAT+GGG | - | chr4_1:51631474-51631493 | Msa0554390:intron | 35.0% | |
| AGATTCACATGCTACAAAGA+AGG | - | chr4_1:51631533-51631552 | Msa0554390:CDS | 35.0% | |
| TCGAAAGATAGGGAAATACA+AGG | - | chr4_1:51631649-51631668 | Msa0554390:intron | 35.0% | |
| ATCATGTGAACATACTCTTC+CGG | + | chr4_1:51631713-51631732 | None:intergenic | 35.0% | |
| TTTGCTTCGAACAAAAAGGA+TGG | - | chr4_1:51631883-51631902 | Msa0554390:intron | 35.0% | |
| TCACTAAAGTATGGTGAAGT+GGG | - | chr4_1:51631908-51631927 | Msa0554390:intron | 35.0% | |
| CACCACATACAAGACAAATA+AGG | - | chr4_1:51632084-51632103 | Msa0554390:intron | 35.0% | |
| ! | ACCCTTATTTGTCTTGTATG+TGG | + | chr4_1:51632089-51632108 | None:intergenic | 35.0% |
| ! | CATCGGCAAACAATCATTTT+TGG | - | chr4_1:51632145-51632164 | Msa0554390:intron | 35.0% |
| ! | TGATCCGTTAGAATGGTTTT+AGG | + | chr4_1:51632253-51632272 | None:intergenic | 35.0% |
| GGGTATTTCTTTAGTTATGC+CGG | - | chr4_1:51632291-51632310 | Msa0554390:intron | 35.0% | |
| ! | CATTTCATGGATTGTGTACT+TGG | - | chr4_1:51632317-51632336 | Msa0554390:intron | 35.0% |
| GCTTACTCTGTTGATATAGA+TGG | + | chr4_1:51632375-51632394 | None:intergenic | 35.0% | |
| ATGCATAGATCTACATGAAG+AGG | - | chr4_1:51632417-51632436 | Msa0554390:intron | 35.0% | |
| !! | GTTGAGCATAATGTTTTGGA+AGG | - | chr4_1:51632475-51632494 | Msa0554390:intron | 35.0% |
| GATTTAAGGAAAAATGGGCA+TGG | - | chr4_1:51632521-51632540 | Msa0554390:intron | 35.0% | |
| ! | CACTTTAAAAGAGCTGTCAA+TGG | - | chr4_1:51632661-51632680 | Msa0554390:intron | 35.0% |
| ! | GCCTTCTTCATTTTCAATCT+AGG | + | chr4_1:51632736-51632755 | None:intergenic | 35.0% |
| !!! | TTTTGGGGTGTAAACATTTC+CGG | + | chr4_1:51632776-51632795 | None:intergenic | 35.0% |
| TGTAAAAGAGAGGACAGTTA+TGG | - | chr4_1:51632891-51632910 | Msa0554390:intron | 35.0% | |
| GTAAAAGAGAGGACAGTTAT+GGG | - | chr4_1:51632892-51632911 | Msa0554390:intron | 35.0% | |
| !!! | CAAGAAACTTTTAGTTCCGT+AGG | + | chr4_1:51632922-51632941 | None:intergenic | 35.0% |
| ! | TGTCGTAAATTTGAGACACA+CGG | - | chr4_1:51632946-51632965 | Msa0554390:intron | 35.0% |
| !! | TAGTCATGCTTTGAAAGTGT+TGG | - | chr4_1:51632978-51632997 | Msa0554390:intron | 35.0% |
| CGCTTTAGTATATAGTGTTC+AGG | + | chr4_1:51633027-51633046 | None:intergenic | 35.0% | |
| GGAAGTAATCAAGATTGGAA+AGG | - | chr4_1:51633069-51633088 | Msa0554390:intron | 35.0% | |
| TGAAATCCCATTTCATGAAG+CGG | - | chr4_1:51633112-51633131 | Msa0554390:intron | 35.0% | |
| TTGGCCAATTTAATCATTGG+AGG | + | chr4_1:51633153-51633172 | None:intergenic | 35.0% | |
| CTGTTGGCCAATTTAATCAT+TGG | + | chr4_1:51633156-51633175 | None:intergenic | 35.0% | |
| TATGTTGGCCAAAAAATGTG+TGG | - | chr4_1:51633248-51633267 | Msa0554390:CDS | 35.0% | |
| !!! | TTCTCCATCCACACATTTTT+TGG | + | chr4_1:51633259-51633278 | None:intergenic | 35.0% |
| TTGTCTACCAAAATAGACGA+CGG | + | chr4_1:51631302-51631321 | None:intergenic | 35.0% | |
| CTTGAACAAAATGAGGAACA+TGG | - | chr4_1:51631350-51631369 | Msa0554390:CDS | 35.0% | |
| TCAAATATCATATCCAAGCG+AGG | + | chr4_1:51631401-51631420 | None:intergenic | 35.0% | |
| GGATATGATATTTGAATCCG+AGG | - | chr4_1:51631406-51631425 | Msa0554390:CDS | 35.0% | |
| TTTGGTATTCGTCGAGAATA+TGG | - | chr4_1:51631473-51631492 | Msa0554390:intron | 35.0% | |
| TTGGTATTCGTCGAGAATAT+GGG | - | chr4_1:51631474-51631493 | Msa0554390:intron | 35.0% | |
| AGATTCACATGCTACAAAGA+AGG | - | chr4_1:51631533-51631552 | Msa0554390:CDS | 35.0% | |
| TCGAAAGATAGGGAAATACA+AGG | - | chr4_1:51631649-51631668 | Msa0554390:intron | 35.0% | |
| ATCATGTGAACATACTCTTC+CGG | + | chr4_1:51631713-51631732 | None:intergenic | 35.0% | |
| TTTGCTTCGAACAAAAAGGA+TGG | - | chr4_1:51631883-51631902 | Msa0554390:intron | 35.0% | |
| TCACTAAAGTATGGTGAAGT+GGG | - | chr4_1:51631908-51631927 | Msa0554390:intron | 35.0% | |
| CACCACATACAAGACAAATA+AGG | - | chr4_1:51632084-51632103 | Msa0554390:intron | 35.0% | |
| ! | ACCCTTATTTGTCTTGTATG+TGG | + | chr4_1:51632089-51632108 | None:intergenic | 35.0% |
| ! | CATCGGCAAACAATCATTTT+TGG | - | chr4_1:51632145-51632164 | Msa0554390:intron | 35.0% |
| ! | TGATCCGTTAGAATGGTTTT+AGG | + | chr4_1:51632253-51632272 | None:intergenic | 35.0% |
| GGGTATTTCTTTAGTTATGC+CGG | - | chr4_1:51632291-51632310 | Msa0554390:intron | 35.0% | |
| ! | CATTTCATGGATTGTGTACT+TGG | - | chr4_1:51632317-51632336 | Msa0554390:intron | 35.0% |
| GCTTACTCTGTTGATATAGA+TGG | + | chr4_1:51632375-51632394 | None:intergenic | 35.0% | |
| ATGCATAGATCTACATGAAG+AGG | - | chr4_1:51632417-51632436 | Msa0554390:intron | 35.0% | |
| !! | GTTGAGCATAATGTTTTGGA+AGG | - | chr4_1:51632475-51632494 | Msa0554390:intron | 35.0% |
| GATTTAAGGAAAAATGGGCA+TGG | - | chr4_1:51632521-51632540 | Msa0554390:intron | 35.0% | |
| ! | CACTTTAAAAGAGCTGTCAA+TGG | - | chr4_1:51632661-51632680 | Msa0554390:intron | 35.0% |
| ! | GCCTTCTTCATTTTCAATCT+AGG | + | chr4_1:51632736-51632755 | None:intergenic | 35.0% |
| !!! | TTTTGGGGTGTAAACATTTC+CGG | + | chr4_1:51632776-51632795 | None:intergenic | 35.0% |
| TGTAAAAGAGAGGACAGTTA+TGG | - | chr4_1:51632891-51632910 | Msa0554390:intron | 35.0% | |
| GTAAAAGAGAGGACAGTTAT+GGG | - | chr4_1:51632892-51632911 | Msa0554390:intron | 35.0% | |
| !!! | CAAGAAACTTTTAGTTCCGT+AGG | + | chr4_1:51632922-51632941 | None:intergenic | 35.0% |
| ! | TGTCGTAAATTTGAGACACA+CGG | - | chr4_1:51632946-51632965 | Msa0554390:intron | 35.0% |
| !! | TAGTCATGCTTTGAAAGTGT+TGG | - | chr4_1:51632978-51632997 | Msa0554390:intron | 35.0% |
| CGCTTTAGTATATAGTGTTC+AGG | + | chr4_1:51633027-51633046 | None:intergenic | 35.0% | |
| GGAAGTAATCAAGATTGGAA+AGG | - | chr4_1:51633069-51633088 | Msa0554390:intron | 35.0% | |
| TGAAATCCCATTTCATGAAG+CGG | - | chr4_1:51633112-51633131 | Msa0554390:intron | 35.0% | |
| TTGGCCAATTTAATCATTGG+AGG | + | chr4_1:51633153-51633172 | None:intergenic | 35.0% | |
| CTGTTGGCCAATTTAATCAT+TGG | + | chr4_1:51633156-51633175 | None:intergenic | 35.0% | |
| TATGTTGGCCAAAAAATGTG+TGG | - | chr4_1:51633248-51633267 | Msa0554390:CDS | 35.0% | |
| !!! | TTCTCCATCCACACATTTTT+TGG | + | chr4_1:51633259-51633278 | None:intergenic | 35.0% |
| ! | CATGAATCCGTCGTCTATTT+TGG | - | chr4_1:51631292-51631311 | Msa0554390:CDS | 40.0% |
| GCATGAATATATGTCCAAGC+AGG | - | chr4_1:51631814-51631833 | Msa0554390:intron | 40.0% | |
| GAATATATGTCCAAGCAGGT+TGG | - | chr4_1:51631818-51631837 | Msa0554390:intron | 40.0% | |
| ! | AGGATGGACTCACTAAAGTA+TGG | - | chr4_1:51631899-51631918 | Msa0554390:intron | 40.0% |
| CTCACTAAAGTATGGTGAAG+TGG | - | chr4_1:51631907-51631926 | Msa0554390:intron | 40.0% | |
| AGTCCAACAAATACTCCCAA+CGG | + | chr4_1:51632118-51632137 | None:intergenic | 40.0% | |
| ! | ACTTTTCTCAAAGCAATGGG+TGG | - | chr4_1:51632220-51632239 | Msa0554390:intron | 40.0% |
| AGCATCTTGATCCGTTAGAA+TGG | + | chr4_1:51632260-51632279 | None:intergenic | 40.0% | |
| CACAATCCATGAAATGTCTC+CGG | + | chr4_1:51632313-51632332 | None:intergenic | 40.0% | |
| AATGGGCATGGACTTATGTT+CGG | - | chr4_1:51632533-51632552 | Msa0554390:intron | 40.0% | |
| AAAGAGCTGTCAATGGTAAG+CGG | - | chr4_1:51632668-51632687 | Msa0554390:intron | 40.0% | |
| GATATTCCTCGTATTCCTCT+TGG | + | chr4_1:51632813-51632832 | None:intergenic | 40.0% | |
| ! | AGACACTTGCATAAAGGTGT+TGG | - | chr4_1:51632834-51632853 | Msa0554390:intron | 40.0% |
| !! | TGCATAAAGGTGTTGGAAGA+AGG | - | chr4_1:51632841-51632860 | Msa0554390:intron | 40.0% |
| GACAGTTATGGGAAATCCTA+CGG | - | chr4_1:51632903-51632922 | Msa0554390:intron | 40.0% | |
| GGTTGGGAAGTAATCAAGAT+TGG | - | chr4_1:51633064-51633083 | Msa0554390:intron | 40.0% | |
| ACTGTACCGCTTCATGAAAT+GGG | + | chr4_1:51633121-51633140 | None:intergenic | 40.0% | |
| !! | ATGAGATTCTGAAGCTCTGT+TGG | + | chr4_1:51633172-51633191 | None:intergenic | 40.0% |
| GCTGGACTCTTCATAAACTT+TGG | + | chr4_1:51633214-51633233 | None:intergenic | 40.0% | |
| TTGGCCAAAAAATGTGTGGA+TGG | - | chr4_1:51633252-51633271 | Msa0554390:CDS | 40.0% | |
| AGAATCAAGTGGAATGGTTC+AGG | - | chr4_1:51633275-51633294 | Msa0554390:CDS | 40.0% | |
| TAAAGAGAAAGAAGCCAGCA+TGG | - | chr4_1:51633320-51633339 | Msa0554390:CDS | 40.0% | |
| ! | TATGCCTTTTGCCTTGACAA+CGG | + | chr4_1:51633349-51633368 | None:intergenic | 40.0% |
| ! | CATGAATCCGTCGTCTATTT+TGG | - | chr4_1:51631292-51631311 | Msa0554390:CDS | 40.0% |
| GCATGAATATATGTCCAAGC+AGG | - | chr4_1:51631814-51631833 | Msa0554390:intron | 40.0% | |
| GAATATATGTCCAAGCAGGT+TGG | - | chr4_1:51631818-51631837 | Msa0554390:intron | 40.0% | |
| ! | AGGATGGACTCACTAAAGTA+TGG | - | chr4_1:51631899-51631918 | Msa0554390:intron | 40.0% |
| CTCACTAAAGTATGGTGAAG+TGG | - | chr4_1:51631907-51631926 | Msa0554390:intron | 40.0% | |
| AGTCCAACAAATACTCCCAA+CGG | + | chr4_1:51632118-51632137 | None:intergenic | 40.0% | |
| ! | ACTTTTCTCAAAGCAATGGG+TGG | - | chr4_1:51632220-51632239 | Msa0554390:intron | 40.0% |
| AGCATCTTGATCCGTTAGAA+TGG | + | chr4_1:51632260-51632279 | None:intergenic | 40.0% | |
| CACAATCCATGAAATGTCTC+CGG | + | chr4_1:51632313-51632332 | None:intergenic | 40.0% | |
| AATGGGCATGGACTTATGTT+CGG | - | chr4_1:51632533-51632552 | Msa0554390:intron | 40.0% | |
| AAAGAGCTGTCAATGGTAAG+CGG | - | chr4_1:51632668-51632687 | Msa0554390:intron | 40.0% | |
| GATATTCCTCGTATTCCTCT+TGG | + | chr4_1:51632813-51632832 | None:intergenic | 40.0% | |
| ! | AGACACTTGCATAAAGGTGT+TGG | - | chr4_1:51632834-51632853 | Msa0554390:intron | 40.0% |
| !! | TGCATAAAGGTGTTGGAAGA+AGG | - | chr4_1:51632841-51632860 | Msa0554390:intron | 40.0% |
| GACAGTTATGGGAAATCCTA+CGG | - | chr4_1:51632903-51632922 | Msa0554390:intron | 40.0% | |
| GGTTGGGAAGTAATCAAGAT+TGG | - | chr4_1:51633064-51633083 | Msa0554390:intron | 40.0% | |
| ACTGTACCGCTTCATGAAAT+GGG | + | chr4_1:51633121-51633140 | None:intergenic | 40.0% | |
| !! | ATGAGATTCTGAAGCTCTGT+TGG | + | chr4_1:51633172-51633191 | None:intergenic | 40.0% |
| GCTGGACTCTTCATAAACTT+TGG | + | chr4_1:51633214-51633233 | None:intergenic | 40.0% | |
| TTGGCCAAAAAATGTGTGGA+TGG | - | chr4_1:51633252-51633271 | Msa0554390:CDS | 40.0% | |
| AGAATCAAGTGGAATGGTTC+AGG | - | chr4_1:51633275-51633294 | Msa0554390:CDS | 40.0% | |
| TAAAGAGAAAGAAGCCAGCA+TGG | - | chr4_1:51633320-51633339 | Msa0554390:CDS | 40.0% | |
| ! | TATGCCTTTTGCCTTGACAA+CGG | + | chr4_1:51633349-51633368 | None:intergenic | 40.0% |
| ATCCAAGCGAGGTTTGATGT+CGG | + | chr4_1:51631390-51631409 | None:intergenic | 45.0% | |
| ACAAAAGACGTCAACCGACT+GGG | - | chr4_1:51631570-51631589 | Msa0554390:CDS | 45.0% | |
| TCTACGGCAGAAACTAGAAC+CGG | - | chr4_1:51631596-51631615 | Msa0554390:intron | 45.0% | |
| ! | TATATGTCCAAGCAGGTTGG+TGG | - | chr4_1:51631821-51631840 | Msa0554390:intron | 45.0% |
| !! | ATATGTCCAAGCAGGTTGGT+GGG | - | chr4_1:51631822-51631841 | Msa0554390:intron | 45.0% |
| AAATAAGGGTTATCGGCCGT+TGG | - | chr4_1:51632099-51632118 | Msa0554390:intron | 45.0% | |
| AATAAGGGTTATCGGCCGTT+GGG | - | chr4_1:51632100-51632119 | Msa0554390:intron | 45.0% | |
| GTTATGCCGGAGACATTTCA+TGG | - | chr4_1:51632304-51632323 | Msa0554390:intron | 45.0% | |
| GTTCGGAAAACATTCACTGC+AGG | - | chr4_1:51632550-51632569 | Msa0554390:intron | 45.0% | |
| GGAATTCCAAGAGGAATACG+AGG | - | chr4_1:51632804-51632823 | Msa0554390:intron | 45.0% | |
| ACTAAAGCGATGGACAAGAG+AGG | - | chr4_1:51633038-51633057 | Msa0554390:intron | 45.0% | |
| CACTGTACCGCTTCATGAAA+TGG | + | chr4_1:51633122-51633141 | None:intergenic | 45.0% | |
| TGTGTGGATGGAGAATCAAG+TGG | - | chr4_1:51633264-51633283 | Msa0554390:CDS | 45.0% | |
| GGATGGAGAATCAAGTGGAA+TGG | - | chr4_1:51633269-51633288 | Msa0554390:CDS | 45.0% | |
| GTTCAGGTAACCGTATCACT+TGG | - | chr4_1:51633291-51633310 | Msa0554390:CDS | 45.0% | |
| GAAACCGTTGTCAAGGCAAA+AGG | - | chr4_1:51633342-51633361 | Msa0554390:intron | 45.0% | |
| ATCCAAGCGAGGTTTGATGT+CGG | + | chr4_1:51631390-51631409 | None:intergenic | 45.0% | |
| ACAAAAGACGTCAACCGACT+GGG | - | chr4_1:51631570-51631589 | Msa0554390:CDS | 45.0% | |
| TCTACGGCAGAAACTAGAAC+CGG | - | chr4_1:51631596-51631615 | Msa0554390:intron | 45.0% | |
| ! | TATATGTCCAAGCAGGTTGG+TGG | - | chr4_1:51631821-51631840 | Msa0554390:intron | 45.0% |
| !! | ATATGTCCAAGCAGGTTGGT+GGG | - | chr4_1:51631822-51631841 | Msa0554390:intron | 45.0% |
| AAATAAGGGTTATCGGCCGT+TGG | - | chr4_1:51632099-51632118 | Msa0554390:intron | 45.0% | |
| AATAAGGGTTATCGGCCGTT+GGG | - | chr4_1:51632100-51632119 | Msa0554390:intron | 45.0% | |
| GTTATGCCGGAGACATTTCA+TGG | - | chr4_1:51632304-51632323 | Msa0554390:intron | 45.0% | |
| GTTCGGAAAACATTCACTGC+AGG | - | chr4_1:51632550-51632569 | Msa0554390:intron | 45.0% | |
| GGAATTCCAAGAGGAATACG+AGG | - | chr4_1:51632804-51632823 | Msa0554390:intron | 45.0% | |
| ACTAAAGCGATGGACAAGAG+AGG | - | chr4_1:51633038-51633057 | Msa0554390:intron | 45.0% | |
| CACTGTACCGCTTCATGAAA+TGG | + | chr4_1:51633122-51633141 | None:intergenic | 45.0% | |
| TGTGTGGATGGAGAATCAAG+TGG | - | chr4_1:51633264-51633283 | Msa0554390:CDS | 45.0% | |
| GGATGGAGAATCAAGTGGAA+TGG | - | chr4_1:51633269-51633288 | Msa0554390:CDS | 45.0% | |
| GTTCAGGTAACCGTATCACT+TGG | - | chr4_1:51633291-51633310 | Msa0554390:CDS | 45.0% | |
| GAAACCGTTGTCAAGGCAAA+AGG | - | chr4_1:51633342-51633361 | Msa0554390:intron | 45.0% | |
| GACAAAAGACGTCAACCGAC+TGG | - | chr4_1:51631569-51631588 | Msa0554390:CDS | 50.0% | |
| CAAAAGACGTCAACCGACTG+GGG | - | chr4_1:51631571-51631590 | Msa0554390:CDS | 50.0% | |
| CTACGGCAGAAACTAGAACC+GGG | - | chr4_1:51631597-51631616 | Msa0554390:intron | 50.0% | |
| AACCGGGTGTAATGCACGTA+TGG | - | chr4_1:51631613-51631632 | Msa0554390:intron | 50.0% | |
| ACCGGGTGTAATGCACGTAT+GGG | - | chr4_1:51631614-51631633 | Msa0554390:intron | 50.0% | |
| ACACAACCACCTTCTTCAGC+CGG | - | chr4_1:51631691-51631710 | Msa0554390:intron | 50.0% | |
| CATACTCTTCCGGCTGAAGA+AGG | + | chr4_1:51631703-51631722 | None:intergenic | 50.0% | |
| CTCTCATCGTCGCATATCTG+AGG | - | chr4_1:51631736-51631755 | Msa0554390:intron | 50.0% | |
| ! | GTTGGTGGGATAGAGATGGT+TGG | - | chr4_1:51631836-51631855 | Msa0554390:intron | 50.0% |
| AACGGATCAAGATGCTGCGA+TGG | - | chr4_1:51632264-51632283 | Msa0554390:intron | 50.0% | |
| TCAAGATGCTGCGATGGCAA+AGG | - | chr4_1:51632270-51632289 | Msa0554390:intron | 50.0% | |
| CAAGATGCTGCGATGGCAAA+GGG | - | chr4_1:51632271-51632290 | Msa0554390:intron | 50.0% | |
| GGGTGTAAACATTTCCGGCT+TGG | + | chr4_1:51632771-51632790 | None:intergenic | 50.0% | |
| ATGGACAAGAGAGGCAAGGT+TGG | - | chr4_1:51633047-51633066 | Msa0554390:intron | 50.0% | |
| TGGACAAGAGAGGCAAGGTT+GGG | - | chr4_1:51633048-51633067 | Msa0554390:intron | 50.0% | |
| CTTGACAACGGTTTCCATGC+TGG | + | chr4_1:51633337-51633356 | None:intergenic | 50.0% | |
| CAGCATGGAAACCGTTGTCA+AGG | - | chr4_1:51633335-51633354 | Msa0554390:CDS | 50.0% | |
| GACAAAAGACGTCAACCGAC+TGG | - | chr4_1:51631569-51631588 | Msa0554390:CDS | 50.0% | |
| CAAAAGACGTCAACCGACTG+GGG | - | chr4_1:51631571-51631590 | Msa0554390:CDS | 50.0% | |
| CTACGGCAGAAACTAGAACC+GGG | - | chr4_1:51631597-51631616 | Msa0554390:intron | 50.0% | |
| AACCGGGTGTAATGCACGTA+TGG | - | chr4_1:51631613-51631632 | Msa0554390:intron | 50.0% | |
| ACCGGGTGTAATGCACGTAT+GGG | - | chr4_1:51631614-51631633 | Msa0554390:intron | 50.0% | |
| ACACAACCACCTTCTTCAGC+CGG | - | chr4_1:51631691-51631710 | Msa0554390:intron | 50.0% | |
| CATACTCTTCCGGCTGAAGA+AGG | + | chr4_1:51631703-51631722 | None:intergenic | 50.0% | |
| CTCTCATCGTCGCATATCTG+AGG | - | chr4_1:51631736-51631755 | Msa0554390:intron | 50.0% | |
| ! | GTTGGTGGGATAGAGATGGT+TGG | - | chr4_1:51631836-51631855 | Msa0554390:intron | 50.0% |
| AACGGATCAAGATGCTGCGA+TGG | - | chr4_1:51632264-51632283 | Msa0554390:intron | 50.0% | |
| TCAAGATGCTGCGATGGCAA+AGG | - | chr4_1:51632270-51632289 | Msa0554390:intron | 50.0% | |
| CAAGATGCTGCGATGGCAAA+GGG | - | chr4_1:51632271-51632290 | Msa0554390:intron | 50.0% | |
| GGGTGTAAACATTTCCGGCT+TGG | + | chr4_1:51632771-51632790 | None:intergenic | 50.0% | |
| ATGGACAAGAGAGGCAAGGT+TGG | - | chr4_1:51633047-51633066 | Msa0554390:intron | 50.0% | |
| TGGACAAGAGAGGCAAGGTT+GGG | - | chr4_1:51633048-51633067 | Msa0554390:intron | 50.0% | |
| CTTGACAACGGTTTCCATGC+TGG | + | chr4_1:51633337-51633356 | None:intergenic | 50.0% | |
| CAGCATGGAAACCGTTGTCA+AGG | - | chr4_1:51633335-51633354 | Msa0554390:CDS | 50.0% | |
| TGCCGACATCAAACCTCGCT+TGG | - | chr4_1:51631385-51631404 | Msa0554390:CDS | 55.0% | |
| TCAACCGACTGGGGAGTCTA+CGG | - | chr4_1:51631580-51631599 | Msa0554390:CDS | 55.0% | |
| GCCCATACGTGCATTACACC+CGG | + | chr4_1:51631618-51631637 | None:intergenic | 55.0% | |
| ACTCTTCCGGCTGAAGAAGG+TGG | + | chr4_1:51631700-51631719 | None:intergenic | 55.0% | |
| CTCTATCCCACCAACCTGCT+TGG | + | chr4_1:51631831-51631850 | None:intergenic | 55.0% | |
| !! | GCAGGTTGGTGGGATAGAGA+TGG | - | chr4_1:51631832-51631851 | Msa0554390:intron | 55.0% |
| !! | CGGCCGTTGGGAGTATTTGT+TGG | - | chr4_1:51632112-51632131 | Msa0554390:intron | 55.0% |
| AGCGATGGACAAGAGAGGCA+AGG | - | chr4_1:51633043-51633062 | Msa0554390:intron | 55.0% | |
| TGCCGACATCAAACCTCGCT+TGG | - | chr4_1:51631385-51631404 | Msa0554390:CDS | 55.0% | |
| TCAACCGACTGGGGAGTCTA+CGG | - | chr4_1:51631580-51631599 | Msa0554390:CDS | 55.0% | |
| GCCCATACGTGCATTACACC+CGG | + | chr4_1:51631618-51631637 | None:intergenic | 55.0% | |
| ACTCTTCCGGCTGAAGAAGG+TGG | + | chr4_1:51631700-51631719 | None:intergenic | 55.0% | |
| CTCTATCCCACCAACCTGCT+TGG | + | chr4_1:51631831-51631850 | None:intergenic | 55.0% | |
| !! | GCAGGTTGGTGGGATAGAGA+TGG | - | chr4_1:51631832-51631851 | Msa0554390:intron | 55.0% |
| !! | CGGCCGTTGGGAGTATTTGT+TGG | - | chr4_1:51632112-51632131 | Msa0554390:intron | 55.0% |
| AGCGATGGACAAGAGAGGCA+AGG | - | chr4_1:51633043-51633062 | Msa0554390:intron | 55.0% | |
| TCTGCCGTAGACTCCCCAGT+CGG | + | chr4_1:51631587-51631606 | None:intergenic | 60.0% | |
| GCTCGAATGCTCGTCCAAGC+CGG | - | chr4_1:51632754-51632773 | Msa0554390:intron | 60.0% | |
| TCTGCCGTAGACTCCCCAGT+CGG | + | chr4_1:51631587-51631606 | None:intergenic | 60.0% | |
| GCTCGAATGCTCGTCCAAGC+CGG | - | chr4_1:51632754-51632773 | Msa0554390:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 51631288 | 51633494 | 51631288 | ID=Msa0554390;Name=Msa0554390 |
| chr4_1 | mRNA | 51631288 | 51633494 | 51631288 | ID=Msa0554390-mRNA-1;Parent=Msa0554390;Name=Msa0554390-mRNA-1;_AED=0.38;_eAED=0.41;_QI=5|0|0|1|0.33|0|4|0|183 |
| chr4_1 | exon | 51633445 | 51633494 | 51633445 | ID=Msa0554390-mRNA-1:exon:14868;Parent=Msa0554390-mRNA-1 |
| chr4_1 | exon | 51633164 | 51633354 | 51633164 | ID=Msa0554390-mRNA-1:exon:14867;Parent=Msa0554390-mRNA-1 |
| chr4_1 | exon | 51631492 | 51631606 | 51631492 | ID=Msa0554390-mRNA-1:exon:14866;Parent=Msa0554390-mRNA-1 |
| chr4_1 | exon | 51631288 | 51631485 | 51631288 | ID=Msa0554390-mRNA-1:exon:14865;Parent=Msa0554390-mRNA-1 |
| chr4_1 | five_prime_UTR | 51633490 | 51633494 | 51633490 | ID=Msa0554390-mRNA-1:five_prime_utr;Parent=Msa0554390-mRNA-1 |
| chr4_1 | CDS | 51633445 | 51633489 | 51633445 | ID=Msa0554390-mRNA-1:cds;Parent=Msa0554390-mRNA-1 |
| chr4_1 | CDS | 51633164 | 51633354 | 51633164 | ID=Msa0554390-mRNA-1:cds;Parent=Msa0554390-mRNA-1 |
| chr4_1 | CDS | 51631492 | 51631606 | 51631492 | ID=Msa0554390-mRNA-1:cds;Parent=Msa0554390-mRNA-1 |
| chr4_1 | CDS | 51631288 | 51631485 | 51631288 | ID=Msa0554390-mRNA-1:cds;Parent=Msa0554390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
