AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0557160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0557160 MtrunA17_Chr4g0046231 83.951 324 39 2 28 351 1 311 0.0 516
Msa0557160 MtrunA17_Chr4g0046231 58.104 327 65 7 383 639 1 325 5.26e-94 293
Msa0557160 MtrunA17_Chr7g0223471 59.104 357 129 5 4 351 42 390 6.70e-130 388
Msa0557160 MtrunA17_Chr7g0223471 48.267 375 104 6 351 639 34 404 5.49e-96 300
Msa0557160 MtrunA17_Chr4g0046241 79.167 168 35 0 132 299 2 169 1.49e-86 267
Msa0557160 MtrunA17_Chr4g0046241 67.647 136 10 3 470 573 2 135 1.58e-45 159
Msa0557160 MtrunA17_Chr2g0283141 36.216 370 151 10 350 639 41 405 2.61e-47 172
Msa0557160 MtrunA17_Chr2g0283141 38.251 366 186 12 3 351 49 391 8.82e-47 171
Msa0557160 MtrunA17_Chr4g0046251 89.706 68 7 0 572 639 17 84 4.48e-38 135
Msa0557160 MtrunA17_Chr4g0046251 54.545 55 25 0 297 351 16 70 7.26e-14 67.8
Msa0557160 MtrunA17_Chr6g0460691 70.370 54 16 0 7 60 30 83 2.10e-20 92.4
Msa0557160 MtrunA17_Chr6g0460691 60.000 60 24 0 356 415 24 83 9.24e-19 87.4
Msa0557160 MtrunA17_Chr7g0254251 69.231 52 16 0 7 58 26 77 2.05e-18 85.9
Msa0557160 MtrunA17_Chr7g0254251 60.345 58 23 0 356 413 20 77 8.64e-17 80.9
Msa0557160 MtrunA17_Chr4g0043891 45.588 68 37 0 2 69 1 68 4.25e-16 78.6
Msa0557160 MtrunA17_Chr4g0043891 45.902 61 33 0 359 419 3 63 4.79e-13 69.7
Msa0557160 MtrunA17_Chr8g0392991 49.180 61 31 0 9 69 96 156 3.75e-15 77.4
Msa0557160 MtrunA17_Chr8g0392991 41.250 80 41 2 364 441 96 171 1.95e-12 69.3
Msa0557160 MtrunA17_Chr5g0436661 44.262 61 34 0 9 69 33 93 1.40e-14 72.4
Msa0557160 MtrunA17_Chr5g0436661 31.933 119 61 3 364 462 33 151 1.87e-11 63.5
Msa0557160 MtrunA17_Chr5g0405351 41.975 81 45 2 9 88 30 109 7.74e-14 72.8
Msa0557160 MtrunA17_Chr4g0031341 30.233 172 88 3 9 150 25 194 1.17e-13 71.6
Msa0557160 MtrunA17_Chr1g0153171 49.180 61 31 0 9 69 90 150 3.55e-13 69.7
Msa0557160 MtrunA17_Chr3g0144021 33.010 103 62 1 7 109 80 175 1.37e-12 67.4
Msa0557160 MtrunA17_Chr3g0144021 26.277 137 87 4 288 422 16 140 2.92e-11 63.5
Msa0557160 MtrunA17_Chr7g0238431 40.299 67 40 0 2 68 1 67 2.18e-12 66.6
Msa0557160 MtrunA17_Chr1g0212511 40.323 62 37 0 361 422 82 143 1.48e-11 65.5
Msa0557160 MtrunA17_Chr1g0212511 41.270 63 37 0 6 68 82 144 2.26e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0557160 AT5G45980.1 32.423 293 174 8 356 639 47 324 5.71e-33 129
Msa0557160 AT5G45980.1 60.000 85 31 1 4 85 50 134 1.29e-26 111
Msa0557160 AT2G33880.1 65.714 70 24 0 352 421 43 112 4.51e-26 110
Msa0557160 AT2G33880.1 50.847 59 29 0 581 639 319 377 1.87e-12 69.7
Msa0557160 AT2G33880.2 65.714 70 24 0 352 421 43 112 5.15e-26 110
Msa0557160 AT2G33880.2 50.847 59 29 0 581 639 319 377 2.34e-12 69.7
Msa0557160 AT5G17810.3 68.519 54 17 0 7 60 19 72 1.26e-19 89.7
Msa0557160 AT5G17810.3 62.963 54 20 0 362 415 19 72 2.98e-17 82.8
Msa0557160 AT5G17810.1 68.519 54 17 0 7 60 19 72 1.38e-19 89.7
Msa0557160 AT5G17810.1 62.963 54 20 0 362 415 19 72 3.21e-17 82.8
Msa0557160 AT5G17810.2 68.519 54 17 0 7 60 19 72 1.38e-19 89.7
Msa0557160 AT5G17810.2 62.963 54 20 0 362 415 19 72 3.21e-17 82.8
Msa0557160 AT3G03660.1 66.667 54 18 0 7 60 31 84 1.87e-19 89.4
Msa0557160 AT3G03660.1 61.111 54 21 0 362 415 31 84 6.43e-17 81.6
Msa0557160 AT3G03660.2 66.667 54 18 0 7 60 31 84 2.94e-19 89.4
Msa0557160 AT3G03660.2 61.111 54 21 0 362 415 31 84 1.02e-16 81.6
Msa0557160 AT3G03660.4 66.667 54 18 0 7 60 31 84 4.65e-19 88.6
Msa0557160 AT3G03660.4 61.111 54 21 0 362 415 31 84 1.63e-16 81.3
Msa0557160 AT3G03660.3 66.667 54 18 0 7 60 31 84 6.46e-19 89.0
Msa0557160 AT3G03660.3 61.111 54 21 0 362 415 31 84 2.26e-16 81.3
Msa0557160 AT3G18010.1 43.421 76 36 1 1 69 61 136 1.12e-14 76.3
Msa0557160 AT3G18010.1 46.429 56 30 0 364 419 76 131 1.35e-11 67.0
Msa0557160 AT5G05770.1 43.333 60 34 0 9 68 29 88 8.79e-14 68.9
Msa0557160 AT5G05770.1 36.000 75 41 1 364 431 29 103 2.44e-11 62.0
Msa0557160 AT3G11260.1 44.262 61 34 0 9 69 24 84 1.16e-13 70.1
Msa0557160 AT1G46480.2 49.180 61 31 0 9 69 90 150 1.25e-13 70.5
Msa0557160 AT2G17950.1 50.000 62 30 1 9 69 38 99 2.96e-13 71.2
Msa0557160 AT2G17950.1 41.250 80 45 2 364 441 38 117 1.10e-11 66.6
Msa0557160 AT1G46480.1 49.180 61 31 0 9 69 90 150 5.31e-13 69.7
Msa0557160 AT5G59340.1 25.556 180 124 4 9 182 14 189 8.21e-13 69.3
Msa0557160 AT5G59340.1 41.791 67 36 1 364 430 14 77 5.09e-11 63.9
Msa0557160 AT2G01500.1 49.091 55 28 0 9 63 61 115 1.17e-12 69.3
Msa0557160 AT2G28610.1 41.791 67 39 0 2 68 1 67 2.35e-12 67.8
Msa0557160 AT2G28610.1 43.548 62 35 0 358 419 2 63 5.58e-11 63.5
Msa0557160 AT4G35550.1 42.857 63 36 0 7 69 97 159 8.10e-12 66.6
Msa0557160 AT1G20700.2 37.662 77 45 1 362 438 31 104 8.28e-12 63.9
Msa0557160 AT1G20700.2 41.270 63 37 0 7 69 31 93 1.76e-11 63.2
Msa0557160 AT1G20700.1 34.066 91 57 1 348 438 79 166 1.22e-11 65.1
Msa0557160 AT1G20700.1 41.270 63 37 0 7 69 93 155 2.89e-11 63.9
Msa0557160 AT1G20700.3 34.066 91 57 1 348 438 79 166 1.47e-11 64.7
Msa0557160 AT1G20700.3 41.270 63 37 0 7 69 93 155 3.14e-11 63.5

Find 176 sgRNAs with CRISPR-Local

Find 865 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGAACAATTAGAAGAATT+TGG 0.130042 4_1:+55471857 Msa0557160:CDS
CGTGGACAATTAGAAGAATT+TGG 0.151147 4_1:+55479775 Msa0557160:CDS
CAAGACCCGCAATTTAATTT+TGG 0.177107 4_1:+55472493 Msa0557160:CDS
TTAGAAGAATTTGGGAAAAT+TGG 0.179693 4_1:+55471866 Msa0557160:CDS
CAAGACCCACAACTTAATTT+TGG 0.181827 4_1:+55480366 Msa0557160:CDS
TGTTTCCTGTTTCTTGTTAT+AGG 0.203606 4_1:-55479869 None:intergenic
GGTAGGGATTGACTCATATT+TGG 0.224718 4_1:-55480201 None:intergenic
CAACCGGGAAAGAGGAAAAT+TGG 0.227401 4_1:-55472231 None:intergenic
TCATCTTCCTCTAACAATAT+TGG 0.243443 4_1:+55479958 Msa0557160:CDS
GTTTCCTGTTTCTTGTTATA+GGG 0.246182 4_1:-55479868 None:intergenic
AAAGGATTCACGAACGTTAA+AGG 0.277504 4_1:-55472882 None:intergenic
AATAAGTATCATCTTGGTTT+TGG 0.279397 4_1:-55472168 None:intergenic
ATGCGGATTTGCTCAGGCTT+TGG 0.283372 4_1:-55471773 None:intergenic
ATGAACAATGAAAATGAAAA+TGG 0.285973 4_1:+55472394 Msa0557160:CDS
CCATGGGGCTGATTATTTCC+TGG 0.287811 4_1:+55481058 Msa0557160:CDS
CACTCTCCCATCATTAATAT+TGG 0.292661 4_1:-55472113 None:intergenic
GATAAGTATCACCTTGGTTT+TGG 0.292982 4_1:-55480041 None:intergenic
CATTTCCATTTCCATTTCCA+TGG 0.306135 4_1:-55480266 None:intergenic
CACCGTCCCATCATTAATAT+TGG 0.306396 4_1:-55479986 None:intergenic
TTTAACGTTCGTAAATTCTT+TGG 0.306854 4_1:+55480957 Msa0557160:CDS
GCCTGAGCAAATCCGCATTC+TGG 0.308743 4_1:+55471778 Msa0557160:CDS
TGCGGATTTGCTCAGGCTTT+GGG 0.308960 4_1:-55471772 None:intergenic
GAAGTTGATCATCGGTAAAA+AGG 0.313912 4_1:-55472609 None:intergenic
AGAGAGATTGCAGGTGAATT+AGG 0.315667 4_1:-55480015 None:intergenic
TGCGGATTTGCTCAGGCTTT+GGG 0.317008 4_1:-55479690 None:intergenic
ATGCGGATTTGCTCAGGCTT+TGG 0.318582 4_1:-55479691 None:intergenic
TCAGGCTTTGGGATCCATCT+TGG 0.322557 4_1:-55479679 None:intergenic
TCAGGCTTTGGGTTCCATCT+TGG 0.322968 4_1:-55471761 None:intergenic
TTTGGGTTCCATCTTGGCCT+TGG 0.327019 4_1:-55471755 None:intergenic
TTTGGGATCCATCTTGGCCT+TGG 0.327019 4_1:-55479673 None:intergenic
ATCACAATATCTAACAATAT+TGG 0.329123 4_1:+55472085 Msa0557160:CDS
TTTCATTGGGAGAGGCTCTT+TGG 0.330296 4_1:-55472063 None:intergenic
GGAGAGATTGTGGATGAATT+AGG 0.338412 4_1:-55472142 None:intergenic
AAGAATTTACGAACGTTAAA+CGG 0.341072 4_1:-55480954 None:intergenic
GGTGGTGGTGGTGGGATTTG+TGG 0.341213 4_1:-55472010 None:intergenic
GTGGTGGTGGTGGGATTTGT+GGG 0.343259 4_1:-55472009 None:intergenic
GTTAGATATTGTGATTTCAT+TGG 0.354236 4_1:-55472077 None:intergenic
GGTGAGGGTTCAATCATATT+CGG 0.354951 4_1:-55472328 None:intergenic
GGAGATTCCAATATTGTTAG+AGG 0.358018 4_1:-55479965 None:intergenic
ATTTGTGGGAGAGAGTTATT+AGG 0.358733 4_1:-55471995 None:intergenic
GTGAACAATTAGAAGAATTT+GGG 0.359582 4_1:+55471858 Msa0557160:CDS
TTCCATCTTGGCCTTGGTCC+AGG 0.361114 4_1:-55471749 None:intergenic
CTTGTTATAGGGTACTTTGT+TGG 0.367143 4_1:-55479857 None:intergenic
CTCGAAGCCATCTATAACTC+AGG 0.368031 4_1:+55479715 Msa0557160:CDS
AATGTTGATCTGCTTAATTA+TGG 0.368098 4_1:+55480231 Msa0557160:CDS
GATGGATTAGGTGGTGGTGG+TGG 0.376558 4_1:-55472019 None:intergenic
AGAGGCTCTTTGGTGATTAG+AGG 0.377467 4_1:-55472053 None:intergenic
CCCTCAACTCTCTCCACCAT+GGG 0.377481 4_1:+55481042 Msa0557160:CDS
AATTAAATTGCGGGTCTTGT+TGG 0.379122 4_1:-55472489 None:intergenic
AACCGGGAAAGAGGAAAATT+GGG 0.379966 4_1:-55472230 None:intergenic
GTGGACAATTAGAAGAATTT+GGG 0.383795 4_1:+55479776 Msa0557160:CDS
CGTCATCCCTGAGTTATAGA+TGG 0.384216 4_1:-55479722 None:intergenic
CTGGAAGCAATCTACAACTC+AGG 0.386585 4_1:+55471797 Msa0557160:CDS
GAAGATGATGAAGATGGATT+AGG 0.391757 4_1:-55472031 None:intergenic
CCCCATTCATCTGTTAGAAC+CGG 0.392260 4_1:-55472941 None:intergenic
CCCGGTTCTAACAGATGAAT+GGG 0.395103 4_1:+55472940 Msa0557160:CDS
TGACACCAAAATTAAATTGC+GGG 0.395460 4_1:-55472498 None:intergenic
AGTGGTGGTGTGGTGATTTG+TGG 0.396224 4_1:-55479922 None:intergenic
TTAGATATTGTGATTTCATT+GGG 0.400328 4_1:-55472076 None:intergenic
CATGGAAATGGAAATGGAAA+TGG 0.401685 4_1:+55480267 Msa0557160:CDS
GATAATGAAGAAAGAAATCC+TGG 0.405944 4_1:+55471731 Msa0557160:intron
AACATCATGACCCATGGAAA+TGG 0.406297 4_1:+55480255 Msa0557160:CDS
ATGACCCATGGAAATGGAAA+TGG 0.413791 4_1:+55480261 Msa0557160:CDS
ATTTGTGGGAGAGAGCTATC+TGG 0.415068 4_1:-55479907 None:intergenic
TTAGGAGCTGGATCTGCAAT+TGG 0.417412 4_1:-55471977 None:intergenic
AAAGAGGAAAATTGGGGTTT+AGG 0.417495 4_1:-55472223 None:intergenic
TTTACCGATGATCAACTTCA+AGG 0.420455 4_1:+55472613 Msa0557160:CDS
ATCCATCTTGGCCTTGGTCC+AGG 0.421536 4_1:-55479667 None:intergenic
TCCAGAATGCGGATTTGCTC+AGG 0.421812 4_1:-55471779 None:intergenic
CCCCACTCATCAGTTAGAAC+CGG 0.422831 4_1:-55481014 None:intergenic
TCATTGATATGATTCTCAAC+CGG 0.427156 4_1:-55472247 None:intergenic
GGAATCTCCAATATTAATGA+TGG 0.434654 4_1:+55479979 Msa0557160:CDS
TTTAACGTTCGTGAATCCTT+TGG 0.434959 4_1:+55472884 Msa0557160:CDS
GGAATCTCCAATATTAATGA+TGG 0.437319 4_1:+55472106 Msa0557160:CDS
AATTAAGTTGTGGGTCTTGT+TGG 0.440039 4_1:-55480362 None:intergenic
GTGAGGGTTCAATCATATTC+GGG 0.442014 4_1:-55472327 None:intergenic
AAGGATTCACGAACGTTAAA+GGG 0.443421 4_1:-55472881 None:intergenic
ATCTTCTTGATTTCATCTAC+AGG 0.443482 4_1:-55471833 None:intergenic
TCGAGAATGCGGATTTGCTC+AGG 0.443909 4_1:-55479697 None:intergenic
GTGGTGGTGTGGTGATTTGT+GGG 0.445822 4_1:-55479921 None:intergenic
AAAAGGAATGGAATATCAAC+AGG 0.453783 4_1:-55472592 None:intergenic
CCTCACACCCTCACTGGAAC+CGG 0.457199 4_1:+55480063 Msa0557160:CDS
GATGATGAAGAAAGAACTCC+TGG 0.460723 4_1:+55479649 Msa0557160:CDS
ACTTGACTCCTCCGGTGTCC+CGG 0.468788 4_1:+55480995 Msa0557160:CDS
ATGGATTAGGTGGTGGTGGT+GGG 0.472541 4_1:-55472018 None:intergenic
AGTACCCTATAACAAGAAAC+AGG 0.472976 4_1:+55479864 Msa0557160:CDS
ATGTCAATGGCCGGAGGTAG+AGG 0.473475 4_1:-55472562 None:intergenic
TGTGAGAATAAGTATCATCT+TGG 0.474305 4_1:-55472174 None:intergenic
GGGTTTAGGTAGTTGTAGAT+CGG 0.478630 4_1:-55472209 None:intergenic
CCCCGGTTCTAACAGATGAA+TGG 0.478666 4_1:+55472939 Msa0557160:CDS
TTGTAGATCGGTTTCAGCTA+CGG 0.487248 4_1:-55472197 None:intergenic
CATTGATATGATTCTCAACC+GGG 0.490183 4_1:-55472246 None:intergenic
CCCATGGTGGAGAGAGTTGA+GGG 0.493625 4_1:-55481042 None:intergenic
ACTTATCCTCACACCCTCAC+TGG 0.496673 4_1:+55480057 Msa0557160:CDS
CCCATTCATCTGTTAGAACC+GGG 0.497169 4_1:-55472940 None:intergenic
TATTGTGATTTCATTGGGAG+AGG 0.498415 4_1:-55472071 None:intergenic
ATTTCCATTTCCATTTCCAT+GGG 0.498488 4_1:-55480265 None:intergenic
CTCCTGGACCAAGGCCAAGA+TGG 0.498721 4_1:+55479665 Msa0557160:CDS
CCCGGTTCTAACTGATGAGT+GGG 0.500975 4_1:+55481013 Msa0557160:CDS
GAAGATGGATTAGGTGGTGG+TGG 0.501572 4_1:-55472022 None:intergenic
GTTCGTAAATTCTTTGGCGA+TGG 0.502140 4_1:+55480963 Msa0557160:CDS
AAGACGCTGGAATCACTAAT+CGG 0.504502 4_1:-55479799 None:intergenic
ATGATTCTCAACCGGGAAAG+AGG 0.506437 4_1:-55472239 None:intergenic
GTTGAGAATCATATCAATGA+AGG 0.513388 4_1:+55472250 Msa0557160:CDS
GGGAGAGAGTTATTAGGAGC+TGG 0.513692 4_1:-55471989 None:intergenic
ACCCTCAACTCTCTCCACCA+TGG 0.514025 4_1:+55481041 Msa0557160:CDS
ACGATGGTACAGCAAAATGT+AGG 0.522895 4_1:+55480892 Msa0557160:CDS
TGACACCAAAATTAAGTTGT+GGG 0.525012 4_1:-55480371 None:intergenic
ATCCTGGACCAAGGCCAAGA+TGG 0.528279 4_1:+55471747 Msa0557160:CDS
AACAGGTGCACTCATGTCAA+TGG 0.531199 4_1:-55472575 None:intergenic
GTTAACCTCGATTACTTCGT+TGG 0.544175 4_1:-55472852 None:intergenic
TTGTAGACCGGTTCCAGTGA+GGG 0.546990 4_1:-55480070 None:intergenic
GGTACATTCGAAGTTAATGC+AGG 0.554719 4_1:+55480930 Msa0557160:CDS
TTCTTGATTTCATCTACAGG+TGG 0.556034 4_1:-55471830 None:intergenic
ATGACACCAAAATTAAGTTG+TGG 0.556361 4_1:-55480372 None:intergenic
GTTTGACTCCTTCTGTACCC+CGG 0.561060 4_1:+55472922 Msa0557160:CDS
TTAGAGGAAGATGATGAAGA+TGG 0.564984 4_1:-55472037 None:intergenic
CTCCAATATTAATGATGGGA+CGG 0.566336 4_1:+55479984 Msa0557160:CDS
TTGAGAATCATATCAATGAA+GGG 0.567167 4_1:+55472251 Msa0557160:CDS
ATCAGTTAGAACCGGGACAC+CGG 0.568997 4_1:-55481006 None:intergenic
TGTTAGAACCGGGGTACAGA+AGG 0.573461 4_1:-55472930 None:intergenic
GAATCTCCAATATTAATGAT+GGG 0.575519 4_1:+55472107 Msa0557160:CDS
GAATCTCCAATATTAATGAT+GGG 0.575519 4_1:+55479980 Msa0557160:CDS
CGATGGTACAGCAAAATGTA+GGG 0.576909 4_1:+55480893 Msa0557160:CDS
GCAGTTCTACTTGACTCCTC+CGG 0.578536 4_1:+55480987 Msa0557160:CDS
TCCCGGTTCTAACTGATGAG+TGG 0.581638 4_1:+55481012 Msa0557160:CDS
TTGAAACCAATAAAAGACGC+TGG 0.582551 4_1:-55479812 None:intergenic
TGATCTTGCTCCTCTACCTC+CGG 0.584790 4_1:+55472552 Msa0557160:CDS
GGTGCACTCATGTCAATGGC+CGG 0.585287 4_1:-55472571 None:intergenic
CCGGTTCCAGTGAGGGTGTG+AGG 0.585988 4_1:-55480063 None:intergenic
GTGACACCAAAATTAAATTG+CGG 0.589142 4_1:-55472499 None:intergenic
TGGAAGCAATCTACAACTCA+GGG 0.590445 4_1:+55471798 Msa0557160:CDS
TATGGTAACATCATGACCCA+TGG 0.593988 4_1:+55480249 Msa0557160:CDS
ATGTTATCATAATTAAGCAC+AGG 0.594226 4_1:-55472370 None:intergenic
TTATCAAGAGAATGTTCAAG+AGG 0.596808 4_1:+55472441 Msa0557160:CDS
CCCACTCATCAGTTAGAACC+GGG 0.597316 4_1:-55481013 None:intergenic
TTTCAAAACCGCAAGTCCAA+AGG 0.599228 4_1:+55471911 Msa0557160:CDS
TTATCAAGAGAATATTCAAG+AGG 0.601533 4_1:+55480314 Msa0557160:CDS
CCCCATGGTGGAGAGAGTTG+AGG 0.603919 4_1:-55481043 None:intergenic
TGTAGATTGCTTCCAGAATG+CGG 0.605667 4_1:-55471790 None:intergenic
GAAGTAATCGAGGTTAACGC+AGG 0.607642 4_1:+55472857 Msa0557160:CDS
TACTGCCAACGAAGTAATCG+AGG 0.608047 4_1:+55472847 Msa0557160:CDS
ATTACCTTGAAGTTGATCAT+CGG 0.608733 4_1:-55472617 None:intergenic
TCGAAGCCATCTATAACTCA+GGG 0.610436 4_1:+55479716 Msa0557160:CDS
CAGAACTACTCTATTACCAA+AGG 0.610968 4_1:-55472900 None:intergenic
TATAGATGGCTTCGAGAATG+CGG 0.617346 4_1:-55479708 None:intergenic
ACCGGGAAAGAGGAAAATTG+GGG 0.619020 4_1:-55472229 None:intergenic
TGTAGGGTGATTACTATCAA+CGG 0.630138 4_1:+55480909 Msa0557160:CDS
TGTGAGGATAAGTATCACCT+TGG 0.630360 4_1:-55480047 None:intergenic
AATGACATGACAACACTAGA+GGG 0.631034 4_1:+55472283 Msa0557160:CDS
GGAAATAATCAGCCCCATGG+TGG 0.634153 4_1:-55481055 None:intergenic
GTTGTAGACCGGTTCCAGTG+AGG 0.637143 4_1:-55480071 None:intergenic
TATTAATGATGGGACGGTGA+TGG 0.642433 4_1:+55479990 Msa0557160:CDS
GATGATGAAGATGGATTAGG+TGG 0.643509 4_1:-55472028 None:intergenic
ATCTCTCTGAACCAAAACCA+AGG 0.643948 4_1:+55480030 Msa0557160:CDS
AAGAAAGAACTCCTGGACCA+AGG 0.644218 4_1:+55479656 Msa0557160:CDS
TGAGAATCATATCAATGAAG+GGG 0.645242 4_1:+55472252 Msa0557160:CDS
TAATGACATGACAACACTAG+AGG 0.647700 4_1:+55472282 Msa0557160:CDS
GATGAAGATGGATTAGGTGG+TGG 0.649565 4_1:-55472025 None:intergenic
CCTCAACTCTCTCCACCATG+GGG 0.651779 4_1:+55481043 Msa0557160:CDS
GTACATTCGAAGTTAATGCA+GGG 0.654830 4_1:+55480931 Msa0557160:CDS
AGATGAGTTGAGTGGTGGTG+TGG 0.655150 4_1:-55479932 None:intergenic
CCAGGAAATAATCAGCCCCA+TGG 0.655999 4_1:-55481058 None:intergenic
AAGAAAGAAATCCTGGACCA+AGG 0.658709 4_1:+55471738 Msa0557160:intron
AGTTAGAACCGGGACACCGG+AGG 0.670287 4_1:-55481003 None:intergenic
AAGTAATCGAGGTTAACGCA+GGG 0.673390 4_1:+55472858 Msa0557160:CDS
ATGACATGACAACACTAGAG+GGG 0.676653 4_1:+55472284 Msa0557160:CDS
TATTAATGATGGGAGAGTGT+TGG 0.676983 4_1:+55472117 Msa0557160:CDS
TTCTTAATCTCATCTCTACG+TGG 0.679677 4_1:-55479748 None:intergenic
GCACTCATGTCAATGGCCGG+AGG 0.689498 4_1:-55472568 None:intergenic
GATGATGAAGATGAGTTGAG+TGG 0.699555 4_1:-55479940 None:intergenic
GATGAGATTAAGAAGATACG+TGG 0.711435 4_1:+55479757 Msa0557160:CDS
CCATTCATCTGTTAGAACCG+GGG 0.718411 4_1:-55472939 None:intergenic
CCGGTTCTAACAGATGAATG+GGG 0.722340 4_1:+55472941 Msa0557160:CDS
GATGAAGATGAGTTGAGTGG+TGG 0.726884 4_1:-55479937 None:intergenic
CCGGTTCTAACTGATGAGTG+GGG 0.745840 4_1:+55481014 Msa0557160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAATAAAATTAATTAA+CGG - chr4_1:55468214-55468233 None:intergenic 0.0%
!!! ATTTTATAATAATAAAATAA+TGG + chr4_1:55473439-55473458 Msa0557160:intron 0.0%
!! TATTTGATAAAATAATTTAG+TGG + chr4_1:55468232-55468251 Msa0557160:intron 10.0%
!! TGAAATTTATAAAATACTTA+CGG - chr4_1:55468533-55468552 None:intergenic 10.0%
!!! TTATTTTATTTTTTATGAAC+TGG + chr4_1:55468816-55468835 Msa0557160:intron 10.0%
!!! TTTTAAAAAATTTTCTAGAT+GGG - chr4_1:55469782-55469801 None:intergenic 10.0%
!!! TTTTTAAAAAATTTTCTAGA+TGG - chr4_1:55469783-55469802 None:intergenic 10.0%
!! TAAAAAAATCATTCAAAAAT+TGG + chr4_1:55470163-55470182 Msa0557160:intron 10.0%
!! TAATAATAATAAAAAGTAGA+AGG - chr4_1:55471254-55471273 None:intergenic 10.0%
!!! TTTCTAAAACTATTTTTTAT+GGG - chr4_1:55471603-55471622 None:intergenic 10.0%
!!! ATTTCTAAAACTATTTTTTA+TGG - chr4_1:55471604-55471623 None:intergenic 10.0%
!!! CTTTTTACTAAAAAAATTAA+AGG - chr4_1:55473413-55473432 None:intergenic 10.0%
!! AAAAATTTACTATAAAAAAG+AGG + chr4_1:55473511-55473530 Msa0557160:intron 10.0%
!!! TTATTTTTCATATATAACTA+TGG + chr4_1:55473664-55473683 Msa0557160:intron 10.0%
!!! CTAAATAAAATATTCAATTT+TGG - chr4_1:55475755-55475774 None:intergenic 10.0%
!! TTCAAAAAAAAAAAAACATA+GGG - chr4_1:55476722-55476741 None:intergenic 10.0%
!! ATTCAAAAAAAAAAAAACAT+AGG - chr4_1:55476723-55476742 None:intergenic 10.0%
!!! GATAATTTTATAAACAAAAA+AGG - chr4_1:55478553-55478572 None:intergenic 10.0%
!!! TTTAATAAAAATGATTTGTT+TGG - chr4_1:55479273-55479292 None:intergenic 10.0%
!!! TTCTATAACTAATTTTTTAT+GGG - chr4_1:55479512-55479531 None:intergenic 10.0%
!!! TTTCTATAACTAATTTTTTA+TGG - chr4_1:55479513-55479532 None:intergenic 10.0%
!! TTCTAATTAAGTTATTAGAT+CGG + chr4_1:55468008-55468027 Msa0557160:intron 15.0%
!! ATATATATATATATATCCGA+GGG - chr4_1:55468270-55468289 None:intergenic 15.0%
!! TATATATATATATATATCCG+AGG - chr4_1:55468271-55468290 None:intergenic 15.0%
!!! TTTTTTTAAAGTGAATAAGT+AGG + chr4_1:55468592-55468611 Msa0557160:intron 15.0%
!!! TTATCAACCAAATAATTTTT+GGG - chr4_1:55469269-55469288 None:intergenic 15.0%
!!! TTTATCAACCAAATAATTTT+TGG - chr4_1:55469270-55469289 None:intergenic 15.0%
!!! GATAAACAATTTTTTAAGTT+TGG + chr4_1:55469284-55469303 Msa0557160:intron 15.0%
!!! TTTAATTTTTTTTTTCCAAG+TGG - chr4_1:55469664-55469683 None:intergenic 15.0%
!!! AGATTTAAATAATTTTGCAA+CGG + chr4_1:55469711-55469730 Msa0557160:intron 15.0%
!!! TTGAAAAATTGTTTAAAATC+TGG - chr4_1:55469827-55469846 None:intergenic 15.0%
!! GGTCAAATTAAAAATAAAAA+AGG - chr4_1:55470689-55470708 None:intergenic 15.0%
!!! ATTTTTTTAAAGCTAAGATT+AGG - chr4_1:55471451-55471470 None:intergenic 15.0%
!!! AAATAGTTGATTTTAGATTT+AGG - chr4_1:55471481-55471500 None:intergenic 15.0%
!!! ATTATTTTTTAATTATCCCA+TGG + chr4_1:55472696-55472715 Msa0557160:intron 15.0%
!! AATTACAAATATAGATGATT+TGG + chr4_1:55473128-55473147 Msa0557160:intron 15.0%
!! TATATAACTATGGATTTAAT+TGG + chr4_1:55473674-55473693 Msa0557160:intron 15.0%
!!! TTATTTTGAAAATTACGTAT+AGG + chr4_1:55473759-55473778 Msa0557160:intron 15.0%
!! TCCATATTACTATATTTATA+GGG + chr4_1:55474697-55474716 Msa0557160:intron 15.0%
!! TATGAAATTCTATAAGAAAT+TGG - chr4_1:55476203-55476222 None:intergenic 15.0%
!! ATTTCTTATAGAATTTCATA+AGG + chr4_1:55476203-55476222 Msa0557160:intron 15.0%
!!! TCAAGATATTATTTTTTTGA+AGG + chr4_1:55477089-55477108 Msa0557160:intron 15.0%
!!! AAACAAATTATATATCGATT+TGG + chr4_1:55479210-55479229 Msa0557160:intron 15.0%
!! ATTATGATTTATATATCTCA+TGG + chr4_1:55480768-55480787 Msa0557160:intron 15.0%
!!! TTTTTTTTTTGAAAGATGTG+TGG - chr4_1:55467319-55467338 None:intergenic 20.0%
!! TGACTCAAGTTATATATTTA+TGG - chr4_1:55468443-55468462 None:intergenic 20.0%
!! ATATATAACTTGAGTCAAAA+AGG + chr4_1:55468446-55468465 Msa0557160:intron 20.0%
!! AATGAGATATGTATATGAAA+TGG + chr4_1:55468474-55468493 Msa0557160:intron 20.0%
!! ATATGTATATGAAATGGTAA+CGG + chr4_1:55468480-55468499 Msa0557160:intron 20.0%
!! ATTCTAATCACTAAACTATT+AGG - chr4_1:55468568-55468587 None:intergenic 20.0%
!! AAATAACGTTAAAACTCTTA+AGG - chr4_1:55468912-55468931 None:intergenic 20.0%
!! AATTAGTTCAAATACTTGTA+TGG + chr4_1:55469119-55469138 Msa0557160:intron 20.0%
!! ATTAGTTCAAATACTTGTAT+GGG + chr4_1:55469120-55469139 Msa0557160:intron 20.0%
!!! TTATTGTAGGTACAAAATTT+TGG - chr4_1:55469161-55469180 None:intergenic 20.0%
!!! TATCAACCAAATAATTTTTG+GGG - chr4_1:55469268-55469287 None:intergenic 20.0%
!! ACTAGCAATTTATTTATACT+TGG + chr4_1:55469605-55469624 Msa0557160:intron 20.0%
!! TAATTGATTGGACAATATAA+GGG - chr4_1:55469962-55469981 None:intergenic 20.0%
!! TTAATTGATTGGACAATATA+AGG - chr4_1:55469963-55469982 None:intergenic 20.0%
!!! TAGGAGAATTTTTAATTGAT+TGG - chr4_1:55469974-55469993 None:intergenic 20.0%
!! TTGTTTGTATTATTGTACAA+CGG - chr4_1:55470002-55470021 None:intergenic 20.0%
!! GAACAAACTTAAGATATTAA+TGG - chr4_1:55470118-55470137 None:intergenic 20.0%
!! GATTCAAATTGTATTATTCA+GGG - chr4_1:55470203-55470222 None:intergenic 20.0%
!! AATAGGTATGATATTCATAA+CGG + chr4_1:55470231-55470250 Msa0557160:intron 20.0%
!!! TCCAAAAAAACTCAAATTTT+TGG + chr4_1:55470282-55470301 Msa0557160:intron 20.0%
!!! ACCAAAAATTTGAGTTTTTT+TGG - chr4_1:55470286-55470305 None:intergenic 20.0%
!! TAATTGAAAGAGTAGAAAAA+GGG - chr4_1:55470412-55470431 None:intergenic 20.0%
!!! CTTTCTTCATATTATTTTGA+CGG - chr4_1:55470760-55470779 None:intergenic 20.0%
!! TATAGTAGTAGTAAATAAGA+GGG - chr4_1:55470809-55470828 None:intergenic 20.0%
!! ATATAGTAGTAGTAAATAAG+AGG - chr4_1:55470810-55470829 None:intergenic 20.0%
!!! ATCTCTGTATTTTGATATTT+AGG + chr4_1:55471039-55471058 Msa0557160:intron 20.0%
!!! TTTAGTTTTTTTTCCATGTT+AGG + chr4_1:55471372-55471391 Msa0557160:intron 20.0%
!!! TTAGTTTTTTTTCCATGTTA+GGG + chr4_1:55471373-55471392 Msa0557160:intron 20.0%
!!! AACTATTTGATCTTTTCTAA+TGG + chr4_1:55471493-55471512 Msa0557160:intron 20.0%
!! GCTTATAACAAATATTGTTT+AGG + chr4_1:55471704-55471723 Msa0557160:intron 20.0%
!! TATAACAAATATTGTTTAGG+TGG + chr4_1:55471707-55471726 Msa0557160:intron 20.0%
!! ATGAACAATGAAAATGAAAA+TGG + chr4_1:55472394-55472413 Msa0557160:CDS 20.0%
!! TTTATAAGGGAAAATGATTT+GGG - chr4_1:55473251-55473270 None:intergenic 20.0%
!!! TTTTATAAGGGAAAATGATT+TGG - chr4_1:55473252-55473271 None:intergenic 20.0%
!!! GGCAACTTTTTTTTTTATAA+GGG - chr4_1:55473264-55473283 None:intergenic 20.0%
!!! TGGCAACTTTTTTTTTTATA+AGG - chr4_1:55473265-55473284 None:intergenic 20.0%
!! ATTACCTAATCAAAATGATT+TGG - chr4_1:55473285-55473304 None:intergenic 20.0%
!! TTTGATTAGGTAATGATATT+TGG + chr4_1:55473291-55473310 Msa0557160:intron 20.0%
!!! AATTAGTGTTGAAGAATTAA+TGG - chr4_1:55473320-55473339 None:intergenic 20.0%
!! ATTTAATTGGTATACCTTAT+GGG + chr4_1:55473687-55473706 Msa0557160:intron 20.0%
!! AAAAAATATTTACACCCATA+AGG - chr4_1:55473704-55473723 None:intergenic 20.0%
!!! TCATAATTTTTCTTTCTTTC+CGG - chr4_1:55474198-55474217 None:intergenic 20.0%
!! ATTTATGTAATTAATGATCG+TGG + chr4_1:55474220-55474239 Msa0557160:intron 20.0%
!! AAACTAAATTCTTTCACATA+TGG - chr4_1:55474271-55474290 None:intergenic 20.0%
!!! CTTATTTTATTGTCAAAATG+AGG + chr4_1:55474449-55474468 Msa0557160:intron 20.0%
!! CTCCATATTACTATATTTAT+AGG + chr4_1:55474696-55474715 Msa0557160:intron 20.0%
!! ACCCTATAAATATAGTAATA+TGG - chr4_1:55474701-55474720 None:intergenic 20.0%
!! TATAATTCTCATTCACTATA+CGG - chr4_1:55475003-55475022 None:intergenic 20.0%
!!! TTGATTAAAAGAGTACTAAA+AGG - chr4_1:55475085-55475104 None:intergenic 20.0%
!! TATTTGATCTTATGATGATT+TGG - chr4_1:55475239-55475258 None:intergenic 20.0%
!! TAAGATCAAATAGATCTTAT+AGG + chr4_1:55475247-55475266 Msa0557160:intron 20.0%
!! ATTAAATCAAACATCTTGAA+GGG - chr4_1:55475333-55475352 None:intergenic 20.0%
!! AATTAAATCAAACATCTTGA+AGG - chr4_1:55475334-55475353 None:intergenic 20.0%
!! AGAAATGTAAAAAATGCAAA+GGG - chr4_1:55475385-55475404 None:intergenic 20.0%
!! AAGAAATGTAAAAAATGCAA+AGG - chr4_1:55475386-55475405 None:intergenic 20.0%
!! TTTAATACACATACAAACAA+AGG - chr4_1:55475468-55475487 None:intergenic 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG + chr4_1:55475509-55475528 Msa0557160:intron 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG + chr4_1:55475510-55475529 Msa0557160:intron 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG + chr4_1:55475511-55475530 Msa0557160:intron 20.0%
!! CAAAAATTGAGTAATTTCAT+AGG + chr4_1:55476144-55476163 Msa0557160:intron 20.0%
!!! ATTGGAACTATATTTTTTCA+TGG - chr4_1:55476185-55476204 None:intergenic 20.0%
!! CCAATAAAAAGAATGAATAT+TGG - chr4_1:55476576-55476595 None:intergenic 20.0%
!!! CCAATATTCATTCTTTTTAT+TGG + chr4_1:55476573-55476592 Msa0557160:intron 20.0%
!!! CTAATTTAAAATACTCATGA+TGG - chr4_1:55476625-55476644 None:intergenic 20.0%
!! TAGCATTTACTGTTATTAAT+TGG - chr4_1:55476825-55476844 None:intergenic 20.0%
!! AAATCAAATTCAATATCTTG+AGG - chr4_1:55476963-55476982 None:intergenic 20.0%
!! ACTTCTAAATATCTTGATAA+AGG - chr4_1:55477972-55477991 None:intergenic 20.0%
!!! TAGAAGTTTTGTTTTACTAA+AGG + chr4_1:55477985-55478004 Msa0557160:intron 20.0%
!! ACTCAAAATTGTATTATTCA+GGG - chr4_1:55478177-55478196 None:intergenic 20.0%
!! AACTCAAAATTGTATTATTC+AGG - chr4_1:55478178-55478197 None:intergenic 20.0%
!! AAAGTAGAAACAAACAAAAA+AGG - chr4_1:55470627-55470646 None:intergenic 20.0%
!!! ATCTCTATCTTTTGATATTT+AGG + chr4_1:55478898-55478917 Msa0557160:intron 20.0%
!!! GATATATAATTTGTTTCGAT+TGG - chr4_1:55479206-55479225 None:intergenic 20.0%
!!! TAGTAAAGATCAAATTTGTT+TGG - chr4_1:55479303-55479322 None:intergenic 20.0%
!!! AAATAGTTGATGTTAGATTT+AGG - chr4_1:55479398-55479417 None:intergenic 20.0%
!! ATCATAATATTAATACTCCA+TGG + chr4_1:55479534-55479553 Msa0557160:intron 20.0%
!! TTGAGAATCATATTAATGAA+AGG + chr4_1:55480124-55480143 Msa0557160:intron 20.0%
!! TGAGAATCATATTAATGAAA+GGG + chr4_1:55480125-55480144 Msa0557160:intron 20.0%
!! GAATATTCTCTTGATAAAAA+AGG - chr4_1:55480311-55480330 None:intergenic 20.0%
!! TTCAAATATTCATCCTTAAT+TGG - chr4_1:55480562-55480581 None:intergenic 20.0%
!! ATATAAATCATAATCATACC+CGG - chr4_1:55480762-55480781 None:intergenic 20.0%
! AGAACAGTCCTTAAAAAAAA+GGG + chr4_1:55467281-55467300 Msa0557160:intron 25.0%
!!! TCTGTTATCCCTTTTTTTTA+AGG - chr4_1:55467292-55467311 None:intergenic 25.0%
! TATTTGTGATAGAAATGTAG+AGG - chr4_1:55467506-55467525 None:intergenic 25.0%
! TTAACCAACTTGAATTAACT+TGG - chr4_1:55467971-55467990 None:intergenic 25.0%
! TTGCGTTTGTAAGATTTAAA+TGG + chr4_1:55468067-55468086 Msa0557160:intron 25.0%
!!! GTAACGGATGAAAATAAATA+AGG + chr4_1:55468496-55468515 Msa0557160:intron 25.0%
! TTGGATTACTATGTTATTGT+AGG - chr4_1:55469174-55469193 None:intergenic 25.0%
! AATGTTCCCCAAAAATTATT+TGG + chr4_1:55469259-55469278 Msa0557160:intron 25.0%
! AGCAATTTATTTATACTTGG+CGG + chr4_1:55469608-55469627 Msa0557160:intron 25.0%
! AATCTCGCAAAATAAACTTA+TGG - chr4_1:55469696-55469715 None:intergenic 25.0%
!! TTGTTTAAAATCTGGCAAAA+TGG - chr4_1:55469819-55469838 None:intergenic 25.0%
!!! TCAACTGTTTTAATTTTCGA+CGG + chr4_1:55469843-55469862 Msa0557160:intron 25.0%
! GGATTCAAATTGTATTATTC+AGG - chr4_1:55470204-55470223 None:intergenic 25.0%
! ATTTGAATCCAACAAGAAAT+AGG + chr4_1:55470214-55470233 Msa0557160:intron 25.0%
!! ATATCATACCTATTTCTTGT+TGG - chr4_1:55470225-55470244 None:intergenic 25.0%
!!! AGTTGTAAAGTTTTTTCTTC+AGG - chr4_1:55470317-55470336 None:intergenic 25.0%
!!! GTTTTGTTTGATTGGAAAAA+TGG - chr4_1:55470352-55470371 None:intergenic 25.0%
! GTAATTGAAAGAGTAGAAAA+AGG - chr4_1:55470413-55470432 None:intergenic 25.0%
! AAAGAAAGAAGAAATTGTGA+TGG - chr4_1:55470444-55470463 None:intergenic 25.0%
!!! ATGCAAGCGTTTTATTAAAT+AGG + chr4_1:55470722-55470741 Msa0557160:intron 25.0%
!!! TATTATTTTGACGGAAAATG+TGG - chr4_1:55470751-55470770 None:intergenic 25.0%
!!! AGTACTAGGTTTTATAAAAC+TGG - chr4_1:55471005-55471024 None:intergenic 25.0%
! GATTATTAGAGATAAGTACT+AGG - chr4_1:55471019-55471038 None:intergenic 25.0%
!!! TCGATATAATTTGTTTCGAT+TGG - chr4_1:55471352-55471371 None:intergenic 25.0%
!!! TAGTTTTTTTTCCATGTTAG+GGG + chr4_1:55471374-55471393 Msa0557160:intron 25.0%
! GTGAACAATTAGAAGAATTT+GGG + chr4_1:55471858-55471877 Msa0557160:CDS 25.0%
! TTAGAAGAATTTGGGAAAAT+TGG + chr4_1:55471866-55471885 Msa0557160:CDS 25.0%
! GAATCTCCAATATTAATGAT+GGG + chr4_1:55472107-55472126 Msa0557160:CDS 25.0%
!! AATAAGTATCATCTTGGTTT+TGG - chr4_1:55472171-55472190 None:intergenic 25.0%
! TTGAGAATCATATCAATGAA+GGG + chr4_1:55472251-55472270 Msa0557160:CDS 25.0%
! ATGTTATCATAATTAAGCAC+AGG - chr4_1:55472373-55472392 None:intergenic 25.0%
! CTCTTGATAAAAAAGATCAT+TGG - chr4_1:55472431-55472450 None:intergenic 25.0%
!! TATAACGATTAGTTGATGTT+TGG + chr4_1:55472777-55472796 Msa0557160:intron 25.0%
!! TAATTTGTACGTGTCTAATA+TGG + chr4_1:55473361-55473380 Msa0557160:intron 25.0%
!!! CATCTTTTGATCATTTTTAG+AGG - chr4_1:55473388-55473407 None:intergenic 25.0%
! AAATAGAGAGATCAATAATG+TGG - chr4_1:55473601-55473620 None:intergenic 25.0%
! GATTTAATTGGTATACCTTA+TGG + chr4_1:55473686-55473705 Msa0557160:intron 25.0%
! GGAAAGAAAGAAAAATTATG+AGG + chr4_1:55474197-55474216 Msa0557160:intron 25.0%
! ATTCTTTCACATATGGTAAA+TGG - chr4_1:55474264-55474283 None:intergenic 25.0%
!!! TTAGTTTGTTAATGCACTTT+TGG + chr4_1:55474310-55474329 Msa0557160:intron 25.0%
!! ATTTTATTGTCAAAATGAGG+AGG + chr4_1:55474452-55474471 Msa0557160:intron 25.0%
! AATCCAAAATCAAATTGAGT+AGG - chr4_1:55474967-55474986 None:intergenic 25.0%
!!! GCAATTATTTTGATTATCCT+TGG - chr4_1:55475308-55475327 None:intergenic 25.0%
! AAATGTAAAAAATGCAAAGG+GGG - chr4_1:55475383-55475402 None:intergenic 25.0%
! GAAATGTAAAAAATGCAAAG+GGG - chr4_1:55475384-55475403 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr4_1:55475521-55475540 Msa0557160:intron 25.0%
! GGACAAAAATAAAGTCAAAT+GGG + chr4_1:55475593-55475612 Msa0557160:intron 25.0%
!!! TATTCAAAATTTGCTGACTT+TGG - chr4_1:55475897-55475916 None:intergenic 25.0%
! TTGATTGTCATTATAGCTAT+CGG + chr4_1:55475934-55475953 Msa0557160:intron 25.0%
! ACTAGAAAACAAATATTCCT+TGG - chr4_1:55476011-55476030 None:intergenic 25.0%
! GAATTTCTTTCTATATCACT+TGG - chr4_1:55476042-55476061 None:intergenic 25.0%
! TAATTTCATAGGAGAGTTAT+TGG + chr4_1:55476155-55476174 Msa0557160:intron 25.0%
! CGTGTAAAATCAAAAACATA+GGG - chr4_1:55476752-55476771 None:intergenic 25.0%
! TCGTGTAAAATCAAAAACAT+AGG - chr4_1:55476753-55476772 None:intergenic 25.0%
!! TTTGATTTCCATTCATGAAA+AGG + chr4_1:55476975-55476994 Msa0557160:intron 25.0%
! TGGGTATTTCAAAATAAACA+GGG + chr4_1:55477158-55477177 Msa0557160:intron 25.0%
! TTCTTTGCTTGAAAATTTGT+CGG - chr4_1:55477784-55477803 None:intergenic 25.0%
! AGATCATCAATTCAAAACAT+CGG + chr4_1:55478137-55478156 Msa0557160:intron 25.0%
! AATGCAAAGTTCTTTCTTTA+GGG - chr4_1:55478262-55478281 None:intergenic 25.0%
! AAATGCAAAGTTCTTTCTTT+AGG - chr4_1:55478263-55478282 None:intergenic 25.0%
! TAATTGAACGAGTAGAAAAT+GGG - chr4_1:55478300-55478319 None:intergenic 25.0%
! GTAGTAGTAAATAACTGTAA+TGG - chr4_1:55478332-55478351 None:intergenic 25.0%
! TATGCGTTGTATTAAATAGA+AGG + chr4_1:55478597-55478616 Msa0557160:intron 25.0%
!!! CTTTCTTCATGTTATTTTGA+CGG - chr4_1:55478632-55478651 None:intergenic 25.0%
! AGGAGAAGAAATATATAGAA+TGG - chr4_1:55478718-55478737 None:intergenic 25.0%
! CTACAGTTATATATACAAAG+CGG + chr4_1:55478819-55478838 Msa0557160:intron 25.0%
! AAGTACTAGGATTTATAAAG+TGG - chr4_1:55478865-55478884 None:intergenic 25.0%
!!! GATTATAAAGAGAAAGTACT+AGG - chr4_1:55478878-55478897 None:intergenic 25.0%
! AATAATTAGAAGGAGTTGTT+TGG - chr4_1:55479103-55479122 None:intergenic 25.0%
!!! TTGGACTTTTTTAGTTTGTA+CGG - chr4_1:55479187-55479206 None:intergenic 25.0%
!!! ATTTGGTTTTTTTCCTTGTT+GGG + chr4_1:55479227-55479246 Msa0557160:intron 25.0%
! TTTACATTGTCAAGCAAATA+TGG - chr4_1:55479429-55479448 None:intergenic 25.0%
! TTGCTTGACAATGTAAATTT+AGG + chr4_1:55479432-55479451 Msa0557160:intron 25.0%
! GAATCTCCAATATTAATGAT+GGG + chr4_1:55472107-55472126 Msa0557160:CDS 25.0%
! TCATTAATATGATTCTCAAC+CGG - chr4_1:55480123-55480142 None:intergenic 25.0%
! AATGTTGATCTGCTTAATTA+TGG + chr4_1:55480231-55480250 Msa0557160:CDS 25.0%
! TTATCAAGAGAATATTCAAG+AGG + chr4_1:55480314-55480333 Msa0557160:CDS 25.0%
! TTTACTGACAATCAATTTCA+AGG + chr4_1:55480486-55480505 Msa0557160:intron 25.0%
! GTGCTAAATAATTCCAATTA+AGG + chr4_1:55480546-55480565 Msa0557160:intron 25.0%
! AAAAATTGTTCATACTAGCT+AGG - chr4_1:55480602-55480621 None:intergenic 25.0%
! AAGAATTTACGAACGTTAAA+CGG - chr4_1:55480957-55480976 None:intergenic 25.0%
! TTTAACGTTCGTAAATTCTT+TGG + chr4_1:55480957-55480976 Msa0557160:CDS 25.0%
GAGAACAGTCCTTAAAAAAA+AGG + chr4_1:55467280-55467299 Msa0557160:intron 30.0%
TCCAAAATTCCATCTGATAA+TGG + chr4_1:55467769-55467788 Msa0557160:intron 30.0%
CCAAAATTCCATCTGATAAT+GGG + chr4_1:55467770-55467789 Msa0557160:intron 30.0%
!! GAATTAACTTGGTGATGTTA+GGG - chr4_1:55467960-55467979 None:intergenic 30.0%
!! TGAATTAACTTGGTGATGTT+AGG - chr4_1:55467961-55467980 None:intergenic 30.0%
ATCACCAAGTTAATTCAAGT+TGG + chr4_1:55467964-55467983 Msa0557160:intron 30.0%
AAAATACTTACGGTACTTGA+GGG - chr4_1:55468523-55468542 None:intergenic 30.0%
TAAAATACTTACGGTACTTG+AGG - chr4_1:55468524-55468543 None:intergenic 30.0%
AAGTGAATAAGTAGGATGTA+CGG + chr4_1:55468600-55468619 Msa0557160:intron 30.0%
ATTATTATATGCAGAGACTG+AGG - chr4_1:55468634-55468653 None:intergenic 30.0%
!! CTCTGAAATTGTTATATGCA+GGG - chr4_1:55468663-55468682 None:intergenic 30.0%
!! ACTCTGAAATTGTTATATGC+AGG - chr4_1:55468664-55468683 None:intergenic 30.0%
TTGAGTCTCACAAAACTTAA+GGG - chr4_1:55468873-55468892 None:intergenic 30.0%
TTTGAGTCTCACAAAACTTA+AGG - chr4_1:55468874-55468893 None:intergenic 30.0%
!! TAAGTTTTGTGAGACTCAAA+TGG + chr4_1:55468874-55468893 Msa0557160:intron 30.0%
!! AAGTTTTGTGAGACTCAAAT+GGG + chr4_1:55468875-55468894 Msa0557160:intron 30.0%
!! TTAACGTTATTTCTCGTCTA+AGG + chr4_1:55468920-55468939 Msa0557160:intron 30.0%
GCTCAAAAAAAAAAAGTTCG+TGG - chr4_1:55468958-55468977 None:intergenic 30.0%
! CATTTTATCTAAACGCTCTT+AGG + chr4_1:55469018-55469037 Msa0557160:intron 30.0%
ACAATGATAAATTGAGCACT+CGG + chr4_1:55469319-55469338 Msa0557160:intron 30.0%
CACGATTATTTCACGAATAA+TGG + chr4_1:55469482-55469501 Msa0557160:intron 30.0%
TCAACTTATCCAAGATCTAA+TGG - chr4_1:55469512-55469531 None:intergenic 30.0%
GCAATTTATTTATACTTGGC+GGG + chr4_1:55469609-55469628 Msa0557160:intron 30.0%
CAATTTATTTATACTTGGCG+GGG + chr4_1:55469610-55469629 Msa0557160:intron 30.0%
! ATTTTTGTCATGCGTATACT+TGG + chr4_1:55469886-55469905 Msa0557160:intron 30.0%
TTATTGTACAACGGTTAACT+AGG - chr4_1:55469993-55470012 None:intergenic 30.0%
!!! TGTGAGATGTTTTGTTTGAT+TGG - chr4_1:55470360-55470379 None:intergenic 30.0%
AAACATCTCACATTTCTTCT+TGG + chr4_1:55470368-55470387 Msa0557160:intron 30.0%
! CTACTTTCCTTTTACTTCAT+TGG + chr4_1:55470640-55470659 Msa0557160:intron 30.0%
TAAAACGCTTGCATATAGAA+GGG - chr4_1:55470716-55470735 None:intergenic 30.0%
ATAAAACGCTTGCATATAGA+AGG - chr4_1:55470717-55470736 None:intergenic 30.0%
!! CAAGCGTTTTATTAAATAGG+AGG + chr4_1:55470725-55470744 Msa0557160:intron 30.0%
AAAAAGTAGAAGGAGTTGTT+TGG - chr4_1:55471244-55471263 None:intergenic 30.0%
TAGTAGAGATCATGTTTGTT+TGG - chr4_1:55471418-55471437 None:intergenic 30.0%
TTAGGATTTCAATGCAAGTA+AGG + chr4_1:55471545-55471564 Msa0557160:intron 30.0%
TTGCTTGAATGTGTGAATTT+AGG - chr4_1:55471574-55471593 None:intergenic 30.0%
GTAAACTTTGCATGTTTGAT+CGG + chr4_1:55471682-55471701 Msa0557160:intron 30.0%
GATAATGAAGAAAGAAATCC+TGG + chr4_1:55471731-55471750 Msa0557160:intron 30.0%
ATCTTCTTGATTTCATCTAC+AGG - chr4_1:55471836-55471855 None:intergenic 30.0%
CGTGAACAATTAGAAGAATT+TGG + chr4_1:55471857-55471876 Msa0557160:CDS 30.0%
!!! TGCTTTTTTGTTTTTGCCTT+TGG - chr4_1:55471930-55471949 None:intergenic 30.0%
!!! GTTGTCTTTTTGATTTCTTG+GGG - chr4_1:55471958-55471977 None:intergenic 30.0%
!!! GGTTGTCTTTTTGATTTCTT+GGG - chr4_1:55471959-55471978 None:intergenic 30.0%
!!! TGGTTGTCTTTTTGATTTCT+TGG - chr4_1:55471960-55471979 None:intergenic 30.0%
GGAATCTCCAATATTAATGA+TGG + chr4_1:55472106-55472125 Msa0557160:CDS 30.0%
TGTGAGAATAAGTATCATCT+TGG - chr4_1:55472177-55472196 None:intergenic 30.0%
TCATTGATATGATTCTCAAC+CGG - chr4_1:55472250-55472269 None:intergenic 30.0%
GTTGAGAATCATATCAATGA+AGG + chr4_1:55472250-55472269 Msa0557160:CDS 30.0%
TGAGAATCATATCAATGAAG+GGG + chr4_1:55472252-55472271 Msa0557160:CDS 30.0%
TTATCAAGAGAATGTTCAAG+AGG + chr4_1:55472441-55472460 Msa0557160:CDS 30.0%
TGACACCAAAATTAAATTGC+GGG - chr4_1:55472501-55472520 None:intergenic 30.0%
GTGACACCAAAATTAAATTG+CGG - chr4_1:55472502-55472521 None:intergenic 30.0%
AAAAGGAATGGAATATCAAC+AGG - chr4_1:55472595-55472614 None:intergenic 30.0%
! ATTACCTTGAAGTTGATCAT+CGG - chr4_1:55472620-55472639 None:intergenic 30.0%
!!! TTAGTTGATGTTTGGTTTTC+AGG + chr4_1:55472785-55472804 Msa0557160:intron 30.0%
!!! GTTGCCAAATCATTTTGATT+AGG + chr4_1:55473278-55473297 Msa0557160:intron 30.0%
CTAATATAGATCAAGTCCAA+TGG - chr4_1:55473542-55473561 None:intergenic 30.0%
! ACTATATACGCACAATCTTT+TGG + chr4_1:55473877-55473896 Msa0557160:intron 30.0%
ATGCTGATAACTCAATTGTA+AGG - chr4_1:55474124-55474143 None:intergenic 30.0%
TGTTAGCTCATTTCAACTAT+AGG - chr4_1:55474175-55474194 None:intergenic 30.0%
!! AAGAATTTAGTTTGCGTGTT+AGG + chr4_1:55474278-55474297 Msa0557160:intron 30.0%
!! GTGTATTGATAGCATGTTTT+CGG + chr4_1:55474347-55474366 Msa0557160:intron 30.0%
!!! GCGTGTTTTTGAAACAATTT+TGG + chr4_1:55474670-55474689 Msa0557160:intron 30.0%
!! TTGCCTACTCAATTTGATTT+TGG + chr4_1:55474961-55474980 Msa0557160:intron 30.0%
TCATTGCTGATAAAGATTTG+TGG - chr4_1:55475285-55475304 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG - chr4_1:55475459-55475478 None:intergenic 30.0%
ATGCATCCAGTAATTTGAAA+AGG + chr4_1:55475557-55475576 Msa0557160:intron 30.0%
TGCATCCAGTAATTTGAAAA+GGG + chr4_1:55475558-55475577 Msa0557160:intron 30.0%
! TAAACCCCTTTTCAAATTAC+TGG - chr4_1:55475566-55475585 None:intergenic 30.0%
TTGAAAAGGGGTTTACATTT+AGG + chr4_1:55475571-55475590 Msa0557160:intron 30.0%
TGAAAAGGGGTTTACATTTA+GGG + chr4_1:55475572-55475591 Msa0557160:intron 30.0%
GGGACAAAAATAAAGTCAAA+TGG + chr4_1:55475592-55475611 Msa0557160:intron 30.0%
TCAAATGGGTGTTTAGATAT+AGG + chr4_1:55475607-55475626 Msa0557160:intron 30.0%
CAAATGGGTGTTTAGATATA+GGG + chr4_1:55475608-55475627 Msa0557160:intron 30.0%
!! AGTCATAAAAGCATTCAGTA+CGG - chr4_1:55475725-55475744 None:intergenic 30.0%
! TATGATTCTAGTTGTTAGAC+AGG + chr4_1:55475803-55475822 Msa0557160:intron 30.0%
! ATGATTCTAGTTGTTAGACA+GGG + chr4_1:55475804-55475823 Msa0557160:intron 30.0%
TTGGATTTACAATGACAAAC+TGG + chr4_1:55475828-55475847 Msa0557160:intron 30.0%
! ATGATGGAACTATTTAGAGT+GGG - chr4_1:55476075-55476094 None:intergenic 30.0%
ACTCTAAATAGTTCCATCAT+GGG + chr4_1:55476075-55476094 Msa0557160:intron 30.0%
TTGATATGAAGAAGAAGACA+TGG + chr4_1:55476238-55476257 Msa0557160:intron 30.0%
!!! ATGTTCTTTTCAAGTATGAG+CGG + chr4_1:55476312-55476331 Msa0557160:intron 30.0%
CTTTCTACAACTATTATGCA+AGG + chr4_1:55476368-55476387 Msa0557160:intron 30.0%
AAAAAGATCGCAGTTGTTTA+TGG + chr4_1:55476408-55476427 Msa0557160:intron 30.0%
TTCCTAGAGTCTATAAAGAA+AGG + chr4_1:55476693-55476712 Msa0557160:intron 30.0%
TTCCTTTCTTTATAGACTCT+AGG - chr4_1:55476698-55476717 None:intergenic 30.0%
ACTAAGAGTTTCAATACAAC+TGG + chr4_1:55477138-55477157 Msa0557160:intron 30.0%
CTAAGAGTTTCAATACAACT+GGG + chr4_1:55477139-55477158 Msa0557160:intron 30.0%
CTGGGTATTTCAAAATAAAC+AGG + chr4_1:55477157-55477176 Msa0557160:intron 30.0%
GGGTATTTCAAAATAAACAG+GGG + chr4_1:55477159-55477178 Msa0557160:intron 30.0%
GGTATTTCAAAATAAACAGG+GGG + chr4_1:55477160-55477179 Msa0557160:intron 30.0%
GTCTTTCCTGTCATAAAAAA+AGG + chr4_1:55477321-55477340 Msa0557160:intron 30.0%
ACATCAACTTAAACAAGACA+AGG + chr4_1:55477442-55477461 Msa0557160:intron 30.0%
! ACAAGGTAATGACAAAGTTT+TGG + chr4_1:55477459-55477478 Msa0557160:intron 30.0%
AACTAGCAATTTCTCAAGTT+TGG + chr4_1:55478112-55478131 Msa0557160:intron 30.0%
GTAATTGAACGAGTAGAAAA+TGG - chr4_1:55478301-55478320 None:intergenic 30.0%
TACAACGCATACATATAGAA+GGG - chr4_1:55478588-55478607 None:intergenic 30.0%
ATACAACGCATACATATAGA+AGG - chr4_1:55478589-55478608 None:intergenic 30.0%
!!! TGTTATTTTGACGGAAAATG+TGG - chr4_1:55478623-55478642 None:intergenic 30.0%
TGCAAAGAGTAAATAAGAGA+GGG - chr4_1:55478682-55478701 None:intergenic 30.0%
TTGCAAAGAGTAAATAAGAG+AGG - chr4_1:55478683-55478702 None:intergenic 30.0%
! AGATCGATAGTTGATATACT+GGG - chr4_1:55478961-55478980 None:intergenic 30.0%
!!! GATTTGGTTTTTTTCCTTGT+TGG + chr4_1:55479226-55479245 Msa0557160:intron 30.0%
!!! TTTGGTTTTTTTCCTTGTTG+GGG + chr4_1:55479228-55479247 Msa0557160:intron 30.0%
TTGCTTGAATGTGTGAATTT+AGG - chr4_1:55471574-55471593 None:intergenic 30.0%
GCTTACCACAAATATTGTTT+AGG + chr4_1:55479622-55479641 Msa0557160:intron 30.0%
TACCACAAATATTGTTTAGG+TGG + chr4_1:55479625-55479644 Msa0557160:intron 30.0%
GTGGACAATTAGAAGAATTT+GGG + chr4_1:55479776-55479795 Msa0557160:CDS 30.0%
! GTTTCCTGTTTCTTGTTATA+GGG - chr4_1:55479871-55479890 None:intergenic 30.0%
! TGTTTCCTGTTTCTTGTTAT+AGG - chr4_1:55479872-55479891 None:intergenic 30.0%
TCATCTTCCTCTAACAATAT+TGG + chr4_1:55479958-55479977 Msa0557160:CDS 30.0%
GGAATCTCCAATATTAATGA+TGG + chr4_1:55472106-55472125 Msa0557160:CDS 30.0%
CATTAATATGATTCTCAACC+GGG - chr4_1:55480122-55480141 None:intergenic 30.0%
TAGTGCTTAATGACATGATA+AGG + chr4_1:55480148-55480167 Msa0557160:intron 30.0%
! ATCAACATTTTCTTGAGGTA+GGG - chr4_1:55480220-55480239 None:intergenic 30.0%
ATTTCCATTTCCATTTCCAT+GGG - chr4_1:55480268-55480287 None:intergenic 30.0%
! TGACACCAAAATTAAGTTGT+GGG - chr4_1:55480374-55480393 None:intergenic 30.0%
! ATGACACCAAAATTAAGTTG+TGG - chr4_1:55480375-55480394 None:intergenic 30.0%
GAAATTGATTGTCAGTAAAG+AGG - chr4_1:55480485-55480504 None:intergenic 30.0%
ATCAGAGTTGTATATTGCAC+TGG - chr4_1:55467437-55467456 None:intergenic 35.0%
TAGAAATGTAGAGGATGATG+TGG - chr4_1:55467497-55467516 None:intergenic 35.0%
! AACTAACAAAGCGTCTTCAT+CGG + chr4_1:55467584-55467603 Msa0557160:intron 35.0%
! AGGAAAATAGTGTTGCTCAA+CGG - chr4_1:55467615-55467634 None:intergenic 35.0%
! CAGATGGAATTTTGGATTTC+TGG - chr4_1:55467765-55467784 None:intergenic 35.0%
! CCCATTATCAGATGGAATTT+TGG - chr4_1:55467773-55467792 None:intergenic 35.0%
ATCACAAACCCATTATCAGA+TGG - chr4_1:55467781-55467800 None:intergenic 35.0%
TCTCTCTATCTCTATGTTAC+AGG + chr4_1:55467839-55467858 Msa0557160:intron 35.0%
AAAAAATCAGATGTGCCACA+TGG + chr4_1:55467875-55467894 Msa0557160:intron 35.0%
ATTCCACTTCCATGACATTA+AGG - chr4_1:55467937-55467956 None:intergenic 35.0%
AATCTTACAAACGCAAGTGT+AGG - chr4_1:55468063-55468082 None:intergenic 35.0%
ATATATATATCCGAGGGTCA+GGG - chr4_1:55468264-55468283 None:intergenic 35.0%
TATATATATATCCGAGGGTC+AGG - chr4_1:55468265-55468284 None:intergenic 35.0%
AGTGAATAAGTAGGATGTAC+GGG + chr4_1:55468601-55468620 Msa0557160:intron 35.0%
ATATCTACAATTGCGTGCAA+AGG - chr4_1:55468846-55468865 None:intergenic 35.0%
!! TTCTGGTTTATCTAAGTTCG+TGG - chr4_1:55468987-55469006 None:intergenic 35.0%
AAAATGATACGAGTCTCTTC+TGG - chr4_1:55469004-55469023 None:intergenic 35.0%
!! AGGTACAAAATTTTGGTCGT+TGG - chr4_1:55469154-55469173 None:intergenic 35.0%
AATTGAGCACTCGGTTAAAT+TGG + chr4_1:55469328-55469347 Msa0557160:intron 35.0%
AATGGACAACCATTAGATCT+TGG + chr4_1:55469500-55469519 Msa0557160:intron 35.0%
! ACCATCGTCAGATAAGTTTT+CGG + chr4_1:55469578-55469597 Msa0557160:intron 35.0%
TGAAACCCATGCTAATTAGA+AGG - chr4_1:55469934-55469953 None:intergenic 35.0%
TTGATTGGACAATATAAGGG+AGG - chr4_1:55469959-55469978 None:intergenic 35.0%
TGAAAGAGTAGAAAAAGGGA+GGG - chr4_1:55470408-55470427 None:intergenic 35.0%
TTGAAAGAGTAGAAAAAGGG+AGG - chr4_1:55470409-55470428 None:intergenic 35.0%
TTAAGCAGTGTAAGTAAAGC+TGG + chr4_1:55470566-55470585 Msa0557160:intron 35.0%
CACATCACCAATGAAGTAAA+AGG - chr4_1:55470650-55470669 None:intergenic 35.0%
! CTTTTGATCAATGGAAGAGA+AGG - chr4_1:55470842-55470861 None:intergenic 35.0%
!!! GTTTTTCAGTTTGCTAGCAA+TGG - chr4_1:55470867-55470886 None:intergenic 35.0%
GGGATAGATAGAGAAAGTAA+GGG - chr4_1:55471082-55471101 None:intergenic 35.0%
TGGGATAGATAGAGAAAGTA+AGG - chr4_1:55471083-55471102 None:intergenic 35.0%
! CTCGTAAGAAGAAAGTACAT+TGG + chr4_1:55471129-55471148 Msa0557160:intron 35.0%
! GGTGACTTTATAAACTTGCT+TGG - chr4_1:55471155-55471174 None:intergenic 35.0%
TGTTTATATGTCCCCTAACA+TGG - chr4_1:55471388-55471407 None:intergenic 35.0%
TTTACACCGTCAAGCAAATA+TGG - chr4_1:55471524-55471543 None:intergenic 35.0%
TTGCTTGACGGTGTAAATTT+AGG + chr4_1:55471527-55471546 Msa0557160:intron 35.0%
TTCTTGATTTCATCTACAGG+TGG - chr4_1:55471833-55471852 None:intergenic 35.0%
!!! CTTTTTGATTTCTTGGGGTA+GGG - chr4_1:55471953-55471972 None:intergenic 35.0%
!!! TCTTTTTGATTTCTTGGGGT+AGG - chr4_1:55471954-55471973 None:intergenic 35.0%
ATTTGTGGGAGAGAGTTATT+AGG - chr4_1:55471998-55472017 None:intergenic 35.0%
! GAAGATGATGAAGATGGATT+AGG - chr4_1:55472034-55472053 None:intergenic 35.0%
TTAGAGGAAGATGATGAAGA+TGG - chr4_1:55472040-55472059 None:intergenic 35.0%
CACTCTCCCATCATTAATAT+TGG - chr4_1:55472116-55472135 None:intergenic 35.0%
! TATTAATGATGGGAGAGTGT+TGG + chr4_1:55472117-55472136 Msa0557160:CDS 35.0%
!!! GTATCATCTTGGTTTTGGTT+CGG - chr4_1:55472166-55472185 None:intergenic 35.0%
AAAGAGGAAAATTGGGGTTT+AGG - chr4_1:55472226-55472245 None:intergenic 35.0%
CATTGATATGATTCTCAACC+GGG - chr4_1:55472249-55472268 None:intergenic 35.0%
TAATGACATGACAACACTAG+AGG + chr4_1:55472282-55472301 Msa0557160:CDS 35.0%
AATGACATGACAACACTAGA+GGG + chr4_1:55472283-55472302 Msa0557160:CDS 35.0%
! TCAACATTTTGTTGAGGTGA+GGG - chr4_1:55472346-55472365 None:intergenic 35.0%
! ATCAACATTTTGTTGAGGTG+AGG - chr4_1:55472347-55472366 None:intergenic 35.0%
! GGAAGATCAACATTTTGTTG+AGG - chr4_1:55472352-55472371 None:intergenic 35.0%
! AATTAAATTGCGGGTCTTGT+TGG - chr4_1:55472492-55472511 None:intergenic 35.0%
!! CAAGACCCGCAATTTAATTT+TGG + chr4_1:55472493-55472512 Msa0557160:CDS 35.0%
TGATCATCGGTAAAAAGGAA+TGG - chr4_1:55472607-55472626 None:intergenic 35.0%
! GAAGTTGATCATCGGTAAAA+AGG - chr4_1:55472612-55472631 None:intergenic 35.0%
TTTACCGATGATCAACTTCA+AGG + chr4_1:55472613-55472632 Msa0557160:CDS 35.0%
ACCCAAAATTTCAAGCACAA+GGG + chr4_1:55472669-55472688 Msa0557160:intron 35.0%
! ACCCTTGTGCTTGAAATTTT+GGG - chr4_1:55472673-55472692 None:intergenic 35.0%
! TACCCTTGTGCTTGAAATTT+TGG - chr4_1:55472674-55472693 None:intergenic 35.0%
!!! GATGTTTGGTTTTCAGGTTT+TGG + chr4_1:55472791-55472810 Msa0557160:intron 35.0%
AAGGATTCACGAACGTTAAA+GGG - chr4_1:55472884-55472903 None:intergenic 35.0%
AAAGGATTCACGAACGTTAA+AGG - chr4_1:55472885-55472904 None:intergenic 35.0%
TTTAACGTTCGTGAATCCTT+TGG + chr4_1:55472884-55472903 Msa0557160:CDS 35.0%
CAGAACTACTCTATTACCAA+AGG - chr4_1:55472903-55472922 None:intergenic 35.0%
ATATAGATCAAGTCCAATGG+CGG - chr4_1:55473539-55473558 None:intergenic 35.0%
TGTGAAGTGATAGGAAAAGA+GGG - chr4_1:55473571-55473590 None:intergenic 35.0%
GGTAAATAGTGTGAAGTGAT+AGG - chr4_1:55473580-55473599 None:intergenic 35.0%
!!! GACACGCATTTTTTTCAAAC+TGG + chr4_1:55473905-55473924 Msa0557160:intron 35.0%
GATGAAATGTTTGAGAGTGA+TGG + chr4_1:55474042-55474061 Msa0557160:intron 35.0%
ACAATTGAGTTATCAGCATG+CGG + chr4_1:55474125-55474144 Msa0557160:intron 35.0%
TAGTTGAAATGAGCTAACAC+CGG + chr4_1:55474176-55474195 Msa0557160:intron 35.0%
TCAAAATGAGGAGGAGATAA+TGG + chr4_1:55474461-55474480 Msa0557160:intron 35.0%
TTGAAGTCTATCTTGAACAG+AGG + chr4_1:55474785-55474804 Msa0557160:intron 35.0%
TCTTCATCGTTGTTGTATGA+AGG - chr4_1:55474845-55474864 None:intergenic 35.0%
! CTACTTCAAGAGCATATTCA+AGG + chr4_1:55475180-55475199 Msa0557160:intron 35.0%
ATCTTTATCAGCAATGACCA+AGG + chr4_1:55475288-55475307 Msa0557160:intron 35.0%
GCATCCAGTAATTTGAAAAG+GGG + chr4_1:55475559-55475578 Msa0557160:intron 35.0%
AAGTAAACTCTTGATCTGAG+TGG + chr4_1:55475658-55475677 Msa0557160:intron 35.0%
TCCATTAAAGAAGTTGACCA+AGG + chr4_1:55475991-55476010 Msa0557160:intron 35.0%
TCCTTGGTCAACTTCTTTAA+TGG - chr4_1:55475995-55476014 None:intergenic 35.0%
! GAACTATTTAGAGTGGGATT+TGG - chr4_1:55476069-55476088 None:intergenic 35.0%
! CATGATGGAACTATTTAGAG+TGG - chr4_1:55476076-55476095 None:intergenic 35.0%
CACTCTAAATAGTTCCATCA+TGG + chr4_1:55476074-55476093 Msa0557160:intron 35.0%
GGGTTTATGTCAGAAGAATT+TGG + chr4_1:55476120-55476139 Msa0557160:intron 35.0%
AACACAGGAACAGTATAAAG+AGG + chr4_1:55476261-55476280 Msa0557160:intron 35.0%
ATGGTTTGAGAAATTGCAAG+CGG + chr4_1:55476427-55476446 Msa0557160:intron 35.0%
ACATGGTGTTTGTGATCTAA+TGG + chr4_1:55476471-55476490 Msa0557160:intron 35.0%
! TCACTTGAGTTTAAAGCAAG+TGG + chr4_1:55476917-55476936 Msa0557160:intron 35.0%
! TTGAGTTTAAAGCAAGTGGT+TGG + chr4_1:55476921-55476940 Msa0557160:intron 35.0%
! CTCATGTTCCTTTTCATGAA+TGG - chr4_1:55476986-55477005 None:intergenic 35.0%
!! TTTATTTTCCAACTCTAGGG+TGG - chr4_1:55477254-55477273 None:intergenic 35.0%
!!! GGCTTTATTTTCCAACTCTA+GGG - chr4_1:55477257-55477276 None:intergenic 35.0%
! CTCTTGTCGTTCTTTGTTTA+CGG - chr4_1:55477278-55477297 None:intergenic 35.0%
AGAGATAATGCAACCAGATT+CGG + chr4_1:55477294-55477313 Msa0557160:intron 35.0%
!!! CTGATGCCTTTTTTTATGAC+AGG - chr4_1:55477330-55477349 None:intergenic 35.0%
ATGCAAGAACAACATAGTGT+TGG + chr4_1:55477674-55477693 Msa0557160:intron 35.0%
AAAATGACAGTCGTAGATGA+TGG + chr4_1:55477804-55477823 Msa0557160:intron 35.0%
! ATACAGGTTTGGAATAAAGC+TGG - chr4_1:55477867-55477886 None:intergenic 35.0%
TTCCAAACCTGTATAGCAAA+CGG + chr4_1:55477873-55477892 Msa0557160:intron 35.0%
ACGTGTACTAACTTTAACCA+TGG + chr4_1:55478083-55478102 Msa0557160:intron 35.0%
TACTAACTTTAACCATGGTG+TGG + chr4_1:55478088-55478107 Msa0557160:intron 35.0%
!! GTTCTTTCTTTAGGGTTTCT+TGG - chr4_1:55478254-55478273 None:intergenic 35.0%
CTACTTTCCCTTTACTTCAT+TGG + chr4_1:55478504-55478523 Msa0557160:intron 35.0%
CACATCACCAATGAAGTAAA+GGG - chr4_1:55470650-55470669 None:intergenic 35.0%
ACACATCACCAATGAAGTAA+AGG - chr4_1:55470651-55470670 None:intergenic 35.0%
CTTACACTGAAGAAAATTGC+TGG - chr4_1:55478793-55478812 None:intergenic 35.0%
! AGTTGATATACTGGGATAGA+TGG - chr4_1:55478953-55478972 None:intergenic 35.0%
! CAGATCGATAGTTGATATAC+TGG - chr4_1:55478962-55478981 None:intergenic 35.0%
TATCAACTATCGATCTGTGA+TGG + chr4_1:55478965-55478984 Msa0557160:intron 35.0%
ATGCAGAAGATTCTGATTGT+TGG - chr4_1:55479051-55479070 None:intergenic 35.0%
AACAATCAGAATCTTCTGCA+TGG + chr4_1:55479050-55479069 Msa0557160:intron 35.0%
AAACCATTGAAGAGAGAAGA+GGG - chr4_1:55479080-55479099 None:intergenic 35.0%
!!! TTGGTTTTTTTCCTTGTTGG+GGG + chr4_1:55479229-55479248 Msa0557160:intron 35.0%
TCATTACACTGTATGAACCA+TGG - chr4_1:55479554-55479573 None:intergenic 35.0%
GCAAACTTTGCATGTTTGAT+TGG + chr4_1:55479600-55479619 Msa0557160:intron 35.0%
CTCCACCTAAACAATATTTG+TGG - chr4_1:55471712-55471731 None:intergenic 35.0%
TTCTTAATCTCATCTCTACG+TGG - chr4_1:55479751-55479770 None:intergenic 35.0%
GATGAGATTAAGAAGATACG+TGG + chr4_1:55479757-55479776 Msa0557160:CDS 35.0%
CGTGGACAATTAGAAGAATT+TGG + chr4_1:55479775-55479794 Msa0557160:CDS 35.0%
TTGAAACCAATAAAAGACGC+TGG - chr4_1:55479815-55479834 None:intergenic 35.0%
! CTTGTTATAGGGTACTTTGT+TGG - chr4_1:55479860-55479879 None:intergenic 35.0%
AGTACCCTATAACAAGAAAC+AGG + chr4_1:55479864-55479883 Msa0557160:CDS 35.0%
GGAGATTCCAATATTGTTAG+AGG - chr4_1:55472095-55472114 None:intergenic 35.0%
! CTCCAATATTAATGATGGGA+CGG + chr4_1:55472111-55472130 Msa0557160:CDS 35.0%
! GATAAGTATCACCTTGGTTT+TGG - chr4_1:55480044-55480063 None:intergenic 35.0%
! GATCAACATTTTCTTGAGGT+AGG - chr4_1:55480221-55480240 None:intergenic 35.0%
! AGCAGATCAACATTTTCTTG+AGG - chr4_1:55480225-55480244 None:intergenic 35.0%
CATTTCCATTTCCATTTCCA+TGG - chr4_1:55480269-55480288 None:intergenic 35.0%
CATGGAAATGGAAATGGAAA+TGG + chr4_1:55480267-55480286 Msa0557160:CDS 35.0%
! AATTAAGTTGTGGGTCTTGT+TGG - chr4_1:55480365-55480384 None:intergenic 35.0%
! CAAGACCCACAACTTAATTT+TGG + chr4_1:55480366-55480385 Msa0557160:CDS 35.0%
AAAGAGGAATGGAACATCAT+GGG - chr4_1:55480469-55480488 None:intergenic 35.0%
TAAAGAGGAATGGAACATCA+TGG - chr4_1:55480470-55480489 None:intergenic 35.0%
TGATTGTCAGTAAAGAGGAA+TGG - chr4_1:55480480-55480499 None:intergenic 35.0%
!! TACCCGGTGCTTTAAATTTT+GGG - chr4_1:55480746-55480765 None:intergenic 35.0%
!! ATACCCGGTGCTTTAAATTT+TGG - chr4_1:55480747-55480766 None:intergenic 35.0%
TGTAGGGTGATTACTATCAA+CGG + chr4_1:55480909-55480928 Msa0557160:CDS 35.0%
GTACATTCGAAGTTAATGCA+GGG + chr4_1:55480931-55480950 Msa0557160:CDS 35.0%
AAGGTCTCAAGCTAACATCA+CGG + chr4_1:55467134-55467153 Msa0557160:intron 40.0%
ATTCCACTTCCGTGACATTA+AGG + chr4_1:55467157-55467176 Msa0557160:intron 40.0%
TTAAAATCAGATGTGCCACG+TGG - chr4_1:55467219-55467238 None:intergenic 40.0%
!! GAAGGGTTTGTGATGGATAA+GGG - chr4_1:55467386-55467405 None:intergenic 40.0%
GTTGTATATTGCACTGGAGA+AGG - chr4_1:55467431-55467450 None:intergenic 40.0%
GATTTCACGTCCAATTGAAC+CGG + chr4_1:55467454-55467473 Msa0557160:intron 40.0%
! CTTGAATCAACCGGTTCAAT+TGG - chr4_1:55467467-55467486 None:intergenic 40.0%
CATTGTCGAAAAGAGGAAGT+TGG - chr4_1:55467644-55467663 None:intergenic 40.0%
! CAACTTCCTCTTTTCGACAA+TGG + chr4_1:55467642-55467661 Msa0557160:intron 40.0%
!! TAATGGGTTTGTGATGTGTG+AGG + chr4_1:55467786-55467805 Msa0557160:intron 40.0%
! AATGGGTTTGTGATGTGTGA+GGG + chr4_1:55467787-55467806 Msa0557160:intron 40.0%
GTGAATAAGTAGGATGTACG+GGG + chr4_1:55468602-55468621 Msa0557160:intron 40.0%
AATCGTGATGTGTTTCATCG+AGG - chr4_1:55469469-55469488 None:intergenic 40.0%
! CCATCGTCAGATAAGTTTTC+GGG + chr4_1:55469579-55469598 Msa0557160:intron 40.0%
TGCAAATCCAAATATCCGCA+AGG + chr4_1:55469745-55469764 Msa0557160:intron 40.0%
TACACAACCTTGCGGATATT+TGG - chr4_1:55469755-55469774 None:intergenic 40.0%
! TATACTTGGCTGGTTAATGG+AGG + chr4_1:55469900-55469919 Msa0557160:intron 40.0%
TACGGACCTTCTAATTAGCA+TGG + chr4_1:55469925-55469944 Msa0557160:intron 40.0%
ACGGACCTTCTAATTAGCAT+GGG + chr4_1:55469926-55469945 Msa0557160:intron 40.0%
AGTAGAAAAAGGGAGGGATA+AGG - chr4_1:55470402-55470421 None:intergenic 40.0%
AAGGAGTTGTGCATGATCAA+TGG - chr4_1:55470468-55470487 None:intergenic 40.0%
GTAAGTAAAGCTGGCAAACA+TGG + chr4_1:55470575-55470594 Msa0557160:intron 40.0%
GCTTGCATATAGAAGGGAAA+AGG - chr4_1:55470710-55470729 None:intergenic 40.0%
! GCAATGGTGCTTTTGATCAA+TGG - chr4_1:55470851-55470870 None:intergenic 40.0%
TGATCGATCGTTGATATGCT+GGG - chr4_1:55471102-55471121 None:intergenic 40.0%
TATCAACGATCGATCAGCAA+TGG + chr4_1:55471106-55471125 Msa0557160:intron 40.0%
!! ATGCAGACGATTTTGATGGT+TGG - chr4_1:55471192-55471211 None:intergenic 40.0%
AACCATCAAAATCGTCTGCA+TGG + chr4_1:55471191-55471210 Msa0557160:intron 40.0%
! TACCATGCAGACGATTTTGA+TGG - chr4_1:55471196-55471215 None:intergenic 40.0%
AAACCATTGAAGAGAGAGGA+GGG - chr4_1:55471221-55471240 None:intergenic 40.0%
TTGGAAACCATTGAAGAGAG+AGG - chr4_1:55471225-55471244 None:intergenic 40.0%
GTCTGACCATATTTGCTTGA+CGG + chr4_1:55471515-55471534 Msa0557160:intron 40.0%
AAGAAAGAAATCCTGGACCA+AGG + chr4_1:55471738-55471757 Msa0557160:intron 40.0%
TGTAGATTGCTTCCAGAATG+CGG - chr4_1:55471793-55471812 None:intergenic 40.0%
TGGAAGCAATCTACAACTCA+GGG + chr4_1:55471798-55471817 Msa0557160:CDS 40.0%
TTTCAAAACCGCAAGTCCAA+AGG + chr4_1:55471911-55471930 Msa0557160:CDS 40.0%
!! TGTTTTTGCCTTTGGACTTG+CGG - chr4_1:55471922-55471941 None:intergenic 40.0%
!! GATGATGAAGATGGATTAGG+TGG - chr4_1:55472031-55472050 None:intergenic 40.0%
GGAGAGATTGTGGATGAATT+AGG - chr4_1:55472145-55472164 None:intergenic 40.0%
! TTGTAGATCGGTTTCAGCTA+CGG - chr4_1:55472200-55472219 None:intergenic 40.0%
GGGTTTAGGTAGTTGTAGAT+CGG - chr4_1:55472212-55472231 None:intergenic 40.0%
AACCGGGAAAGAGGAAAATT+GGG - chr4_1:55472233-55472252 None:intergenic 40.0%
ATGACATGACAACACTAGAG+GGG + chr4_1:55472284-55472303 Msa0557160:CDS 40.0%
GTGAGGGTTCAATCATATTC+GGG - chr4_1:55472330-55472349 None:intergenic 40.0%
GGTGAGGGTTCAATCATATT+CGG - chr4_1:55472331-55472350 None:intergenic 40.0%
CACCCAAAATTTCAAGCACA+AGG + chr4_1:55472668-55472687 Msa0557160:intron 40.0%
!!! TTGGTTTTCAGGTTTTGGTG+AGG + chr4_1:55472796-55472815 Msa0557160:intron 40.0%
GTTAACCTCGATTACTTCGT+TGG - chr4_1:55472855-55472874 None:intergenic 40.0%
AAGTAATCGAGGTTAACGCA+GGG + chr4_1:55472858-55472877 Msa0557160:CDS 40.0%
TGAGTGAACAACAGTTGCTT+AGG + chr4_1:55473102-55473121 Msa0557160:intron 40.0%
TAAAAAAGAGGATCCGCCAT+TGG + chr4_1:55473523-55473542 Msa0557160:intron 40.0%
TGAAGTGATAGGAAAAGAGG+GGG - chr4_1:55473569-55473588 None:intergenic 40.0%
GTGAAGTGATAGGAAAAGAG+GGG - chr4_1:55473570-55473589 None:intergenic 40.0%
GTGTGAAGTGATAGGAAAAG+AGG - chr4_1:55473572-55473591 None:intergenic 40.0%
TTATCAGCATGCGGTTGAAT+TGG + chr4_1:55474134-55474153 Msa0557160:intron 40.0%
! TGTTTTCGGCTTTCAAAGTG+TGG + chr4_1:55474361-55474380 Msa0557160:intron 40.0%
!! ATGAGGAGGAGATAATGGAA+CGG + chr4_1:55474466-55474485 Msa0557160:intron 40.0%
CTACTGAACTCAATCACTTG+CGG + chr4_1:55474741-55474760 Msa0557160:intron 40.0%
TGCAAAGGGGGTTACATTAA+GGG - chr4_1:55475371-55475390 None:intergenic 40.0%
ATGCAAAGGGGGTTACATTA+AGG - chr4_1:55475372-55475391 None:intergenic 40.0%
TGGGTGTTTAGATATAGGGA+CGG + chr4_1:55475612-55475631 Msa0557160:intron 40.0%
TGTTTAGATATAGGGACGGA+GGG + chr4_1:55475616-55475635 Msa0557160:intron 40.0%
TCTAGTTGTTAGACAGGGTT+TGG + chr4_1:55475809-55475828 Msa0557160:intron 40.0%
CTATCGGATGCTACACTTAA+TGG + chr4_1:55475950-55475969 Msa0557160:intron 40.0%
! ATTTAGAGTGGGATTTGGCT+AGG - chr4_1:55476064-55476083 None:intergenic 40.0%
CAAGTGTACCATATGCGATA+GGG + chr4_1:55476100-55476119 Msa0557160:intron 40.0%
GACATAAACCCTATCGCATA+TGG - chr4_1:55476111-55476130 None:intergenic 40.0%
AAGAAGAAGACATGGAACAC+AGG + chr4_1:55476246-55476265 Msa0557160:intron 40.0%
GAAGTCATGAAGTGATGCTA+AGG + chr4_1:55476289-55476308 Msa0557160:intron 40.0%
TGGTGTTTGTGATCTAATGG+CGG + chr4_1:55476474-55476493 Msa0557160:intron 40.0%
TGTTAGGGATGTGGAAGTTT+GGG - chr4_1:55476526-55476545 None:intergenic 40.0%
!! TTCGTTTCTAGCTGGTGTTA+GGG - chr4_1:55476541-55476560 None:intergenic 40.0%
!! TTTCGTTTCTAGCTGGTGTT+AGG - chr4_1:55476542-55476561 None:intergenic 40.0%
!! ATTGTCGTTTCGTTTCTAGC+TGG - chr4_1:55476549-55476568 None:intergenic 40.0%
AGCTAGAAACGAAACGACAA+TGG + chr4_1:55476548-55476567 Msa0557160:intron 40.0%
GTGAGACATAAAACTGCTTC+AGG - chr4_1:55476669-55476688 None:intergenic 40.0%
!!! CGGCTTTATTTTCCAACTCT+AGG - chr4_1:55477258-55477277 None:intergenic 40.0%
!! TGATTGCGTGGCTTTTGAAA+CGG - chr4_1:55477368-55477387 None:intergenic 40.0%
TGACATGCAATTTGATTGCG+TGG - chr4_1:55477380-55477399 None:intergenic 40.0%
GTTTGCACTCAGCTTTACAA+TGG - chr4_1:55477408-55477427 None:intergenic 40.0%
! CTCTGATGGTACTTTTGTTC+TGG - chr4_1:55477485-55477504 None:intergenic 40.0%
ATCTGTGTTCATGACTCTGA+TGG - chr4_1:55477499-55477518 None:intergenic 40.0%
! CAACTGTAATGTGGAGCATT+TGG - chr4_1:55477740-55477759 None:intergenic 40.0%
AACGTCTGACAACTGTAATG+TGG - chr4_1:55477749-55477768 None:intergenic 40.0%
! TTGGAATAAAGCTGGCCTAT+GGG - chr4_1:55477859-55477878 None:intergenic 40.0%
! TTTGGAATAAAGCTGGCCTA+TGG - chr4_1:55477860-55477879 None:intergenic 40.0%
AATTGCTAGTTACCACACCA+TGG - chr4_1:55478103-55478122 None:intergenic 40.0%
TGAACGAGTAGAAAATGGGA+GGG - chr4_1:55478296-55478315 None:intergenic 40.0%
TTGAACGAGTAGAAAATGGG+AGG - chr4_1:55478297-55478316 None:intergenic 40.0%
TTTCACGCAAGTATGATCGA+TGG - chr4_1:55478375-55478394 None:intergenic 40.0%
GCAAGTAAAGCTGACAAACA+TGG + chr4_1:55478440-55478459 Msa0557160:intron 40.0%
CACCAATGTACTTTCTTCGA+GGG - chr4_1:55478993-55479012 None:intergenic 40.0%
! CTCGAAGAAAGTACATTGGT+GGG + chr4_1:55478992-55479011 Msa0557160:intron 40.0%
AACCATTGAAGAGAGAAGAG+GGG - chr4_1:55479079-55479098 None:intergenic 40.0%
GAAACCATTGAAGAGAGAAG+AGG - chr4_1:55479081-55479100 None:intergenic 40.0%
GATGATGAAGAAAGAACTCC+TGG + chr4_1:55479649-55479668 Msa0557160:CDS 40.0%
TATAGATGGCTTCGAGAATG+CGG - chr4_1:55479711-55479730 None:intergenic 40.0%
TCGAAGCCATCTATAACTCA+GGG + chr4_1:55479716-55479735 Msa0557160:CDS 40.0%
AAGACGCTGGAATCACTAAT+CGG - chr4_1:55479802-55479821 None:intergenic 40.0%
! GTGATTCCAGCGTCTTTTAT+TGG + chr4_1:55479806-55479825 Msa0557160:CDS 40.0%
! GATGATGAAGATGAGTTGAG+TGG - chr4_1:55479943-55479962 None:intergenic 40.0%
CACCGTCCCATCATTAATAT+TGG - chr4_1:55479989-55480008 None:intergenic 40.0%
! TATTAATGATGGGACGGTGA+TGG + chr4_1:55479990-55480009 Msa0557160:CDS 40.0%
AGAGAGATTGCAGGTGAATT+AGG - chr4_1:55480018-55480037 None:intergenic 40.0%
!!! TTTTGGTTCAGAGAGATTGC+AGG - chr4_1:55480027-55480046 None:intergenic 40.0%
ATCTCTCTGAACCAAAACCA+AGG + chr4_1:55480030-55480049 Msa0557160:CDS 40.0%
TGTGAGGATAAGTATCACCT+TGG - chr4_1:55480050-55480069 None:intergenic 40.0%
! AAAGAGGAAAATGAGGGTGT+AGG - chr4_1:55480099-55480118 None:intergenic 40.0%
TAATGACATGATAAGGCCAG+AGG + chr4_1:55480155-55480174 Msa0557160:intron 40.0%
AATGACATGATAAGGCCAGA+GGG + chr4_1:55480156-55480175 Msa0557160:intron 40.0%
GAGAAGTAATTAAACCCCTC+TGG - chr4_1:55472301-55472320 None:intergenic 40.0%
! GGTAGGGATTGACTCATATT+TGG - chr4_1:55480204-55480223 None:intergenic 40.0%
TATGGTAACATCATGACCCA+TGG + chr4_1:55480249-55480268 Msa0557160:CDS 40.0%
AACATCATGACCCATGGAAA+TGG + chr4_1:55480255-55480274 Msa0557160:CDS 40.0%
ATGACCCATGGAAATGGAAA+TGG + chr4_1:55480261-55480280 Msa0557160:CDS 40.0%
AAGAGGAATGGAACATCATG+GGG - chr4_1:55480468-55480487 None:intergenic 40.0%
!! TTTTCAGGAAGTGACTAGCT+AGG - chr4_1:55480661-55480680 None:intergenic 40.0%
GCTAGTCACTTCCTGAAAAA+CGG + chr4_1:55480662-55480681 Msa0557160:intron 40.0%
!! GTCTAAACCTTCCGTTTTTC+AGG - chr4_1:55480676-55480695 None:intergenic 40.0%
!! ACCCGGTGCTTTAAATTTTG+GGG - chr4_1:55480745-55480764 None:intergenic 40.0%
TTGTTGTGTGTGTGTTTCTC+AGG + chr4_1:55480858-55480877 Msa0557160:intron 40.0%
! TGTGTGTGTTTCTCAGGTTT+TGG + chr4_1:55480864-55480883 Msa0557160:intron 40.0%
ACGATGGTACAGCAAAATGT+AGG + chr4_1:55480892-55480911 Msa0557160:CDS 40.0%
CGATGGTACAGCAAAATGTA+GGG + chr4_1:55480893-55480912 Msa0557160:CDS 40.0%
GGTACATTCGAAGTTAATGC+AGG + chr4_1:55480930-55480949 Msa0557160:CDS 40.0%
GTTCGTAAATTCTTTGGCGA+TGG + chr4_1:55480963-55480982 Msa0557160:CDS 40.0%
ACAGAGACTTCAGGTGAAAC+AGG - chr4_1:55467100-55467119 None:intergenic 45.0%
!! TTTTGGGTCACAGAGACTTC+AGG - chr4_1:55467109-55467128 None:intergenic 45.0%
!! CTTGAGACCTTGGTGGTTTT+GGG - chr4_1:55467125-55467144 None:intergenic 45.0%
! ATGTTAGCTTGAGACCTTGG+TGG - chr4_1:55467132-55467151 None:intergenic 45.0%
! GTGATGTTAGCTTGAGACCT+TGG - chr4_1:55467135-55467154 None:intergenic 45.0%
CACTTCCGTGACATTAAGGT+GGG + chr4_1:55467161-55467180 Msa0557160:intron 45.0%
CATAGCCCACCTTAATGTCA+CGG - chr4_1:55467169-55467188 None:intergenic 45.0%
!! GAAGTTGATGATCATGGTGG+TGG - chr4_1:55467361-55467380 None:intergenic 45.0%
!! GTGGAAGTTGATGATCATGG+TGG - chr4_1:55467364-55467383 None:intergenic 45.0%
!! AGGGTGGAAGTTGATGATCA+TGG - chr4_1:55467367-55467386 None:intergenic 45.0%
!! CGAAGGGTTTGTGATGGATA+AGG - chr4_1:55467387-55467406 None:intergenic 45.0%
AGGGTTGTTAAGGAAGCGAA+GGG - chr4_1:55467403-55467422 None:intergenic 45.0%
! GGTGTTGAGCTTGAATCAAC+CGG - chr4_1:55467476-55467495 None:intergenic 45.0%
!! TTAGTTACAGAGAAGCGTCG+CGG - chr4_1:55467570-55467589 None:intergenic 45.0%
!! AAAGAGGAAGTTGGTGCTGA+AGG - chr4_1:55467635-55467654 None:intergenic 45.0%
TTGTTCGGAGGTAAGTGTGA+TGG + chr4_1:55467707-55467726 Msa0557160:intron 45.0%
CACTTCCATGACATTAAGGC+GGG - chr4_1:55467933-55467952 None:intergenic 45.0%
CCACTTCCATGACATTAAGG+CGG - chr4_1:55467934-55467953 None:intergenic 45.0%
AAACGCAAGTGTAGGAGTAG+GGG - chr4_1:55468055-55468074 None:intergenic 45.0%
CAAACGCAAGTGTAGGAGTA+GGG - chr4_1:55468056-55468075 None:intergenic 45.0%
ACAAACGCAAGTGTAGGAGT+AGG - chr4_1:55468057-55468076 None:intergenic 45.0%
CCCGAAAACTTATCTGACGA+TGG - chr4_1:55469582-55469601 None:intergenic 45.0%
TTGTCATGCGTATACTTGGC+TGG + chr4_1:55469890-55469909 Msa0557160:intron 45.0%
! GCGTATACTTGGCTGGTTAA+TGG + chr4_1:55469897-55469916 Msa0557160:intron 45.0%
! GGCTGGTTAATGGAGGTTTA+CGG + chr4_1:55469907-55469926 Msa0557160:intron 45.0%
TGTACTGCATGCGGAGAAAA+AGG - chr4_1:55470487-55470506 None:intergenic 45.0%
GTATGTGTGTGTACTGCATG+CGG - chr4_1:55470496-55470515 None:intergenic 45.0%
CTGATCGATCGTTGATATGC+TGG - chr4_1:55471103-55471122 None:intergenic 45.0%
TGGTTGGAGTTCGACGAATT+TGG - chr4_1:55471176-55471195 None:intergenic 45.0%
AACCATTGAAGAGAGAGGAG+GGG - chr4_1:55471220-55471239 None:intergenic 45.0%
GAAACCATTGAAGAGAGAGG+AGG - chr4_1:55471222-55471241 None:intergenic 45.0%
CTGGAAGCAATCTACAACTC+AGG + chr4_1:55471797-55471816 Msa0557160:CDS 45.0%
! GTGATGCGAGTGTCTTTTAC+TGG + chr4_1:55471888-55471907 Msa0557160:CDS 45.0%
TTAGGAGCTGGATCTGCAAT+TGG - chr4_1:55471980-55471999 None:intergenic 45.0%
!! GATGAAGATGGATTAGGTGG+TGG - chr4_1:55472028-55472047 None:intergenic 45.0%
! AGAGGCTCTTTGGTGATTAG+AGG - chr4_1:55472056-55472075 None:intergenic 45.0%
TTTCATTGGGAGAGGCTCTT+TGG - chr4_1:55472066-55472085 None:intergenic 45.0%
!!! GTTTTGGTTCGGAGAGATTG+TGG - chr4_1:55472155-55472174 None:intergenic 45.0%
! ACCCCAATTTTCCTCTTTCC+CGG + chr4_1:55472228-55472247 Msa0557160:CDS 45.0%
ACCGGGAAAGAGGAAAATTG+GGG - chr4_1:55472232-55472251 None:intergenic 45.0%
CAACCGGGAAAGAGGAAAAT+TGG - chr4_1:55472234-55472253 None:intergenic 45.0%
ATGATTCTCAACCGGGAAAG+AGG - chr4_1:55472242-55472261 None:intergenic 45.0%
AACAGGTGCACTCATGTCAA+TGG - chr4_1:55472578-55472597 None:intergenic 45.0%
!! TCAGGTTTTGGTGAGGAAGA+TGG + chr4_1:55472803-55472822 Msa0557160:intron 45.0%
TACTGCCAACGAAGTAATCG+AGG + chr4_1:55472847-55472866 Msa0557160:CDS 45.0%
GAAGTAATCGAGGTTAACGC+AGG + chr4_1:55472857-55472876 Msa0557160:CDS 45.0%
CCATTCATCTGTTAGAACCG+GGG - chr4_1:55472942-55472961 None:intergenic 45.0%
CCCATTCATCTGTTAGAACC+GGG - chr4_1:55472943-55472962 None:intergenic 45.0%
! CCCGGTTCTAACAGATGAAT+GGG + chr4_1:55472940-55472959 Msa0557160:CDS 45.0%
CCCCATTCATCTGTTAGAAC+CGG - chr4_1:55472944-55472963 None:intergenic 45.0%
! CCGGTTCTAACAGATGAATG+GGG + chr4_1:55472941-55472960 Msa0557160:CDS 45.0%
! TCCATGGTAGAGTGAGTTGA+GGG - chr4_1:55472972-55472991 None:intergenic 45.0%
CCACGTAATAATCAGCTCCA+TGG - chr4_1:55472988-55473007 None:intergenic 45.0%
CCATGGAGCTGATTATTACG+TGG + chr4_1:55472985-55473004 Msa0557160:intron 45.0%
TTCGGCTTTCAAAGTGTGGA+CGG + chr4_1:55474365-55474384 Msa0557160:intron 45.0%
!! AGGAGATAATGGAACGGCTA+GGG + chr4_1:55474472-55474491 Msa0557160:intron 45.0%
TTGCAGTTGCTGAACTTCAG+AGG + chr4_1:55474885-55474904 Msa0557160:intron 45.0%
CTGAACTTCAGAGGAGGATA+CGG + chr4_1:55474894-55474913 Msa0557160:intron 45.0%
ACGTTGCTTCTTCGTGATGA+TGG + chr4_1:55474923-55474942 Msa0557160:intron 45.0%
CGTTGCTTCTTCGTGATGAT+GGG + chr4_1:55474924-55474943 Msa0557160:intron 45.0%
AAGGGGGTTACATTAAGGGA+CGG - chr4_1:55475367-55475386 None:intergenic 45.0%
GTGTTTAGATATAGGGACGG+AGG + chr4_1:55475615-55475634 Msa0557160:intron 45.0%
CCTATCGCATATGGTACACT+TGG - chr4_1:55476102-55476121 None:intergenic 45.0%
CCAAGTGTACCATATGCGAT+AGG + chr4_1:55476099-55476118 Msa0557160:intron 45.0%
AATTGCAAGCGGATGTCAAG+AGG + chr4_1:55476438-55476457 Msa0557160:intron 45.0%
GTGTTAGGGATGTGGAAGTT+TGG - chr4_1:55476527-55476546 None:intergenic 45.0%
ATTGGTCGAGTCTTGATCCT+AGG + chr4_1:55476591-55476610 Msa0557160:intron 45.0%
! AAGAGCATGAGCAACCTCAT+TGG + chr4_1:55477210-55477229 Msa0557160:intron 45.0%
!! ACTCTAGGGTGGAGTTTGTT+AGG - chr4_1:55477243-55477262 None:intergenic 45.0%
AACAAACTCCACCCTAGAGT+TGG + chr4_1:55477243-55477262 Msa0557160:intron 45.0%
AGGAAAGACACATCCGAATC+TGG - chr4_1:55477310-55477329 None:intergenic 45.0%
CACAGATGCCAATACCTCTT+CGG + chr4_1:55477512-55477531 Msa0557160:intron 45.0%
CATTTATATCTCCCCGCCAT+AGG + chr4_1:55477568-55477587 Msa0557160:intron 45.0%
CTTCCCAAACTCGAAGATTG+CGG + chr4_1:55477709-55477728 Msa0557160:intron 45.0%
! ACACCGCAATCTTCGAGTTT+GGG - chr4_1:55477715-55477734 None:intergenic 45.0%
! AACACCGCAATCTTCGAGTT+TGG - chr4_1:55477716-55477735 None:intergenic 45.0%
CGTGTTGAATAGAACCCCAT+AGG + chr4_1:55477841-55477860 Msa0557160:intron 45.0%
! TGGAATAAAGCTGGCCTATG+GGG - chr4_1:55477858-55477877 None:intergenic 45.0%
!! GTCCGTTTGCTATACAGGTT+TGG - chr4_1:55477878-55477897 None:intergenic 45.0%
!! CTCTTGTCCGTTTGCTATAC+AGG - chr4_1:55477883-55477902 None:intergenic 45.0%
!! GGTTTCTTGGATTGACTCGA+GGG - chr4_1:55478241-55478260 None:intergenic 45.0%
TCGATGGAAGAGAAGAGAAG+AGG - chr4_1:55478359-55478378 None:intergenic 45.0%
GGATGAATCGATGGAAGAGA+AGG - chr4_1:55478738-55478757 None:intergenic 45.0%
!! AGCAATGGTGGATGAATCGA+TGG - chr4_1:55478747-55478766 None:intergenic 45.0%
! CTCCCTCGAAGAAAGTACAT+TGG + chr4_1:55478988-55479007 Msa0557160:intron 45.0%
CCACCAATGTACTTTCTTCG+AGG - chr4_1:55478994-55479013 None:intergenic 45.0%
! CCTCGAAGAAAGTACATTGG+TGG + chr4_1:55478991-55479010 Msa0557160:intron 45.0%
! AGAAAGTACATTGGTGGGAC+AGG + chr4_1:55478997-55479016 Msa0557160:intron 45.0%
CGTTTATATGACCCCCAACA+AGG - chr4_1:55479243-55479262 None:intergenic 45.0%
AAGAAAGAACTCCTGGACCA+AGG + chr4_1:55479656-55479675 Msa0557160:CDS 45.0%
CTCGAAGCCATCTATAACTC+AGG + chr4_1:55479715-55479734 Msa0557160:CDS 45.0%
CGTCATCCCTGAGTTATAGA+TGG - chr4_1:55479725-55479744 None:intergenic 45.0%
ATTTGTGGGAGAGAGCTATC+TGG - chr4_1:55479910-55479929 None:intergenic 45.0%
! GATGAAGATGAGTTGAGTGG+TGG - chr4_1:55479940-55479959 None:intergenic 45.0%
! ACCCTCATTTTCCTCTTTCC+CGG + chr4_1:55480101-55480120 Msa0557160:intron 45.0%
ACCGGGAAAGAGGAAAATGA+GGG - chr4_1:55480105-55480124 None:intergenic 45.0%
AACCGGGAAAGAGGAAAATG+AGG - chr4_1:55480106-55480125 None:intergenic 45.0%
ATGATTCTCAACCGGGAAAG+AGG - chr4_1:55472242-55472261 None:intergenic 45.0%
ATGACATGATAAGGCCAGAG+GGG + chr4_1:55480157-55480176 Msa0557160:intron 45.0%
ATGGGGTGCACTATTGTCAA+TGG - chr4_1:55480451-55480470 None:intergenic 45.0%
GTCACTTCCTGAAAAACGGA+AGG + chr4_1:55480666-55480685 Msa0557160:intron 45.0%
!! CCGGTGCTTTAAATTTTGGG+GGG - chr4_1:55480743-55480762 None:intergenic 45.0%
! CCCCCCAAAATTTAAAGCAC+CGG + chr4_1:55480740-55480759 Msa0557160:intron 45.0%
!! CCCGGTGCTTTAAATTTTGG+GGG - chr4_1:55480744-55480763 None:intergenic 45.0%
! CCCCCAAAATTTAAAGCACC+GGG + chr4_1:55480741-55480760 Msa0557160:intron 45.0%
!! GTGTTTCTCAGGTTTTGGTG+AGG + chr4_1:55480869-55480888 Msa0557160:intron 45.0%
!!! TACTAATAATTTATATTTTT+TGG - chr4_1:55469193-55469212 None:intergenic 5.0%
!! TAATAATAATAATAATTAGA+AGG - chr4_1:55479113-55479132 None:intergenic 5.0%
TCTGTGACCCAAAACCACCA+AGG + chr4_1:55467115-55467134 Msa0557160:intron 50.0%
!! GCTTGAGACCTTGGTGGTTT+TGG - chr4_1:55467126-55467145 None:intergenic 50.0%
CCACCTTAATGTCACGGAAG+TGG - chr4_1:55467163-55467182 None:intergenic 50.0%
CCACTTCCGTGACATTAAGG+TGG + chr4_1:55467160-55467179 Msa0557160:intron 50.0%
!! TGATGATCATGGTGGTGGTG+TGG - chr4_1:55467356-55467375 None:intergenic 50.0%
!! GGGTTTGTGATGGATAAGGG+TGG - chr4_1:55467383-55467402 None:intergenic 50.0%
AGGAAGCGAAGGGTTTGTGA+TGG - chr4_1:55467393-55467412 None:intergenic 50.0%
GAGGGTTGTTAAGGAAGCGA+AGG - chr4_1:55467404-55467423 None:intergenic 50.0%
GAAGGATGCGAGGGTTGTTA+AGG - chr4_1:55467413-55467432 None:intergenic 50.0%
CTTCGGCCATTGTCGAAAAG+AGG - chr4_1:55467651-55467670 None:intergenic 50.0%
TTCGACAATGGCCGAAGCAA+AGG + chr4_1:55467654-55467673 Msa0557160:intron 50.0%
ACGGAGGAGTAGACATCTTG+CGG + chr4_1:55467681-55467700 Msa0557160:intron 50.0%
GACATCTTGCGGCTCTTGTT+CGG + chr4_1:55467692-55467711 Msa0557160:intron 50.0%
TTCGGAGGTAAGTGTGATGG+CGG + chr4_1:55467710-55467729 Msa0557160:intron 50.0%
TGTGTGAGGGAGGAAGCTTA+TGG + chr4_1:55467800-55467819 Msa0557160:intron 50.0%
!! AGGAAGCTTATGGTGGTGGA+CGG + chr4_1:55467810-55467829 Msa0557160:intron 50.0%
CATAGCCCGCCTTAATGTCA+TGG + chr4_1:55467925-55467944 Msa0557160:intron 50.0%
CCGCCTTAATGTCATGGAAG+TGG + chr4_1:55467931-55467950 Msa0557160:intron 50.0%
ATTAGATCGGACGTCGTGAC+CGG + chr4_1:55468021-55468040 Msa0557160:intron 50.0%
ATACTTGGCGGGGTCTTTCA+TGG + chr4_1:55469620-55469639 Msa0557160:intron 50.0%
TACTTGGCGGGGTCTTTCAT+GGG + chr4_1:55469621-55469640 Msa0557160:intron 50.0%
GGGGTGAACTATGATCCACT+TGG + chr4_1:55469646-55469665 Msa0557160:intron 50.0%
TGGGCAACTACACAACCTTG+CGG - chr4_1:55469763-55469782 None:intergenic 50.0%
AACCCCTCCTCTCTCTTCAA+TGG + chr4_1:55471215-55471234 Msa0557160:intron 50.0%
! TTTGGGTTCCATCTTGGCCT+TGG - chr4_1:55471758-55471777 None:intergenic 50.0%
!! TCAGGCTTTGGGTTCCATCT+TGG - chr4_1:55471764-55471783 None:intergenic 50.0%
! TGCGGATTTGCTCAGGCTTT+GGG - chr4_1:55471775-55471794 None:intergenic 50.0%
! ATGCGGATTTGCTCAGGCTT+TGG - chr4_1:55471776-55471795 None:intergenic 50.0%
! TCCAGAATGCGGATTTGCTC+AGG - chr4_1:55471782-55471801 None:intergenic 50.0%
GGGAGAGAGTTATTAGGAGC+TGG - chr4_1:55471992-55472011 None:intergenic 50.0%
!! ATGGATTAGGTGGTGGTGGT+GGG - chr4_1:55472021-55472040 None:intergenic 50.0%
!! GAAGATGGATTAGGTGGTGG+TGG - chr4_1:55472025-55472044 None:intergenic 50.0%
TGATCTTGCTCCTCTACCTC+CGG + chr4_1:55472552-55472571 Msa0557160:CDS 50.0%
TGCACATTGCACACGTCCAT+GGG - chr4_1:55472715-55472734 None:intergenic 50.0%
ATGCACATTGCACACGTCCA+TGG - chr4_1:55472716-55472735 None:intergenic 50.0%
ATGGACGTGTGCAATGTGCA+TGG + chr4_1:55472715-55472734 Msa0557160:intron 50.0%
GTTTGACTCCTTCTGTACCC+CGG + chr4_1:55472922-55472941 Msa0557160:CDS 50.0%
TGTTAGAACCGGGGTACAGA+AGG - chr4_1:55472933-55472952 None:intergenic 50.0%
! CCCCGGTTCTAACAGATGAA+TGG + chr4_1:55472939-55472958 Msa0557160:CDS 50.0%
ACCCTCAACTCACTCTACCA+TGG + chr4_1:55472968-55472987 Msa0557160:intron 50.0%
CTCCATGGTAGAGTGAGTTG+AGG - chr4_1:55472973-55472992 None:intergenic 50.0%
TCGGCTTTCAAAGTGTGGAC+GGG + chr4_1:55474366-55474385 Msa0557160:intron 50.0%
!! GAGGAGATAATGGAACGGCT+AGG + chr4_1:55474471-55474490 Msa0557160:intron 50.0%
CAGTTGCTGAACTTCAGAGG+AGG + chr4_1:55474888-55474907 Msa0557160:intron 50.0%
AACTTCAGAGGAGGATACGG+AGG + chr4_1:55474897-55474916 Msa0557160:intron 50.0%
ACTTCAGAGGAGGATACGGA+GGG + chr4_1:55474898-55474917 Msa0557160:intron 50.0%
GGGTTACATTAAGGGACGGA+GGG - chr4_1:55475363-55475382 None:intergenic 50.0%
TGGTACACTTGGACCCATGA+TGG - chr4_1:55476091-55476110 None:intergenic 50.0%
GGATGTCAAGAGGTCTGCAA+AGG + chr4_1:55476448-55476467 Msa0557160:intron 50.0%
CAAGAGGTCTGCAAAGGACA+TGG + chr4_1:55476454-55476473 Msa0557160:intron 50.0%
!! AATGGCGGATGACATTTGCG+AGG + chr4_1:55476489-55476508 Msa0557160:intron 50.0%
! TCTAGCTGGTGTTAGGGATG+TGG - chr4_1:55476535-55476554 None:intergenic 50.0%
AGTCTTGATCCTAGGCATGC+TGG + chr4_1:55476599-55476618 Msa0557160:intron 50.0%
TGTTAGGCGACAAGCCAATG+AGG - chr4_1:55477227-55477246 None:intergenic 50.0%
TGCCAATACCTCTTCGGTTG+AGG + chr4_1:55477518-55477537 Msa0557160:intron 50.0%
GCCAATACCTCTTCGGTTGA+GGG + chr4_1:55477519-55477538 Msa0557160:intron 50.0%
! TCCCTCAACCGAAGAGGTAT+TGG - chr4_1:55477523-55477542 None:intergenic 50.0%
AATACCTCTTCGGTTGAGGG+AGG + chr4_1:55477522-55477541 Msa0557160:intron 50.0%
TTATATCTCCCCGCCATAGG+AGG + chr4_1:55477571-55477590 Msa0557160:intron 50.0%
CCTCACCTAATGGTCGAAAG+TGG - chr4_1:55477600-55477619 None:intergenic 50.0%
CCACTTTCGACCATTAGGTG+AGG + chr4_1:55477597-55477616 Msa0557160:intron 50.0%
! AGTCGTCATTGCCACTTGAG+GGG - chr4_1:55477639-55477658 None:intergenic 50.0%
! CAGTCGTCATTGCCACTTGA+GGG - chr4_1:55477640-55477659 None:intergenic 50.0%
TTCATGATCTGATGCGCAGC+TGG + chr4_1:55477923-55477942 Msa0557160:intron 50.0%
!! GGGTTTCTTGGATTGACTCG+AGG - chr4_1:55478242-55478261 None:intergenic 50.0%
AGTAGAAAATGGGAGGGTGG+AGG - chr4_1:55478290-55478309 None:intergenic 50.0%
ACGAGTAGAAAATGGGAGGG+TGG - chr4_1:55478293-55478312 None:intergenic 50.0%
AGTGTGTGTGCTAGCAATGG+TGG - chr4_1:55478759-55478778 None:intergenic 50.0%
GCAAGTGTGTGTGCTAGCAA+TGG - chr4_1:55478762-55478781 None:intergenic 50.0%
CTCCCCTCTTCTCTCTTCAA+TGG + chr4_1:55479074-55479093 Msa0557160:intron 50.0%
! TTTGGGATCCATCTTGGCCT+TGG - chr4_1:55479676-55479695 None:intergenic 50.0%
!! TCAGGCTTTGGGATCCATCT+TGG - chr4_1:55479682-55479701 None:intergenic 50.0%
! TGCGGATTTGCTCAGGCTTT+GGG - chr4_1:55471775-55471794 None:intergenic 50.0%
! ATGCGGATTTGCTCAGGCTT+TGG - chr4_1:55471776-55471795 None:intergenic 50.0%
! TCGAGAATGCGGATTTGCTC+AGG - chr4_1:55479700-55479719 None:intergenic 50.0%
! GTGGTGGTGTGGTGATTTGT+GGG - chr4_1:55479924-55479943 None:intergenic 50.0%
! AGTGGTGGTGTGGTGATTTG+TGG - chr4_1:55479925-55479944 None:intergenic 50.0%
! AGATGAGTTGAGTGGTGGTG+TGG - chr4_1:55479935-55479954 None:intergenic 50.0%
ACTTATCCTCACACCCTCAC+TGG + chr4_1:55480057-55480076 Msa0557160:CDS 50.0%
! TTGTAGACCGGTTCCAGTGA+GGG - chr4_1:55480073-55480092 None:intergenic 50.0%
GGGTGTAGGTAGTTGTAGAC+CGG - chr4_1:55480085-55480104 None:intergenic 50.0%
CACTATTGTCAATGGCCGGA+GGG - chr4_1:55480443-55480462 None:intergenic 50.0%
GGTGCACTATTGTCAATGGC+CGG - chr4_1:55480447-55480466 None:intergenic 50.0%
!! TCAGGTTTTGGTGAGGACGA+TGG + chr4_1:55480876-55480895 Msa0557160:intron 50.0%
GCAGTTCTACTTGACTCCTC+CGG + chr4_1:55480987-55481006 Msa0557160:CDS 50.0%
ATCAGTTAGAACCGGGACAC+CGG - chr4_1:55481009-55481028 None:intergenic 50.0%
! TCCCGGTTCTAACTGATGAG+TGG + chr4_1:55481012-55481031 Msa0557160:CDS 50.0%
CCCACTCATCAGTTAGAACC+GGG - chr4_1:55481016-55481035 None:intergenic 50.0%
! CCCGGTTCTAACTGATGAGT+GGG + chr4_1:55481013-55481032 Msa0557160:CDS 50.0%
CCCCACTCATCAGTTAGAAC+CGG - chr4_1:55481017-55481036 None:intergenic 50.0%
! CCGGTTCTAACTGATGAGTG+GGG + chr4_1:55481014-55481033 Msa0557160:CDS 50.0%
GGAAATAATCAGCCCCATGG+TGG - chr4_1:55481058-55481077 None:intergenic 50.0%
TGCACTGGAGAAGGATGCGA+GGG - chr4_1:55467422-55467441 None:intergenic 55.0%
TTGCACTGGAGAAGGATGCG+AGG - chr4_1:55467423-55467442 None:intergenic 55.0%
TGGCCGAAGCAAAGGCTTGA+CGG + chr4_1:55467662-55467681 Msa0557160:intron 55.0%
CCTCCGTCAAGCCTTTGCTT+CGG - chr4_1:55467668-55467687 None:intergenic 55.0%
ATCTTGCGGCTCTTGTTCGG+AGG + chr4_1:55467695-55467714 Msa0557160:intron 55.0%
TCGGAGGTAAGTGTGATGGC+GGG + chr4_1:55467711-55467730 Msa0557160:intron 55.0%
GGGTTTGTGATGTGTGAGGG+AGG + chr4_1:55467790-55467809 Msa0557160:intron 55.0%
GTGAGGGAGGAAGCTTATGG+TGG + chr4_1:55467803-55467822 Msa0557160:intron 55.0%
AGGGAGGAAGCTTATGGTGG+TGG + chr4_1:55467806-55467825 Msa0557160:intron 55.0%
GCCACATGGCACGTTCTGAT+TGG + chr4_1:55467889-55467908 Msa0557160:intron 55.0%
GCCAATCAGAACGTGCCATG+TGG - chr4_1:55467893-55467912 None:intergenic 55.0%
TTAGATCGGACGTCGTGACC+GGG + chr4_1:55468022-55468041 Msa0557160:intron 55.0%
AGGAGTAGGGGTTAGAGTCC+CGG - chr4_1:55468043-55468062 None:intergenic 55.0%
GTGGTTAGAACCCTGACCCT+CGG + chr4_1:55468251-55468270 Msa0557160:intron 55.0%
ATCCTGGACCAAGGCCAAGA+TGG + chr4_1:55471747-55471766 Msa0557160:CDS 55.0%
!! TTCCATCTTGGCCTTGGTCC+AGG - chr4_1:55471752-55471771 None:intergenic 55.0%
GCCTGAGCAAATCCGCATTC+TGG + chr4_1:55471778-55471797 Msa0557160:CDS 55.0%
!! GTGGTGGTGGTGGGATTTGT+GGG - chr4_1:55472012-55472031 None:intergenic 55.0%
!! GATGGATTAGGTGGTGGTGG+TGG - chr4_1:55472022-55472041 None:intergenic 55.0%
ATGTCAATGGCCGGAGGTAG+AGG - chr4_1:55472565-55472584 None:intergenic 55.0%
GGTGCACTCATGTCAATGGC+CGG - chr4_1:55472574-55472593 None:intergenic 55.0%
GGGGTTACATTAAGGGACGG+AGG - chr4_1:55475364-55475383 None:intergenic 55.0%
GGACGGAGGGAGTAGATCTT+AGG + chr4_1:55475629-55475648 Msa0557160:intron 55.0%
TCATGATGGCCAGCATGCCT+AGG - chr4_1:55476611-55476630 None:intergenic 55.0%
AGGGGGACTACCTAGTAACG+TGG + chr4_1:55477177-55477196 Msa0557160:intron 55.0%
GCACGAGAAGCCACGTTACT+AGG - chr4_1:55477190-55477209 None:intergenic 55.0%
GTTGATGTGCGCGAAGCTCT+TGG - chr4_1:55477430-55477449 None:intergenic 55.0%
AAAGTGGCAGCCTCCTATGG+CGG - chr4_1:55477584-55477603 None:intergenic 55.0%
TCGAAAGTGGCAGCCTCCTA+TGG - chr4_1:55477587-55477606 None:intergenic 55.0%
!! GGCTGCCACTTTCGACCATT+AGG + chr4_1:55477592-55477611 Msa0557160:intron 55.0%
ACCATTAGGTGAGGCCGAAG+TGG + chr4_1:55477606-55477625 Msa0557160:intron 55.0%
TCCACTTCGGCCTCACCTAA+TGG - chr4_1:55477610-55477629 None:intergenic 55.0%
TTAGGTGAGGCCGAAGTGGA+AGG + chr4_1:55477610-55477629 Msa0557160:intron 55.0%
! TCGTCATTGCCACTTGAGGG+GGG - chr4_1:55477637-55477656 None:intergenic 55.0%
! GTCGTCATTGCCACTTGAGG+GGG - chr4_1:55477638-55477657 None:intergenic 55.0%
! CCAGTCGTCATTGCCACTTG+AGG - chr4_1:55477641-55477660 None:intergenic 55.0%
CCTCAAGTGGCAATGACGAC+TGG + chr4_1:55477638-55477657 Msa0557160:intron 55.0%
!! ATCCATCTTGGCCTTGGTCC+AGG - chr4_1:55479670-55479689 None:intergenic 55.0%
! GTTGTAGACCGGTTCCAGTG+AGG - chr4_1:55480074-55480093 None:intergenic 55.0%
TGATCTTGCTCCTCTCCCTC+CGG + chr4_1:55480425-55480444 Msa0557160:intron 55.0%
GCACTATTGTCAATGGCCGG+AGG - chr4_1:55480444-55480463 None:intergenic 55.0%
ACCCTCAACTCTCTCCACCA+TGG + chr4_1:55481041-55481060 Msa0557160:CDS 55.0%
! CCCATGGTGGAGAGAGTTGA+GGG - chr4_1:55481045-55481064 None:intergenic 55.0%
CCCTCAACTCTCTCCACCAT+GGG + chr4_1:55481042-55481061 Msa0557160:CDS 55.0%
CCTCAACTCTCTCCACCATG+GGG + chr4_1:55481043-55481062 Msa0557160:CDS 55.0%
GCCAATCAGAACGTGCCACG+TGG + chr4_1:55467201-55467220 Msa0557160:intron 60.0%
GCCACGTGGCACGTTCTGAT+TGG - chr4_1:55467205-55467224 None:intergenic 60.0%
!! GTTACAGAGAAGCGTCGCGG+CGG - chr4_1:55467567-55467586 None:intergenic 60.0%
CCGAAGCAAAGGCTTGACGG+AGG + chr4_1:55467665-55467684 Msa0557160:intron 60.0%
! CGGAGGTAAGTGTGATGGCG+GGG + chr4_1:55467712-55467731 Msa0557160:intron 60.0%
TGGCGGGGTCTTTCATGGGT+TGG + chr4_1:55469625-55469644 Msa0557160:intron 60.0%
GGCGGGGTCTTTCATGGGTT+GGG + chr4_1:55469626-55469645 Msa0557160:intron 60.0%
! GCGGGGTCTTTCATGGGTTG+GGG + chr4_1:55469627-55469646 Msa0557160:intron 60.0%
!! GGTGGTGGTGGTGGGATTTG+TGG - chr4_1:55472013-55472032 None:intergenic 60.0%
GCACTCATGTCAATGGCCGG+AGG - chr4_1:55472571-55472590 None:intergenic 60.0%
ACCTCTTCGGTTGAGGGAGG+CGG + chr4_1:55477525-55477544 Msa0557160:intron 60.0%
AAGTGGCAGCCTCCTATGGC+GGG - chr4_1:55477583-55477602 None:intergenic 60.0%
TGAGGGGGGACCTTCCACTT+CGG - chr4_1:55477623-55477642 None:intergenic 60.0%
TGATGCGCAGCTGGCGCAAT+TGG + chr4_1:55477932-55477951 Msa0557160:intron 60.0%
CTCCTGGACCAAGGCCAAGA+TGG + chr4_1:55479665-55479684 Msa0557160:CDS 60.0%
CCTCACACCCTCACTGGAAC+CGG + chr4_1:55480063-55480082 Msa0557160:CDS 60.0%
TTGTCAATGGCCGGAGGGAG+AGG - chr4_1:55480438-55480457 None:intergenic 60.0%
ACTTGACTCCTCCGGTGTCC+CGG + chr4_1:55480995-55481014 Msa0557160:CDS 60.0%
AGTTAGAACCGGGACACCGG+AGG - chr4_1:55481006-55481025 None:intergenic 60.0%
! CCCCATGGTGGAGAGAGTTG+AGG - chr4_1:55481046-55481065 None:intergenic 60.0%
CGGCGAAAATGCGGCGGTGA+TGG - chr4_1:55467547-55467566 None:intergenic 65.0%
TCCGCCTCCCTCAACCGAAG+AGG - chr4_1:55477529-55477548 None:intergenic 65.0%
AGTGGCAGCCTCCTATGGCG+GGG - chr4_1:55477582-55477601 None:intergenic 65.0%
GTGGAAGGTCCCCCCTCAAG+TGG + chr4_1:55477625-55477644 Msa0557160:intron 65.0%
GCGCAGCTGGCGCAATTGGT+AGG + chr4_1:55477936-55477955 Msa0557160:intron 65.0%
! CCGGTTCCAGTGAGGGTGTG+AGG - chr4_1:55480066-55480085 None:intergenic 65.0%
TCGCGGCGGCGAAAATGCGG+CGG - chr4_1:55467553-55467572 None:intergenic 70.0%
GCGTCGCGGCGGCGAAAATG+CGG - chr4_1:55467556-55467575 None:intergenic 70.0%
!! GATGGCGGGGTGCTCGTGAG+TGG + chr4_1:55467725-55467744 Msa0557160:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 55467088 55481079 55467088 ID=Msa0557160;Name=Msa0557160
chr4_1 mRNA 55467088 55481079 55467088 ID=Msa0557160-mRNA-1;Parent=Msa0557160;Name=Msa0557160-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|0.33|0.14|7|0|639
chr4_1 exon 55467088 55467092 55467088 ID=Msa0557160-mRNA-1:exon:16554;Parent=Msa0557160-mRNA-1
chr4_1 exon 55471745 55472634 55471745 ID=Msa0557160-mRNA-1:exon:16555;Parent=Msa0557160-mRNA-1
chr4_1 exon 55472807 55472962 55472807 ID=Msa0557160-mRNA-1:exon:16556;Parent=Msa0557160-mRNA-1
chr4_1 exon 55479644 55479842 55479644 ID=Msa0557160-mRNA-1:exon:16557;Parent=Msa0557160-mRNA-1
chr4_1 exon 55479849 55480084 55479849 ID=Msa0557160-mRNA-1:exon:16558;Parent=Msa0557160-mRNA-1
chr4_1 exon 55480175 55480405 55480175 ID=Msa0557160-mRNA-1:exon:16559;Parent=Msa0557160-mRNA-1
chr4_1 exon 55480880 55481079 55480880 ID=Msa0557160-mRNA-1:exon:16560;Parent=Msa0557160-mRNA-1
chr4_1 CDS 55467088 55467092 55467088 ID=Msa0557160-mRNA-1:cds;Parent=Msa0557160-mRNA-1
chr4_1 CDS 55471745 55472634 55471745 ID=Msa0557160-mRNA-1:cds;Parent=Msa0557160-mRNA-1
chr4_1 CDS 55472807 55472962 55472807 ID=Msa0557160-mRNA-1:cds;Parent=Msa0557160-mRNA-1
chr4_1 CDS 55479644 55479842 55479644 ID=Msa0557160-mRNA-1:cds;Parent=Msa0557160-mRNA-1
chr4_1 CDS 55479849 55480084 55479849 ID=Msa0557160-mRNA-1:cds;Parent=Msa0557160-mRNA-1
chr4_1 CDS 55480175 55480405 55480175 ID=Msa0557160-mRNA-1:cds;Parent=Msa0557160-mRNA-1
chr4_1 CDS 55480880 55481079 55480880 ID=Msa0557160-mRNA-1:cds;Parent=Msa0557160-mRNA-1
Gene Sequence

>Msa0557160

ATGTTAAATCCTGGACCAAGGCCAAGATGGAACCCAAAGCCTGAGCAAATCCGCATTCTGGAAGCAATCTACAACTCAGGGATGAAGAATCCACCTGTAGATGAAATCAAGAAGATACGTGAACAATTAGAAGAATTTGGGAAAATTGGTGATGCGAGTGTCTTTTACTGGTTTCAAAACCGCAAGTCCAAAGGCAAAAACAAAAAAGCACCCTACCCCAAGAAATCAAAAAGACAACCAATTGCAGATCCAGCTCCTAATAACTCTCTCCCACAAATCCCACCACCACCACCTAATCCATCTTCATCATCTTCCTCTAATCACCAAAGAGCCTCTCCCAATGAAATCACAATATCTAACAATATTGGAATCTCCAATATTAATGATGGGAGAGTGTTGGTGCCTAATTCATCCACAATCTCTCCGAACCAAAACCAAGATGATACTTATTCTCACACCGTAGCTGAAACCGATCTACAACTACCTAAACCCCAATTTTCCTCTTTCCCGGTTGAGAATCATATCAATGAAGGGGTAGTGCTTAATGACATGACAACACTAGAGGGGTTTAATTACTTCTCTGATTTCCCGAATATGATTGAACCCTCACCTCAACAAAATGTTGATCTTCCTGTGCTTAATTATGATAACATCATGAACAATGAAAATGAAAATGGAATCTGCTCAACCAATGATCTTTTTTATCAAGAGAATGTTCAAGAGGAAGCGATGAATATGATGCACATGCACCAACAAGACCCGCAATTTAATTTTGGTGTCACAACAGCATCAAGTAATGATGATCATTCAACTGATCTTGCTCCTCTACCTCCGGCCATTGACATGAGTGCACCTGTTGATATTCCATTCCTTTTTACCGATGATCAACTTCAAGGTTTTGGTGAGGAAGATGGTCTGAGAAAATGTAGAATTTTTACTGCCAACGAAGTAATCGAGGTTAACGCAGGGCCCTTTAACGTTCGTGAATCCTTTGGTAATAGAGTAGTTCTGTTTGACTCCTTCTGTACCCCGGTTCTAACAGATGAATGGGGTGGAGATGATGAAGAAAGAACTCCTGGACCAAGGCCAAGATGGATCCCAAAGCCTGAGCAAATCCGCATTCTCGAAGCCATCTATAACTCAGGGATGACGAATCCACGTAGAGATGAGATTAAGAAGATACGTGGACAATTAGAAGAATTTGGGCCGATTAGTGATTCCAGCGTCTTTTATTGGTTTCAAAATCGCAAAAGCAAAACCAACAAAGTACCCTATAACAAGAAACAGGAAACACAACAAAACGCAGCTCCAGATAGCTCTCTCCCACAAATCACCACACCACCACTCAACTCATCTTCATCATCTTCCTCTAACAATATTGGAATCTCCAATATTAATGATGGGACGGTGATGGTGCCTAATTCACCTGCAATCTCTCTGAACCAAAACCAAGGTGATACTTATCCTCACACCCTCACTGGAACCGAGGGGTTTAATTACTTCTCTGATTTTCCAAATATGAGTCAATCCCTACCTCAAGAAAATGTTGATCTGCTTAATTATGGTAACATCATGACCCATGGAAATGGAAATGGAAATGGAAACTGCTCAATCAATGACCTTTTTTATCAAGAGAATATTCAAGAGGAGTCGATTAATATGATGCATATGCACCAACAAGACCCACAACTTAATTTTGGTGTCATGACAGCTTCAAGTTTTGGTGAGGACGATGGTACAGCAAAATGTAGGGTGATTACTATCAACGGTACATTCGAAGTTAATGCAGGGCCGTTTAACGTTCGTAAATTCTTTGGCGATGGAGCAGTTCTACTTGACTCCTCCGGTGTCCCGGTTCTAACTGATGAGTGGGGTGTCACCCTCAACTCTCTCCACCATGGGGCTGATTATTTCCTG
Protein sequence

>Msa0557160

MLNPGPRPRWNPKPEQIRILEAIYNSGMKNPPVDEIKKIREQLEEFGKIGDASVFYWFQNRKSKGKNKKAPYPKKSKRQPIADPAPNNSLPQIPPPPPNPSSSSSSNHQRASPNEITISNNIGISNINDGRVLVPNSSTISPNQNQDDTYSHTVAETDLQLPKPQFSSFPVENHINEGVVLNDMTTLEGFNYFSDFPNMIEPSPQQNVDLPVLNYDNIMNNENENGICSTNDLFYQENVQEEAMNMMHMHQQDPQFNFGVTTASSNDDHSTDLAPLPPAIDMSAPVDIPFLFTDDQLQGFGEEDGLRKCRIFTANEVIEVNAGPFNVRESFGNRVVLFDSFCTPVLTDEWGGDDEERTPGPRPRWIPKPEQIRILEAIYNSGMTNPRRDEIKKIRGQLEEFGPISDSSVFYWFQNRKSKTNKVPYNKKQETQQNAAPDSSLPQITTPPLNSSSSSSSNNIGISNINDGTVMVPNSPAISLNQNQGDTYPHTLTGTEGFNYFSDFPNMSQSLPQENVDLLNYGNIMTHGNGNGNGNCSINDLFYQENIQEESINMMHMHQQDPQLNFGVMTASSFGEDDGTAKCRVITINGTFEVNAGPFNVRKFFGDGAVLLDSSGVPVLTDEWGVTLNSLHHGADYFL