AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0557200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0557200 MtrunA17_Chr4g0046291 99.160 476 4 0 1 476 1 476 0.0 983
Msa0557200 MtrunA17_Chr4g0040681 47.421 504 195 10 1 438 2 501 5.33e-143 419
Msa0557200 MtrunA17_Chr2g0283011 82.857 70 11 1 5 73 3 72 7.82e-32 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0557200 AT1G28520.4 70.204 490 119 7 3 474 4 484 0.0 682
Msa0557200 AT1G28520.1 70.204 490 119 7 3 474 4 484 0.0 682
Msa0557200 AT1G28520.2 70.204 490 119 7 3 474 4 484 0.0 682
Msa0557200 AT1G28520.5 70.204 490 119 7 3 474 4 484 0.0 682
Msa0557200 AT1G28520.3 67.551 490 116 8 3 474 4 468 0.0 642
Msa0557200 AT2G42400.1 49.436 443 182 10 21 429 14 448 1.43e-128 381

Find 161 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTCCTCCTTCTGCTTTCT+TGG 0.101987 4_1:-55506335 Msa0557200:CDS
GTTGCTGCTCCCTCACATTC+TGG 0.148081 4_1:+55506103 None:intergenic
AAGCAAGTTATCAACGAATT+TGG 0.192112 4_1:-55505799 Msa0557200:CDS
GAGAACACGGGCGACTATTA+TGG 0.245346 4_1:-55505418 Msa0557200:CDS
TGAATAGCTCATTCTCTTAC+TGG 0.264115 4_1:-55505228 Msa0557200:three_prime_UTR
CGTAAAGGTGCCATTCAAAA+TGG 0.269912 4_1:+55505734 None:intergenic
CTAAATGGAACATATGAATA+TGG 0.273129 4_1:-55505469 Msa0557200:CDS
CTTTAGTTCTAAACGGTATA+AGG 0.278335 4_1:+55505681 None:intergenic
CAGTCCCAAAGTGCACATTT+TGG 0.278981 4_1:+55506310 None:intergenic
CCTCCTCCTTCTGCTTTCTT+GGG 0.294484 4_1:-55506334 Msa0557200:CDS
TTCTTGAGGGCGAGACTATT+AGG 0.300754 4_1:-55505924 Msa0557200:CDS
TCAGGCTTAGGTGCAGTTAA+TGG 0.307307 4_1:+55509080 None:intergenic
TGATCTGCAGCTGATGTTCC+TGG 0.313776 4_1:-55509506 Msa0557200:CDS
TGCGTTGGTGATGTGAATTT+TGG 0.318949 4_1:+55510205 None:intergenic
GCCAACTTTGGCATTGATCT+TGG 0.322951 4_1:+55505531 None:intergenic
TTACTAGGGGAAGGGATAAA+AGG 0.326014 4_1:+55505293 None:intergenic
ATCATTTGTTATTCTTGCCT+TGG 0.335227 4_1:+55505636 None:intergenic
ATTGATCTTGGCTCTGCCTT+TGG 0.340387 4_1:+55505543 None:intergenic
TCTGAAGAGATCCTATTATA+TGG 0.344078 4_1:-55505773 Msa0557200:CDS
CACTGGAAGCTGCTGGATGC+TGG 0.345400 4_1:-55505198 Msa0557200:three_prime_UTR
AATTTATATGCTGGTTTCAA+TGG 0.345408 4_1:-55506418 Msa0557200:CDS
TTCAAAATTATGCTAATGTA+AGG 0.349293 4_1:-55505036 Msa0557200:three_prime_UTR
TATTCATATGTTCCATTTAG+TGG 0.352586 4_1:+55505472 None:intergenic
TCTTGAGGGCGAGACTATTA+GGG 0.353978 4_1:-55505923 Msa0557200:CDS
CCACTTTCAAATGCTCTTCG+AGG 0.358784 4_1:+55505880 None:intergenic
TCCAACCCTTGTGCGGGTCT+TGG 0.359244 4_1:+55506286 None:intergenic
GGGCCCAAAATGTGCACTTT+GGG 0.366259 4_1:-55506314 Msa0557200:CDS
ATCTTGGCTCTGCCTTTGGC+AGG 0.367430 4_1:+55505547 None:intergenic
CCAATACTATGTACCTTTGA+AGG 0.369943 4_1:+55504973 None:intergenic
TTTGATCTTTCTGTTCTTGA+GGG 0.378195 4_1:-55505937 Msa0557200:CDS
TTAGAACTAAAGCTTGTTGA+TGG 0.379159 4_1:-55505670 Msa0557200:CDS
TGAATTCAGGGTGGAAGTCT+TGG 0.379269 4_1:-55509167 Msa0557200:intron
CTCTTACTGGAGTGCGGCAC+TGG 0.383217 4_1:-55505215 Msa0557200:three_prime_UTR
AGGCTGTGGATCCATATAAT+AGG 0.383713 4_1:+55505762 None:intergenic
ATTGAGAAGGTGGTATATAA+AGG 0.384063 4_1:+55510275 None:intergenic
GTCTCATTTGCACTATTTCA+TGG 0.385507 4_1:-55505014 Msa0557200:three_prime_UTR
TTGCTGCTCCCTCACATTCT+GGG 0.388280 4_1:+55506104 None:intergenic
GCCTGCAGAGCCTGGTCGTT+AGG 0.397299 4_1:+55509056 None:intergenic
AACGACCAGGCTCTGCAGGC+TGG 0.398000 4_1:-55509053 Msa0557200:CDS
ACGACCAGGCTCTGCAGGCT+GGG 0.402119 4_1:-55509052 Msa0557200:CDS
CTGCAAAAGCCGACAGATAT+CGG 0.402396 4_1:+55509133 None:intergenic
TGGCCCCAGTTCTACGACCT+GGG 0.411747 4_1:-55506198 Msa0557200:CDS
GGCCTTGGATTCTTGTTACT+AGG 0.415115 4_1:+55505278 None:intergenic
AGAATTGCCCTGCTCTGTTT+AGG 0.425288 4_1:-55505091 Msa0557200:three_prime_UTR
TTTGATCATAATTTATATGC+TGG 0.428255 4_1:-55506427 Msa0557200:CDS
CAACCACGTCCACTGTAATC+TGG 0.432462 4_1:+55505835 None:intergenic
TCACCAGTTTGATTTGCAAC+AGG 0.437142 4_1:-55506452 Msa0557200:CDS
CAACAAGCTTTAGTTCTAAA+CGG 0.440064 4_1:+55505674 None:intergenic
CGTAGAACTGGGGCCATGCC+TGG 0.440198 4_1:+55506205 None:intergenic
AGAACACGGGCGACTATTAT+GGG 0.444586 4_1:-55505417 Msa0557200:CDS
GACAGCACCCATGCCAACTT+TGG 0.445539 4_1:+55505519 None:intergenic
ATTCATATGTTCCATTTAGT+GGG 0.448423 4_1:+55505473 None:intergenic
TGGTCGTTAGGTTCAGGCTT+AGG 0.450727 4_1:+55509068 None:intergenic
CTTTGATCTTTCTGTTCTTG+AGG 0.455790 4_1:-55505938 Msa0557200:CDS
AGCAAGGAGGCCAAAACAAA+AGG 0.459805 4_1:+55505324 None:intergenic
CCCAAGAAAGCAGAAGGAGG+AGG 0.461567 4_1:+55506334 None:intergenic
TGGGCCCAAAATGTGCACTT+TGG 0.466392 4_1:-55506315 Msa0557200:CDS
AGTCCTGTTGCAAATCAAAC+TGG 0.466924 4_1:+55506449 None:intergenic
ACCTAACGACCAGGCTCTGC+AGG 0.467191 4_1:-55509057 Msa0557200:CDS
GCCTTGGATTCTTGTTACTA+GGG 0.468364 4_1:+55505279 None:intergenic
TCCTCGCAAACTGCAAATCC+AGG 0.470484 4_1:+55509488 None:intergenic
GGATTTGCAGTTTGCGAGGA+AGG 0.474779 4_1:-55509485 Msa0557200:CDS
CGACCAGGCTCTGCAGGCTG+GGG 0.475560 4_1:-55509051 Msa0557200:CDS
GAATTCAGGGTGGAAGTCTT+GGG 0.477842 4_1:-55509166 Msa0557200:intron
AGTGCGGCACTGGAAGCTGC+TGG 0.480412 4_1:-55505205 Msa0557200:three_prime_UTR
GACCCGCACAAGGGTTGGAC+TGG 0.484548 4_1:-55506282 Msa0557200:CDS
ATGGCCCCAGTTCTACGACC+TGG 0.485189 4_1:-55506199 Msa0557200:CDS
GAAGGAGGAGGGCATATACT+TGG 0.487811 4_1:+55506346 None:intergenic
TAAATGGAACATATGAATAT+GGG 0.492155 4_1:-55505468 Msa0557200:CDS
TCAAAATGTGGCAGCCAACC+AGG 0.492352 4_1:-55506494 Msa0557200:CDS
GGATTCTTGTTACTAGGGGA+AGG 0.492494 4_1:+55505284 None:intergenic
TCCAAGACCCGCACAAGGGT+TGG 0.493065 4_1:-55506287 Msa0557200:CDS
GCCGCTCTAGCTTTGAATGA+AGG 0.497242 4_1:-55506232 Msa0557200:CDS
CCTTCAAAGGTACATAGTAT+TGG 0.501571 4_1:-55504973 Msa0557200:three_prime_UTR
GCCAAGATCAATGCCAAAGT+TGG 0.501693 4_1:-55505532 Msa0557200:CDS
TTCGAGTTTGACGATGAAGA+AGG 0.507110 4_1:-55509596 Msa0557200:exon
CAATAGAGCCTAAACAGAGC+AGG 0.507900 4_1:+55505083 None:intergenic
TGCTAATCTCATATTCGTAA+AGG 0.512641 4_1:+55505719 None:intergenic
GGTAGATAGCTAGATATAAG+AGG 0.516496 4_1:+55506367 None:intergenic
GGGAGAAGGCTCGTTGAGCT+CGG 0.517876 4_1:+55509396 None:intergenic
TCAAAATGGTTCAGAGGCTG+TGG 0.519821 4_1:+55505748 None:intergenic
AGAGCCTGGTCGTTAGGTTC+AGG 0.520922 4_1:+55509062 None:intergenic
GAATGAAGGGCCACCAGGCA+TGG 0.521673 4_1:-55506218 Msa0557200:CDS
TTCTCCACAAGATAGTCATA+TGG 0.522377 4_1:+55505436 None:intergenic
CAAGTTATCAACGAATTTGG+AGG 0.523716 4_1:-55505796 Msa0557200:CDS
GCTTTGAATGAAGGGCCACC+AGG 0.524274 4_1:-55506223 Msa0557200:CDS
AGTTTCCACCTGATAACAAA+AGG 0.534609 4_1:-55505570 Msa0557200:CDS
GAATTACCAGGTGCATTCCA+TGG 0.536252 4_1:+55506070 None:intergenic
GGCCCCAGTTCTACGACCTG+GGG 0.537066 4_1:-55506197 Msa0557200:CDS
GATTCTTGTTACTAGGGGAA+GGG 0.537320 4_1:+55505285 None:intergenic
AAATTACAACAAAATGAGAC+TGG 0.539754 4_1:+55504933 None:intergenic
ATTCTAAAGCAGCTCCATCC+TGG 0.540756 4_1:+55506476 None:intergenic
CAGCAACTGCAAAGTCTCCA+TGG 0.541576 4_1:-55506087 Msa0557200:CDS
TTATGGGACATGAGCTACAT+TGG 0.541623 4_1:-55505401 Msa0557200:exon
GATCAATGCCAAAGTTGGCA+TGG 0.545115 4_1:-55505527 Msa0557200:CDS
CCGCTCTAGCTTTGAATGAA+GGG 0.545380 4_1:-55506231 Msa0557200:CDS
CACCAGTCCAACCCTTGTGC+GGG 0.549255 4_1:+55506280 None:intergenic
ACACCAGTCCAACCCTTGTG+CGG 0.549317 4_1:+55506279 None:intergenic
CCTCGAAGAGCATTTGAAAG+TGG 0.553107 4_1:-55505880 Msa0557200:CDS
ACAGCAACATGATTTCCCAT+TGG 0.555494 4_1:-55506548 Msa0557200:CDS
GTTTGCGCTCATCAACCAAT+GGG 0.555849 4_1:+55506533 None:intergenic
TGATATGAGCTACCTACTGT+TGG 0.558937 4_1:-55504875 Msa0557200:three_prime_UTR
GAGCGCAAACACTCAACCTC+AGG 0.559169 4_1:-55506520 Msa0557200:CDS
TAGAACTAAAGCTTGTTGAT+GGG 0.559679 4_1:-55505669 Msa0557200:CDS
ATCAATGCCAAAGTTGGCAT+GGG 0.569128 4_1:-55505526 Msa0557200:CDS
TCGAGTTTGACGATGAAGAA+GGG 0.571227 4_1:-55509595 Msa0557200:exon
TTCATATGTTCCATTTAGTG+GGG 0.571518 4_1:+55505474 None:intergenic
TATTTCATGGTAGAAGTCGC+AGG 0.571803 4_1:-55505001 Msa0557200:three_prime_UTR
ACTTGCTGCAATGAAGAAGC+GGG 0.572984 4_1:+55509376 None:intergenic
TGCAATGAAGAAGCGGGAGA+AGG 0.575278 4_1:+55509382 None:intergenic
TGACTATCTTGTGGAGAACA+CGG 0.579872 4_1:-55505431 Msa0557200:CDS
TACTTGCTGCAATGAAGAAG+CGG 0.580011 4_1:+55509375 None:intergenic
GCTCTTAGTGCAAAGGCACA+AGG 0.580099 4_1:-55506142 Msa0557200:CDS
TGTTTGCGCTCATCAACCAA+TGG 0.580494 4_1:+55506532 None:intergenic
AAGGCACAAGGAAAAGATGT+TGG 0.580647 4_1:-55506130 Msa0557200:CDS
TTTGGGCCCAAGAAAGCAGA+AGG 0.584965 4_1:+55506328 None:intergenic
AGGGCGAGACTATTAGGGAA+TGG 0.585029 4_1:-55505918 Msa0557200:CDS
CCAAGAAAGCAGAAGGAGGA+GGG 0.588070 4_1:+55506335 None:intergenic
TTCATCAAATGCTTCGTGAG+TGG 0.588937 4_1:-55509423 Msa0557200:CDS
CAATGGTACAAGTTATTGTG+AGG 0.589421 4_1:-55506401 Msa0557200:CDS
CCTTGGATTCTTGTTACTAG+GGG 0.591387 4_1:+55505280 None:intergenic
GACTATCTTGTGGAGAACAC+GGG 0.594122 4_1:-55505430 Msa0557200:CDS
TTGCCAGATTACAGTGGACG+TGG 0.598415 4_1:-55505838 Msa0557200:CDS
TGCCATTCAAAATGGTTCAG+AGG 0.599568 4_1:+55505742 None:intergenic
AGCGATTATCACAGAATCTG+AGG 0.600961 4_1:-55510168 Msa0557200:intron
ATGGGAAATCATGTTGCTGT+TGG 0.604103 4_1:+55506551 None:intergenic
TAAAGCAGCTCCATCCTGGT+TGG 0.604183 4_1:+55506480 None:intergenic
TCCTGGATTTGCAGTTTGCG+AGG 0.604508 4_1:-55509489 Msa0557200:CDS
CCCCTAGTAACAAGAATCCA+AGG 0.605884 4_1:-55505280 Msa0557200:three_prime_UTR
AAGTCTCCATGGAATGCACC+TGG 0.606170 4_1:-55506076 Msa0557200:intron
GCACAGCAGCATCAACAGTA+CGG 0.606444 4_1:+55509458 None:intergenic
TGTTGATGCTGCTGTGCTCG+AGG 0.606882 4_1:-55509452 Msa0557200:CDS
TGTTGGCATCCCAGAATGTG+AGG 0.607178 4_1:-55506113 Msa0557200:CDS
TCATATGTTCCATTTAGTGG+GGG 0.609101 4_1:+55505475 None:intergenic
AATGTGGCAGCCAACCAGGA+TGG 0.609826 4_1:-55506490 Msa0557200:CDS
AATAGAGCCTAAACAGAGCA+GGG 0.610657 4_1:+55505084 None:intergenic
CAGATTACAGTGGACGTGGT+TGG 0.611374 4_1:-55505834 Msa0557200:CDS
CAGTGAAATCATCCAACAGT+AGG 0.612787 4_1:+55504863 None:intergenic
CTCATTCTCTTACTGGAGTG+CGG 0.615702 4_1:-55505221 Msa0557200:three_prime_UTR
GACTGTCCAAGACCCGCACA+AGG 0.617960 4_1:-55506292 Msa0557200:CDS
GTCGCAGGACAAACCTTCAA+AGG 0.620458 4_1:-55504986 Msa0557200:three_prime_UTR
CATACTCCACCGATATCTGT+CGG 0.625485 4_1:-55509142 Msa0557200:CDS
TGCACCATATGACTATCTTG+TGG 0.628768 4_1:-55505440 Msa0557200:CDS
AGAACTGGGGCCATGCCTGG+TGG 0.629740 4_1:+55506208 None:intergenic
TGCTGATCTACAGAAGCAGA+TGG 0.633546 4_1:-55505608 Msa0557200:CDS
TGGTACAAGTTATTGTGAGG+AGG 0.634405 4_1:-55506398 Msa0557200:CDS
GGGCCCAAGAAAGCAGAAGG+AGG 0.637584 4_1:+55506331 None:intergenic
CTATTCACAATATCTAGACA+AGG 0.640060 4_1:+55505244 None:intergenic
GATAACAAAAGGCCTGCCAA+AGG 0.643078 4_1:-55505559 Msa0557200:CDS
TAAGCCTGAACCTAACGACC+AGG 0.645449 4_1:-55509066 Msa0557200:CDS
GACCAGGCTCTGCAGGCTGG+GGG 0.657815 4_1:-55509050 Msa0557200:CDS
CCCTTCATTCAAAGCTAGAG+CGG 0.661772 4_1:+55506231 None:intergenic
GTTGGCATCCCAGAATGTGA+GGG 0.666558 4_1:-55506112 Msa0557200:CDS
AGGTCATTGCCAGATTACAG+TGG 0.682159 4_1:-55505844 Msa0557200:CDS
CAAAAGCCGACAGATATCGG+TGG 0.685536 4_1:+55509136 None:intergenic
TGATGGGAAGAAGAACTCCA+AGG 0.686149 4_1:-55505653 Msa0557200:CDS
AACCTCAGGAGTTCAAAATG+TGG 0.696064 4_1:-55506506 Msa0557200:CDS
GCCCCAGTTCTACGACCTGG+GGG 0.696304 4_1:-55506196 Msa0557200:CDS
ACTGTCCAAGACCCGCACAA+GGG 0.731238 4_1:-55506291 Msa0557200:CDS
AAAGTGGAAACAGAAAGCAG+AGG 0.746526 4_1:-55505864 Msa0557200:CDS
TCAGCTGCAGATCATCAACA+CGG 0.775219 4_1:+55509515 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTGATTTTCATTTT+TGG - chr4_1:55505220-55505239 Msa0557200:three_prime_UTR 10.0%
!!! TTTATTTGATTTTCATTTTT+GGG - chr4_1:55505221-55505240 Msa0557200:three_prime_UTR 10.0%
!! TATAAATAATAGATAATAGA+TGG + chr4_1:55506870-55506889 None:intergenic 10.0%
!!! TTATTTGATTTTCATTTTTG+GGG - chr4_1:55505222-55505241 Msa0557200:three_prime_UTR 15.0%
!!! AAATTAACTTAATTTTCAAG+TGG - chr4_1:55505396-55505415 Msa0557200:exon 15.0%
!!! AATTAACTTAATTTTCAAGT+GGG - chr4_1:55505397-55505416 Msa0557200:exon 15.0%
!!! CATGTTTTTCTATTTTTATT+AGG - chr4_1:55506234-55506253 Msa0557200:CDS 15.0%
!!! TTAATCAGTGTTATTAATAA+CGG + chr4_1:55506641-55506660 None:intergenic 15.0%
!! TTTCATTAACTTTGTAAATT+GGG - chr4_1:55508196-55508215 Msa0557200:intron 15.0%
!!! TATTAATCCAATTTTGTTTC+TGG - chr4_1:55505125-55505144 Msa0557200:three_prime_UTR 20.0%
!!! ATTAATCCAATTTTGTTTCT+GGG - chr4_1:55505126-55505145 Msa0557200:three_prime_UTR 20.0%
!! ATCAAAACAATCAAATAATC+TGG + chr4_1:55505255-55505274 None:intergenic 20.0%
!!! ATTGTTTTGATCTATGTTTA+GGG - chr4_1:55505264-55505283 Msa0557200:three_prime_UTR 20.0%
!! ATTGGTTGATTAATTGTAAT+TGG - chr4_1:55505341-55505360 Msa0557200:three_prime_UTR 20.0%
!! TTGGTTGATTAATTGTAATT+GGG - chr4_1:55505342-55505361 Msa0557200:three_prime_UTR 20.0%
!!! ATTAACTTAATTTTCAAGTG+GGG - chr4_1:55505398-55505417 Msa0557200:exon 20.0%
!! TAATATCATGTAATGTAAAC+TGG - chr4_1:55506658-55506677 Msa0557200:intron 20.0%
!!! AGTCTGTATTTTGTTATATT+TGG - chr4_1:55506813-55506832 Msa0557200:intron 20.0%
!! ATTATTCAACTACAATGTTA+AGG + chr4_1:55507186-55507205 None:intergenic 20.0%
!! AACATTGTAGTTGAATAATA+TGG - chr4_1:55507187-55507206 Msa0557200:intron 20.0%
!! ATAAATAAATAATACAGGCT+TGG - chr4_1:55508142-55508161 Msa0557200:intron 20.0%
!! GTTTCATTAACTTTGTAAAT+TGG - chr4_1:55508195-55508214 Msa0557200:intron 20.0%
!! TAAATATGTCGATCTTTAAA+AGG + chr4_1:55508492-55508511 None:intergenic 20.0%
!! TTTGATCATAATTTATATGC+TGG - chr4_1:55508749-55508768 Msa0557200:intron 20.0%
!!! CAATCTTTTAGAATCTTTTA+TGG - chr4_1:55509128-55509147 Msa0557200:CDS 20.0%
!! TAAATGGAACATATGAATAT+GGG - chr4_1:55509708-55509727 Msa0557200:intron 20.0%
!! TTCAAAATTATGCTAATGTA+AGG - chr4_1:55510140-55510159 Msa0557200:intron 20.0%
!!! TGTAATTTTTGTATGATTGA+AGG - chr4_1:55510258-55510277 Msa0557200:five_prime_UTR 20.0%
!!! GTAATTTTTGTATGATTGAA+GGG - chr4_1:55510259-55510278 Msa0557200:five_prime_UTR 20.0%
!! AAAGGTATGATTGTTGATTA+GGG + chr4_1:55505058-55505077 None:intergenic 25.0%
! GAACAAAATGAACAGTAAAA+GGG + chr4_1:55505098-55505117 None:intergenic 25.0%
! AGAACAAAATGAACAGTAAA+AGG + chr4_1:55505099-55505118 None:intergenic 25.0%
! TTTCTGCTAGTATATTTACT+TGG - chr4_1:55505156-55505175 Msa0557200:three_prime_UTR 25.0%
! TTCTGCTAGTATATTTACTT+GGG - chr4_1:55505157-55505176 Msa0557200:three_prime_UTR 25.0%
!!! ATTTTCATTTTTGGGGTTTT+GGG - chr4_1:55505229-55505248 Msa0557200:three_prime_UTR 25.0%
!!! GATTGTTTTGATCTATGTTT+AGG - chr4_1:55505263-55505282 Msa0557200:three_prime_UTR 25.0%
! GTTAATATGCTTGTGTTTAT+TGG - chr4_1:55505323-55505342 Msa0557200:three_prime_UTR 25.0%
! TGGTTGATTAATTGTAATTG+GGG - chr4_1:55505343-55505362 Msa0557200:three_prime_UTR 25.0%
!!! TGATTCTTGTTTTAGTCTTT+TGG - chr4_1:55505426-55505445 Msa0557200:CDS 25.0%
!!! GATTCTTGTTTTAGTCTTTT+GGG - chr4_1:55505427-55505446 Msa0557200:CDS 25.0%
!!! ATTCTTGTTTTAGTCTTTTG+GGG - chr4_1:55505428-55505447 Msa0557200:CDS 25.0%
! ATCACAATTCATAAAATTGC+TGG + chr4_1:55505919-55505938 None:intergenic 25.0%
!! AGCAATTTTATGAATTGTGA+TGG - chr4_1:55505918-55505937 Msa0557200:CDS 25.0%
! ATTGAGTGACAATATATTAG+TGG - chr4_1:55505952-55505971 Msa0557200:intron 25.0%
! AGTTCAAAACAACTAATAAC+CGG + chr4_1:55506354-55506373 None:intergenic 25.0%
!! ATAATATCATCCTTTTCTAG+AGG + chr4_1:55506716-55506735 None:intergenic 25.0%
! TTATATTGAAGCCAGAAAAA+TGG - chr4_1:55506885-55506904 Msa0557200:intron 25.0%
!!! ATTTGAACATACCATTTTTC+TGG + chr4_1:55506899-55506918 None:intergenic 25.0%
! AAAACTCAATATGCATACAT+CGG - chr4_1:55506930-55506949 Msa0557200:intron 25.0%
!! TTTGATTTCTTTATGTGAGT+TGG - chr4_1:55507015-55507034 Msa0557200:intron 25.0%
! TTGTAGTTGAATAATATGGA+TGG - chr4_1:55507191-55507210 Msa0557200:intron 25.0%
! AATCTCAATTTATCTCAAGA+GGG - chr4_1:55507293-55507312 Msa0557200:intron 25.0%
! ATCAATTAGGTTTCTTGATA+GGG + chr4_1:55507736-55507755 None:intergenic 25.0%
! TATCAATTAGGTTTCTTGAT+AGG + chr4_1:55507737-55507756 None:intergenic 25.0%
! TATTTCCTAGCATATCAATT+AGG + chr4_1:55507749-55507768 None:intergenic 25.0%
! AATTGATATGCTAGGAAATA+AGG - chr4_1:55507749-55507768 Msa0557200:intron 25.0%
!! AACAAAAAGCAATCAAGTTT+TGG + chr4_1:55508046-55508065 None:intergenic 25.0%
! TCTATAAACTGCCATAAATA+AGG + chr4_1:55508100-55508119 None:intergenic 25.0%
! ATTGCTTTATAGTGTTTCAT+AGG - chr4_1:55508173-55508192 Msa0557200:intron 25.0%
!! TCTTCTTTTGAATCAGTTAA+AGG + chr4_1:55508419-55508438 None:intergenic 25.0%
! CAGCATTAAAATATGGATAA+AGG + chr4_1:55508538-55508557 None:intergenic 25.0%
!!! AATTTATATGCTGGTTTCAA+TGG - chr4_1:55508758-55508777 Msa0557200:intron 25.0%
!! TTCTAAAAGATTGAATTACC+AGG + chr4_1:55509121-55509140 None:intergenic 25.0%
! ATTCATATGTTCCATTTAGT+GGG + chr4_1:55509706-55509725 None:intergenic 25.0%
! TATTCATATGTTCCATTTAG+TGG + chr4_1:55509707-55509726 None:intergenic 25.0%
! CTAAATGGAACATATGAATA+TGG - chr4_1:55509707-55509726 Msa0557200:intron 25.0%
! AAATTACAACAAAATGAGAC+TGG + chr4_1:55510246-55510265 None:intergenic 25.0%
ATTGAGAAGGTGGTATATAA+AGG + chr4_1:55504904-55504923 None:intergenic 30.0%
! TATACCACCTTCTCAATTTT+TGG - chr4_1:55504907-55504926 Msa0557200:three_prime_UTR 30.0%
! GAAAGGTATGATTGTTGATT+AGG + chr4_1:55505059-55505078 None:intergenic 30.0%
!!! GATTTTCATTTTTGGGGTTT+TGG - chr4_1:55505228-55505247 Msa0557200:three_prime_UTR 30.0%
CATGTCATATTTGTGAGTTT+AGG - chr4_1:55505542-55505561 Msa0557200:CDS 30.0%
!! TTTGTGAGTTTAGGTTTTCT+AGG - chr4_1:55505551-55505570 Msa0557200:CDS 30.0%
! TTTGTTTGAGATAACTGTCA+TGG - chr4_1:55505879-55505898 Msa0557200:CDS 30.0%
! TTGTTTGAGATAACTGTCAT+GGG - chr4_1:55505880-55505899 Msa0557200:CDS 30.0%
! TGAGTTTCTTATTCCCTTTT+GGG - chr4_1:55506169-55506188 Msa0557200:CDS 30.0%
TAACCTATAGTTAGAACTAC+CGG - chr4_1:55506332-55506351 Msa0557200:CDS 30.0%
!!! TATTTCTCATAGCGGATTTT+CGG - chr4_1:55506594-55506613 Msa0557200:intron 30.0%
TCATGTAATGTAAACTGGAA+AGG - chr4_1:55506663-55506682 Msa0557200:intron 30.0%
TGGCATTCAAATTTCAAGAA+CGG + chr4_1:55506850-55506869 None:intergenic 30.0%
! ATTTCTTTATGTGAGTTGGA+GGG - chr4_1:55507019-55507038 Msa0557200:intron 30.0%
GTCGAATTAACAGTACTTTA+TGG - chr4_1:55507119-55507138 Msa0557200:intron 30.0%
GATAGTCAATACAAATCTGT+GGG + chr4_1:55507164-55507183 None:intergenic 30.0%
GAATCTCAATTTATCTCAAG+AGG - chr4_1:55507292-55507311 Msa0557200:intron 30.0%
TGAAATGTAACTTGGATTTG+TGG - chr4_1:55507597-55507616 Msa0557200:intron 30.0%
! TATCTCTTCTACTCTGTTTT+TGG + chr4_1:55507635-55507654 None:intergenic 30.0%
AGAGATAGTTGAAAAAGATG+TGG - chr4_1:55507648-55507667 Msa0557200:intron 30.0%
GAGATAGTTGAAAAAGATGT+GGG - chr4_1:55507649-55507668 Msa0557200:intron 30.0%
AGAAACCTAATTGATATGCT+AGG - chr4_1:55507741-55507760 Msa0557200:intron 30.0%
TTTACCGTGTGAATAAATCT+TGG - chr4_1:55508065-55508084 Msa0557200:intron 30.0%
TTACCGTGTGAATAAATCTT+GGG - chr4_1:55508066-55508085 Msa0557200:intron 30.0%
ATAACATATCCAACAAACTG+GGG + chr4_1:55508349-55508368 None:intergenic 30.0%
CATAACATATCCAACAAACT+GGG + chr4_1:55508350-55508369 None:intergenic 30.0%
ACATAACATATCCAACAAAC+TGG + chr4_1:55508351-55508370 None:intergenic 30.0%
TTGGATATGTTATGTTGCAA+TGG - chr4_1:55508356-55508375 Msa0557200:intron 30.0%
TGGATATGTTATGTTGCAAT+GGG - chr4_1:55508357-55508376 Msa0557200:intron 30.0%
! TCTTTTGAATCAGTTAAAGG+AGG + chr4_1:55508416-55508435 None:intergenic 30.0%
!! AGGAAACTTGTTACAATTAC+AGG + chr4_1:55508585-55508604 None:intergenic 30.0%
TGTAATTGTAACAAGTTTCC+TGG - chr4_1:55508584-55508603 Msa0557200:intron 30.0%
ACAATATTGCTAAACCTTGT+AGG + chr4_1:55509185-55509204 None:intergenic 30.0%
TTTAATTATTTCCCCCTTGT+TGG - chr4_1:55509204-55509223 Msa0557200:intron 30.0%
TTTGATCTTTCTGTTCTTGA+GGG - chr4_1:55509239-55509258 Msa0557200:intron 30.0%
AAGCAAGTTATCAACGAATT+TGG - chr4_1:55509377-55509396 Msa0557200:intron 30.0%
TCTGAAGAGATCCTATTATA+TGG - chr4_1:55509403-55509422 Msa0557200:CDS 30.0%
TGCTAATCTCATATTCGTAA+AGG + chr4_1:55509460-55509479 None:intergenic 30.0%
!! CTTTAGTTCTAAACGGTATA+AGG + chr4_1:55509498-55509517 None:intergenic 30.0%
!! CAACAAGCTTTAGTTCTAAA+CGG + chr4_1:55509505-55509524 None:intergenic 30.0%
!! TTAGAACTAAAGCTTGTTGA+TGG - chr4_1:55509506-55509525 Msa0557200:CDS 30.0%
!! TAGAACTAAAGCTTGTTGAT+GGG - chr4_1:55509507-55509526 Msa0557200:CDS 30.0%
!! ATCATTTGTTATTCTTGCCT+TGG + chr4_1:55509543-55509562 None:intergenic 30.0%
TTCATATGTTCCATTTAGTG+GGG + chr4_1:55509705-55509724 None:intergenic 30.0%
!!! TATGCTGTTTCCTTTTGTTT+TGG - chr4_1:55509842-55509861 Msa0557200:intron 30.0%
ATAAAAGGAAAAACAGAGCA+AGG + chr4_1:55509871-55509890 None:intergenic 30.0%
CTATTCACAATATCTAGACA+AGG + chr4_1:55509935-55509954 None:intergenic 30.0%
! GACTGGACATTTTTATTACA+TGG + chr4_1:55510229-55510248 None:intergenic 30.0%
TCTTCCAAAAATTGAGAAGG+TGG + chr4_1:55504914-55504933 None:intergenic 35.0%
GTCTCTTCCAAAAATTGAGA+AGG + chr4_1:55504917-55504936 None:intergenic 35.0%
TGATTAGGGTAGAAAAGAGA+AGG + chr4_1:55505044-55505063 None:intergenic 35.0%
GATGTTGTAGATCGATTGAA+AGG + chr4_1:55505076-55505095 None:intergenic 35.0%
CGAAAACCCAGAAACAAAAT+TGG + chr4_1:55505135-55505154 None:intergenic 35.0%
GCTAGTATATTTACTTGGGT+TGG - chr4_1:55505161-55505180 Msa0557200:three_prime_UTR 35.0%
! TGCATCACATAGTCTTTTCA+AGG - chr4_1:55505625-55505644 Msa0557200:CDS 35.0%
!! ACATAGTCTTTTCAAGGACA+AGG - chr4_1:55505631-55505650 Msa0557200:CDS 35.0%
! AAAGCTGTGATTTTGAACTG+TGG - chr4_1:55505976-55505995 Msa0557200:intron 35.0%
! TTTTGAACTGTGGTGTTTGT+TGG - chr4_1:55505986-55506005 Msa0557200:intron 35.0%
! GTGAGTTTCTTATTCCCTTT+TGG - chr4_1:55506168-55506187 Msa0557200:CDS 35.0%
! GAGTTTCTTATTCCCTTTTG+GGG - chr4_1:55506170-55506189 Msa0557200:CDS 35.0%
TAGATTATCCATCCCCAAAA+GGG + chr4_1:55506185-55506204 None:intergenic 35.0%
ATAGATTATCCATCCCCAAA+AGG + chr4_1:55506186-55506205 None:intergenic 35.0%
TCTTGTAGATGCTTCAGAAA+TGG - chr4_1:55506289-55506308 Msa0557200:CDS 35.0%
!! TAACCGGTAGTTCTAACTAT+AGG + chr4_1:55506338-55506357 None:intergenic 35.0%
!! CTATCTGCTATTTCTCATAG+CGG - chr4_1:55506586-55506605 Msa0557200:intron 35.0%
! GATTTCTTTATGTGAGTTGG+AGG - chr4_1:55507018-55507037 Msa0557200:intron 35.0%
GTACTGTTAATTCGACAACA+AGG + chr4_1:55507115-55507134 None:intergenic 35.0%
GGATAGTCAATACAAATCTG+TGG + chr4_1:55507165-55507184 None:intergenic 35.0%
GATTCAATGCAAGTCTTCAA+TGG - chr4_1:55507229-55507248 Msa0557200:intron 35.0%
ATGTTGAATCACTTTGTTCC+TGG - chr4_1:55507258-55507277 Msa0557200:intron 35.0%
! ACTCTTTGCTGATGAGATTT+TGG + chr4_1:55507379-55507398 None:intergenic 35.0%
GAAAAATTAAGCCTGTCTTC+GGG + chr4_1:55507420-55507439 None:intergenic 35.0%
GGAAAAATTAAGCCTGTCTT+CGG + chr4_1:55507421-55507440 None:intergenic 35.0%
AAGTTAGAAAGAGAAGAGTG+TGG - chr4_1:55507683-55507702 Msa0557200:intron 35.0%
! AAGAGTGTGGAGAAAAGATA+GGG - chr4_1:55507696-55507715 Msa0557200:intron 35.0%
!!! GAGACGCATTTTCTGAAATA+TGG + chr4_1:55507863-55507882 None:intergenic 35.0%
TATTTCAGAAAATGCGTCTC+TGG - chr4_1:55507863-55507882 Msa0557200:intron 35.0%
TCAACCACATACAAAGAGTT+GGG + chr4_1:55507936-55507955 None:intergenic 35.0%
AGTTGTTAATTCCATCTAGC+TGG - chr4_1:55507966-55507985 Msa0557200:intron 35.0%
ATCACGTTAAAGTGCATACT+CGG + chr4_1:55507997-55508016 None:intergenic 35.0%
CTGCCATAAATAAGGTACAT+AGG + chr4_1:55508092-55508111 None:intergenic 35.0%
GGCAGTTTATAGACTTTGAA+AGG - chr4_1:55508107-55508126 Msa0557200:intron 35.0%
TGCTTAATGACTATTCCATG+CGG + chr4_1:55508246-55508265 None:intergenic 35.0%
TGGAATAGTCATTAAGCATC+AGG - chr4_1:55508248-55508267 Msa0557200:intron 35.0%
! ACTGATTCAAAAGAAGAGAG+AGG - chr4_1:55508422-55508441 Msa0557200:intron 35.0%
!!! TCCATATTTTAATGCTGAGC+TGG - chr4_1:55508541-55508560 Msa0557200:intron 35.0%
ACCAGCTCAGCATTAAAATA+TGG + chr4_1:55508545-55508564 None:intergenic 35.0%
TCCTGGTTTAACTGTAAAAC+AGG - chr4_1:55508601-55508620 Msa0557200:intron 35.0%
CCTGGTTTAACTGTAAAACA+GGG - chr4_1:55508602-55508621 Msa0557200:intron 35.0%
CAATGGTACAAGTTATTGTG+AGG - chr4_1:55508775-55508794 Msa0557200:intron 35.0%
GGTAGATAGCTAGATATAAG+AGG + chr4_1:55508812-55508831 None:intergenic 35.0%
! TTTTTCTGCTCTTAGTGCAA+AGG - chr4_1:55509027-55509046 Msa0557200:intron 35.0%
CTTTGATCTTTCTGTTCTTG+AGG - chr4_1:55509238-55509257 Msa0557200:intron 35.0%
CAAGTTATCAACGAATTTGG+AGG - chr4_1:55509380-55509399 Msa0557200:CDS 35.0%
AGTTTCCACCTGATAACAAA+AGG - chr4_1:55509606-55509625 Msa0557200:five_prime_UTR 35.0%
TCATATGTTCCATTTAGTGG+GGG + chr4_1:55509704-55509723 None:intergenic 35.0%
TTCTCCACAAGATAGTCATA+TGG + chr4_1:55509743-55509762 None:intergenic 35.0%
CTAGACAAGGCAAACAAAAA+TGG + chr4_1:55509922-55509941 None:intergenic 35.0%
TGAATAGCTCATTCTCTTAC+TGG - chr4_1:55509948-55509967 Msa0557200:intron 35.0%
GTCTCATTTGCACTATTTCA+TGG - chr4_1:55510162-55510181 Msa0557200:intron 35.0%
CCAATACTATGTACCTTTGA+AGG + chr4_1:55510206-55510225 None:intergenic 35.0%
! CCTTCAAAGGTACATAGTAT+TGG - chr4_1:55510203-55510222 Msa0557200:five_prime_UTR 35.0%
!!! CGTTGGTGATGTGAATTTTG+GGG + chr4_1:55504972-55504991 None:intergenic 40.0%
!!! GCGTTGGTGATGTGAATTTT+GGG + chr4_1:55504973-55504992 None:intergenic 40.0%
!!! TGCGTTGGTGATGTGAATTT+TGG + chr4_1:55504974-55504993 None:intergenic 40.0%
! TCACATCACCAACGCATTTT+TGG - chr4_1:55504978-55504997 Msa0557200:three_prime_UTR 40.0%
! CACATCACCAACGCATTTTT+GGG - chr4_1:55504979-55504998 Msa0557200:three_prime_UTR 40.0%
! ACATCACCAACGCATTTTTG+GGG - chr4_1:55504980-55504999 Msa0557200:three_prime_UTR 40.0%
! TTTTTCCCCCAAAAATGCGT+TGG + chr4_1:55504989-55505008 None:intergenic 40.0%
AGCGATTATCACAGAATCTG+AGG - chr4_1:55505008-55505027 Msa0557200:three_prime_UTR 40.0%
TAGGGTAGAAAAGAGAAGGA+CGG + chr4_1:55505040-55505059 None:intergenic 40.0%
! TTCGAGTTTGACGATGAAGA+AGG - chr4_1:55505580-55505599 Msa0557200:CDS 40.0%
TCGAGTTTGACGATGAAGAA+GGG - chr4_1:55505581-55505600 Msa0557200:CDS 40.0%
TTCATCAAATGCTTCGTGAG+TGG - chr4_1:55505753-55505772 Msa0557200:CDS 40.0%
! TACTTGCTGCAATGAAGAAG+CGG + chr4_1:55505804-55505823 None:intergenic 40.0%
TTCAATGCAATTGCAGCTAG+TGG - chr4_1:55505854-55505873 Msa0557200:CDS 40.0%
! TGGTGTTTGTTGGTGAATTC+AGG - chr4_1:55505996-55506015 Msa0557200:intron 40.0%
! GGTGTTTGTTGGTGAATTCA+GGG - chr4_1:55505997-55506016 Msa0557200:intron 40.0%
!!! GGGTAACGTCATTTTTCAAG+AGG - chr4_1:55506146-55506165 Msa0557200:CDS 40.0%
!! TTCTTATTCCCTTTTGGGGA+TGG - chr4_1:55506174-55506193 Msa0557200:CDS 40.0%
TCACTTTCGATTTCTGCTAC+TGG - chr4_1:55506395-55506414 Msa0557200:CDS 40.0%
GAAATAGCAGATAGCGTAGT+GGG + chr4_1:55506580-55506599 None:intergenic 40.0%
AGAAATAGCAGATAGCGTAG+TGG + chr4_1:55506581-55506600 None:intergenic 40.0%
! TGTTTTCACCAGTCATTGAG+TGG - chr4_1:55506752-55506771 Msa0557200:intron 40.0%
! GTTTTCACCAGTCATTGAGT+GGG - chr4_1:55506753-55506772 Msa0557200:intron 40.0%
! TTTTCACCAGTCATTGAGTG+GGG - chr4_1:55506754-55506773 Msa0557200:intron 40.0%
! TTTATGTGAGTTGGAGGGTA+AGG - chr4_1:55507024-55507043 Msa0557200:intron 40.0%
!! AGGAATGGGTTAAGAGAGAT+GGG - chr4_1:55507047-55507066 Msa0557200:intron 40.0%
TGAATCACTTTGTTCCTGGA+AGG - chr4_1:55507262-55507281 Msa0557200:intron 40.0%
TTGTTTCATTGCCACAACAG+TGG + chr4_1:55507335-55507354 None:intergenic 40.0%
GTTGTGGCAATGAAACAATG+TGG - chr4_1:55507337-55507356 Msa0557200:intron 40.0%
GCAATGAAACAATGTGGCTA+CGG - chr4_1:55507343-55507362 Msa0557200:intron 40.0%
!! GAAAAAAGTATCCCGAAGAC+AGG - chr4_1:55507406-55507425 Msa0557200:intron 40.0%
ACGTAGCAATCTGACAATCA+GGG - chr4_1:55507478-55507497 Msa0557200:intron 40.0%
! TCTGCTGATTGGTATTGGAT+GGG - chr4_1:55507544-55507563 Msa0557200:intron 40.0%
GTAACTTGGATTTGTGGATC+TGG - chr4_1:55507603-55507622 Msa0557200:intron 40.0%
! GAAGAGTGTGGAGAAAAGAT+AGG - chr4_1:55507695-55507714 Msa0557200:intron 40.0%
ACAAAGAGTTGGGCTTATCA+TGG + chr4_1:55507926-55507945 None:intergenic 40.0%
TAAGCCCAACTCTTTGTATG+TGG - chr4_1:55507929-55507948 Msa0557200:intron 40.0%
CTCAACCACATACAAAGAGT+TGG + chr4_1:55507937-55507956 None:intergenic 40.0%
CAACTCTTTGTATGTGGTTG+AGG - chr4_1:55507935-55507954 Msa0557200:intron 40.0%
AGGCCCAAGATTTATTCACA+CGG + chr4_1:55508072-55508091 None:intergenic 40.0%
! GGGCCTATGTACCTTATTTA+TGG - chr4_1:55508086-55508105 Msa0557200:intron 40.0%
! GAACCAGTTGCTTTCAAATC+AGG + chr4_1:55508274-55508293 None:intergenic 40.0%
GTTATGTTGCAATGGGCATT+AGG - chr4_1:55508364-55508383 Msa0557200:intron 40.0%
AGGAAACGTGTAAACTCTTG+AGG + chr4_1:55508472-55508491 None:intergenic 40.0%
GTACAGTGTGCAAGAAAAGA+TGG + chr4_1:55508516-55508535 None:intergenic 40.0%
! CCCTGTTTTACAGTTAAACC+AGG + chr4_1:55508605-55508624 None:intergenic 40.0%
ATGGGAAATCATGTTGCTGT+TGG + chr4_1:55508628-55508647 None:intergenic 40.0%
ACAGCAACATGATTTCCCAT+TGG - chr4_1:55508628-55508647 Msa0557200:intron 40.0%
AACCTCAGGAGTTCAAAATG+TGG - chr4_1:55508670-55508689 Msa0557200:intron 40.0%
!! TCACCAGTTTGATTTGCAAC+AGG - chr4_1:55508724-55508743 Msa0557200:intron 40.0%
AGTCCTGTTGCAAATCAAAC+TGG + chr4_1:55508730-55508749 None:intergenic 40.0%
TGGTACAAGTTATTGTGAGG+AGG - chr4_1:55508778-55508797 Msa0557200:intron 40.0%
! AGTCCCAAAGTGCACATTTT+GGG + chr4_1:55508868-55508887 None:intergenic 40.0%
AAGGCACAAGGAAAAGATGT+TGG - chr4_1:55509046-55509065 Msa0557200:CDS 40.0%
AAAGTGGAAACAGAAAGCAG+AGG - chr4_1:55509312-55509331 Msa0557200:intron 40.0%
AGGCTGTGGATCCATATAAT+AGG + chr4_1:55509417-55509436 None:intergenic 40.0%
! AGCCTCTGAACCATTTTGAA+TGG - chr4_1:55509432-55509451 Msa0557200:CDS 40.0%
TGCCATTCAAAATGGTTCAG+AGG + chr4_1:55509437-55509456 None:intergenic 40.0%
!! CGTAAAGGTGCCATTCAAAA+TGG + chr4_1:55509445-55509464 None:intergenic 40.0%
ATCAATGCCAAAGTTGGCAT+GGG - chr4_1:55509650-55509669 Msa0557200:intron 40.0%
TGCACCATATGACTATCTTG+TGG - chr4_1:55509736-55509755 Msa0557200:intron 40.0%
TGACTATCTTGTGGAGAACA+CGG - chr4_1:55509745-55509764 Msa0557200:intron 40.0%
TTATGGGACATGAGCTACAT+TGG - chr4_1:55509775-55509794 Msa0557200:intron 40.0%
AAAGGAAAAACAGAGCAAGG+AGG + chr4_1:55509868-55509887 None:intergenic 40.0%
TTACTAGGGGAAGGGATAAA+AGG + chr4_1:55509886-55509905 None:intergenic 40.0%
GATTCTTGTTACTAGGGGAA+GGG + chr4_1:55509894-55509913 None:intergenic 40.0%
CCTTGGATTCTTGTTACTAG+GGG + chr4_1:55509899-55509918 None:intergenic 40.0%
GCCTTGGATTCTTGTTACTA+GGG + chr4_1:55509900-55509919 None:intergenic 40.0%
AAGGCAAACAAAAATGGCCT+TGG + chr4_1:55509916-55509935 None:intergenic 40.0%
AATAGAGCCTAAACAGAGCA+GGG + chr4_1:55510095-55510114 None:intergenic 40.0%
TATTTCATGGTAGAAGTCGC+AGG - chr4_1:55510175-55510194 Msa0557200:five_prime_UTR 40.0%
TGATATGAGCTACCTACTGT+TGG - chr4_1:55510301-55510320 Msa0557200:five_prime_UTR 40.0%
!! CATCACCAACGCATTTTTGG+GGG - chr4_1:55504981-55505000 Msa0557200:three_prime_UTR 45.0%
GGGCTGTGAATAATTTGAGC+TGG - chr4_1:55505448-55505467 Msa0557200:CDS 45.0%
TCAGCTGCAGATCATCAACA+CGG + chr4_1:55505664-55505683 None:intergenic 45.0%
! ACTTGCTGCAATGAAGAAGC+GGG + chr4_1:55505803-55505822 None:intergenic 45.0%
! GTTTGTTGGTGAATTCAGGG+TGG - chr4_1:55506000-55506019 Msa0557200:intron 45.0%
TGAATTCAGGGTGGAAGTCT+TGG - chr4_1:55506009-55506028 Msa0557200:intron 45.0%
GAATTCAGGGTGGAAGTCTT+GGG - chr4_1:55506010-55506029 Msa0557200:intron 45.0%
CATACTCCACCGATATCTGT+CGG - chr4_1:55506034-55506053 Msa0557200:intron 45.0%
CTGCAAAAGCCGACAGATAT+CGG + chr4_1:55506046-55506065 None:intergenic 45.0%
TCAGGCTTAGGTGCAGTTAA+TGG + chr4_1:55506099-55506118 None:intergenic 45.0%
!! ATAGCGTAGTGGGCAAATAG+CGG + chr4_1:55506570-55506589 None:intergenic 45.0%
AACGGATCGTGCAAAATAGC+AGG + chr4_1:55506623-55506642 None:intergenic 45.0%
! CGTCTCTTCTCCTCTAGAAA+AGG - chr4_1:55506703-55506722 Msa0557200:intron 45.0%
!! GAGGAATGGGTTAAGAGAGA+TGG - chr4_1:55507046-55507065 Msa0557200:intron 45.0%
!! GGAATGGGTTAAGAGAGATG+GGG - chr4_1:55507048-55507067 Msa0557200:intron 45.0%
!! GAATGGGTTAAGAGAGATGG+GGG - chr4_1:55507049-55507068 Msa0557200:intron 45.0%
!! AATGGGTTAAGAGAGATGGG+GGG - chr4_1:55507050-55507069 Msa0557200:intron 45.0%
AAGAGAGATGGGGGGTAAAT+TGG - chr4_1:55507058-55507077 Msa0557200:intron 45.0%
AGAGAGATGGGGGGTAAATT+GGG - chr4_1:55507059-55507078 Msa0557200:intron 45.0%
CAAGTAGCTGTCCGACATAT+TGG - chr4_1:55507086-55507105 Msa0557200:intron 45.0%
CAACAAGGCTGCCAATATGT+CGG + chr4_1:55507100-55507119 None:intergenic 45.0%
GAGATTCATGTGATCCTTCC+AGG + chr4_1:55507279-55507298 None:intergenic 45.0%
GAGCTAACTATCCACTGTTG+TGG - chr4_1:55507321-55507340 Msa0557200:intron 45.0%
TGAAACAATGTGGCTACGGT+TGG - chr4_1:55507347-55507366 Msa0557200:intron 45.0%
CACGTAGCAATCTGACAATC+AGG - chr4_1:55507477-55507496 Msa0557200:intron 45.0%
AATAGTCAGCCTCTGCTGAT+TGG - chr4_1:55507533-55507552 Msa0557200:intron 45.0%
CATCCAATACCAATCAGCAG+AGG + chr4_1:55507545-55507564 None:intergenic 45.0%
! CTCTGCTGATTGGTATTGGA+TGG - chr4_1:55507543-55507562 Msa0557200:intron 45.0%
AGTTACATTTCACCTCCCAC+CGG + chr4_1:55507589-55507608 None:intergenic 45.0%
GTGGGAGGTGAAATGTAACT+TGG - chr4_1:55507589-55507608 Msa0557200:intron 45.0%
AAAGATAGGGCCCATGATCA+TGG - chr4_1:55507709-55507728 Msa0557200:intron 45.0%
AAGATAGGGCCCATGATCAT+GGG - chr4_1:55507710-55507729 Msa0557200:intron 45.0%
TTGATAGGGCCCATGATCAT+GGG + chr4_1:55507722-55507741 None:intergenic 45.0%
! AGGCCTGATTTGAAAGCAAC+TGG - chr4_1:55508268-55508287 Msa0557200:intron 45.0%
CATTACCTACCCCAGTTTGT+TGG - chr4_1:55508337-55508356 Msa0557200:intron 45.0%
CATATCCAACAAACTGGGGT+AGG + chr4_1:55508345-55508364 None:intergenic 45.0%
! AAAGAAGAGAGAGGCTCTGA+TGG - chr4_1:55508431-55508450 Msa0557200:intron 45.0%
GTTTGCGCTCATCAACCAAT+GGG + chr4_1:55508646-55508665 None:intergenic 45.0%
TGTTTGCGCTCATCAACCAA+TGG + chr4_1:55508647-55508666 None:intergenic 45.0%
! TGCCACATTTTGAACTCCTG+AGG + chr4_1:55508675-55508694 None:intergenic 45.0%
!! ATTCTAAAGCAGCTCCATCC+TGG + chr4_1:55508703-55508722 None:intergenic 45.0%
! CAGTCCCAAAGTGCACATTT+TGG + chr4_1:55508869-55508888 None:intergenic 45.0%
CCCTTCATTCAAAGCTAGAG+CGG + chr4_1:55508948-55508967 None:intergenic 45.0%
!! CCGCTCTAGCTTTGAATGAA+GGG - chr4_1:55508945-55508964 Msa0557200:intron 45.0%
GAATTACCAGGTGCATTCCA+TGG + chr4_1:55509109-55509128 None:intergenic 45.0%
TTTGTCTGCTACAGCCTACA+AGG - chr4_1:55509168-55509187 Msa0557200:intron 45.0%
TTCTTGAGGGCGAGACTATT+AGG - chr4_1:55509252-55509271 Msa0557200:intron 45.0%
TCTTGAGGGCGAGACTATTA+GGG - chr4_1:55509253-55509272 Msa0557200:intron 45.0%
CCACTTTCAAATGCTCTTCG+AGG + chr4_1:55509299-55509318 None:intergenic 45.0%
!! CCTCGAAGAGCATTTGAAAG+TGG - chr4_1:55509296-55509315 Msa0557200:intron 45.0%
AGGTCATTGCCAGATTACAG+TGG - chr4_1:55509332-55509351 Msa0557200:intron 45.0%
TCAAAATGGTTCAGAGGCTG+TGG + chr4_1:55509431-55509450 None:intergenic 45.0%
TGATGGGAAGAAGAACTCCA+AGG - chr4_1:55509523-55509542 Msa0557200:CDS 45.0%
TGCTGATCTACAGAAGCAGA+TGG - chr4_1:55509568-55509587 Msa0557200:CDS 45.0%
!! TTGGCAGGCCTTTTGTTATC+AGG + chr4_1:55509617-55509636 None:intergenic 45.0%
GATAACAAAAGGCCTGCCAA+AGG - chr4_1:55509617-55509636 Msa0557200:intron 45.0%
!! ATTGATCTTGGCTCTGCCTT+TGG + chr4_1:55509636-55509655 None:intergenic 45.0%
GCCAAGATCAATGCCAAAGT+TGG - chr4_1:55509644-55509663 Msa0557200:intron 45.0%
!! GCCAACTTTGGCATTGATCT+TGG + chr4_1:55509648-55509667 None:intergenic 45.0%
GATCAATGCCAAAGTTGGCA+TGG - chr4_1:55509649-55509668 Msa0557200:intron 45.0%
GACTATCTTGTGGAGAACAC+GGG - chr4_1:55509746-55509765 Msa0557200:intron 45.0%
AGAACACGGGCGACTATTAT+GGG - chr4_1:55509759-55509778 Msa0557200:intron 45.0%
AGCAAGGAGGCCAAAACAAA+AGG + chr4_1:55509855-55509874 None:intergenic 45.0%
GGATTCTTGTTACTAGGGGA+AGG + chr4_1:55509895-55509914 None:intergenic 45.0%
CCCCTAGTAACAAGAATCCA+AGG - chr4_1:55509896-55509915 Msa0557200:intron 45.0%
GGCCTTGGATTCTTGTTACT+AGG + chr4_1:55509901-55509920 None:intergenic 45.0%
CTCATTCTCTTACTGGAGTG+CGG - chr4_1:55509955-55509974 Msa0557200:intron 45.0%
AGAATTGCCCTGCTCTGTTT+AGG - chr4_1:55510085-55510104 Msa0557200:intron 45.0%
CAATAGAGCCTAAACAGAGC+AGG + chr4_1:55510096-55510115 None:intergenic 45.0%
!! AATTAATAAATAAATAATAC+AGG - chr4_1:55508137-55508156 Msa0557200:intron 5.0%
TGATCTGCAGCTGATGTTCC+TGG - chr4_1:55505670-55505689 Msa0557200:CDS 50.0%
TCCTGGATTTGCAGTTTGCG+AGG - chr4_1:55505687-55505706 Msa0557200:CDS 50.0%
TCCTCGCAAACTGCAAATCC+AGG + chr4_1:55505691-55505710 None:intergenic 50.0%
GGATTTGCAGTTTGCGAGGA+AGG - chr4_1:55505691-55505710 Msa0557200:CDS 50.0%
GCACAGCAGCATCAACAGTA+CGG + chr4_1:55505721-55505740 None:intergenic 50.0%
TGCAATGAAGAAGCGGGAGA+AGG + chr4_1:55505797-55505816 None:intergenic 50.0%
CAAAAGCCGACAGATATCGG+TGG + chr4_1:55506043-55506062 None:intergenic 50.0%
TGGTCGTTAGGTTCAGGCTT+AGG + chr4_1:55506111-55506130 None:intergenic 50.0%
TAAGCCTGAACCTAACGACC+AGG - chr4_1:55506110-55506129 Msa0557200:CDS 50.0%
AAACGACCCCACTCAATGAC+TGG + chr4_1:55506763-55506782 None:intergenic 50.0%
! ATGTGAGTTGGAGGGTAAGG+AGG - chr4_1:55507027-55507046 Msa0557200:intron 50.0%
AGTTGGAGGGTAAGGAGGAA+TGG - chr4_1:55507032-55507051 Msa0557200:intron 50.0%
GTTGGAGGGTAAGGAGGAAT+GGG - chr4_1:55507033-55507052 Msa0557200:intron 50.0%
AGATGGGGGGTAAATTGGGT+GGG - chr4_1:55507063-55507082 Msa0557200:intron 50.0%
TTGCCCAGATGGATAGATGC+AGG - chr4_1:55507454-55507473 Msa0557200:intron 50.0%
GTGCCTGCATCTATCCATCT+GGG + chr4_1:55507460-55507479 None:intergenic 50.0%
GCAATCTGACAATCAGGGTG+TGG - chr4_1:55507483-55507502 Msa0557200:intron 50.0%
ATCTGACAATCAGGGTGTGG+TGG - chr4_1:55507486-55507505 Msa0557200:intron 50.0%
! CAGCCTCTGCTGATTGGTAT+TGG - chr4_1:55507539-55507558 Msa0557200:intron 50.0%
!! GGTATTGGATGGGTTGACAG+TGG - chr4_1:55507554-55507573 Msa0557200:intron 50.0%
CTTGATAGGGCCCATGATCA+TGG + chr4_1:55507723-55507742 None:intergenic 50.0%
! AGAGAGAGGCTCTGATGGTT+TGG - chr4_1:55508436-55508455 Msa0557200:intron 50.0%
TCAAAATGTGGCAGCCAACC+AGG - chr4_1:55508682-55508701 Msa0557200:intron 50.0%
TAAAGCAGCTCCATCCTGGT+TGG + chr4_1:55508699-55508718 None:intergenic 50.0%
! GAAGGAGGAGGGCATATACT+TGG + chr4_1:55508833-55508852 None:intergenic 50.0%
CCAAGAAAGCAGAAGGAGGA+GGG + chr4_1:55508844-55508863 None:intergenic 50.0%
CCTCCTCCTTCTGCTTTCTT+GGG - chr4_1:55508842-55508861 Msa0557200:intron 50.0%
TTTGGGCCCAAGAAAGCAGA+AGG + chr4_1:55508851-55508870 None:intergenic 50.0%
TGGGCCCAAAATGTGCACTT+TGG - chr4_1:55508861-55508880 Msa0557200:intron 50.0%
GGGCCCAAAATGTGCACTTT+GGG - chr4_1:55508862-55508881 Msa0557200:intron 50.0%
!! GCCGCTCTAGCTTTGAATGA+AGG - chr4_1:55508944-55508963 Msa0557200:intron 50.0%
!! ACCTGGGGGCATTGGTTTAA+AGG - chr4_1:55508994-55509013 Msa0557200:intron 50.0%
TCCTTTAAACCAATGCCCCC+AGG + chr4_1:55508998-55509017 None:intergenic 50.0%
! GCTCTTAGTGCAAAGGCACA+AGG - chr4_1:55509034-55509053 Msa0557200:CDS 50.0%
TGTTGGCATCCCAGAATGTG+AGG - chr4_1:55509063-55509082 Msa0557200:CDS 50.0%
GTTGGCATCCCAGAATGTGA+GGG - chr4_1:55509064-55509083 Msa0557200:CDS 50.0%
TTGCTGCTCCCTCACATTCT+GGG + chr4_1:55509075-55509094 None:intergenic 50.0%
CAGCAACTGCAAAGTCTCCA+TGG - chr4_1:55509089-55509108 Msa0557200:CDS 50.0%
AAGTCTCCATGGAATGCACC+TGG - chr4_1:55509100-55509119 Msa0557200:CDS 50.0%
AGAGCTCTGCACTCCAACAA+GGG + chr4_1:55509220-55509239 None:intergenic 50.0%
AAGAGCTCTGCACTCCAACA+AGG + chr4_1:55509221-55509240 None:intergenic 50.0%
AGGGCGAGACTATTAGGGAA+TGG - chr4_1:55509258-55509277 Msa0557200:intron 50.0%
TTGCCAGATTACAGTGGACG+TGG - chr4_1:55509338-55509357 Msa0557200:intron 50.0%
CAACCACGTCCACTGTAATC+TGG + chr4_1:55509344-55509363 None:intergenic 50.0%
CAGATTACAGTGGACGTGGT+TGG - chr4_1:55509342-55509361 Msa0557200:intron 50.0%
!! GCAGGCCTTTTGTTATCAGG+TGG + chr4_1:55509614-55509633 None:intergenic 50.0%
CACAGAATGCCCCCACTAAA+TGG - chr4_1:55509692-55509711 Msa0557200:intron 50.0%
GAGAACACGGGCGACTATTA+TGG - chr4_1:55509758-55509777 Msa0557200:intron 50.0%
GTCGCAGGACAAACCTTCAA+AGG - chr4_1:55510190-55510209 Msa0557200:five_prime_UTR 50.0%
TGTTGATGCTGCTGTGCTCG+AGG - chr4_1:55505724-55505743 Msa0557200:CDS 55.0%
! TCGGCTTTTGCAGCTCTGTG+AGG - chr4_1:55506053-55506072 Msa0557200:intron 55.0%
! GCTTTTGCAGCTCTGTGAGG+AGG - chr4_1:55506056-55506075 Msa0557200:intron 55.0%
AGAGCCTGGTCGTTAGGTTC+AGG + chr4_1:55506117-55506136 None:intergenic 55.0%
GAGATGGGGGGTAAATTGGG+TGG - chr4_1:55507062-55507081 Msa0557200:intron 55.0%
CGTGCCTGCATCTATCCATC+TGG + chr4_1:55507461-55507480 None:intergenic 55.0%
! AATCAGGGTGTGGTGGTGTG+TGG - chr4_1:55507493-55507512 Msa0557200:intron 55.0%
! ATCAGGGTGTGGTGGTGTGT+GGG - chr4_1:55507494-55507513 Msa0557200:intron 55.0%
! TGGTGGTGTGTGGGAAGTGT+GGG - chr4_1:55507503-55507522 Msa0557200:intron 55.0%
CAGCAGAGGCTGACTATTCC+TGG + chr4_1:55507531-55507550 None:intergenic 55.0%
! ATGGGTTGACAGTGGCAGTG+AGG - chr4_1:55507562-55507581 Msa0557200:intron 55.0%
! TGGGTTGACAGTGGCAGTGA+GGG - chr4_1:55507563-55507582 Msa0557200:intron 55.0%
ACTCGGTAGCTCCAGCTAGA+TGG + chr4_1:55507980-55507999 None:intergenic 55.0%
!! GTTAGCTCTGATGTGCCGCA+TGG - chr4_1:55508228-55508247 Msa0557200:intron 55.0%
GAGCGCAAACACTCAACCTC+AGG - chr4_1:55508656-55508675 Msa0557200:intron 55.0%
AATGTGGCAGCCAACCAGGA+TGG - chr4_1:55508686-55508705 Msa0557200:intron 55.0%
CCCTCCTCCTTCTGCTTTCT+TGG - chr4_1:55508841-55508860 Msa0557200:intron 55.0%
CCCAAGAAAGCAGAAGGAGG+AGG + chr4_1:55508845-55508864 None:intergenic 55.0%
ACTGTCCAAGACCCGCACAA+GGG - chr4_1:55508885-55508904 Msa0557200:intron 55.0%
ACACCAGTCCAACCCTTGTG+CGG + chr4_1:55508900-55508919 None:intergenic 55.0%
! GCTTTGAATGAAGGGCCACC+AGG - chr4_1:55508953-55508972 Msa0557200:intron 55.0%
GTTGCTGCTCCCTCACATTC+TGG + chr4_1:55509076-55509095 None:intergenic 55.0%
AGCTCTGCACTCCAACAAGG+GGG + chr4_1:55509218-55509237 None:intergenic 55.0%
GAGCTCTGCACTCCAACAAG+GGG + chr4_1:55509219-55509238 None:intergenic 55.0%
!! ATCTTGGCTCTGCCTTTGGC+AGG + chr4_1:55509632-55509651 None:intergenic 55.0%
GACAGCACCCATGCCAACTT+TGG + chr4_1:55509660-55509679 None:intergenic 55.0%
GGGAGAAGGCTCGTTGAGCT+CGG + chr4_1:55505783-55505802 None:intergenic 60.0%
ACCTAACGACCAGGCTCTGC+AGG - chr4_1:55506119-55506138 Msa0557200:CDS 60.0%
CTGGGCAACGAGCGAGTGAT+GGG + chr4_1:55507442-55507461 None:intergenic 60.0%
TCTGGGCAACGAGCGAGTGA+TGG + chr4_1:55507443-55507462 None:intergenic 60.0%
TCACTCGCTCGTTGCCCAGA+TGG - chr4_1:55507443-55507462 Msa0557200:intron 60.0%
! GTGGTGGTGTGTGGGAAGTG+TGG - chr4_1:55507502-55507521 Msa0557200:intron 60.0%
! GTGTGGGAAGTGTGGGTTCC+AGG - chr4_1:55507510-55507529 Msa0557200:intron 60.0%
TTGACAGTGGCAGTGAGGGC+CGG - chr4_1:55507567-55507586 Msa0557200:intron 60.0%
GGGCCCAAGAAAGCAGAAGG+AGG + chr4_1:55508848-55508867 None:intergenic 60.0%
GACTGTCCAAGACCCGCACA+AGG - chr4_1:55508884-55508903 Msa0557200:intron 60.0%
TCCAAGACCCGCACAAGGGT+TGG - chr4_1:55508889-55508908 Msa0557200:intron 60.0%
TCCAACCCTTGTGCGGGTCT+TGG + chr4_1:55508893-55508912 None:intergenic 60.0%
CACCAGTCCAACCCTTGTGC+GGG + chr4_1:55508899-55508918 None:intergenic 60.0%
GAATGAAGGGCCACCAGGCA+TGG - chr4_1:55508958-55508977 Msa0557200:intron 60.0%
ATGGCCCCAGTTCTACGACC+TGG - chr4_1:55508977-55508996 Msa0557200:intron 60.0%
TGGCCCCAGTTCTACGACCT+GGG - chr4_1:55508978-55508997 Msa0557200:intron 60.0%
TGCCCCCAGGTCGTAGAACT+GGG + chr4_1:55508985-55509004 None:intergenic 60.0%
ATGCCCCCAGGTCGTAGAAC+TGG + chr4_1:55508986-55509005 None:intergenic 60.0%
! GTTCTACGACCTGGGGGCAT+TGG - chr4_1:55508986-55509005 Msa0557200:intron 60.0%
!! GGGGGCATTCTGTGAGAAGC+TGG + chr4_1:55509686-55509705 None:intergenic 60.0%
CTCTTACTGGAGTGCGGCAC+TGG - chr4_1:55509961-55509980 Msa0557200:intron 60.0%
CACTGGAAGCTGCTGGATGC+TGG - chr4_1:55509978-55509997 Msa0557200:intron 60.0%
GCCTGCAGAGCCTGGTCGTT+AGG + chr4_1:55506123-55506142 None:intergenic 65.0%
AACGACCAGGCTCTGCAGGC+TGG - chr4_1:55506123-55506142 Msa0557200:CDS 65.0%
ACGACCAGGCTCTGCAGGCT+GGG - chr4_1:55506124-55506143 Msa0557200:CDS 65.0%
GACCCGCACAAGGGTTGGAC+TGG - chr4_1:55508894-55508913 Msa0557200:intron 65.0%
AGAACTGGGGCCATGCCTGG+TGG + chr4_1:55508971-55508990 None:intergenic 65.0%
CGTAGAACTGGGGCCATGCC+TGG + chr4_1:55508974-55508993 None:intergenic 65.0%
GGCCCCAGTTCTACGACCTG+GGG - chr4_1:55508979-55508998 Msa0557200:intron 65.0%
GCCCCAGTTCTACGACCTGG+GGG - chr4_1:55508980-55508999 Msa0557200:intron 65.0%
GCCCCCAGGTCGTAGAACTG+GGG + chr4_1:55508984-55509003 None:intergenic 65.0%
! AGTGCGGCACTGGAAGCTGC+TGG - chr4_1:55509971-55509990 Msa0557200:intron 65.0%
CGACCAGGCTCTGCAGGCTG+GGG - chr4_1:55506125-55506144 Msa0557200:CDS 70.0%
GACCAGGCTCTGCAGGCTGG+GGG - chr4_1:55506126-55506145 Msa0557200:CDS 70.0%
TACCCCCAGCCTGCAGAGCC+TGG + chr4_1:55506131-55506150 None:intergenic 70.0%
ACAGTGGCAGTGAGGGCCGG+TGG - chr4_1:55507570-55507589 Msa0557200:intron 70.0%
CAGTGGCAGTGAGGGCCGGT+GGG - chr4_1:55507571-55507590 Msa0557200:intron 70.0%
TGGCAGTGAGGGCCGGTGGG+AGG - chr4_1:55507574-55507593 Msa0557200:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 55504865 55510333 55504865 ID=Msa0557200;Name=Msa0557200
chr4_1 mRNA 55504865 55510333 55504865 ID=Msa0557200-mRNA-1;Parent=Msa0557200;Name=Msa0557200-mRNA-1;_AED=0.02;_eAED=0.02;_QI=194|1|1|1|0.75|0.6|5|546|476
chr4_1 exon 55504865 55505964 55504865 ID=Msa0557200-mRNA-1:exon:16597;Parent=Msa0557200-mRNA-1
chr4_1 exon 55506077 55506575 55506077 ID=Msa0557200-mRNA-1:exon:16596;Parent=Msa0557200-mRNA-1
chr4_1 exon 55509031 55509180 55509031 ID=Msa0557200-mRNA-1:exon:16595;Parent=Msa0557200-mRNA-1
chr4_1 exon 55509378 55509634 55509378 ID=Msa0557200-mRNA-1:exon:16594;Parent=Msa0557200-mRNA-1
chr4_1 exon 55510169 55510333 55510169 ID=Msa0557200-mRNA-1:exon:16593;Parent=Msa0557200-mRNA-1
chr4_1 five_prime_UTR 55510169 55510333 55510169 ID=Msa0557200-mRNA-1:five_prime_utr;Parent=Msa0557200-mRNA-1
chr4_1 five_prime_UTR 55509606 55509634 55509606 ID=Msa0557200-mRNA-1:five_prime_utr;Parent=Msa0557200-mRNA-1
chr4_1 CDS 55509378 55509605 55509378 ID=Msa0557200-mRNA-1:cds;Parent=Msa0557200-mRNA-1
chr4_1 CDS 55509031 55509180 55509031 ID=Msa0557200-mRNA-1:cds;Parent=Msa0557200-mRNA-1
chr4_1 CDS 55506077 55506575 55506077 ID=Msa0557200-mRNA-1:cds;Parent=Msa0557200-mRNA-1
chr4_1 CDS 55505411 55505964 55505411 ID=Msa0557200-mRNA-1:cds;Parent=Msa0557200-mRNA-1
chr4_1 three_prime_UTR 55504865 55505410 55504865 ID=Msa0557200-mRNA-1:three_prime_utr;Parent=Msa0557200-mRNA-1
Gene Sequence

>Msa0557200

ATGAAGAAGGGTTCGAAGAGAAGCTGCAAGTCTGCATCACATAGTCTTTTCAAGGACAAGGCGAAGAACCGTGTTGATGATCTGCAGCTGATGTTCCTGGATTTGCAGTTTGCGAGGAAGGAAAGCCGTACTGTTGATGCTGCTGTGCTCGAGGAGCAAGTTCATCAAATGCTTCGTGAGTGGAAGTCCGAGCTCAACGAGCCTTCTCCCGCTTCTTCATTGCAGCAAGGTGGAAGTCTTGGGTCATACTCCACCGATATCTGTCGGCTTTTGCAGCTCTGTGAGGAGGAAGATGACGCATCTAGTCCATTAACTGCACCTAAGCCTGAACCTAACGACCAGGCTCTGCAGGCTGGGGGTAACGTCATTTTTCAAGAGGGCCAACAGCAACATGATTTCCCATTGGTTGATGAGCGCAAACACTCAACCTCAGGAGTTCAAAATGTGGCAGCCAACCAGGATGGAGCTGCTTTAGAATATCACCAGTTTGATTTGCAACAGGACTTTGATCATAATTTATATGCTGGTTTCAATGGTACAAGTTATTGTGAGGAGGATGCTGTTCCTCTTATATCTAGCTATCTACCAAGTATATGCCCTCCTCCTTCTGCTTTCTTGGGCCCAAAATGTGCACTTTGGGACTGTCCAAGACCCGCACAAGGGTTGGACTGGTGTCAAGACTATTGTAGTAGCTTTCATGCCGCTCTAGCTTTGAATGAAGGGCCACCAGGCATGGCCCCAGTTCTACGACCTGGGGGCATTGGTTTAAAGGATAACTTACTTTTTTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCACCTGAGCTCTTTGATCTTTCTGTTCTTGAGGGCGAGACTATTAGGGAATGGCTCTTCTTTGATAAGCCTCGAAGAGCATTTGAAAGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTACAGTGGACGTGGTTGGCACGAATCTAGAAAGCAAGTTATCAACGAATTTGGAGGTCTGAAGAGATCCTATTATATGGATCCACAGCCTCTGAACCATTTTGAATGGCACCTTTACGAATATGAGATTAGCAAGTGTGATGTATGTGCCTTATACCGTTTAGAACTAAAGCTTGTTGATGGGAAGAAGAACTCCAAGGCAAGAATAACAAATGATTCAGTTGCTGATCTACAGAAGCAGATGGTAAAGCTCTCTGCTGAGTTTCCACCTGATAACAAAAGGCCTGCCAAAGGCAGAGCCAAGATCAATGCCAAAGTTGGCATGGGTGCTGTCTATCCAGCTTCTCACAGAATGCCCCCACTAAATGGAACATATGAATATGGGTTAGCTGCACCATATGACTATCTTGTGGAGAACACGGGCGACTATTATGGGACATGA
Protein sequence

>Msa0557200

MKKGSKRSCKSASHSLFKDKAKNRVDDLQLMFLDLQFARKESRTVDAAVLEEQVHQMLREWKSELNEPSPASSLQQGGSLGSYSTDICRLLQLCEEEDDASSPLTAPKPEPNDQALQAGGNVIFQEGQQQHDFPLVDERKHSTSGVQNVAANQDGAALEYHQFDLQQDFDHNLYAGFNGTSYCEEDAVPLISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDVCALYRLELKLVDGKKNSKARITNDSVADLQKQMVKLSAEFPPDNKRPAKGRAKINAKVGMGAVYPASHRMPPLNGTYEYGLAAPYDYLVENTGDYYGT*