AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0558610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0558610 MtrunA17_Chr4g0048531 94.018 886 50 3 1 885 1 884 0.0 1615
Msa0558610 MtrunA17_Chr4g0048531 95.050 303 5 2 883 1185 990 1282 0.0 582
Msa0558610 MtrunA17_Chr2g0281051 49.603 504 183 11 6 501 4 444 7.58e-122 400
Msa0558610 MtrunA17_Chr2g0281051 56.623 302 95 6 883 1182 690 957 5.85e-88 306
Msa0558610 MtrunA17_Chr2g0281051 62.360 178 66 1 709 885 407 584 2.63e-65 240
Msa0558610 MtrunA17_Chr1g0211711 32.877 511 274 13 721 1180 557 1049 6.76e-72 261
Msa0558610 MtrunA17_Chr1g0211711 36.364 176 101 3 260 432 343 510 4.38e-27 119
Msa0558610 MtrunA17_Chr5g0426961 32.591 494 268 16 728 1181 363 831 8.94e-68 245
Msa0558610 MtrunA17_Chr5g0426961 32.275 189 120 3 230 417 112 293 2.52e-23 107
Msa0558610 MtrunA17_Chr6g0472441 31.458 480 275 14 728 1168 242 706 9.05e-57 210
Msa0558610 MtrunA17_Chr7g0275771 52.866 157 67 1 1026 1182 778 927 3.87e-50 192
Msa0558610 MtrunA17_Chr7g0275771 30.357 280 159 7 260 536 140 386 1.00e-30 131
Msa0558610 MtrunA17_Chr7g0275771 39.634 164 95 2 728 888 369 531 5.18e-28 122
Msa0558610 MtrunA17_Chr1g0147021 50.943 159 71 1 1023 1181 1546 1697 5.16e-47 184
Msa0558610 MtrunA17_Chr1g0147021 37.888 161 93 4 728 885 1067 1223 5.97e-28 122
Msa0558610 MtrunA17_Chr1g0147021 29.553 291 146 9 249 526 859 1103 2.21e-24 111
Msa0558610 MtrunA17_Chr1g0211661 29.224 438 248 13 728 1122 447 865 1.22e-45 178
Msa0558610 MtrunA17_Chr1g0211661 37.107 159 93 3 260 417 225 377 2.21e-22 104
Msa0558610 MtrunA17_Chr2g0289121 28.081 495 261 15 737 1181 372 821 1.44e-45 177
Msa0558610 MtrunA17_Chr2g0289121 37.297 185 105 4 255 438 152 326 1.18e-25 114
Msa0558610 MtrunA17_Chr1g0183311 52.903 155 63 2 1027 1181 734 878 3.21e-44 174
Msa0558610 MtrunA17_Chr1g0183311 40.828 169 85 7 728 888 367 528 2.42e-24 110
Msa0558610 MtrunA17_Chr1g0183311 34.328 201 121 5 260 455 144 338 1.22e-20 98.6
Msa0558610 MtrunA17_Chr4g0075261 35.117 299 144 6 883 1181 618 866 5.37e-44 173
Msa0558610 MtrunA17_Chr4g0075261 33.878 245 146 6 258 501 166 395 6.10e-32 135
Msa0558610 MtrunA17_Chr1g0192011 47.468 158 72 1 1025 1182 817 963 1.05e-43 173
Msa0558610 MtrunA17_Chr1g0192011 28.269 283 169 7 154 425 162 421 4.66e-25 113
Msa0558610 MtrunA17_Chr1g0192011 32.727 165 99 4 723 885 454 608 1.04e-16 85.9
Msa0558610 MtrunA17_Chr2g0289031 28.675 415 224 11 812 1181 8 395 6.79e-41 155
Msa0558610 MtrunA17_Chr5g0420361 52.555 137 58 1 1027 1163 650 779 1.97e-39 158
Msa0558610 MtrunA17_Chr5g0420361 35.065 154 87 6 741 885 307 456 8.13e-14 76.3
Msa0558610 MtrunA17_Chr5g0420361 37.500 88 54 1 347 433 157 244 1.94e-12 72.0
Msa0558610 MtrunA17_Chr1g0211701 51.724 116 56 0 1065 1180 1 116 4.66e-37 137
Msa0558610 MtrunA17_Chr1g0211691 28.784 403 213 17 728 1071 566 953 1.45e-29 127
Msa0558610 MtrunA17_Chr1g0211691 34.545 165 92 4 260 417 342 497 4.03e-18 90.5
Msa0558610 MtrunA17_Chr2g0289041 33.641 217 128 5 281 494 1 204 5.53e-28 112
Msa0558610 MtrunA17_Chr2g0289091 47.500 120 56 1 1024 1143 307 419 1.04e-27 117
Msa0558610 MtrunA17_Chr8g0361391 45.872 109 48 3 1023 1128 46 146 1.74e-23 98.6
Msa0558610 MtrunA17_Chr5g0448301 33.486 218 123 9 728 937 242 445 8.09e-23 104
Msa0558610 MtrunA17_Chr5g0448301 50.000 66 26 1 1027 1092 573 631 7.70e-11 66.6
Msa0558610 MtrunA17_Chr1g0211671 40.984 61 36 0 1124 1184 18 78 1.47e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0558610 AT4G21430.1 39.855 414 208 10 11 419 5 382 2.10e-72 261
Msa0558610 AT4G21430.1 55.090 167 67 1 1016 1182 757 915 1.95e-50 194
Msa0558610 AT4G21430.1 39.241 158 88 3 730 885 412 563 8.41e-29 125
Msa0558610 AT3G07610.1 32.075 477 273 10 738 1178 429 890 5.91e-62 231
Msa0558610 AT3G07610.1 33.140 172 107 4 260 430 155 319 1.77e-21 102
Msa0558610 AT4G00990.1 35.294 306 164 6 883 1181 553 831 3.71e-49 189
Msa0558610 AT4G00990.1 30.035 283 137 9 260 536 80 307 2.00e-26 117
Msa0558610 AT4G00990.1 34.896 192 109 7 702 888 268 448 4.09e-24 110
Msa0558610 AT1G11950.1 51.250 160 71 1 1022 1181 718 870 2.71e-45 177
Msa0558610 AT1G11950.1 26.821 302 177 6 260 533 176 461 1.00e-24 112
Msa0558610 AT1G11950.1 35.556 180 100 6 713 887 391 559 3.25e-22 103
Msa0558610 AT1G11950.3 51.250 160 71 1 1022 1181 718 870 2.71e-45 177
Msa0558610 AT1G11950.3 26.821 302 177 6 260 533 176 461 1.00e-24 112
Msa0558610 AT1G11950.3 35.556 180 100 6 713 887 391 559 3.25e-22 103
Msa0558610 AT3G07610.3 48.684 152 71 1 1027 1178 768 912 2.65e-40 162
Msa0558610 AT3G07610.3 33.140 172 107 4 260 430 155 319 1.91e-21 102
Msa0558610 AT3G07610.3 36.129 155 93 4 738 888 429 581 1.22e-19 95.9
Msa0558610 AT1G09060.2 41.579 190 97 2 993 1182 718 893 2.37e-38 156
Msa0558610 AT1G09060.2 29.098 244 145 6 260 502 206 422 2.17e-26 117
Msa0558610 AT1G09060.2 30.220 182 107 5 708 885 385 550 1.52e-12 72.8
Msa0558610 AT1G09060.1 41.579 190 97 2 993 1182 718 893 2.37e-38 156
Msa0558610 AT1G09060.1 29.098 244 145 6 260 502 206 422 2.17e-26 117
Msa0558610 AT1G09060.1 30.220 182 107 5 708 885 385 550 1.52e-12 72.8
Msa0558610 AT1G62310.1 50.345 145 65 1 1024 1168 746 883 2.44e-38 155
Msa0558610 AT1G62310.1 32.271 251 143 6 260 501 209 441 5.79e-31 132
Msa0558610 AT1G62310.1 36.810 163 91 4 728 887 424 577 1.48e-20 99.0
Msa0558610 AT1G09060.4 41.579 190 97 2 993 1182 732 907 2.69e-38 155
Msa0558610 AT1G09060.4 29.098 244 145 6 260 502 220 436 2.69e-26 117
Msa0558610 AT1G09060.4 30.220 182 107 5 708 885 399 564 1.74e-12 72.8
Msa0558610 AT1G09060.3 41.579 190 97 2 993 1182 732 907 2.69e-38 155
Msa0558610 AT1G09060.3 29.098 244 145 6 260 502 220 436 2.69e-26 117
Msa0558610 AT1G09060.3 30.220 182 107 5 708 885 399 564 1.74e-12 72.8
Msa0558610 AT4G00990.3 31.837 245 133 6 883 1120 553 770 7.05e-29 125
Msa0558610 AT4G00990.3 30.035 283 137 9 260 536 80 307 1.69e-26 117
Msa0558610 AT4G00990.3 34.896 192 109 7 702 888 268 448 4.99e-24 109
Msa0558610 AT4G00990.2 31.837 245 133 6 883 1120 553 770 7.23e-29 125
Msa0558610 AT4G00990.2 30.035 283 137 9 260 536 80 307 1.55e-26 117
Msa0558610 AT4G00990.2 34.896 192 109 7 702 888 268 448 5.04e-24 109
Msa0558610 AT1G11950.2 26.821 302 177 6 260 533 176 461 9.37e-25 112
Msa0558610 AT1G11950.2 35.556 180 100 6 713 887 391 559 3.77e-22 103
Msa0558610 AT1G11950.2 51.648 91 37 1 1022 1112 718 801 6.93e-20 96.7
Msa0558610 AT3G07610.2 33.140 172 107 4 260 430 155 319 6.38e-21 99.8
Msa0558610 AT3G07610.2 36.129 155 93 4 738 888 429 581 3.93e-19 94.0

Find 267 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTATTCTTCTTCTTAT+TGG 0.085338 4_1:+57566171 None:intergenic
TTTATTTAGGTTGTGCCTTA+TGG 0.157329 4_1:-57565836 Msa0558610:intron
CAAATCAAGCAGGTTAAATT+TGG 0.181204 4_1:-57564701 Msa0558610:CDS
AATATATTTATTTCAGCTTC+AGG 0.233542 4_1:+57560241 None:intergenic
CGACAGTGAGCACCGTATTT+TGG 0.239480 4_1:-57564427 Msa0558610:CDS
TGCAAATCAAATAATGAAAA+TGG 0.264039 4_1:+57564904 None:intergenic
GAGCTTTCAGCGGGACTTCT+AGG 0.264344 4_1:+57561425 None:intergenic
GAAGCTGAAATAAATATATT+TGG 0.265808 4_1:-57560238 Msa0558610:three_prime_UTR
AATTGTAATGACAGCGAAAA+AGG 0.283370 4_1:-57564033 Msa0558610:CDS
AATTGTAATGACAGCGAAAA+AGG 0.283370 4_1:-57564135 Msa0558610:CDS
GGATCTTATAAGAATGGTTT+TGG 0.295714 4_1:-57566227 Msa0558610:CDS
ATCTGGAAGGTACTTATAAA+TGG 0.298207 4_1:-57560314 Msa0558610:three_prime_UTR
TTATGTCAAGGAAGAACTTC+TGG 0.298386 4_1:-57564501 Msa0558610:CDS
CATAAAGACTTCAGTCTTAG+AGG 0.312350 4_1:+57560396 None:intergenic
AGCAACCCTATCAATATTCT+TGG 0.316108 4_1:+57565946 None:intergenic
TCGTTAACAGATTCACCTTC+TGG 0.323116 4_1:-57566298 Msa0558610:CDS
GTGCAAGTCCGTTGACAAAC+TGG 0.326947 4_1:+57565116 None:intergenic
GATTCTGAACCCTCTCTTCA+TGG 0.331186 4_1:-57561473 Msa0558610:CDS
CTGTTTCTAGCTCAGTTTCT+CGG 0.332064 4_1:+57564847 None:intergenic
GGTTGCTCTTGGGAAGTTGC+AGG 0.336866 4_1:-57565930 Msa0558610:intron
AACATCATACAATACAAATA+AGG 0.345311 4_1:+57560273 None:intergenic
AGACCTTAGAATTCCTTATC+TGG 0.347753 4_1:+57560963 None:intergenic
TCAGGTCCAAGAATATTGAT+AGG 0.363284 4_1:-57565952 Msa0558610:CDS
TTCTTCAAGCTTGGTCCATA+AGG 0.365467 4_1:+57565821 None:intergenic
ATCCCTTTCACTTCCCGTTC+AGG 0.368327 4_1:+57561677 None:intergenic
CGATATTCCGTTCTCCGTCC+TGG 0.368695 4_1:+57561501 None:intergenic
GCTGAAGAAACGGTACAAAA+AGG 0.370442 4_1:-57561641 Msa0558610:CDS
CAGCTTCTCCAACATGTTGC+TGG 0.371868 4_1:+57561011 None:intergenic
AGAGTTACTTGAATCCTGTT+TGG 0.378807 4_1:-57563161 Msa0558610:CDS
TCAACGGACTTGCACTTGTA+AGG 0.380103 4_1:-57565108 Msa0558610:CDS
GATTATATCGATCAGTATTA+AGG 0.380811 4_1:+57563413 None:intergenic
TATCATTACCATTTGTCCTC+TGG 0.385531 4_1:+57564355 None:intergenic
CTGTAACGCCGCATTACTTC+AGG 0.387375 4_1:-57565970 Msa0558610:CDS
GTCATTACAATTTGTCCTCT+CGG 0.390359 4_1:+57564044 None:intergenic
TTAATGTATTCTACGAGCTT+TGG 0.390486 4_1:+57561332 None:intergenic
AAAATGCTCTGATCTAGAAT+TGG 0.393375 4_1:+57561182 None:intergenic
TACTGAGCTGTTACCTGAAC+GGG 0.398022 4_1:-57561690 Msa0558610:CDS
AACTGAGGTTTGATGTACTT+TGG 0.399437 4_1:+57563248 None:intergenic
GATATCTCCATTACTCCATT+TGG 0.399686 4_1:+57566070 None:intergenic
CCTTGTGGCAACTCGAACAC+TGG 0.399979 4_1:+57565741 None:intergenic
GTTACAGTGAAAATATTTGC+TGG 0.406275 4_1:-57564679 Msa0558610:intron
ATCATTACAATTTGTCCTCT+CGG 0.408639 4_1:+57563834 None:intergenic
ATCATTACCATTTGTCCTCT+GGG 0.408717 4_1:+57564356 None:intergenic
GTCTGACCTCGTCAATCAAC+TGG 0.414789 4_1:+57560687 None:intergenic
GTCATTACAATTTGTCCTCT+CGG 0.414955 4_1:+57563624 None:intergenic
TAAGAACAAGGAAGAAGAAC+AGG 0.415178 4_1:-57566440 Msa0558610:CDS
ATCATTACAATTTGTCCTCT+CGG 0.416975 4_1:+57563729 None:intergenic
TTCTAAATAGGTGAAGAAAA+TGG 0.420597 4_1:-57560505 Msa0558610:intron
ACATCTTGCATCTCCTCAAC+TGG 0.424879 4_1:-57561566 Msa0558610:CDS
TGTGAGATTCATTATCTTCA+AGG 0.428955 4_1:-57566520 Msa0558610:CDS
GGGACTTCTAGGTGACAAAT+TGG 0.429038 4_1:+57561436 None:intergenic
ACAATGTGGAAGAAACAGTT+AGG 0.430854 4_1:-57566393 Msa0558610:CDS
ACAATTGGATCTTATAAGAA+TGG 0.431045 4_1:-57566233 Msa0558610:CDS
CTCACTAAAATTGGTCATCT+CGG 0.435621 4_1:+57563939 None:intergenic
TCCTACGGAGCTTGGTGGAC+GGG 0.442880 4_1:-57563791 Msa0558610:CDS
TTTCAGAAACACTGGGGAAA+AGG 0.444483 4_1:-57563298 Msa0558610:CDS
TCATTACAATTTGTCCTCTC+AGG 0.447184 4_1:+57564147 None:intergenic
ATGTTCCCCTTCTTCAAGCT+TGG 0.448016 4_1:+57565812 None:intergenic
AAGTAGCAGTTAAATCAAAT+AGG 0.448870 4_1:+57564283 None:intergenic
ATGTACTTTGGAGCACATCT+TGG 0.448998 4_1:+57563260 None:intergenic
GAGCTTGGTGGACGAGATAC+AGG 0.453341 4_1:-57564096 Msa0558610:CDS
CAAAGCATCATGCCGTCCTA+TGG 0.454944 4_1:-57564328 Msa0558610:CDS
AGCACATCTTGGACCACTAT+AGG 0.456305 4_1:+57563271 None:intergenic
TGCTCAAACTCATTAAGATC+TGG 0.456332 4_1:-57560331 Msa0558610:three_prime_UTR
GCATGCATGTTTAGTTTCGC+TGG 0.457917 4_1:+57560418 None:intergenic
TGCCCTCCTACGGAGCTTGA+TGG 0.458504 4_1:-57564006 Msa0558610:CDS
CTGGTTGTCCGTACCAGATA+AGG 0.461242 4_1:-57560976 Msa0558610:CDS
GAAGCAATGTGATACACAAT+TGG 0.461470 4_1:-57566248 Msa0558610:CDS
GCACAAAGCTCTGTGTCAAA+TGG 0.462122 4_1:-57561723 Msa0558610:CDS
CCTATGGAGCTTGGTGGATG+TGG 0.464121 4_1:-57564207 Msa0558610:CDS
TAATCACCCGGCGTCGAAGC+TGG 0.464912 4_1:+57566046 None:intergenic
AATATTGATAGGGTTGCTCT+TGG 0.465229 4_1:-57565941 Msa0558610:CDS
AAGTAATGGCAGTGAAAGTA+AGG 0.468390 4_1:-57565069 Msa0558610:CDS
AAAAGTATCATGCCCTCCTA+TGG 0.468733 4_1:-57564223 Msa0558610:CDS
GAGCTTGATGGACGAGATAC+AGG 0.469107 4_1:-57563994 Msa0558610:CDS
CTATGACTTTCCTGAAACTT+CGG 0.470452 4_1:-57563473 Msa0558610:CDS
GAGCTTGGTGGATGTGGTAC+AGG 0.470607 4_1:-57564201 Msa0558610:CDS
AACCTCACACCAATCCAAAC+AGG 0.473499 4_1:+57563147 None:intergenic
AAAGTACATCAAACCTCAGT+TGG 0.475272 4_1:-57563246 Msa0558610:CDS
GTACCAGATAAGGAATTCTA+AGG 0.475903 4_1:-57560966 Msa0558610:intron
TCATTACAATTTGTCCTCTC+GGG 0.476548 4_1:+57563730 None:intergenic
TCATTACAATTTGTCCTCTC+GGG 0.476548 4_1:+57563835 None:intergenic
TCACTGCAAAACACCTGTCT+TGG 0.476800 4_1:-57564583 Msa0558610:CDS
TACTTGAATCCTGTTTGGAT+TGG 0.477458 4_1:-57563156 Msa0558610:CDS
TCATTACAATTTGTCCTCTC+GGG 0.480691 4_1:+57564045 None:intergenic
GATTTAAAGAATCACTTCTC+TGG 0.480941 4_1:+57565768 None:intergenic
CTTCCGCACCGGAGTTCGTC+CGG 0.481016 4_1:+57566598 None:intergenic
GAGCTTGGTGGATGTGGTAC+AGG 0.482145 4_1:-57563574 Msa0558610:CDS
GATATTCCGTTCTCCGTCCT+GGG 0.484271 4_1:+57561502 None:intergenic
TCATTACAATTTGTCCTCTC+GGG 0.484883 4_1:+57563625 None:intergenic
AAAAGGATCATGCCCTCCTA+TGG 0.487053 4_1:-57564118 Msa0558610:CDS
CTCCTACGGAGCTTGGTGGA+CGG 0.487081 4_1:-57563792 Msa0558610:CDS
ACATTGCCCCAGAGGACAAA+TGG 0.487539 4_1:-57564363 Msa0558610:CDS
CTCTGAAGCTTCAAAGACTC+TGG 0.487745 4_1:+57566469 None:intergenic
TGGAGAGAGAAGTTGAGAAG+AGG 0.488065 4_1:-57566207 Msa0558610:CDS
AAAGGTAATTAAAGAAGAAG+TGG 0.491533 4_1:-57566134 Msa0558610:CDS
TCACTTATTCGCTTTAGTAA+TGG 0.492198 4_1:+57564873 None:intergenic
AAGTAAGGACAGTGAAAGTA+AGG 0.492428 4_1:-57565054 Msa0558610:intron
ATATATTTATTTCAGCTTCA+GGG 0.492929 4_1:+57560242 None:intergenic
TGAAGAAGGGGAACATTAAG+AGG 0.493883 4_1:-57565805 Msa0558610:CDS
TTCAATGTCTTCTTCCTCGC+AGG 0.496109 4_1:+57566268 None:intergenic
ATTCCTTCTTTCCCCATACT+CGG 0.499857 4_1:+57561614 None:intergenic
ATTCTGAACCCTCTCTTCAT+GGG 0.500401 4_1:-57561472 Msa0558610:CDS
CCTACGGAGCTTGGTGGATG+TGG 0.500603 4_1:-57563580 Msa0558610:CDS
TCATTACAATTTGTACGCTC+AGG 0.503365 4_1:+57564252 None:intergenic
TCCCGTCGGTTCTTCCGCAC+CGG 0.504790 4_1:+57566587 None:intergenic
TTATGGACCAAGCTTGAAGA+AGG 0.505193 4_1:-57565819 Msa0558610:CDS
TTGAGCACTTTCAGAAACAC+TGG 0.506615 4_1:-57563306 Msa0558610:CDS
TGTCCTTCTGATCCAAAATA+CGG 0.506979 4_1:+57564415 None:intergenic
TCACTAAAATTGGTCATCTC+GGG 0.512183 4_1:+57563940 None:intergenic
TTCTGATATTCAAATCAAGC+AGG 0.514306 4_1:-57564711 Msa0558610:CDS
TCATGCCCTCCTATGGAGCT+TGG 0.515388 4_1:-57564111 Msa0558610:CDS
TCATGCCCTCCTATGGAGCT+TGG 0.515388 4_1:-57564216 Msa0558610:CDS
CCACATCCACCAAGCTCCAT+AGG 0.515620 4_1:+57564207 None:intergenic
TCATGCCCTCCTACGGAGCT+TGG 0.516173 4_1:-57563589 Msa0558610:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.516173 4_1:-57563694 Msa0558610:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.516173 4_1:-57563799 Msa0558610:CDS
TTGCACTTGTAAGGTCTGCT+TGG 0.519166 4_1:-57565099 Msa0558610:CDS
GCATCGTCAATATAGAGAAA+AGG 0.520257 4_1:-57566494 Msa0558610:CDS
TGCCCTCCTATGGAGCTTGG+TGG 0.523556 4_1:-57564213 Msa0558610:CDS
GTGTTGTGTCCATGCGGTAT+TGG 0.523572 4_1:-57560744 Msa0558610:CDS
AGCTTCTACCGGACGAACTC+CGG 0.528374 4_1:-57566606 Msa0558610:CDS
ATACAACAAAGTGGGAGATA+AGG 0.528558 4_1:+57560359 None:intergenic
AGAATTACCAAATGGAGTAA+TGG 0.529396 4_1:-57566077 Msa0558610:CDS
ATATCACCAGCTTCGACGCC+GGG 0.530264 4_1:-57566052 Msa0558610:CDS
ATATTGATAGGGTTGCTCTT+GGG 0.530365 4_1:-57565940 Msa0558610:CDS
TCATGCCCTCCTACGGAGCT+TGG 0.533099 4_1:-57563904 Msa0558610:CDS
TGCCCTCCTACGGAGCTTGG+TGG 0.534853 4_1:-57563586 Msa0558610:CDS
TCTCGTCCACCAAGCTCCAT+AGG 0.535749 4_1:+57564102 None:intergenic
GCTTTGATTGTATAAGAGAT+CGG 0.536835 4_1:-57565709 Msa0558610:intron
AGGAACAGTCCCATGAAGAG+AGG 0.537205 4_1:+57561463 None:intergenic
GGAAGCAATGGCGGTGCAAG+AGG 0.539340 4_1:-57566567 Msa0558610:CDS
AAGTGGGAGATAAGGTAAGA+AGG 0.541666 4_1:+57560367 None:intergenic
GAAGCTGTCATCATTCCTGC+TGG 0.541668 4_1:-57560995 Msa0558610:CDS
TGCCCTCCTACGGAGCTTGG+TGG 0.541670 4_1:-57563691 Msa0558610:CDS
TGCCCTCCTACGGAGCTTGG+TGG 0.541670 4_1:-57563796 Msa0558610:CDS
TTAGAATTCCTTATCTGGTA+CGG 0.541730 4_1:+57560968 None:intergenic
CAGGAACAAGAAACTGTTGT+TGG 0.541774 4_1:-57566421 Msa0558610:CDS
TTGAGGAGAGAATTACCAAA+TGG 0.544573 4_1:-57566085 Msa0558610:CDS
CGTCCACCAAGCTCCGTAGG+AGG 0.545713 4_1:+57563793 None:intergenic
CATCCACCAAGCTCCGTAGG+AGG 0.545730 4_1:+57563583 None:intergenic
ATTATCACATGCTGAAGAAA+CGG 0.546233 4_1:-57561651 Msa0558610:CDS
TGCCCTCCTATGGAGCTTGG+TGG 0.548275 4_1:-57564108 Msa0558610:CDS
CTCGACTTTACTCAGAGAGA+TGG 0.548603 4_1:-57563524 Msa0558610:CDS
GATATCACCAGCTTCGACGC+CGG 0.549960 4_1:-57566053 Msa0558610:CDS
TTACCTGAACGGGAAGTGAA+AGG 0.550425 4_1:-57561680 Msa0558610:CDS
GTGAGATTCATTATCTTCAA+GGG 0.550820 4_1:-57566519 Msa0558610:CDS
CAGGTCCAAGAATATTGATA+GGG 0.551000 4_1:-57565951 Msa0558610:CDS
CAAGTTGTTCTGTAGAGAGA+GGG 0.552992 4_1:+57561771 None:intergenic
GGGAAAAGGCCAGCCTATAG+TGG 0.553086 4_1:-57563284 Msa0558610:CDS
ACTTATAAATGGATTAATCT+CGG 0.553401 4_1:-57560303 Msa0558610:three_prime_UTR
CTCCGGTGCGGAAGAACCGA+CGG 0.554178 4_1:-57566589 Msa0558610:CDS
CACTAGAAAAGAAGTTAAGA+AGG 0.555039 4_1:-57565144 Msa0558610:CDS
AAGTAGTAGTTAAATCAAGC+AGG 0.556864 4_1:+57564178 None:intergenic
TACCTGAACGGGAAGTGAAA+GGG 0.557390 4_1:-57561679 Msa0558610:CDS
TTCTCGGGAAAATTTAGATG+AGG 0.558134 4_1:+57566674 None:intergenic
TGAGCACTTTCAGAAACACT+GGG 0.558873 4_1:-57563305 Msa0558610:CDS
TCTCACAACATCTTAAGCAT+AGG 0.559014 4_1:+57564526 None:intergenic
TCACATCCACCAACCTCCAT+AGG 0.559920 4_1:+57564312 None:intergenic
GAGCTTGGTGAATCTAGTAC+AGG 0.562985 4_1:-57563889 Msa0558610:CDS
AAGTAGCAGTTAAATCAAGC+AGG 0.563193 4_1:+57563761 None:intergenic
GGCGACCGAGGAGCTTCTAC+CGG 0.563905 4_1:-57566617 Msa0558610:CDS
TTACCGAGTATGGGGAAAGA+AGG 0.564549 4_1:-57561617 Msa0558610:CDS
ATCTGGTACGGACAACCAGC+AGG 0.564576 4_1:+57560980 None:intergenic
CGTCCACCAAGCTCCATAGG+AGG 0.565651 4_1:+57564105 None:intergenic
GTCTTCGAAAGACATCCCAC+TGG 0.565818 4_1:+57561363 None:intergenic
TGCAAGTCCGTTGACAAACT+GGG 0.566613 4_1:+57565117 None:intergenic
TTCGTCCGGTAGAAGCTCCT+CGG 0.566731 4_1:+57566612 None:intergenic
GTCCACCAAGCTCCGTAGGA+GGG 0.566976 4_1:+57563794 None:intergenic
GATTCACCAAGCTCCGTAGG+AGG 0.568187 4_1:+57563898 None:intergenic
GATCAGAAGGACATTTGTTG+CGG 0.571621 4_1:-57564405 Msa0558610:CDS
AAAAGTATCATGCCCTCCTA+CGG 0.573066 4_1:-57563701 Msa0558610:CDS
AAAAGTATCATGCCCTCCTA+CGG 0.573066 4_1:-57563911 Msa0558610:CDS
TACTCATGACTCTCACAAGA+AGG 0.573176 4_1:-57561285 Msa0558610:CDS
GAAGAACCGACGGGAAGCAA+TGG 0.573561 4_1:-57566579 Msa0558610:CDS
CATCCACCAAGCTCCATAGG+AGG 0.573573 4_1:+57564210 None:intergenic
CGTCCACCAAGCTCCGTAGG+AGG 0.574916 4_1:+57563688 None:intergenic
CGTCCATCAAGCTCCGTAGG+AGG 0.574916 4_1:+57564003 None:intergenic
TGGACTTTCCAGCAACATGT+TGG 0.575890 4_1:-57561019 Msa0558610:CDS
GTCCATCAAGCTCCGTAGGA+GGG 0.576712 4_1:+57564004 None:intergenic
AAAAGGATCATGCCCTCCTA+CGG 0.576719 4_1:-57564016 Msa0558610:CDS
TGCCGTCCTATGGAGGTTGG+TGG 0.576769 4_1:-57564318 Msa0558610:CDS
CTAGATTCACCAAGCTCCGT+AGG 0.578422 4_1:+57563895 None:intergenic
CTACTTCAACATTGCCTGAG+AGG 0.580462 4_1:-57564161 Msa0558610:CDS
GCAAGTTGTTCTGTAGAGAG+AGG 0.581333 4_1:+57561770 None:intergenic
TGAGCATTCAGGTGCCCAGT+GGG 0.583742 4_1:-57561378 Msa0558610:CDS
AAAATCTTCATCGGCGACCG+AGG 0.584811 4_1:-57566629 Msa0558610:CDS
TCATGCCGTCCTATGGAGGT+TGG 0.585483 4_1:-57564321 Msa0558610:CDS
TAATATTATGACACATTCTG+CGG 0.586792 4_1:-57561798 Msa0558610:CDS
ATATTTCCCAGGACGGAGAA+CGG 0.587382 4_1:-57561508 Msa0558610:CDS
CTTCTATGAAGATCCAAGAC+AGG 0.588015 4_1:+57564570 None:intergenic
ATTTATTTCAGCTTCAGGGA+AGG 0.588154 4_1:+57560246 None:intergenic
TAACAGTTAGAGCTTTCAGC+GGG 0.588178 4_1:+57561416 None:intergenic
CATATACAACAATATTTCCC+AGG 0.588215 4_1:-57561519 Msa0558610:CDS
CATCTTGGACCACTATAGGC+TGG 0.588424 4_1:+57563275 None:intergenic
ACTCATTGTGATGTGAAAGT+TGG 0.588649 4_1:-57566010 Msa0558610:CDS
ATGGACCAAGCTTGAAGAAG+GGG 0.588816 4_1:-57565817 Msa0558610:CDS
AAAAGTATCATGCCCTCCTA+CGG 0.589079 4_1:-57563596 Msa0558610:CDS
AAAAGTATCATGCCCTCCTA+CGG 0.589079 4_1:-57563806 Msa0558610:CDS
TTGCAGAAAGCAGCTGAGAG+AGG 0.589642 4_1:-57563388 Msa0558610:CDS
GTCCACCAAGCTCCGTAGGA+GGG 0.589803 4_1:+57563689 None:intergenic
TTATTCGCTTTAGTAATGGA+AGG 0.590215 4_1:+57564877 None:intergenic
ACATGTTGCTGGAAAGTCCA+TGG 0.592328 4_1:+57561022 None:intergenic
CCACATCCACCAAGCTCCGT+AGG 0.593986 4_1:+57563580 None:intergenic
AATGGCGAGAAAATCTTCAT+CGG 0.597998 4_1:-57566638 Msa0558610:CDS
CTAGGTGACAAATTGGTGGT+AGG 0.600866 4_1:+57561443 None:intergenic
TCTCGTCCACCAAGCTCCGT+AGG 0.600890 4_1:+57563685 None:intergenic
TCAGAGAAAGCGTAAGAACA+AGG 0.600918 4_1:-57566452 Msa0558610:CDS
AGCATTAGTATACAACAAAG+TGG 0.601153 4_1:+57560350 None:intergenic
ATCCTGTTTGGATTGGTGTG+AGG 0.602391 4_1:-57563149 Msa0558610:intron
ATTCACCAAGCTCCGTAGGA+GGG 0.603465 4_1:+57563899 None:intergenic
CCACTGATGTCCAAAACTGT+AGG 0.606253 4_1:+57563337 None:intergenic
TCTCGTCCATCAAGCTCCGT+AGG 0.606493 4_1:+57564000 None:intergenic
GTCCACCAAGCTCCATAGGA+GGG 0.609017 4_1:+57564106 None:intergenic
CTACTGAGCTGTTACCTGAA+CGG 0.609446 4_1:-57561691 Msa0558610:CDS
GCACCGCCATTGCTTCCCGT+CGG 0.609777 4_1:+57566573 None:intergenic
AGGCGTGCCCAGTTTGTCAA+CGG 0.610240 4_1:-57565124 Msa0558610:CDS
AGCATCATGCCGTCCTATGG+AGG 0.610243 4_1:-57564325 Msa0558610:CDS
ATCCACCAAGCTCCGTAGGA+GGG 0.611716 4_1:+57563584 None:intergenic
TATGGACCAAGCTTGAAGAA+GGG 0.612850 4_1:-57565818 Msa0558610:CDS
GCATTAGTATACAACAAAGT+GGG 0.614047 4_1:+57560351 None:intergenic
CATCTCTCTGAGTAAAGTCG+AGG 0.614260 4_1:+57563525 None:intergenic
GAGGTTGGTGGATGTGACAC+AGG 0.614766 4_1:-57564306 Msa0558610:CDS
ATCTCTCTGAGTAAAGTCGA+GGG 0.615126 4_1:+57563526 None:intergenic
CAATGTGGAAGAAACAGTTA+GGG 0.617044 4_1:-57566392 Msa0558610:CDS
ATCCACCAAGCTCCATAGGA+GGG 0.617732 4_1:+57564211 None:intergenic
CCAGTGTTCGAGTTGCCACA+AGG 0.618744 4_1:-57565741 Msa0558610:CDS
GAACCGACGGGAAGCAATGG+CGG 0.620984 4_1:-57566576 Msa0558610:CDS
ACACAAACTCCAATACCGCA+TGG 0.621779 4_1:+57560735 None:intergenic
AAATGCATAATAAATCAAGA+AGG 0.623493 4_1:+57563551 None:intergenic
TACAACAATATTTCCCAGGA+CGG 0.625560 4_1:-57561515 Msa0558610:CDS
TATTCACAAAATGAGACTGA+AGG 0.630664 4_1:-57561150 Msa0558610:CDS
ACTTCTAGGTGACAAATTGG+TGG 0.632206 4_1:+57561439 None:intergenic
CAAACTCATTAAGATCTGGA+AGG 0.632399 4_1:-57560327 Msa0558610:three_prime_UTR
ATCCACCAACCTCCATAGGA+CGG 0.633695 4_1:+57564316 None:intergenic
TCCCGTCCACCAAGCTCCGT+AGG 0.634155 4_1:+57563790 None:intergenic
GGAACAGTCCCATGAAGAGA+GGG 0.635259 4_1:+57561464 None:intergenic
AGTTGATTGACGAGGTCAGA+CGG 0.635385 4_1:-57560685 Msa0558610:CDS
TGAACAGTGGATTCCAACTG+AGG 0.636045 4_1:+57563233 None:intergenic
TGTTGTGAGAAATTATGTCA+AGG 0.636724 4_1:-57564513 Msa0558610:CDS
GTCAATCAACTGGATACACT+CGG 0.642101 4_1:+57560697 None:intergenic
CAACTTCAACATTGCCCCAG+AGG 0.647616 4_1:-57564371 Msa0558610:CDS
TGTTGTTGGTGTTGACAATG+TGG 0.649587 4_1:-57566407 Msa0558610:CDS
CTACTTCAACATTGCCCGAG+AGG 0.649882 4_1:-57563744 Msa0558610:CDS
CTACTTCAACATTGCCCGAG+AGG 0.649882 4_1:-57563849 Msa0558610:CDS
TCCGGTGCGGAAGAACCGAC+GGG 0.650388 4_1:-57566588 Msa0558610:CDS
AGCAAAAGTAGACAAGCTTG+AGG 0.653326 4_1:-57560645 Msa0558610:intron
CTACTTCAACGTCGCCCGAG+AGG 0.654189 4_1:-57563639 Msa0558610:CDS
TCTTCGAAAGACATCCCACT+GGG 0.657045 4_1:+57561364 None:intergenic
CTGAGCATTCAGGTGCCCAG+TGG 0.657262 4_1:-57561379 Msa0558610:CDS
CTCGCAGGAACAGAACCAGA+AGG 0.658573 4_1:+57566283 None:intergenic
CTACTACTTCGTTGCCCGAG+AGG 0.660353 4_1:-57564059 Msa0558610:CDS
TTCTTGGACCTGAAGTAATG+CGG 0.661293 4_1:+57565962 None:intergenic
TCACAAAATGAGACTGAAGG+AGG 0.663151 4_1:-57561147 Msa0558610:CDS
TCATTACCATTTGTCCTCTG+GGG 0.668041 4_1:+57564357 None:intergenic
ATATCGATCAGTATTAAGGT+CGG 0.668458 4_1:+57563417 None:intergenic
CTTCTGGTTCTGTTCCTGCG+AGG 0.671527 4_1:-57566282 Msa0558610:CDS
GCGGTGCAAGAGGAGAGTGA+TGG 0.671559 4_1:-57566557 Msa0558610:CDS
ATAACAGTTAGAGCTTTCAG+CGG 0.672646 4_1:+57561415 None:intergenic
TGAACGGGAAGTGAAAGGGA+TGG 0.677958 4_1:-57561675 Msa0558610:CDS
TGCTTGGCAAGTGAAAGTAA+TGG 0.699374 4_1:-57565083 Msa0558610:CDS
TAAGTACAGAACATGAACAG+TGG 0.701247 4_1:+57563220 None:intergenic
GTGTATCCAGTTGATTGACG+AGG 0.702237 4_1:-57560693 Msa0558610:CDS
CTACCGGACGAACTCCGGTG+CGG 0.702661 4_1:-57566601 Msa0558610:CDS
TATTACCAGAGATTGAACCA+TGG 0.720180 4_1:-57561039 Msa0558610:intron
GAGCACTTTCAGAAACACTG+GGG 0.743918 4_1:-57563304 Msa0558610:CDS
TCTGCAGTGTTGTGTCCATG+CGG 0.768724 4_1:-57560750 Msa0558610:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAATTCATTTTTATATATT+AGG + chr4_1:57564738-57564757 None:intergenic 10.0%
!! CTAATATATAAAAATGAATT+TGG - chr4_1:57564736-57564755 Msa0558610:intron 10.0%
!!! TTATAATAAGCATTTAAAAT+TGG - chr4_1:57564914-57564933 Msa0558610:CDS 10.0%
!!! TCATTTTTATATATTAGGAT+TGG + chr4_1:57564733-57564752 None:intergenic 15.0%
!!! ATTGAAAATTGAGATTTTCT+CGG + chr4_1:57560217-57560236 None:intergenic 20.0%
!! TTTCTTATTCTTCTTCTTAT+TGG + chr4_1:57560704-57560723 None:intergenic 20.0%
!!! CTGAAATAACTCTTTTATTT+AGG - chr4_1:57561023-57561042 Msa0558610:CDS 20.0%
!! TTATTCTTACATTCATTTAC+TGG - chr4_1:57561190-57561209 Msa0558610:CDS 20.0%
!! TATAGTAAAAACATAGTTAG+AGG - chr4_1:57561416-57561435 Msa0558610:CDS 20.0%
!! AATATAATGATTCACTAGTA+AGG + chr4_1:57561544-57561563 None:intergenic 20.0%
!! TGCAAATCAAATAATGAAAA+TGG + chr4_1:57561971-57561990 None:intergenic 20.0%
!! CTATTAAAAAAATGTCAATC+TGG - chr4_1:57562236-57562255 Msa0558610:intron 20.0%
!! AAATGCATAATAAATCAAGA+AGG + chr4_1:57563324-57563343 None:intergenic 20.0%
!!! TTGTTAAGTGTGTTTTTTAT+TGG - chr4_1:57563959-57563978 Msa0558610:CDS 20.0%
!! AAAATAAAGTCTTAAATGCA+GGG + chr4_1:57564371-57564390 None:intergenic 20.0%
!! TAAAGTGATTTCAACTATAA+TGG - chr4_1:57564413-57564432 Msa0558610:CDS 20.0%
!! ATTGATAAATCATTTGCAAA+AGG + chr4_1:57566007-57566026 None:intergenic 20.0%
!! TATCATGATTTACACTAATA+AGG - chr4_1:57566026-57566045 Msa0558610:CDS 20.0%
!! ACTACAAGAATAATGTAAAT+TGG + chr4_1:57566277-57566296 None:intergenic 20.0%
!!! ATTCTTGTAGTTTTTTTTTG+AGG - chr4_1:57566286-57566305 Msa0558610:CDS 20.0%
!!! TTCTTGTAGTTTTTTTTTGA+GGG - chr4_1:57566287-57566306 Msa0558610:CDS 20.0%
!!! ACTTATAAATGGATTAATCT+CGG - chr4_1:57566569-57566588 Msa0558610:CDS 20.0%
!! AACATCATACAATACAAATA+AGG + chr4_1:57566602-57566621 None:intergenic 20.0%
!! ATATATTTATTTCAGCTTCA+GGG + chr4_1:57566633-57566652 None:intergenic 20.0%
!! AATATATTTATTTCAGCTTC+AGG + chr4_1:57566634-57566653 None:intergenic 20.0%
!! GAAGCTGAAATAAATATATT+TGG - chr4_1:57566634-57566653 Msa0558610:CDS 20.0%
!! TTGAAAATTGAGATTTTCTC+GGG + chr4_1:57560216-57560235 None:intergenic 25.0%
!! GAGAAAATCTCAATTTTCAA+TGG - chr4_1:57560216-57560235 Msa0558610:three_prime_UTR 25.0%
! ACAATTGGATCTTATAAGAA+TGG - chr4_1:57560639-57560658 Msa0558610:intron 25.0%
! GAAAAAGAAGATGAAGAAAA+AGG - chr4_1:57560720-57560739 Msa0558610:CDS 25.0%
! AAAGGTAATTAAAGAAGAAG+TGG - chr4_1:57560738-57560757 Msa0558610:CDS 25.0%
!!! GAATTGCATGATTTTAAAGA+AGG - chr4_1:57560760-57560779 Msa0558610:intron 25.0%
!!! TTGCTGATTTTGATTCTATA+GGG - chr4_1:57561328-57561347 Msa0558610:CDS 25.0%
! TAAAAACATAGTTAGAGGTT+AGG - chr4_1:57561421-57561440 Msa0558610:CDS 25.0%
! TCTCTTAAGAAAATCAAAAG+GGG + chr4_1:57561447-57561466 None:intergenic 25.0%
! CTCTCTTAAGAAAATCAAAA+GGG + chr4_1:57561448-57561467 None:intergenic 25.0%
! TCTCTCTTAAGAAAATCAAA+AGG + chr4_1:57561449-57561468 None:intergenic 25.0%
!! CAAAACTTTTTGACACAAAT+AGG - chr4_1:57561697-57561716 Msa0558610:CDS 25.0%
! GAAACAGAAGCAAAAATTAA+AGG - chr4_1:57562041-57562060 Msa0558610:intron 25.0%
! AAGTAGCAGTTAAATCAAAT+AGG + chr4_1:57562592-57562611 None:intergenic 25.0%
! GATTATATCGATCAGTATTA+AGG + chr4_1:57563462-57563481 None:intergenic 25.0%
!!! TGATAGTGTTAACCTTTTTT+GGG + chr4_1:57563818-57563837 None:intergenic 25.0%
!!! ATGATAGTGTTAACCTTTTT+TGG + chr4_1:57563819-57563838 None:intergenic 25.0%
!!! TTAGTTGTTCCTTTTGATTA+TGG - chr4_1:57563903-57563922 Msa0558610:CDS 25.0%
! GAAAATAAAGTCTTAAATGC+AGG + chr4_1:57564372-57564391 None:intergenic 25.0%
!! ATTTCCTTTGATATTTGCTA+CGG - chr4_1:57564444-57564463 Msa0558610:CDS 25.0%
!!! AGATTGTTTTGTGCAATATA+AGG - chr4_1:57564567-57564586 Msa0558610:CDS 25.0%
! AATGTGTCATAATATTAACC+TGG + chr4_1:57565071-57565090 None:intergenic 25.0%
! TAATATTATGACACATTCTG+CGG - chr4_1:57565074-57565093 Msa0558610:CDS 25.0%
! ACAATTCCAAAAAATTTCCA+CGG + chr4_1:57565634-57565653 None:intergenic 25.0%
! GTGAGTTAATCAAGTTATAT+AGG + chr4_1:57565806-57565825 None:intergenic 25.0%
! GTTGTATATAGAATTTGACA+AGG - chr4_1:57566326-57566345 Msa0558610:CDS 25.0%
! TTCTAAATAGGTGAAGAAAA+TGG - chr4_1:57566367-57566386 Msa0558610:CDS 25.0%
!! TCTCTGTCTGTTTTTCATTT+AGG - chr4_1:57560152-57560171 Msa0558610:three_prime_UTR 30.0%
TGTGAGATTCATTATCTTCA+AGG - chr4_1:57560352-57560371 Msa0558610:three_prime_UTR 30.0%
GTGAGATTCATTATCTTCAA+GGG - chr4_1:57560353-57560372 Msa0558610:three_prime_UTR 30.0%
GGTAGAAAAAGAGTTCAAAA+TGG - chr4_1:57560501-57560520 Msa0558610:intron 30.0%
! GGATCTTATAAGAATGGTTT+TGG - chr4_1:57560645-57560664 Msa0558610:intron 30.0%
!! ATTTTAAAGAAGGTGAGTTG+AGG - chr4_1:57560770-57560789 Msa0558610:intron 30.0%
AGAATTACCAAATGGAGTAA+TGG - chr4_1:57560795-57560814 Msa0558610:intron 30.0%
!! TTTATTTAGGTTGTGCCTTA+TGG - chr4_1:57561036-57561055 Msa0558610:intron 30.0%
GATTTAAAGAATCACTTCTC+TGG + chr4_1:57561107-57561126 None:intergenic 30.0%
GCTTTGATTGTATAAGAGAT+CGG - chr4_1:57561163-57561182 Msa0558610:CDS 30.0%
!! TGCTGAATTTGTTACTTTGT+TGG - chr4_1:57561261-57561280 Msa0558610:intron 30.0%
!!! CTTGCTGATTTTGATTCTAT+AGG - chr4_1:57561327-57561346 Msa0558610:CDS 30.0%
! TATGTGCTCTGTTATTCTTT+TGG - chr4_1:57561354-57561373 Msa0558610:CDS 30.0%
! ATGTGCTCTGTTATTCTTTT+GGG - chr4_1:57561355-57561374 Msa0558610:CDS 30.0%
! ATTTTCTTAAGAGAGATGTG+TGG - chr4_1:57561453-57561472 Msa0558610:CDS 30.0%
AATTCTCAATTCAAGAGCAA+CGG + chr4_1:57561659-57561678 None:intergenic 30.0%
CACTAGAAAAGAAGTTAAGA+AGG - chr4_1:57561728-57561747 Msa0558610:CDS 30.0%
!! TCTACTTTTGCTAGACAAAT+AGG + chr4_1:57561934-57561953 None:intergenic 30.0%
! TTATTCGCTTTAGTAATGGA+AGG + chr4_1:57561998-57562017 None:intergenic 30.0%
TCACTTATTCGCTTTAGTAA+TGG + chr4_1:57562002-57562021 None:intergenic 30.0%
TTCTGATATTCAAATCAAGC+AGG - chr4_1:57562161-57562180 Msa0558610:intron 30.0%
CAAATCAAGCAGGTTAAATT+TGG - chr4_1:57562171-57562190 Msa0558610:intron 30.0%
GTTACAGTGAAAATATTTGC+TGG - chr4_1:57562193-57562212 Msa0558610:intron 30.0%
TGTTGTGAGAAATTATGTCA+AGG - chr4_1:57562359-57562378 Msa0558610:intron 30.0%
AAGTAGTAGTTAAATCAAGC+AGG + chr4_1:57562697-57562716 None:intergenic 30.0%
AATTGTAATGACAGCGAAAA+AGG - chr4_1:57562737-57562756 Msa0558610:intron 30.0%
AATTGTAATGACAGCGAAAA+AGG - chr4_1:57562737-57562756 Msa0558610:intron 30.0%
! TTTTTCGCTCTCACTAAAAT+TGG + chr4_1:57562945-57562964 None:intergenic 30.0%
ATCATTACAATTTGTCCTCT+CGG + chr4_1:57563041-57563060 None:intergenic 30.0%
ATCATTACAATTTGTCCTCT+CGG + chr4_1:57563041-57563060 None:intergenic 30.0%
ATATCGATCAGTATTAAGGT+CGG + chr4_1:57563458-57563477 None:intergenic 30.0%
AAAGAAGTTTGACGTATGAT+TGG + chr4_1:57563761-57563780 None:intergenic 30.0%
!! TTTTGATTATGGCCATACTA+GGG - chr4_1:57563914-57563933 Msa0558610:CDS 30.0%
! CACACTTAACAATAGCATTT+TGG + chr4_1:57563951-57563970 None:intergenic 30.0%
!!! TAAGTGTGTTTTTTATTGGC+AGG - chr4_1:57563963-57563982 Msa0558610:CDS 30.0%
! AACATTAGGCAGTATTTTAC+CGG - chr4_1:57563994-57564013 Msa0558610:CDS 30.0%
AAACTGCTCTTTGAATACTT+GGG + chr4_1:57564088-57564107 None:intergenic 30.0%
ATTACTTCAGAAAAATGAGC+TGG + chr4_1:57564111-57564130 None:intergenic 30.0%
CCATACGAAATATAGACATA+TGG + chr4_1:57564231-57564250 None:intergenic 30.0%
CCATATGTCTATATTTCGTA+TGG - chr4_1:57564228-57564247 Msa0558610:CDS 30.0%
AGATGAACAGTAACATAACA+AGG + chr4_1:57564320-57564339 None:intergenic 30.0%
GAATCAGAAATAGAACCAAT+AGG + chr4_1:57564781-57564800 None:intergenic 30.0%
! AAGGAAATGACTAGGTTTTT+CGG + chr4_1:57564860-57564879 None:intergenic 30.0%
CAGAACAACTTGCAAAAATA+AGG - chr4_1:57565112-57565131 Msa0558610:CDS 30.0%
ATTATCACATGCTGAAGAAA+CGG - chr4_1:57565221-57565240 Msa0558610:intron 30.0%
CATATACAACAATATTTCCC+AGG - chr4_1:57565353-57565372 Msa0558610:intron 30.0%
TTAATGTATTCTACGAGCTT+TGG + chr4_1:57565543-57565562 None:intergenic 30.0%
!!! ACAATTCCGTGGAAATTTTT+TGG - chr4_1:57565625-57565644 Msa0558610:intron 30.0%
! AAAATGCTCTGATCTAGAAT+TGG + chr4_1:57565693-57565712 None:intergenic 30.0%
! TCAGTCTCATTTTGTGAATA+TGG + chr4_1:57565722-57565741 None:intergenic 30.0%
TATTCACAAAATGAGACTGA+AGG - chr4_1:57565722-57565741 Msa0558610:CDS 30.0%
TTAGAATTCCTTATCTGGTA+CGG + chr4_1:57565907-57565926 None:intergenic 30.0%
! TTTTCCTGCGATTTCTAAAT+AGG - chr4_1:57566355-57566374 Msa0558610:CDS 30.0%
GCATTAGTATACAACAAAGT+GGG + chr4_1:57566524-57566543 None:intergenic 30.0%
AGCATTAGTATACAACAAAG+TGG + chr4_1:57566525-57566544 None:intergenic 30.0%
!! ATCTGGAAGGTACTTATAAA+TGG - chr4_1:57566558-57566577 Msa0558610:CDS 30.0%
TTCTCGGGAAAATTTAGATG+AGG + chr4_1:57560201-57560220 None:intergenic 35.0%
AATGGCGAGAAAATCTTCAT+CGG - chr4_1:57560234-57560253 Msa0558610:three_prime_UTR 35.0%
GCATCGTCAATATAGAGAAA+AGG - chr4_1:57560378-57560397 Msa0558610:three_prime_UTR 35.0%
TAAGAACAAGGAAGAAGAAC+AGG - chr4_1:57560432-57560451 Msa0558610:exon 35.0%
ACAATGTGGAAGAAACAGTT+AGG - chr4_1:57560479-57560498 Msa0558610:CDS 35.0%
CAATGTGGAAGAAACAGTTA+GGG - chr4_1:57560480-57560499 Msa0558610:CDS 35.0%
GAAGCAATGTGATACACAAT+TGG - chr4_1:57560624-57560643 Msa0558610:intron 35.0%
TTGAGGAGAGAATTACCAAA+TGG - chr4_1:57560787-57560806 Msa0558610:intron 35.0%
GATATCTCCATTACTCCATT+TGG + chr4_1:57560805-57560824 None:intergenic 35.0%
! CCCACATTTTTATAATCACC+CGG + chr4_1:57560841-57560860 None:intergenic 35.0%
CCGGGTGATTATAAAAATGT+GGG - chr4_1:57560838-57560857 Msa0558610:intron 35.0%
CGGGTGATTATAAAAATGTG+GGG - chr4_1:57560839-57560858 Msa0558610:intron 35.0%
ACTCATTGTGATGTGAAAGT+TGG - chr4_1:57560862-57560881 Msa0558610:intron 35.0%
TCAGGTCCAAGAATATTGAT+AGG - chr4_1:57560920-57560939 Msa0558610:intron 35.0%
CAGGTCCAAGAATATTGATA+GGG - chr4_1:57560921-57560940 Msa0558610:intron 35.0%
AGCAACCCTATCAATATTCT+TGG + chr4_1:57560929-57560948 None:intergenic 35.0%
AATATTGATAGGGTTGCTCT+TGG - chr4_1:57560931-57560950 Msa0558610:intron 35.0%
ATATTGATAGGGTTGCTCTT+GGG - chr4_1:57560932-57560951 Msa0558610:intron 35.0%
GAATTCTCATCATGCATTGT+AGG - chr4_1:57561283-57561302 Msa0558610:CDS 35.0%
! TGTGCTCTGTTATTCTTTTG+GGG - chr4_1:57561356-57561375 Msa0558610:CDS 35.0%
GCAGAAATAGTAATACCAGA+TGG - chr4_1:57561582-57561601 Msa0558610:CDS 35.0%
CAAATCATCATTGATCCATC+TGG + chr4_1:57561600-57561619 None:intergenic 35.0%
AAGTAATGGCAGTGAAAGTA+AGG - chr4_1:57561803-57561822 Msa0558610:CDS 35.0%
AAGTAAGGACAGTGAAAGTA+AGG - chr4_1:57561818-57561837 Msa0558610:intron 35.0%
TAGATGTCATGTTGTGTAAC+AGG - chr4_1:57562129-57562148 Msa0558610:intron 35.0%
AGATGTCATGTTGTGTAACA+GGG - chr4_1:57562130-57562149 Msa0558610:intron 35.0%
GGTTGTTAACTAATGTTCTC+TGG - chr4_1:57562257-57562276 Msa0558610:intron 35.0%
TCTCACAACATCTTAAGCAT+AGG + chr4_1:57562349-57562368 None:intergenic 35.0%
TTATGTCAAGGAAGAACTTC+TGG - chr4_1:57562371-57562390 Msa0558610:intron 35.0%
TGTCCTTCTGATCCAAAATA+CGG + chr4_1:57562460-57562479 None:intergenic 35.0%
ATCATTACCATTTGTCCTCT+GGG + chr4_1:57562519-57562538 None:intergenic 35.0%
TATCATTACCATTTGTCCTC+TGG + chr4_1:57562520-57562539 None:intergenic 35.0%
TCATTACAATTTGTACGCTC+AGG + chr4_1:57562623-57562642 None:intergenic 35.0%
TCATTACAATTTGTCCTCTC+AGG + chr4_1:57562728-57562747 None:intergenic 35.0%
TCATTACAATTTGTCCTCTC+GGG + chr4_1:57562728-57562747 None:intergenic 35.0%
GTCATTACAATTTGTCCTCT+CGG + chr4_1:57562729-57562748 None:intergenic 35.0%
TCACTAAAATTGGTCATCTC+GGG + chr4_1:57562935-57562954 None:intergenic 35.0%
CTCACTAAAATTGGTCATCT+CGG + chr4_1:57562936-57562955 None:intergenic 35.0%
TCATTACAATTTGTCCTCTC+GGG + chr4_1:57562728-57562747 None:intergenic 35.0%
AAGTAGCAGTTAAATCAAGC+AGG + chr4_1:57562904-57562923 None:intergenic 35.0%
TCATTACAATTTGTCCTCTC+GGG + chr4_1:57562728-57562747 None:intergenic 35.0%
TCATTACAATTTGTCCTCTC+GGG + chr4_1:57562728-57562747 None:intergenic 35.0%
GTCATTACAATTTGTCCTCT+CGG + chr4_1:57562729-57562748 None:intergenic 35.0%
CTATGACTTTCCTGAAACTT+CGG - chr4_1:57563399-57563418 Msa0558610:CDS 35.0%
! GAACTTTTATCCGAAGTTTC+AGG + chr4_1:57563412-57563431 None:intergenic 35.0%
!!! CTTGTTTTGTCCTACAGTTT+TGG - chr4_1:57563525-57563544 Msa0558610:CDS 35.0%
AACTGAGGTTTGATGTACTT+TGG + chr4_1:57563627-57563646 None:intergenic 35.0%
AAAGTACATCAAACCTCAGT+TGG - chr4_1:57563626-57563645 Msa0558610:CDS 35.0%
TAAGTACAGAACATGAACAG+TGG + chr4_1:57563655-57563674 None:intergenic 35.0%
AGAGTTACTTGAATCCTGTT+TGG - chr4_1:57563711-57563730 Msa0558610:CDS 35.0%
TACTTGAATCCTGTTTGGAT+TGG - chr4_1:57563716-57563735 Msa0558610:CDS 35.0%
ACTTCTGTTTGACCCAAAAA+AGG - chr4_1:57563803-57563822 Msa0558610:CDS 35.0%
CTAGTATGGCCATAATCAAA+AGG + chr4_1:57563915-57563934 None:intergenic 35.0%
!! CTTTTGATTATGGCCATACT+AGG - chr4_1:57563913-57563932 Msa0558610:CDS 35.0%
!!! ACAATAGCATTTTGGTTCGA+TGG + chr4_1:57563943-57563962 None:intergenic 35.0%
! ACATTAGGCAGTATTTTACC+GGG - chr4_1:57563995-57564014 Msa0558610:CDS 35.0%
GAAACTGCTCTTTGAATACT+TGG + chr4_1:57564089-57564108 None:intergenic 35.0%
GGATTCATGTATTCTTGAAC+TGG + chr4_1:57564144-57564163 None:intergenic 35.0%
CCACATTAAGTTATCACGAT+AGG + chr4_1:57564495-57564514 None:intergenic 35.0%
CCTATCGTGATAACTTAATG+TGG - chr4_1:57564492-57564511 Msa0558610:CDS 35.0%
TGAAAGAATAAGCATCCTCA+TGG - chr4_1:57564526-57564545 Msa0558610:CDS 35.0%
ATTGCACAAAGGAAATGACT+AGG + chr4_1:57564868-57564887 None:intergenic 35.0%
! TATTTTGTGTCTGTGATTCC+AGG - chr4_1:57565050-57565069 Msa0558610:intron 35.0%
ACAAAAAGGTTTACCGAGTA+TGG - chr4_1:57565245-57565264 Msa0558610:intron 35.0%
CAAAAAGGTTTACCGAGTAT+GGG - chr4_1:57565246-57565265 Msa0558610:intron 35.0%
AAAAAGGTTTACCGAGTATG+GGG - chr4_1:57565247-57565266 Msa0558610:intron 35.0%
! AAGAAGGAATCGAGTTTTTC+AGG - chr4_1:57565271-57565290 Msa0558610:intron 35.0%
TACAACAATATTTCCCAGGA+CGG - chr4_1:57565357-57565376 Msa0558610:intron 35.0%
ATAACAGTTAGAGCTTTCAG+CGG + chr4_1:57565460-57565479 None:intergenic 35.0%
AAAAAGTTCACTGAGCATTC+AGG - chr4_1:57565483-57565502 Msa0558610:intron 35.0%
TTCAATGTTAGACAATTCCG+TGG - chr4_1:57565614-57565633 Msa0558610:intron 35.0%
! GATATTTTCTTGTCTGCAGA+TGG - chr4_1:57565662-57565681 Msa0558610:intron 35.0%
CAATCTCTGGTAATAATGAC+AGG + chr4_1:57565828-57565847 None:intergenic 35.0%
TATTACCAGAGATTGAACCA+TGG - chr4_1:57565833-57565852 Msa0558610:intron 35.0%
GTACCAGATAAGGAATTCTA+AGG - chr4_1:57565906-57565925 Msa0558610:intron 35.0%
AGACCTTAGAATTCCTTATC+TGG + chr4_1:57565912-57565931 None:intergenic 35.0%
! ACTTTTGCTTTATGGTCTTC+AGG + chr4_1:57566216-57566235 None:intergenic 35.0%
!! GCTTGTCTACTTTTGCTTTA+TGG + chr4_1:57566224-57566243 None:intergenic 35.0%
TTCACCTATTTAGAAATCGC+AGG + chr4_1:57566362-57566381 None:intergenic 35.0%
! ATCATGTTTTGCATGTAAGC+TGG + chr4_1:57566430-57566449 None:intergenic 35.0%
CATAAAGACTTCAGTCTTAG+AGG + chr4_1:57566479-57566498 None:intergenic 35.0%
ATACAACAAAGTGGGAGATA+AGG + chr4_1:57566516-57566535 None:intergenic 35.0%
TGCTCAAACTCATTAAGATC+TGG - chr4_1:57566541-57566560 Msa0558610:CDS 35.0%
CAAACTCATTAAGATCTGGA+AGG - chr4_1:57566545-57566564 Msa0558610:CDS 35.0%
ATTTATTTCAGCTTCAGGGA+AGG + chr4_1:57566629-57566648 None:intergenic 35.0%
! TCAGAGAAAGCGTAAGAACA+AGG - chr4_1:57560420-57560439 Msa0558610:three_prime_UTR 40.0%
CAGGAACAAGAAACTGTTGT+TGG - chr4_1:57560451-57560470 Msa0558610:CDS 40.0%
!! TGTTGTTGGTGTTGACAATG+TGG - chr4_1:57560465-57560484 Msa0558610:CDS 40.0%
TCGTTAACAGATTCACCTTC+TGG - chr4_1:57560574-57560593 Msa0558610:intron 40.0%
GCCGGGTGATTATAAAAATG+TGG - chr4_1:57560837-57560856 Msa0558610:intron 40.0%
TTCTTGGACCTGAAGTAATG+CGG + chr4_1:57560913-57560932 None:intergenic 40.0%
TTCTTCAAGCTTGGTCCATA+AGG + chr4_1:57561054-57561073 None:intergenic 40.0%
TTATGGACCAAGCTTGAAGA+AGG - chr4_1:57561053-57561072 Msa0558610:intron 40.0%
TATGGACCAAGCTTGAAGAA+GGG - chr4_1:57561054-57561073 Msa0558610:intron 40.0%
TGAAGAAGGGGAACATTAAG+AGG - chr4_1:57561067-57561086 Msa0558610:intron 40.0%
CAAAGCAGAAAAACTCCTTG+TGG + chr4_1:57561149-57561168 None:intergenic 40.0%
TGCTTGGCAAGTGAAAGTAA+TGG - chr4_1:57561789-57561808 Msa0558610:CDS 40.0%
AAACAACAGGGCAAAAACTG+AGG + chr4_1:57561907-57561926 None:intergenic 40.0%
!!! AGTTTTTGCCCTGTTGTTTC+AGG - chr4_1:57561908-57561927 Msa0558610:intron 40.0%
CAAATAGGCCTGAAACAACA+GGG + chr4_1:57561919-57561938 None:intergenic 40.0%
ACAAATAGGCCTGAAACAAC+AGG + chr4_1:57561920-57561939 None:intergenic 40.0%
!! CTGTTTCTAGCTCAGTTTCT+CGG + chr4_1:57562028-57562047 None:intergenic 40.0%
GTAACGAACAAAAGCTGCTT+CGG + chr4_1:57562099-57562118 None:intergenic 40.0%
CTTCTATGAAGATCCAAGAC+AGG + chr4_1:57562305-57562324 None:intergenic 40.0%
! GATCAGAAGGACATTTGTTG+CGG - chr4_1:57562467-57562486 Msa0558610:intron 40.0%
TCATTACCATTTGTCCTCTG+GGG + chr4_1:57562518-57562537 None:intergenic 40.0%
!! AAAAGTATCATGCCCTCCTA+TGG - chr4_1:57562649-57562668 Msa0558610:intron 40.0%
!! AAAAGTATCATGCCCTCCTA+CGG - chr4_1:57562649-57562668 Msa0558610:intron 40.0%
!! AAAAGTATCATGCCCTCCTA+CGG - chr4_1:57562649-57562668 Msa0558610:intron 40.0%
!! AAAAGTATCATGCCCTCCTA+CGG - chr4_1:57562649-57562668 Msa0558610:intron 40.0%
!! AAAAGTATCATGCCCTCCTA+CGG - chr4_1:57562649-57562668 Msa0558610:intron 40.0%
ATCTCTCTGAGTAAAGTCGA+GGG + chr4_1:57563349-57563368 None:intergenic 40.0%
TTGAGCACTTTCAGAAACAC+TGG - chr4_1:57563566-57563585 Msa0558610:CDS 40.0%
TGAGCACTTTCAGAAACACT+GGG - chr4_1:57563567-57563586 Msa0558610:CDS 40.0%
TTTCAGAAACACTGGGGAAA+AGG - chr4_1:57563574-57563593 Msa0558610:CDS 40.0%
!! ATGTACTTTGGAGCACATCT+TGG + chr4_1:57563615-57563634 None:intergenic 40.0%
!!! GTGTGTTTTTTATTGGCAGG+TGG - chr4_1:57563966-57563985 Msa0558610:CDS 40.0%
GGCAGGTGGAAATAAACATT+AGG - chr4_1:57563980-57563999 Msa0558610:CDS 40.0%
CATGAGATGCTGAAACTGAA+GGG - chr4_1:57564051-57564070 Msa0558610:CDS 40.0%
GAATACATGAATCCTGTGTC+TGG - chr4_1:57564150-57564169 Msa0558610:CDS 40.0%
AAATTCAGAAGACCAGACAC+AGG + chr4_1:57564165-57564184 None:intergenic 40.0%
TTAGCTGCAAATTTGCCAGA+CGG - chr4_1:57564183-57564202 Msa0558610:CDS 40.0%
TATGGCCCAATGTCATGTTT+CGG + chr4_1:57564213-57564232 None:intergenic 40.0%
CTGTTGTGACTCATATGATG+TGG - chr4_1:57564287-57564306 Msa0558610:CDS 40.0%
CTCACCGTAGCAAATATCAA+AGG + chr4_1:57564451-57564470 None:intergenic 40.0%
AGACAAGCAAATACTCCATG+AGG + chr4_1:57564544-57564563 None:intergenic 40.0%
ACAATCGTAAGCGTATGAGA+CGG + chr4_1:57564672-57564691 None:intergenic 40.0%
CATTTCCTTTGTGCAATTCG+TGG - chr4_1:57564871-57564890 Msa0558610:CDS 40.0%
AATGACCACGAATTGCACAA+AGG + chr4_1:57564879-57564898 None:intergenic 40.0%
! GCACTGATCTATGAGAGTTA+GGG + chr4_1:57564985-57565004 None:intergenic 40.0%
!! AGCACTGATCTATGAGAGTT+AGG + chr4_1:57564986-57565005 None:intergenic 40.0%
CAAGTTGTTCTGTAGAGAGA+GGG + chr4_1:57565104-57565123 None:intergenic 40.0%
GCTGAAGAAACGGTACAAAA+AGG - chr4_1:57565231-57565250 Msa0558610:intron 40.0%
ATTCCTTCTTTCCCCATACT+CGG + chr4_1:57565261-57565280 None:intergenic 40.0%
!!! AGCTATTTTAGCTCCAGTTG+AGG + chr4_1:57565322-57565341 None:intergenic 40.0%
ATTCTGAACCCTCTCTTCAT+GGG - chr4_1:57565400-57565419 Msa0558610:intron 40.0%
ACTTCTAGGTGACAAATTGG+TGG + chr4_1:57565436-57565455 None:intergenic 40.0%
TAACAGTTAGAGCTTTCAGC+GGG + chr4_1:57565459-57565478 None:intergenic 40.0%
TACTCATGACTCTCACAAGA+AGG - chr4_1:57565587-57565606 Msa0558610:intron 40.0%
TCACAAAATGAGACTGAAGG+AGG - chr4_1:57565725-57565744 Msa0558610:CDS 40.0%
AAAGTCCATGGTTCAATCTC+TGG + chr4_1:57565841-57565860 None:intergenic 40.0%
! TACACTCGGCAACATTTTCA+GGG + chr4_1:57566164-57566183 None:intergenic 40.0%
! ATACACTCGGCAACATTTTC+AGG + chr4_1:57566165-57566184 None:intergenic 40.0%
GTCAATCAACTGGATACACT+CGG + chr4_1:57566178-57566197 None:intergenic 40.0%
AGCAAAAGTAGACAAGCTTG+AGG - chr4_1:57566227-57566246 Msa0558610:CDS 40.0%
AAGTGGGAGATAAGGTAAGA+AGG + chr4_1:57566508-57566527 None:intergenic 40.0%
!! CTCTGAAGCTTCAAAGACTC+TGG + chr4_1:57560406-57560425 None:intergenic 45.0%
TTCAATGTCTTCTTCCTCGC+AGG + chr4_1:57560607-57560626 None:intergenic 45.0%
TGGAGAGAGAAGTTGAGAAG+AGG - chr4_1:57560665-57560684 Msa0558610:CDS 45.0%
ATGGACCAAGCTTGAAGAAG+GGG - chr4_1:57561055-57561074 Msa0558610:intron 45.0%
ATGTTCCCCTTCTTCAAGCT+TGG + chr4_1:57561063-57561082 None:intergenic 45.0%
TGCAAGTCCGTTGACAAACT+GGG + chr4_1:57561758-57561777 None:intergenic 45.0%
! TCAACGGACTTGCACTTGTA+AGG - chr4_1:57561764-57561783 Msa0558610:CDS 45.0%
TTGCACTTGTAAGGTCTGCT+TGG - chr4_1:57561773-57561792 Msa0558610:CDS 45.0%
AGGACAGTGAAAGTAAGGTC+TGG - chr4_1:57561823-57561842 Msa0558610:intron 45.0%
TCACTGCAAAACACCTGTCT+TGG - chr4_1:57562289-57562308 Msa0558610:intron 45.0%
!! GCACCGTATTTTGGATCAGA+AGG - chr4_1:57562454-57562473 Msa0558610:intron 45.0%
CTACTTCAACATTGCCTGAG+AGG - chr4_1:57562606-57562625 Msa0558610:intron 45.0%
AAAAGGATCATGCCCTCCTA+TGG - chr4_1:57562754-57562773 Msa0558610:intron 45.0%
AAAAGGATCATGCCCTCCTA+CGG - chr4_1:57562754-57562773 Msa0558610:intron 45.0%
! GAGCTTGGTGAATCTAGTAC+AGG - chr4_1:57562983-57563002 Msa0558610:intron 45.0%
CATCTCTCTGAGTAAAGTCG+AGG + chr4_1:57563350-57563369 None:intergenic 45.0%
CTCGACTTTACTCAGAGAGA+TGG - chr4_1:57563348-57563367 Msa0558610:CDS 45.0%
CCACTGATGTCCAAAACTGT+AGG + chr4_1:57563538-57563557 None:intergenic 45.0%
!!! CCTACAGTTTTGGACATCAG+TGG - chr4_1:57563535-57563554 Msa0558610:CDS 45.0%
GAGCACTTTCAGAAACACTG+GGG - chr4_1:57563568-57563587 Msa0558610:CDS 45.0%
AGCACATCTTGGACCACTAT+AGG + chr4_1:57563604-57563623 None:intergenic 45.0%
! TGAACAGTGGATTCCAACTG+AGG + chr4_1:57563642-57563661 None:intergenic 45.0%
!! ATCCTGTTTGGATTGGTGTG+AGG - chr4_1:57563723-57563742 Msa0558610:CDS 45.0%
AACCTCACACCAATCCAAAC+AGG + chr4_1:57563728-57563747 None:intergenic 45.0%
TCATGCCAAGTGTTTCTCTG+AGG + chr4_1:57564036-57564055 None:intergenic 45.0%
GCATGAGATGCTGAAACTGA+AGG - chr4_1:57564050-57564069 Msa0558610:CDS 45.0%
AGATGCTGAAACTGAAGGGA+TGG - chr4_1:57564055-57564074 Msa0558610:CDS 45.0%
TAGCTGCAAATTTGCCAGAC+GGG - chr4_1:57564184-57564203 Msa0558610:CDS 45.0%
GGAGTCCGAAACATGACATT+GGG - chr4_1:57564205-57564224 Msa0558610:CDS 45.0%
AATCGTAAGCGTATGAGACG+GGG + chr4_1:57564670-57564689 None:intergenic 45.0%
CAATCGTAAGCGTATGAGAC+GGG + chr4_1:57564671-57564690 None:intergenic 45.0%
! TGTAACCAAGCATCGCCTAT+TGG - chr4_1:57564763-57564782 Msa0558610:intron 45.0%
TAGAACCAATAGGCGATGCT+TGG + chr4_1:57564771-57564790 None:intergenic 45.0%
TGACCCACACATCGAATTAC+AGG - chr4_1:57564947-57564966 Msa0558610:intron 45.0%
CCACCTGTAATTCGATGTGT+GGG + chr4_1:57564953-57564972 None:intergenic 45.0%
GCAAGTTGTTCTGTAGAGAG+AGG + chr4_1:57565105-57565124 None:intergenic 45.0%
GCACAAAGCTCTGTGTCAAA+TGG - chr4_1:57565149-57565168 Msa0558610:CDS 45.0%
CTACTGAGCTGTTACCTGAA+CGG - chr4_1:57565181-57565200 Msa0558610:intron 45.0%
TACTGAGCTGTTACCTGAAC+GGG - chr4_1:57565182-57565201 Msa0558610:intron 45.0%
TTACCTGAACGGGAAGTGAA+AGG - chr4_1:57565192-57565211 Msa0558610:intron 45.0%
TACCTGAACGGGAAGTGAAA+GGG - chr4_1:57565193-57565212 Msa0558610:intron 45.0%
TTACCGAGTATGGGGAAAGA+AGG - chr4_1:57565255-57565274 Msa0558610:intron 45.0%
ACATCTTGCATCTCCTCAAC+TGG - chr4_1:57565306-57565325 Msa0558610:intron 45.0%
ATATTTCCCAGGACGGAGAA+CGG - chr4_1:57565364-57565383 Msa0558610:intron 45.0%
GATTCTGAACCCTCTCTTCA+TGG - chr4_1:57565399-57565418 Msa0558610:intron 45.0%
! CTAGGTGACAAATTGGTGGT+AGG + chr4_1:57565432-57565451 None:intergenic 45.0%
GGGACTTCTAGGTGACAAAT+TGG + chr4_1:57565439-57565458 None:intergenic 45.0%
TCTTCGAAAGACATCCCACT+GGG + chr4_1:57565511-57565530 None:intergenic 45.0%
ACATGTTGCTGGAAAGTCCA+TGG + chr4_1:57565853-57565872 None:intergenic 45.0%
TGGACTTTCCAGCAACATGT+TGG - chr4_1:57565853-57565872 Msa0558610:intron 45.0%
ACACAAACTCCAATACCGCA+TGG + chr4_1:57566140-57566159 None:intergenic 45.0%
! ACACTCGGCAACATTTTCAG+GGG + chr4_1:57566163-57566182 None:intergenic 45.0%
GTGTATCCAGTTGATTGACG+AGG - chr4_1:57566179-57566198 Msa0558610:CDS 45.0%
AGTTGATTGACGAGGTCAGA+CGG - chr4_1:57566187-57566206 Msa0558610:CDS 45.0%
! GCATGCATGTTTAGTTTCGC+TGG + chr4_1:57566457-57566476 None:intergenic 45.0%
AAAATCTTCATCGGCGACCG+AGG - chr4_1:57560243-57560262 Msa0558610:three_prime_UTR 50.0%
CTGTAACGCCGCATTACTTC+AGG - chr4_1:57560902-57560921 Msa0558610:intron 50.0%
GTGCAAGTCCGTTGACAAAC+TGG + chr4_1:57561759-57561778 None:intergenic 50.0%
!! CGACAGTGAGCACCGTATTT+TGG - chr4_1:57562445-57562464 Msa0558610:intron 50.0%
CAACTTCAACATTGCCCCAG+AGG - chr4_1:57562501-57562520 Msa0558610:intron 50.0%
ACATTGCCCCAGAGGACAAA+TGG - chr4_1:57562509-57562528 Msa0558610:intron 50.0%
! CAAAGCATCATGCCGTCCTA+TGG - chr4_1:57562544-57562563 Msa0558610:intron 50.0%
ATCCACCAACCTCCATAGGA+CGG + chr4_1:57562559-57562578 None:intergenic 50.0%
TCACATCCACCAACCTCCAT+AGG + chr4_1:57562563-57562582 None:intergenic 50.0%
ATCCACCAAGCTCCATAGGA+GGG + chr4_1:57562664-57562683 None:intergenic 50.0%
! GAGCTTGATGGACGAGATAC+AGG - chr4_1:57562878-57562897 Msa0558610:intron 50.0%
ATTCACCAAGCTCCGTAGGA+GGG + chr4_1:57562976-57562995 None:intergenic 50.0%
CTAGATTCACCAAGCTCCGT+AGG + chr4_1:57562980-57562999 None:intergenic 50.0%
CTACTTCAACATTGCCCGAG+AGG - chr4_1:57562918-57562937 Msa0558610:intron 50.0%
CTACTTCAACATTGCCCGAG+AGG - chr4_1:57562918-57562937 Msa0558610:intron 50.0%
TTGCAGAAAGCAGCTGAGAG+AGG - chr4_1:57563484-57563503 Msa0558610:CDS 50.0%
CATCTTGGACCACTATAGGC+TGG + chr4_1:57563600-57563619 None:intergenic 50.0%
GTTCGATGGCAACCCTAGTA+TGG + chr4_1:57563929-57563948 None:intergenic 50.0%
AGGACGACATTTGAGAGACC+CGG + chr4_1:57564016-57564035 None:intergenic 50.0%
GTCGTCCTCAGAGAAACACT+TGG - chr4_1:57564028-57564047 Msa0558610:CDS 50.0%
GGGAGTCCGAAACATGACAT+TGG - chr4_1:57564204-57564223 Msa0558610:CDS 50.0%
CCCACACATCGAATTACAGG+TGG - chr4_1:57564950-57564969 Msa0558610:intron 50.0%
GCCACCTGTAATTCGATGTG+TGG + chr4_1:57564954-57564973 None:intergenic 50.0%
ATCCCTTTCACTTCCCGTTC+AGG + chr4_1:57565198-57565217 None:intergenic 50.0%
TGAACGGGAAGTGAAAGGGA+TGG - chr4_1:57565197-57565216 Msa0558610:intron 50.0%
GATATTCCGTTCTCCGTCCT+GGG + chr4_1:57565373-57565392 None:intergenic 50.0%
GGAACAGTCCCATGAAGAGA+GGG + chr4_1:57565411-57565430 None:intergenic 50.0%
AGGAACAGTCCCATGAAGAG+AGG + chr4_1:57565412-57565431 None:intergenic 50.0%
GTCTTCGAAAGACATCCCAC+TGG + chr4_1:57565512-57565531 None:intergenic 50.0%
CAGCTTCTCCAACATGTTGC+TGG + chr4_1:57565864-57565883 None:intergenic 50.0%
GAAGCTGTCATCATTCCTGC+TGG - chr4_1:57565877-57565896 Msa0558610:intron 50.0%
CTGGTTGTCCGTACCAGATA+AGG - chr4_1:57565896-57565915 Msa0558610:intron 50.0%
TCTGCAGTGTTGTGTCCATG+CGG - chr4_1:57566122-57566141 Msa0558610:CDS 50.0%
GTGTTGTGTCCATGCGGTAT+TGG - chr4_1:57566128-57566147 Msa0558610:CDS 50.0%
GTCTGACCTCGTCAATCAAC+TGG + chr4_1:57566188-57566207 None:intergenic 50.0%
TTCGTCCGGTAGAAGCTCCT+CGG + chr4_1:57560263-57560282 None:intergenic 55.0%
AGCTTCTACCGGACGAACTC+CGG - chr4_1:57560266-57560285 Msa0558610:three_prime_UTR 55.0%
GAAGAACCGACGGGAAGCAA+TGG - chr4_1:57560293-57560312 Msa0558610:three_prime_UTR 55.0%
CTCGCAGGAACAGAACCAGA+AGG + chr4_1:57560592-57560611 None:intergenic 55.0%
!! CTTCTGGTTCTGTTCCTGCG+AGG - chr4_1:57560590-57560609 Msa0558610:intron 55.0%
GATATCACCAGCTTCGACGC+CGG - chr4_1:57560819-57560838 Msa0558610:intron 55.0%
ATATCACCAGCTTCGACGCC+GGG - chr4_1:57560820-57560839 Msa0558610:intron 55.0%
GGTTGCTCTTGGGAAGTTGC+AGG - chr4_1:57560942-57560961 Msa0558610:intron 55.0%
TGCTCTTGGGAAGTTGCAGG+TGG - chr4_1:57560945-57560964 Msa0558610:intron 55.0%
CCTTGTGGCAACTCGAACAC+TGG + chr4_1:57561134-57561153 None:intergenic 55.0%
!! CCAGTGTTCGAGTTGCCACA+AGG - chr4_1:57561131-57561150 Msa0558610:intron 55.0%
AGGCGTGCCCAGTTTGTCAA+CGG - chr4_1:57561748-57561767 Msa0558610:CDS 55.0%
AGCATCATGCCGTCCTATGG+AGG - chr4_1:57562547-57562566 Msa0558610:intron 55.0%
TCATGCCGTCCTATGGAGGT+TGG - chr4_1:57562551-57562570 Msa0558610:intron 55.0%
!! GAGGTTGGTGGATGTGACAC+AGG - chr4_1:57562566-57562585 Msa0558610:intron 55.0%
TCATGCCCTCCTATGGAGCT+TGG - chr4_1:57562656-57562675 Msa0558610:intron 55.0%
CATCCACCAAGCTCCATAGG+AGG + chr4_1:57562665-57562684 None:intergenic 55.0%
CCACATCCACCAAGCTCCAT+AGG + chr4_1:57562668-57562687 None:intergenic 55.0%
! CCTATGGAGCTTGGTGGATG+TGG - chr4_1:57562665-57562684 Msa0558610:intron 55.0%
! GAGCTTGGTGGATGTGGTAC+AGG - chr4_1:57562671-57562690 Msa0558610:intron 55.0%
TCATGCCCTCCTATGGAGCT+TGG - chr4_1:57562656-57562675 Msa0558610:intron 55.0%
GTCCACCAAGCTCCATAGGA+GGG + chr4_1:57562769-57562788 None:intergenic 55.0%
TCTCGTCCACCAAGCTCCAT+AGG + chr4_1:57562773-57562792 None:intergenic 55.0%
! GAGCTTGGTGGACGAGATAC+AGG - chr4_1:57562776-57562795 Msa0558610:intron 55.0%
CTACTACTTCGTTGCCCGAG+AGG - chr4_1:57562813-57562832 Msa0558610:intron 55.0%
GTCCATCAAGCTCCGTAGGA+GGG + chr4_1:57562871-57562890 None:intergenic 55.0%
TCTCGTCCATCAAGCTCCGT+AGG + chr4_1:57562875-57562894 None:intergenic 55.0%
GATTCACCAAGCTCCGTAGG+AGG + chr4_1:57562977-57562996 None:intergenic 55.0%
ATCCACCAAGCTCCGTAGGA+GGG + chr4_1:57563291-57563310 None:intergenic 55.0%
! GAGCTTGGTGGATGTGGTAC+AGG - chr4_1:57562671-57562690 Msa0558610:intron 55.0%
GGGAAAAGGCCAGCCTATAG+TGG - chr4_1:57563588-57563607 Msa0558610:CDS 55.0%
TCATGTTTCGGACTCCCGTC+TGG + chr4_1:57564201-57564220 None:intergenic 55.0%
GATGTGTGGGTCACTGACAC+AGG + chr4_1:57564940-57564959 None:intergenic 55.0%
CGATATTCCGTTCTCCGTCC+TGG + chr4_1:57565374-57565393 None:intergenic 55.0%
GAGCTTTCAGCGGGACTTCT+AGG + chr4_1:57565450-57565469 None:intergenic 55.0%
TGAGCATTCAGGTGCCCAGT+GGG - chr4_1:57565494-57565513 Msa0558610:intron 55.0%
ATCTGGTACGGACAACCAGC+AGG + chr4_1:57565895-57565914 None:intergenic 55.0%
GAACCGACGGGAAGCAATGG+CGG - chr4_1:57560296-57560315 Msa0558610:three_prime_UTR 60.0%
GGAAGCAATGGCGGTGCAAG+AGG - chr4_1:57560305-57560324 Msa0558610:three_prime_UTR 60.0%
GCGGTGCAAGAGGAGAGTGA+TGG - chr4_1:57560315-57560334 Msa0558610:three_prime_UTR 60.0%
! TAATCACCCGGCGTCGAAGC+TGG + chr4_1:57560829-57560848 None:intergenic 60.0%
TGCCGTCCTATGGAGGTTGG+TGG - chr4_1:57562554-57562573 Msa0558610:intron 60.0%
TGCCCTCCTATGGAGCTTGG+TGG - chr4_1:57562659-57562678 Msa0558610:intron 60.0%
TGCCCTCCTATGGAGCTTGG+TGG - chr4_1:57562659-57562678 Msa0558610:intron 60.0%
CGTCCACCAAGCTCCATAGG+AGG + chr4_1:57562770-57562789 None:intergenic 60.0%
TGCCCTCCTACGGAGCTTGA+TGG - chr4_1:57562866-57562885 Msa0558610:intron 60.0%
CGTCCATCAAGCTCCGTAGG+AGG + chr4_1:57562872-57562891 None:intergenic 60.0%
TCATGCCCTCCTACGGAGCT+TGG - chr4_1:57562863-57562882 Msa0558610:intron 60.0%
TCATGCCCTCCTACGGAGCT+TGG - chr4_1:57562863-57562882 Msa0558610:intron 60.0%
GTCCACCAAGCTCCGTAGGA+GGG + chr4_1:57563081-57563100 None:intergenic 60.0%
! CTCCTACGGAGCTTGGTGGA+CGG - chr4_1:57563080-57563099 Msa0558610:intron 60.0%
! TCCTACGGAGCTTGGTGGAC+GGG - chr4_1:57563081-57563100 Msa0558610:intron 60.0%
TCATGCCCTCCTACGGAGCT+TGG - chr4_1:57562863-57562882 Msa0558610:intron 60.0%
GTCCACCAAGCTCCGTAGGA+GGG + chr4_1:57563081-57563100 None:intergenic 60.0%
TCTCGTCCACCAAGCTCCGT+AGG + chr4_1:57563190-57563209 None:intergenic 60.0%
CTACTTCAACGTCGCCCGAG+AGG - chr4_1:57563233-57563252 Msa0558610:CDS 60.0%
TCATGCCCTCCTACGGAGCT+TGG - chr4_1:57562863-57562882 Msa0558610:intron 60.0%
CATCCACCAAGCTCCGTAGG+AGG + chr4_1:57563292-57563311 None:intergenic 60.0%
CCACATCCACCAAGCTCCGT+AGG + chr4_1:57563295-57563314 None:intergenic 60.0%
! CCTACGGAGCTTGGTGGATG+TGG - chr4_1:57563292-57563311 Msa0558610:CDS 60.0%
CTGAGCATTCAGGTGCCCAG+TGG - chr4_1:57565493-57565512 Msa0558610:intron 60.0%
GGCGACCGAGGAGCTTCTAC+CGG - chr4_1:57560255-57560274 Msa0558610:three_prime_UTR 65.0%
CTACCGGACGAACTCCGGTG+CGG - chr4_1:57560271-57560290 Msa0558610:three_prime_UTR 65.0%
CTTCCGCACCGGAGTTCGTC+CGG + chr4_1:57560277-57560296 None:intergenic 65.0%
CTCCGGTGCGGAAGAACCGA+CGG - chr4_1:57560283-57560302 Msa0558610:three_prime_UTR 65.0%
TCCGGTGCGGAAGAACCGAC+GGG - chr4_1:57560284-57560303 Msa0558610:three_prime_UTR 65.0%
!! TCCCGTCGGTTCTTCCGCAC+CGG + chr4_1:57560288-57560307 None:intergenic 65.0%
GCACCGCCATTGCTTCCCGT+CGG + chr4_1:57560302-57560321 None:intergenic 65.0%
TGCCCTCCTACGGAGCTTGG+TGG - chr4_1:57562971-57562990 Msa0558610:intron 65.0%
CGTCCACCAAGCTCCGTAGG+AGG + chr4_1:57563082-57563101 None:intergenic 65.0%
TCCCGTCCACCAAGCTCCGT+AGG + chr4_1:57563085-57563104 None:intergenic 65.0%
TGCCCTCCTACGGAGCTTGG+TGG - chr4_1:57562971-57562990 Msa0558610:intron 65.0%
CGTCCACCAAGCTCCGTAGG+AGG + chr4_1:57563082-57563101 None:intergenic 65.0%
TGCCCTCCTACGGAGCTTGG+TGG - chr4_1:57562971-57562990 Msa0558610:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 57560132 57566762 57560132 ID=Msa0558610;Name=Msa0558610
chr4_1 mRNA 57560132 57566762 57560132 ID=Msa0558610-mRNA-1;Parent=Msa0558610;Name=Msa0558610-mRNA-1;_AED=0.13;_eAED=0.13;_QI=103|0.8|0.81|1|1|1|11|314|1185
chr4_1 exon 57560132 57560517 57560132 ID=Msa0558610-mRNA-1:exon:17425;Parent=Msa0558610-mRNA-1
chr4_1 exon 57560646 57560765 57560646 ID=Msa0558610-mRNA-1:exon:17424;Parent=Msa0558610-mRNA-1
chr4_1 exon 57560967 57561052 57560967 ID=Msa0558610-mRNA-1:exon:17423;Parent=Msa0558610-mRNA-1
chr4_1 exon 57561141 57561213 57561141 ID=Msa0558610-mRNA-1:exon:17422;Parent=Msa0558610-mRNA-1
chr4_1 exon 57561262 57561822 57561262 ID=Msa0558610-mRNA-1:exon:17421;Parent=Msa0558610-mRNA-1
chr4_1 exon 57563150 57564608 57563150 ID=Msa0558610-mRNA-1:exon:17420;Parent=Msa0558610-mRNA-1
chr4_1 exon 57564680 57564743 57564680 ID=Msa0558610-mRNA-1:exon:17419;Parent=Msa0558610-mRNA-1
chr4_1 exon 57564832 57564964 57564832 ID=Msa0558610-mRNA-1:exon:17418;Parent=Msa0558610-mRNA-1
chr4_1 exon 57565055 57565175 57565055 ID=Msa0558610-mRNA-1:exon:17417;Parent=Msa0558610-mRNA-1
chr4_1 exon 57565710 57565849 57565710 ID=Msa0558610-mRNA-1:exon:17416;Parent=Msa0558610-mRNA-1
chr4_1 exon 57565931 57566762 57565931 ID=Msa0558610-mRNA-1:exon:17415;Parent=Msa0558610-mRNA-1
chr4_1 five_prime_UTR 57566660 57566762 57566660 ID=Msa0558610-mRNA-1:five_prime_utr;Parent=Msa0558610-mRNA-1
chr4_1 CDS 57565931 57566659 57565931 ID=Msa0558610-mRNA-1:cds;Parent=Msa0558610-mRNA-1
chr4_1 CDS 57565710 57565849 57565710 ID=Msa0558610-mRNA-1:cds;Parent=Msa0558610-mRNA-1
chr4_1 CDS 57565055 57565175 57565055 ID=Msa0558610-mRNA-1:cds;Parent=Msa0558610-mRNA-1
chr4_1 CDS 57564832 57564964 57564832 ID=Msa0558610-mRNA-1:cds;Parent=Msa0558610-mRNA-1
chr4_1 CDS 57564680 57564743 57564680 ID=Msa0558610-mRNA-1:cds;Parent=Msa0558610-mRNA-1
chr4_1 CDS 57563150 57564608 57563150 ID=Msa0558610-mRNA-1:cds;Parent=Msa0558610-mRNA-1
chr4_1 CDS 57561262 57561822 57561262 ID=Msa0558610-mRNA-1:cds;Parent=Msa0558610-mRNA-1
chr4_1 CDS 57561141 57561213 57561141 ID=Msa0558610-mRNA-1:cds;Parent=Msa0558610-mRNA-1
chr4_1 CDS 57560967 57561052 57560967 ID=Msa0558610-mRNA-1:cds;Parent=Msa0558610-mRNA-1
chr4_1 CDS 57560646 57560765 57560646 ID=Msa0558610-mRNA-1:cds;Parent=Msa0558610-mRNA-1
chr4_1 CDS 57560446 57560517 57560446 ID=Msa0558610-mRNA-1:cds;Parent=Msa0558610-mRNA-1
chr4_1 three_prime_UTR 57560132 57560445 57560132 ID=Msa0558610-mRNA-1:three_prime_utr;Parent=Msa0558610-mRNA-1
Gene Sequence

>Msa0558610

ATGGCGAGAAAATCTTCATCGGCGACCGAGGAGCTTCTACCGGACGAACTCCGGTGCGGAAGAACCGACGGGAAGCAATGGCGGTGCAAGAGGAGAGTGATGGATAATCTGAAACTGTGTGAGATTCATTATCTTCAAGGGAAGCATCGTCAATATAGAGAAAAGGTACCAGAGTCTTTGAAGCTTCAGAGAAAGCGTAAGAACAAGGAAGAAGAACAGGAACAAGAAACTGTTGTTGGTGTTGACAATGTGGAAGAAACAGTTAGGGTAGAAAAAGAGTTCAAAATGGAGCTGAGAAAAACTAAGAAGAAGAAAGTGAAGCTTGCAGAGAGTTCTGAATCGTTAACAGATTCACCTTCTGGTTCTGTTCCTGCGAGGAAGAAGACATTGAAGCAATGTGATACACAATTGGATCTTATAAGAATGGTTTTGGAGAGAGAAGTTGAGAAGAGGAAAAGAAACAATACCAATAAGAAGAAGAATAAGAAAAAGAAGATGAAGAAAAAGGTAATTAAAGAAGAAGTGGAATTGCATGATTTTAAAGAAGGTGAGTTGAGGAGAGAATTACCAAATGGAGTAATGGAGATATCACCAGCTTCGACGCCGGGTGATTATAAAAATGTGGGGACTCATTGTGATGTGAAAGTTGGTGATCATAAGATTGTAGCTGTAACGCCGCATTACTTCAGGTCCAAGAATATTGATAGGGTTGCTCTTGGGAAGTTGCAGGTTGTGCCTTATGGACCAAGCTTGAAGAAGGGGAACATTAAGAGGAAGTGTCACTCATGCCAGAGAAGTGATTCTTTAAATCTTGTCCAGTGTTCGAGTTGCCACAAGGAGTTTTTCTGCTTTGATTGTATAAGAGATCGGTATCTTGACACTAGAAAAGAAGTTAAGAAGGCGTGCCCAGTTTGTCAACGGACTTGCACTTGTAAGGTCTGCTTGGCAAGTGAAAGTAATGGCAGTGAAAGTAAGGACAGTGAAAGTAAGGCCTATTTGTCTAGCAAAAGTAGAGTTGATAGAATACTCCATTTTCATTATTTGATTTGCATGCTCCTTCCATTACTAAAGCGAATAAGTGAAAACCGAGAAACTGAGCTAGAAACAGAAGCAAAAATTAAAGGGAAAAGTATTTCTGATATTCAAATCAAGCAGGTTAAATTTGGTTACAGTGAAAATATTTGCTGCAATCACTGCAAAACACCTGTCTTGGATCTTCATAGAAGCTGTGATAGTTGTTCATATAGCCTATGCTTAAGATGTTGTGAGAAATTATGTCAAGGAAGAACTTCTGGAGAAATTAACTCATCTTTCTTGAAGCTACGTGATCAAATGAAAGCTTGTGTCGACAGTGAGCACCGTATTTTGGATCAGAAGGACATTTGTTGCGGCAATTTAACTGCAACTTCAACATTGCCCCAGAGGACAAATGGTAATGATATTGACAAAGCATCATGCCGTCCTATGGAGGTTGGTGGATGTGACACAGGCCTATTTGATTTAACTGCTACTTCAACATTGCCTGAGCGTACAAATTGTAATGATATTCAAAAAGTATCATGCCCTCCTATGGAGCTTGGTGGATGTGGTACAGGCCTGCTTGATTTAACTACTACTTCAACATTGCCTGAGAGGACAAATTGTAATGACAGCGAAAAAGGATCATGCCCTCCTATGGAGCTTGGTGGACGAGATACAGGTCTGCTTGATTTAACTACTACTTCGTTGCCCGAGAGGACAAATTGTAATGACAGCGAAAAAGGATCATGCCCTCCTACGGAGCTTGATGGACGAGATACAGGTCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGATGACCAATTTTAGTGAGAGCGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGAATCTAGTACAGGTCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGAGGACAAATTGTAATGATATTGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGACGGGATACAGACCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGAGGACAAATTGTAATGATATCGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGACGAGATACAGACATGCTTGATTTAACTGCTACTTCAACGTCGCCCGAGAGGACAAATTGTAATGACATTGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGATGTGGTACAGGCCTTCTTGATTTATTATGCATTTTTCCCTCGACTTTACTCAGAGAGATGGAAGTAAAAGCAGAAGAAATTGTTTGTAGCTATGACTTTCCTGAAACTTCGGATAAAAGTTCAAGCTGCTCACTGTGTTTTGACACCGACCTTAATACTGATCGATATAATCAGTTGCAGAAAGCAGCTGAGAGAGGAGATTCATCAGATAATTGCTTGTTTTGTCCTACAGTTTTGGACATCAGTGGTGATAACTTTGAGCACTTTCAGAAACACTGGGGAAAAGGCCAGCCTATAGTGGTCCAAGATGTGCTCCAAAGTACATCAAACCTCAGTTGGAATCCACTGTTCATGTTCTGTACTTATCTTGAGCAGAGCATTACAAAGTATGAGAATAATAAAGAGTTACTTGAATCCTGTTTGGATTGGTGTGAGGTTAATATTATGACACATTCTGCGGATGTCCCTCTCTCTACAGAACAACTTGCAAAAATAAGGAAATTGTTGAAGAAGCACAAAGCTCTGTGTCAAATGGAGTCTGTTGCTACTGAGCTGTTACCTGAACGGGAAGTGAAAGGGATGGCATTATCACATGCTGAAGAAACGGTACAAAAAGGTTTACCGAGTATGGGGAAAGAAGGAATCGAGTTTTTCAGGAGAGTCGATAGAACATCTTGCATCTCCTCAACTGGAGCTAAAATAGCTTCTACTCAGAGCATATACAACAATATTTCCCAGGACGGAGAACGGAATATCGTTTCTGATTCTGAACCCTCTCTTCATGGGACTGTTCCTACCACCAATTTGTCACCTAGAAGTCCCGCTGAAAGCTCTAACTGTTATAAGAAAAAGTTCACTGAGCATTCAGGTGCCCAGTGGGATGTCTTTCGAAGACAAGATGTGCCAAAGCTCGTAGAATACATTAAAAGACACTACGATGAACTTACTAATACTCATGACTCTCACAAGAAGGCAAGTTCAATGTTAGACAATTCCATGGTTCATCCAATTCTAGATCAGAGCATTTTTCTTGACCATATTCACAAAATGAGACTGAAGGAGGAGTTTAAGATTGAACCATGGACTTTCCAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCTGGTTGTCCGTACCAGATAAGGAATTCTAAGTGTTGTGTCCATGCGGTATTGGAGTTTGTGTCCCCTGAAAATGTTGCCGAGTGTATCCAGTTGATTGACGAGGTCAGACGGTTACCTGAAGACCATAAAGCAAAAGTAGACAAGCTTGAGGTGAAGAAAATGGCGCTACATAGCATGAGTGCAGCAATTGACGAAATACGCCAGCTTACATGCAAAACATGA
Protein sequence

>Msa0558610

MARKSSSATEELLPDELRCGRTDGKQWRCKRRVMDNLKLCEIHYLQGKHRQYREKVPESLKLQRKRKNKEEEQEQETVVGVDNVEETVRVEKEFKMELRKTKKKKVKLAESSESLTDSPSGSVPARKKTLKQCDTQLDLIRMVLEREVEKRKRNNTNKKKNKKKKMKKKVIKEEVELHDFKEGELRRELPNGVMEISPASTPGDYKNVGTHCDVKVGDHKIVAVTPHYFRSKNIDRVALGKLQVVPYGPSLKKGNIKRKCHSCQRSDSLNLVQCSSCHKEFFCFDCIRDRYLDTRKEVKKACPVCQRTCTCKVCLASESNGSESKDSESKAYLSSKSRVDRILHFHYLICMLLPLLKRISENRETELETEAKIKGKSISDIQIKQVKFGYSENICCNHCKTPVLDLHRSCDSCSYSLCLRCCEKLCQGRTSGEINSSFLKLRDQMKACVDSEHRILDQKDICCGNLTATSTLPQRTNGNDIDKASCRPMEVGGCDTGLFDLTATSTLPERTNCNDIQKVSCPPMELGGCGTGLLDLTTTSTLPERTNCNDSEKGSCPPMELGGRDTGLLDLTTTSLPERTNCNDSEKGSCPPTELDGRDTGLLDLTATSTLPEMTNFSESEKVSCPPTELGESSTGLLDLTATSTLPERTNCNDIEKVSCPPTELGGRDTDLLDLTATSTLPERTNCNDIEKVSCPPTELGGRDTDMLDLTATSTSPERTNCNDIEKVSCPPTELGGCGTGLLDLLCIFPSTLLREMEVKAEEIVCSYDFPETSDKSSSCSLCFDTDLNTDRYNQLQKAAERGDSSDNCLFCPTVLDISGDNFEHFQKHWGKGQPIVVQDVLQSTSNLSWNPLFMFCTYLEQSITKYENNKELLESCLDWCEVNIMTHSADVPLSTEQLAKIRKLLKKHKALCQMESVATELLPEREVKGMALSHAEETVQKGLPSMGKEGIEFFRRVDRTSCISSTGAKIASTQSIYNNISQDGERNIVSDSEPSLHGTVPTTNLSPRSPAESSNCYKKKFTEHSGAQWDVFRRQDVPKLVEYIKRHYDELTNTHDSHKKASSMLDNSMVHPILDQSIFLDHIHKMRLKEEFKIEPWTFQQHVGEAVIIPAGCPYQIRNSKCCVHAVLEFVSPENVAECIQLIDEVRRLPEDHKAKVDKLEVKKMALHSMSAAIDEIRQLTCKT*