Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560360 | XP_013457187.1 | 97.959 | 1029 | 21 | 0 | 1 | 1029 | 1 | 1029 | 0.0 | 2107 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560360 | sp|Q6NPP4|CMTA2_ARATH | 50.047 | 1065 | 441 | 21 | 1 | 1010 | 1 | 1029 | 0.0 | 978 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560360 | A0A072UQ84 | 97.959 | 1029 | 21 | 0 | 1 | 1029 | 1 | 1029 | 0.0 | 2107 |
Gene ID | Type | Classification |
---|---|---|
Msa0560360 | TF | CAMTA |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560360 | MtrunA17_Chr4g0050401 | 97.959 | 1029 | 21 | 0 | 1 | 1029 | 1 | 1029 | 0.0 | 2107 |
Msa0560360 | MtrunA17_Chr2g0279141 | 62.673 | 1085 | 304 | 14 | 1 | 1029 | 1 | 1040 | 0.0 | 1310 |
Msa0560360 | MtrunA17_Chr8g0382191 | 40.302 | 1124 | 515 | 28 | 12 | 1027 | 8 | 1083 | 0.0 | 700 |
Msa0560360 | MtrunA17_Chr8g0377501 | 38.486 | 621 | 310 | 17 | 426 | 1023 | 396 | 967 | 1.29e-118 | 387 |
Msa0560360 | MtrunA17_Chr8g0377501 | 50.641 | 156 | 70 | 1 | 14 | 169 | 15 | 163 | 9.06e-43 | 169 |
Msa0560360 | MtrunA17_Chr3g0122351 | 39.085 | 568 | 306 | 12 | 426 | 984 | 375 | 911 | 1.25e-99 | 336 |
Msa0560360 | MtrunA17_Chr3g0122351 | 47.445 | 137 | 72 | 0 | 10 | 146 | 4 | 140 | 6.46e-37 | 150 |
Msa0560360 | MtrunA17_Chr2g0294711 | 32.268 | 626 | 355 | 16 | 384 | 981 | 302 | 886 | 1.08e-81 | 285 |
Msa0560360 | MtrunA17_Chr2g0294711 | 55.645 | 124 | 55 | 0 | 13 | 136 | 25 | 148 | 1.85e-37 | 152 |
Msa0560360 | MtrunA17_Chr4g0068161 | 32.468 | 616 | 362 | 15 | 386 | 981 | 316 | 897 | 2.40e-78 | 276 |
Msa0560360 | MtrunA17_Chr4g0068161 | 54.839 | 124 | 56 | 0 | 13 | 136 | 25 | 148 | 1.27e-30 | 130 |
Msa0560360 | MtrunA17_Chr8g0382181 | 31.496 | 508 | 283 | 12 | 55 | 537 | 8 | 475 | 4.24e-67 | 233 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560360 | AT5G64220.1 | 50.047 | 1065 | 441 | 21 | 1 | 1010 | 1 | 1029 | 0.0 | 978 |
Msa0560360 | AT5G64220.2 | 50.047 | 1065 | 441 | 21 | 1 | 1010 | 1 | 1029 | 0.0 | 978 |
Msa0560360 | AT5G09410.2 | 51.338 | 1046 | 420 | 26 | 11 | 1024 | 14 | 1002 | 0.0 | 970 |
Msa0560360 | AT5G09410.1 | 50.478 | 1046 | 411 | 26 | 11 | 1024 | 14 | 984 | 0.0 | 948 |
Msa0560360 | AT5G09410.4 | 49.093 | 937 | 388 | 26 | 120 | 1024 | 2 | 881 | 0.0 | 799 |
Msa0560360 | AT2G22300.2 | 43.147 | 1036 | 476 | 26 | 13 | 993 | 13 | 990 | 0.0 | 744 |
Msa0560360 | AT2G22300.1 | 43.147 | 1036 | 476 | 26 | 13 | 993 | 13 | 990 | 0.0 | 744 |
Msa0560360 | AT5G09410.3 | 57.534 | 657 | 259 | 13 | 382 | 1024 | 411 | 1061 | 0.0 | 732 |
Msa0560360 | AT5G09410.3 | 52.778 | 216 | 54 | 4 | 11 | 195 | 73 | 271 | 5.08e-57 | 214 |
Msa0560360 | AT2G22300.3 | 42.121 | 990 | 460 | 26 | 59 | 993 | 1 | 932 | 0.0 | 682 |
Msa0560360 | AT1G67310.1 | 38.358 | 597 | 334 | 12 | 429 | 1015 | 436 | 1008 | 1.48e-101 | 343 |
Msa0560360 | AT1G67310.1 | 48.000 | 125 | 65 | 0 | 11 | 135 | 34 | 158 | 2.30e-35 | 146 |
Msa0560360 | AT3G16940.3 | 31.655 | 556 | 342 | 10 | 436 | 981 | 274 | 801 | 8.63e-74 | 261 |
Msa0560360 | AT3G16940.3 | 53.906 | 128 | 59 | 0 | 21 | 148 | 4 | 131 | 6.91e-36 | 147 |
Msa0560360 | AT3G16940.1 | 31.655 | 556 | 342 | 10 | 436 | 981 | 301 | 828 | 1.50e-73 | 261 |
Msa0560360 | AT3G16940.1 | 52.206 | 136 | 65 | 0 | 13 | 148 | 23 | 158 | 1.14e-36 | 150 |
Msa0560360 | AT3G16940.2 | 30.065 | 459 | 291 | 9 | 436 | 884 | 301 | 739 | 2.40e-48 | 185 |
Msa0560360 | AT3G16940.2 | 52.206 | 136 | 65 | 0 | 13 | 148 | 23 | 158 | 6.52e-37 | 150 |
Find 278 sgRNAs with CRISPR-Local
Find 613 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAACCTGAAATTCCTTTC+TGG | 0.183571 | 4_1:+59657087 | None:intergenic |
ACCATACAGGTGTTGATTAT+TGG | 0.185292 | 4_1:-59658337 | Msa0560360:intron |
CCATGGACTTAACCCTTAAA+AGG | 0.206382 | 4_1:+59656180 | None:intergenic |
CTGTATTGGGCCCGAGCTTC+TGG | 0.238171 | 4_1:+59656149 | None:intergenic |
TGATGCACAGACTGCTCTTT+TGG | 0.240015 | 4_1:+59658962 | None:intergenic |
GTCTCCATGGGTGCAGCTGC+TGG | 0.249458 | 4_1:-59657179 | Msa0560360:CDS |
GATTGAGTAAAGCTCCATTT+TGG | 0.259181 | 4_1:+59659097 | None:intergenic |
ATTTCCAGAGGCGAAGTTAT+TGG | 0.262144 | 4_1:-59662231 | Msa0560360:CDS |
AGGTTGACAGCTTCTCTAAA+TGG | 0.265479 | 4_1:-59658889 | Msa0560360:CDS |
GGAAGGCTGGTTGGTTGGTC+GGG | 0.268021 | 4_1:+59656272 | None:intergenic |
AATAGGTCAGGATCAATTTC+TGG | 0.268880 | 4_1:+59659001 | None:intergenic |
TTGCTGCTCTTGGTTATGAT+TGG | 0.275206 | 4_1:-59657751 | Msa0560360:CDS |
TTATGTGAAGATGCTGATTC+AGG | 0.276888 | 4_1:-59660631 | Msa0560360:intron |
GAAGAGGATGATGAGGAGTT+TGG | 0.278551 | 4_1:-59656801 | Msa0560360:CDS |
TAACATGCGTTCTAGAAATA+TGG | 0.288900 | 4_1:-59660686 | Msa0560360:CDS |
ATGACATAGAACTGCCCTTT+TGG | 0.289844 | 4_1:+59660731 | None:intergenic |
GAATCAGCATAAGCCCATTT+AGG | 0.291998 | 4_1:+59658716 | None:intergenic |
GATGGCACAAAAGAAACTTT+AGG | 0.301408 | 4_1:-59657005 | Msa0560360:CDS |
CCTAATCGAAGAGCCATTTC+AGG | 0.311451 | 4_1:+59664389 | None:intergenic |
ATGCGGGCGGATTTCCAAAA+TGG | 0.320508 | 4_1:-59659111 | Msa0560360:CDS |
TCCGTCTGTGGACCATTTCC+CGG | 0.320563 | 4_1:+59660367 | None:intergenic |
GATGGCCAGAAAGGAATTTC+AGG | 0.321998 | 4_1:-59657092 | Msa0560360:CDS |
CAGAGGTGACAATGTGTAAT+TGG | 0.322993 | 4_1:-59658294 | Msa0560360:CDS |
TTCCGCTGAACTACTGGGTT+TGG | 0.324534 | 4_1:-59659047 | Msa0560360:CDS |
AGCTGATGGTGTGGAGGATT+TGG | 0.325559 | 4_1:-59655957 | Msa0560360:CDS |
CACAGTCTCTGCAATCAAAT+TGG | 0.329502 | 4_1:-59659960 | Msa0560360:CDS |
AAATTACCTCCCACTTGTTC+AGG | 0.329825 | 4_1:-59660142 | Msa0560360:CDS |
ATTTGCTTGCAGTGAAGTTC+AGG | 0.334277 | 4_1:-59658152 | Msa0560360:CDS |
CCTGAAATGGCTCTTCGATT+AGG | 0.336308 | 4_1:-59664389 | Msa0560360:intron |
TAACCCTTAAAAGGGCCTTT+TGG | 0.340909 | 4_1:+59656189 | None:intergenic |
ACCCTCCCCATGTCCAGATT+TGG | 0.343404 | 4_1:+59656734 | None:intergenic |
TAACTATTCCGCTGAACTAC+TGG | 0.345530 | 4_1:-59659053 | Msa0560360:CDS |
CTTCACAAAGTAACTGAAAC+TGG | 0.348831 | 4_1:-59657824 | Msa0560360:CDS |
AAGACAGACATTGAACTTGA+TGG | 0.351590 | 4_1:+59660000 | None:intergenic |
TGCTGCTCTTGGTTATGATT+GGG | 0.363320 | 4_1:-59657750 | Msa0560360:CDS |
TCGATCAGATGCCATTAATA+AGG | 0.366625 | 4_1:-59656297 | Msa0560360:CDS |
TTACCTGGTGACCTCTTACA+TGG | 0.367157 | 4_1:+59656411 | None:intergenic |
GGAAAAGAATTGGATGATAC+AGG | 0.367538 | 4_1:+59660021 | None:intergenic |
TGAACTTGATGGAAAAGAAT+TGG | 0.370030 | 4_1:+59660011 | None:intergenic |
TTGGTCGGGGACCTTATTAA+TGG | 0.371184 | 4_1:+59656286 | None:intergenic |
AAAGAAGTTAAAGTGCTTGT+TGG | 0.371798 | 4_1:+59660652 | None:intergenic |
TTACGCCCTGCAGAGATATT+AGG | 0.372239 | 4_1:-59663141 | Msa0560360:CDS |
GCTCAAAATCAAAAGAAAAT+AGG | 0.374943 | 4_1:+59658984 | None:intergenic |
CATTTAGCAGACGCCTGTAT+TGG | 0.375253 | 4_1:+59656135 | None:intergenic |
AGTCTTCCCCTGATATTTCA+TGG | 0.377076 | 4_1:-59658829 | Msa0560360:CDS |
TCCGCTGAACTACTGGGTTT+GGG | 0.377091 | 4_1:-59659046 | Msa0560360:CDS |
AAAAGGATAGTAACCTGAAA+AGG | 0.377758 | 4_1:+59660303 | None:intergenic |
CTGGGTTTGGGTAAAGAAAC+TGG | 0.378745 | 4_1:-59659034 | Msa0560360:CDS |
TGTCCACTACTTGGATGTTA+AGG | 0.380969 | 4_1:-59661884 | Msa0560360:intron |
TCTGGCTTTCCTGCAAATTA+CGG | 0.383525 | 4_1:-59660709 | Msa0560360:CDS |
CCATGTCCAGCATTCCCTTC+AGG | 0.383542 | 4_1:-59657143 | Msa0560360:CDS |
CTTTACTAGAAATGTAGATT+TGG | 0.384536 | 4_1:-59658110 | Msa0560360:CDS |
GGCATTCGATTGATCCTTTG+CGG | 0.385462 | 4_1:-59655891 | Msa0560360:exon |
CATTTGGTCCGTGGGAATCC+TGG | 0.387080 | 4_1:-59656369 | Msa0560360:CDS |
CTTTCATGAGTTGCATAATC+CGG | 0.391682 | 4_1:-59660386 | Msa0560360:CDS |
ACACCTGCAGATCTTGCTTC+TGG | 0.393291 | 4_1:-59657116 | Msa0560360:CDS |
CGCATGTTACCGTAATTTGC+AGG | 0.393954 | 4_1:+59660700 | None:intergenic |
ATGGCACAAAAGAAACTTTA+GGG | 0.395086 | 4_1:-59657004 | Msa0560360:CDS |
CTACATTTAGTTGCTGCTCT+TGG | 0.400628 | 4_1:-59657761 | Msa0560360:CDS |
GAATTGCAACGCCTGTGCAC+TGG | 0.401573 | 4_1:-59656953 | Msa0560360:CDS |
TATCTTTCATAGGCAGGTTA+AGG | 0.405053 | 4_1:-59657867 | Msa0560360:CDS |
TCTGTGCCCCATGAAATATC+AGG | 0.405361 | 4_1:+59658821 | None:intergenic |
TCTCTGACCCTCGTTTGAAT+TGG | 0.406378 | 4_1:+59660110 | None:intergenic |
ATTCCCACGGACCAAATGAT+TGG | 0.406432 | 4_1:+59656374 | None:intergenic |
ATTTAGCAGACGCCTGTATT+GGG | 0.411016 | 4_1:+59656136 | None:intergenic |
AATTGCAACGCCTGTGCACT+GGG | 0.412088 | 4_1:-59656952 | Msa0560360:CDS |
GTCCTGTATGTTCGGGGAAG+TGG | 0.412243 | 4_1:-59658272 | Msa0560360:CDS |
CGCTCCAGCAGCTGCACCCA+TGG | 0.413239 | 4_1:+59657175 | None:intergenic |
GTCTTCCCCTGATATTTCAT+GGG | 0.413274 | 4_1:-59658828 | Msa0560360:CDS |
TAATCTGAGTTCGATAAATT+CGG | 0.414296 | 4_1:-59655987 | Msa0560360:CDS |
AAGAAGTTAAAGTGCTTGTT+GGG | 0.415064 | 4_1:+59660653 | None:intergenic |
GAAGGCTGGTTGGTTGGTCG+GGG | 0.417447 | 4_1:+59656273 | None:intergenic |
CCTCATGTGTTTGGTAAAGA+TGG | 0.417549 | 4_1:-59657794 | Msa0560360:CDS |
AGAAGTACAAACCAATCATT+TGG | 0.419166 | 4_1:-59656385 | Msa0560360:CDS |
GCTTCTAAGTCATCCAAATC+TGG | 0.420233 | 4_1:-59656747 | Msa0560360:CDS |
GGTTGCTCTCCTTGTCTCCA+TGG | 0.421375 | 4_1:-59657192 | Msa0560360:CDS |
TGAAGGCACATATCTTTCAT+AGG | 0.423985 | 4_1:-59657877 | Msa0560360:CDS |
CTGACGGGCCGTCTATTAAC+AGG | 0.425461 | 4_1:+59655850 | None:intergenic |
TATAGTATTTGTCCACTACT+TGG | 0.426647 | 4_1:-59661893 | Msa0560360:CDS |
ACTGGAGGAGTTACTTACTT+TGG | 0.436854 | 4_1:-59658044 | Msa0560360:CDS |
GAAAAGGGGTGCATAAGATA+TGG | 0.438737 | 4_1:+59660319 | None:intergenic |
GCCAGATGCTATATGCCTTA+AGG | 0.440387 | 4_1:-59656922 | Msa0560360:CDS |
GGGAAGGCTGGTTGGTTGGT+CGG | 0.440505 | 4_1:+59656271 | None:intergenic |
CAGCGGCTTGTGTAGCATTA+CGG | 0.442930 | 4_1:+59656883 | None:intergenic |
CAGAAGCTCGGGCCCAATAC+AGG | 0.444672 | 4_1:-59656148 | Msa0560360:CDS |
CAAGCTCCACCTCATGAGAT+TGG | 0.446603 | 4_1:-59658208 | Msa0560360:CDS |
GGCACATATCTTTCATAGGC+AGG | 0.447036 | 4_1:-59657873 | Msa0560360:CDS |
TGTAATTGGTCCTGTATGTT+CGG | 0.447703 | 4_1:-59658280 | Msa0560360:CDS |
TAAAGTGCTTGTTGGGCTCA+TGG | 0.450539 | 4_1:+59660660 | None:intergenic |
GGTAAAGGACCTCATGTGTT+TGG | 0.450817 | 4_1:-59657803 | Msa0560360:CDS |
AATGTCATGGATAAATCTTC+AGG | 0.452873 | 4_1:-59660063 | Msa0560360:CDS |
AAAGGATAGTAACCTGAAAA+GGG | 0.454637 | 4_1:+59660304 | None:intergenic |
GGAGCGTTCTTCTCCTGAAA+TGG | 0.456053 | 4_1:-59664402 | Msa0560360:CDS |
ACCAACCAGCCTTCCCGAAA+AGG | 0.456564 | 4_1:-59656264 | Msa0560360:CDS |
GTTTGTACTTCTTTCTTACC+TGG | 0.458365 | 4_1:+59656396 | None:intergenic |
TTCGAGAAGGTTACGTAGAA+AGG | 0.458497 | 4_1:+59658178 | None:intergenic |
CAGGTTAACAAGACCAATGT+AGG | 0.458647 | 4_1:-59660790 | Msa0560360:CDS |
TCCTTAAGGCATATAGCATC+TGG | 0.459831 | 4_1:+59656921 | None:intergenic |
TCAAATTAACTCAAAAGAAA+AGG | 0.462317 | 4_1:-59664537 | Msa0560360:five_prime_UTR |
TTAACTCCAGAAGTTACAAT+TGG | 0.464038 | 4_1:+59657719 | None:intergenic |
CCATTAGCTAAAATTGTAGC+TGG | 0.466461 | 4_1:+59658244 | None:intergenic |
AAGGGCAGTTCTATGTCATC+TGG | 0.466818 | 4_1:-59660727 | Msa0560360:CDS |
TGATGACAACTTCTTACCTA+TGG | 0.472509 | 4_1:-59655912 | Msa0560360:CDS |
TAGAAAATACCTTGGTTTGA+CGG | 0.473512 | 4_1:+59656099 | None:intergenic |
GCAGATCTTGCTTCTGGCGA+TGG | 0.474264 | 4_1:-59657110 | Msa0560360:CDS |
GCCTCCAATAACTTCGCCTC+TGG | 0.480180 | 4_1:+59662227 | None:intergenic |
GAGTTGCATAATCCGGGAAA+TGG | 0.480366 | 4_1:-59660379 | Msa0560360:CDS |
TACCTGGTGACCTCTTACAT+GGG | 0.482192 | 4_1:+59656412 | None:intergenic |
TGCGAAACACTGAGCTTGCT+TGG | 0.482928 | 4_1:+59660410 | None:intergenic |
GTTCTTCCTGAAGGGAATGC+TGG | 0.486036 | 4_1:+59657137 | None:intergenic |
ATAGCACCAATTGTAACTTC+TGG | 0.488450 | 4_1:-59657725 | Msa0560360:CDS |
CCTGAAGGGAATGCTGGACA+TGG | 0.490271 | 4_1:+59657143 | None:intergenic |
TATTTGTACTGCAGCAGCAT+TGG | 0.491242 | 4_1:+59656707 | None:intergenic |
ATGGATGGACGGCTCTACAC+TGG | 0.493508 | 4_1:-59657676 | Msa0560360:CDS |
AGAATTCCTAATATCTCTGC+AGG | 0.493849 | 4_1:+59663135 | None:intergenic |
TCAAAGAGTTGTCAAAATCC+AGG | 0.494158 | 4_1:-59656634 | Msa0560360:intron |
AATTACCTCCCACTTGTTCA+GGG | 0.495564 | 4_1:-59660141 | Msa0560360:CDS |
CAGCATCAAGAGAATCCTTA+AGG | 0.496736 | 4_1:+59656907 | None:intergenic |
AGAAGCTGTCAACCTTCGTC+AGG | 0.496773 | 4_1:+59658897 | None:intergenic |
GAGCACTCAACATAGGGTCC+TGG | 0.496971 | 4_1:-59660089 | Msa0560360:CDS |
TCGAGTAATGAAGAGCCAAC+TGG | 0.497413 | 4_1:-59657926 | Msa0560360:CDS |
TTGAGGCACTTTAGAAGGGA+TGG | 0.497421 | 4_1:-59662539 | Msa0560360:CDS |
CGGTGGAGGCGTAAGGGCAG+TGG | 0.498062 | 4_1:-59656332 | Msa0560360:CDS |
TTTGAACTGTCAAAACTGAA+TGG | 0.499367 | 4_1:+59655764 | None:intergenic |
GGATGATACAGGGGAAGGTT+CGG | 0.500961 | 4_1:+59660032 | None:intergenic |
TTTCGGGAAGGCTGGTTGGT+TGG | 0.502036 | 4_1:+59656267 | None:intergenic |
AATGCGACATCATTTGCAAC+TGG | 0.503844 | 4_1:-59658062 | Msa0560360:CDS |
TATATTACGGTGGAGGCGTA+AGG | 0.504437 | 4_1:-59656339 | Msa0560360:CDS |
GTAATTGGTCCTGTATGTTC+GGG | 0.505156 | 4_1:-59658279 | Msa0560360:CDS |
CATCCATTGTGAGTGATTCA+AGG | 0.505159 | 4_1:+59657039 | None:intergenic |
TTATGCTGATTCAGAAATTG+AGG | 0.506793 | 4_1:-59658705 | Msa0560360:intron |
GAAATATCCATCTCTCCAGT+TGG | 0.507509 | 4_1:+59657911 | None:intergenic |
AGAAGTTACAATTGGTGCTA+TGG | 0.508586 | 4_1:+59657727 | None:intergenic |
TGTGATAGATGATACCTCAT+TGG | 0.509091 | 4_1:-59658786 | Msa0560360:CDS |
TTTATCCATGACATTGTCCC+AGG | 0.509557 | 4_1:+59660071 | None:intergenic |
GTCTCTGCAATCAAATTGGC+AGG | 0.510338 | 4_1:-59659956 | Msa0560360:intron |
TCCTGGAGAAGGTTATATTA+CGG | 0.511577 | 4_1:-59656352 | Msa0560360:CDS |
CAATTACACATTGTCACCTC+TGG | 0.511868 | 4_1:+59658295 | None:intergenic |
TTAGAAGGGATGGATACAAT+TGG | 0.512076 | 4_1:-59662529 | Msa0560360:CDS |
GTTGCTCTCCTTGTCTCCAT+GGG | 0.517325 | 4_1:-59657191 | Msa0560360:CDS |
CTACACTGGGCTGCATCATG+TGG | 0.518678 | 4_1:-59657662 | Msa0560360:CDS |
ATGTTAAAGGCCCATGTAAG+AGG | 0.521276 | 4_1:-59656422 | Msa0560360:intron |
CATAGAAGAAAGAAGCTGAC+TGG | 0.521636 | 4_1:-59664576 | Msa0560360:five_prime_UTR |
CATGGACTTAACCCTTAAAA+GGG | 0.522222 | 4_1:+59656181 | None:intergenic |
TTTCCTCTCCTGTTAATAGA+CGG | 0.524498 | 4_1:-59655858 | Msa0560360:three_prime_UTR |
CTCCACCTCATGAGATTGGA+CGG | 0.528271 | 4_1:-59658204 | Msa0560360:CDS |
CAGGAATTTGAGTACAAAGA+GGG | 0.529312 | 4_1:-59658133 | Msa0560360:CDS |
AAATCAAAAGAAAATAGGTC+AGG | 0.530279 | 4_1:+59658989 | None:intergenic |
TTTCATGAGTTGCATAATCC+GGG | 0.531246 | 4_1:-59660385 | Msa0560360:CDS |
ATAAACTTCCGTGATGTGAA+TGG | 0.531435 | 4_1:-59657695 | Msa0560360:CDS |
TAGAAACCATACTTGGTGGC+CGG | 0.532698 | 4_1:+59663070 | None:intergenic |
AGGCATAAGTACAGATACTA+AGG | 0.532801 | 4_1:-59660770 | Msa0560360:CDS |
TTGCAACGCCTGTGCACTGG+GGG | 0.533191 | 4_1:-59656950 | Msa0560360:CDS |
TGAAGAGCCAACTGGAGAGA+TGG | 0.533599 | 4_1:-59657918 | Msa0560360:CDS |
AGAAACCATACTTGGTGGCC+GGG | 0.535281 | 4_1:+59663071 | None:intergenic |
CTCATGTGTTTGGTAAAGAT+GGG | 0.535877 | 4_1:-59657793 | Msa0560360:CDS |
TCGCCAGAAGCAAGATCTGC+AGG | 0.537099 | 4_1:+59657113 | None:intergenic |
TCTGTCTTCAACGAAGGAAG+TGG | 0.537368 | 4_1:-59659985 | Msa0560360:CDS |
ACTGGGCTGCATCATGTGGC+AGG | 0.538074 | 4_1:-59657658 | Msa0560360:intron |
TCCAGAGGCGAAGTTATTGG+AGG | 0.539110 | 4_1:-59662228 | Msa0560360:CDS |
GCTTCTGGCGATGGCCAGAA+AGG | 0.539832 | 4_1:-59657101 | Msa0560360:CDS |
GGTCAGAGAGCACTCAACAT+AGG | 0.543054 | 4_1:-59660096 | Msa0560360:CDS |
TGGTTCAGTATCCAGAAGCT+CGG | 0.545136 | 4_1:-59656160 | Msa0560360:CDS |
GTCAGAGAGCACTCAACATA+GGG | 0.545853 | 4_1:-59660095 | Msa0560360:CDS |
GGTTACATCAGATTCCCAAA+AGG | 0.546119 | 4_1:-59660746 | Msa0560360:CDS |
GGTTCAGTATCCAGAAGCTC+GGG | 0.547885 | 4_1:-59656159 | Msa0560360:CDS |
TATTTCAAAACACAGGTTGA+AGG | 0.548307 | 4_1:-59657894 | Msa0560360:CDS |
GCTGGTCTTGAGATTGAGAC+AGG | 0.548908 | 4_1:+59658762 | None:intergenic |
TTCCACTTCCCCGAACATAC+AGG | 0.549580 | 4_1:+59658270 | None:intergenic |
ACCGTAATATAACCTTCTCC+AGG | 0.551191 | 4_1:+59656351 | None:intergenic |
ATCCAAATCTGGACATGGGG+AGG | 0.552979 | 4_1:-59656736 | Msa0560360:CDS |
TCAGTATGAAGAGGATGATG+AGG | 0.553757 | 4_1:-59656808 | Msa0560360:CDS |
AGTCATGTATGCTAAACAGC+TGG | 0.554108 | 4_1:+59658744 | None:intergenic |
GGAAGCTCATGAGAAGTTGA+AGG | 0.554386 | 4_1:-59662477 | Msa0560360:intron |
GAGAAAGATCAACGCGGAAA+GGG | 0.555498 | 4_1:+59664464 | None:intergenic |
CTTTACTCAATCGTTAAGCA+TGG | 0.555851 | 4_1:-59659086 | Msa0560360:CDS |
CGGATTATGCAACTCATGAA+AGG | 0.556996 | 4_1:+59660387 | None:intergenic |
AGTTTGAAGCACAGCATCGA+TGG | 0.557059 | 4_1:-59663164 | Msa0560360:CDS |
TCTGCAGGTGTTCTTCCTGA+AGG | 0.557364 | 4_1:+59657128 | None:intergenic |
GAGTGAACAAAAGTTCCAAA+AGG | 0.557664 | 4_1:-59656204 | Msa0560360:CDS |
GGCCCATGTAAGAGGTCACC+AGG | 0.559386 | 4_1:-59656414 | Msa0560360:CDS |
CTGTGCCCCATGAAATATCA+GGG | 0.560571 | 4_1:+59658822 | None:intergenic |
AACTATTCCGCTGAACTACT+GGG | 0.561115 | 4_1:-59659052 | Msa0560360:CDS |
AGAGAAAGATCAACGCGGAA+AGG | 0.561625 | 4_1:+59664463 | None:intergenic |
GTTACATCAGATTCCCAAAA+GGG | 0.561877 | 4_1:-59660745 | Msa0560360:CDS |
GAGTTCGATAAATTCGGAAG+AGG | 0.562641 | 4_1:-59655981 | Msa0560360:CDS |
TCTCAAAAGAACCGCCTACC+CGG | 0.563454 | 4_1:-59663089 | Msa0560360:CDS |
AGCACTCAACATAGGGTCCT+GGG | 0.567035 | 4_1:-59660088 | Msa0560360:CDS |
GATTAAAGAATTTGCATCAG+TGG | 0.567503 | 4_1:-59658867 | Msa0560360:CDS |
AAAGTAACTGAAACTGGTAA+AGG | 0.568633 | 4_1:-59657818 | Msa0560360:CDS |
ATGGATGATGTGAATAAAGA+TGG | 0.571903 | 4_1:-59657023 | Msa0560360:CDS |
TCAATGTCTGTCTTCAACGA+AGG | 0.572676 | 4_1:-59659991 | Msa0560360:CDS |
CAGCTGCACCCATGGAGACA+AGG | 0.573677 | 4_1:+59657183 | None:intergenic |
ATACTTGGTGGCCGGGTAGG+CGG | 0.574037 | 4_1:+59663078 | None:intergenic |
CGTAAGGGCAGTGGTTTACG+TGG | 0.575467 | 4_1:-59656323 | Msa0560360:CDS |
TTAAGGAGAAGCTGTACTCA+TGG | 0.575527 | 4_1:-59657850 | Msa0560360:CDS |
CTGCAGGTGTTCTTCCTGAA+GGG | 0.576107 | 4_1:+59657129 | None:intergenic |
TCCAAATCTGGACATGGGGA+GGG | 0.579121 | 4_1:-59656735 | Msa0560360:CDS |
TGGATGGACGGCTCTACACT+GGG | 0.581082 | 4_1:-59657675 | Msa0560360:CDS |
TACTTGATGTATTCTATCAG+CGG | 0.582154 | 4_1:+59656866 | None:intergenic |
ACCCGTCCAATCTCATGAGG+TGG | 0.583328 | 4_1:+59658202 | None:intergenic |
TTATTCAGTCTTCACTATGA+CGG | 0.583566 | 4_1:-59664423 | Msa0560360:exon |
AAGTCATCCAAATCTGGACA+TGG | 0.586904 | 4_1:-59656741 | Msa0560360:CDS |
AACCCTTTCGAAGAAAATGC+GGG | 0.587545 | 4_1:-59659127 | Msa0560360:CDS |
GTCCGTGGGAATCCTGGAGA+AGG | 0.588343 | 4_1:-59656363 | Msa0560360:CDS |
AGGGTCCTGGGACAATGTCA+TGG | 0.588470 | 4_1:-59660076 | Msa0560360:CDS |
AAGGATCAATCGAATGCCAT+AGG | 0.590654 | 4_1:+59655896 | None:intergenic |
AAACCAATCATTTGGTCCGT+GGG | 0.591404 | 4_1:-59656377 | Msa0560360:CDS |
GAAAAGAATTGGATGATACA+GGG | 0.592068 | 4_1:+59660022 | None:intergenic |
ATCTGTACTTATGCCTACAT+TGG | 0.592564 | 4_1:+59660777 | None:intergenic |
TCCGGGAAATGGTCCACAGA+CGG | 0.593297 | 4_1:-59660368 | Msa0560360:CDS |
ACCATACTTGGTGGCCGGGT+AGG | 0.593595 | 4_1:+59663075 | None:intergenic |
GCAGCTAGCTCAGTATGAAG+AGG | 0.595976 | 4_1:-59656817 | Msa0560360:CDS |
ATCTTTCAAACATAGGTGGA+AGG | 0.598899 | 4_1:-59662301 | Msa0560360:intron |
GAAAGAAGTAGCCACCGCAA+AGG | 0.598994 | 4_1:+59655877 | None:intergenic |
CAGGCGTCTGCTAAATGTAG+TGG | 0.601069 | 4_1:-59656129 | Msa0560360:CDS |
TTACCTCCCACTTGTTCAGG+GGG | 0.602984 | 4_1:-59660139 | Msa0560360:CDS |
GCAAGCAAATCTATTCGAGA+AGG | 0.603550 | 4_1:+59658165 | None:intergenic |
TCTTCCCCTGATATTTCATG+GGG | 0.604539 | 4_1:-59658827 | Msa0560360:CDS |
TTACCTTAACATCCAAGTAG+TGG | 0.606730 | 4_1:+59661881 | None:intergenic |
CAAACCAATCATTTGGTCCG+TGG | 0.607032 | 4_1:-59656378 | Msa0560360:CDS |
ATTACCTCCCACTTGTTCAG+GGG | 0.608046 | 4_1:-59660140 | Msa0560360:CDS |
TCCACCTCATGAGATTGGAC+GGG | 0.608713 | 4_1:-59658203 | Msa0560360:CDS |
AGAAGGTTATATTACGGTGG+AGG | 0.609021 | 4_1:-59656346 | Msa0560360:CDS |
ATACACTGCTACTACGCCCA+TGG | 0.609101 | 4_1:-59662268 | Msa0560360:CDS |
AACCAGCCTTCCCGAAAAGG+AGG | 0.610047 | 4_1:-59656261 | Msa0560360:CDS |
ATATTACGGTGGAGGCGTAA+GGG | 0.610245 | 4_1:-59656338 | Msa0560360:CDS |
AAAGATCAACGCGGAAAGGG+AGG | 0.610389 | 4_1:+59664467 | None:intergenic |
AATTCGGAAGAGGCAGCTGA+TGG | 0.613503 | 4_1:-59655971 | Msa0560360:CDS |
TCAGGAATTTGAGTACAAAG+AGG | 0.616104 | 4_1:-59658134 | Msa0560360:CDS |
AGTCATCCAAATCTGGACAT+GGG | 0.619839 | 4_1:-59656740 | Msa0560360:CDS |
GTCATCCAAATCTGGACATG+GGG | 0.620280 | 4_1:-59656739 | Msa0560360:CDS |
TTATATGCTCAGAGAGAGAA+CGG | 0.620970 | 4_1:-59657213 | Msa0560360:intron |
AGATGGATATTTCAAAACAC+AGG | 0.621087 | 4_1:-59657901 | Msa0560360:CDS |
CCGTCCATCCATTCACATCA+CGG | 0.622728 | 4_1:+59657687 | None:intergenic |
GGAAGAGGCAGCTGATGGTG+TGG | 0.625414 | 4_1:-59655966 | Msa0560360:CDS |
ACCCAAACCCAGTAGTTCAG+CGG | 0.628373 | 4_1:+59659045 | None:intergenic |
ACTTCCGTGATGTGAATGGA+TGG | 0.628720 | 4_1:-59657691 | Msa0560360:CDS |
AATTGGCGAAAGAAGAACGA+TGG | 0.632926 | 4_1:-59662512 | Msa0560360:CDS |
GAACCCTTTCGAAGAAAATG+CGG | 0.635965 | 4_1:-59659128 | Msa0560360:CDS |
CCACCTTGAATCACTCACAA+TGG | 0.636284 | 4_1:-59657042 | Msa0560360:CDS |
AAGGATAGTAACCTGAAAAG+GGG | 0.639659 | 4_1:+59660305 | None:intergenic |
CCGTGATGTGAATGGATGGA+CGG | 0.639667 | 4_1:-59657687 | Msa0560360:CDS |
AACCTTCTCCAGGATTCCCA+CGG | 0.641059 | 4_1:+59656361 | None:intergenic |
GAATTGGATGATACAGGGGA+AGG | 0.641814 | 4_1:+59660027 | None:intergenic |
GCATCAATCTTATCCGTCTG+TGG | 0.641952 | 4_1:+59660355 | None:intergenic |
GCGACATCATTTGCAACTGG+AGG | 0.643033 | 4_1:-59658059 | Msa0560360:CDS |
AGAGGCAGCTGATGGTGTGG+AGG | 0.643223 | 4_1:-59655963 | Msa0560360:CDS |
AAAAGAATTGGATGATACAG+GGG | 0.645982 | 4_1:+59660023 | None:intergenic |
TGCTAAAGAGAGCCTGACGA+AGG | 0.648562 | 4_1:-59658909 | Msa0560360:CDS |
ATTCGATTGATCCTTTGCGG+TGG | 0.654921 | 4_1:-59655888 | Msa0560360:exon |
TCATGGGGCACAGATGAATG+TGG | 0.662910 | 4_1:-59658812 | Msa0560360:CDS |
GGGCCGTCTATTAACAGGAG+AGG | 0.665333 | 4_1:+59655855 | None:intergenic |
GGAACCCGTCCAATCTCATG+AGG | 0.671886 | 4_1:+59658199 | None:intergenic |
GTGGCTAGTTAATAATGACT+CGG | 0.672440 | 4_1:+59657061 | None:intergenic |
CATAAGTACAGATACTAAGG+AGG | 0.672927 | 4_1:-59660767 | Msa0560360:CDS |
AAGATAATGAAAATTTCCAG+AGG | 0.673367 | 4_1:-59662243 | Msa0560360:CDS |
GGTAAATCCAATTCAAACGA+GGG | 0.680378 | 4_1:-59660117 | Msa0560360:CDS |
ATTGCAACGCCTGTGCACTG+GGG | 0.681592 | 4_1:-59656951 | Msa0560360:CDS |
CCATCTTTACCAAACACATG+AGG | 0.684954 | 4_1:+59657794 | None:intergenic |
TGGAGAAGGTTATATTACGG+TGG | 0.685543 | 4_1:-59656349 | Msa0560360:CDS |
GAATTCCTAATATCTCTGCA+GGG | 0.686153 | 4_1:+59663136 | None:intergenic |
AAGGAAAGAACGAACGACGG+TGG | 0.687189 | 4_1:-59664518 | Msa0560360:five_prime_UTR |
AGCTTCTGGATACTGAACCA+TGG | 0.689349 | 4_1:+59656163 | None:intergenic |
GGGTAAATCCAATTCAAACG+AGG | 0.693024 | 4_1:-59660118 | Msa0560360:CDS |
AGATTGAGACAGGTCCAATG+AGG | 0.694058 | 4_1:+59658772 | None:intergenic |
ATTTGTGAATAGTAGACCAG+AGG | 0.696270 | 4_1:-59658311 | Msa0560360:CDS |
CCTTTCGAAGAAAATGCGGG+CGG | 0.696728 | 4_1:-59659124 | Msa0560360:CDS |
TACCTCCCACTTGTTCAGGG+GGG | 0.703226 | 4_1:-59660138 | Msa0560360:CDS |
GGACGATTACCGTCAAACCA+AGG | 0.706351 | 4_1:-59656108 | Msa0560360:intron |
GTGTTTGGTAAAGATGGGCA+AGG | 0.707666 | 4_1:-59657788 | Msa0560360:CDS |
GAAAAGGAAAGAACGAACGA+CGG | 0.714322 | 4_1:-59664521 | Msa0560360:five_prime_UTR |
TGTGCATCAAAACTTGCACA+CGG | 0.720382 | 4_1:-59658948 | Msa0560360:CDS |
TGTGCCCCATGAAATATCAG+GGG | 0.720500 | 4_1:+59658823 | None:intergenic |
TGCAACGCCTGTGCACTGGG+GGG | 0.729574 | 4_1:-59656949 | Msa0560360:CDS |
CCATTGTGAGTGATTCAAGG+TGG | 0.735758 | 4_1:+59657042 | None:intergenic |
TAATTGGTCCTGTATGTTCG+GGG | 0.752132 | 4_1:-59658278 | Msa0560360:CDS |
TAATGAGAGAAAGATCAACG+CGG | 0.824290 | 4_1:+59664458 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTTAAGTAAAACTTTAT+TGG | + | chr4_1:59658379-59658398 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTTGAAAACT+CGG | - | chr4_1:59660701-59660720 | Msa0560360:CDS | 10.0% |
!! | AAAAAAAGTTAACAATAAAA+TGG | + | chr4_1:59661014-59661033 | None:intergenic | 10.0% |
!! | TCAAATATAAAATTAAAACA+AGG | + | chr4_1:59661141-59661160 | None:intergenic | 10.0% |
!! | AACAATAAAGAAAATATATT+GGG | + | chr4_1:59662738-59662757 | None:intergenic | 10.0% |
!! | AAACAATAAAGAAAATATAT+TGG | + | chr4_1:59662739-59662758 | None:intergenic | 10.0% |
!!! | AAATAGTTCAAAATTATTTT+TGG | - | chr4_1:59662977-59662996 | Msa0560360:intron | 10.0% |
!! | ATATAATCCATTTAATTAAC+AGG | + | chr4_1:59656092-59656111 | None:intergenic | 15.0% |
!!! | GATTTTTACAAAAACAAAAT+CGG | + | chr4_1:59656313-59656332 | None:intergenic | 15.0% |
!! | TTGATTTAATTAGGTTTAAT+CGG | - | chr4_1:59656524-59656543 | Msa0560360:intron | 15.0% |
!! | AATATATAAATAAATGTGTG+AGG | - | chr4_1:59659027-59659046 | Msa0560360:CDS | 15.0% |
!! | ATATATAAATAAATGTGTGA+GGG | - | chr4_1:59659028-59659047 | Msa0560360:CDS | 15.0% |
!!! | ACTTTTTAATAGATGTTTTA+TGG | - | chr4_1:59659538-59659557 | Msa0560360:intron | 15.0% |
!!! | CTTTTTAATAGATGTTTTAT+GGG | - | chr4_1:59659539-59659558 | Msa0560360:intron | 15.0% |
!! | ATTTGAGAAAGAAAAAAAAA+AGG | + | chr4_1:59660081-59660100 | None:intergenic | 15.0% |
!! | TGAAAATTATTAGTACAAAT+GGG | + | chr4_1:59660637-59660656 | None:intergenic | 15.0% |
!! | TTGAAAATTATTAGTACAAA+TGG | + | chr4_1:59660638-59660657 | None:intergenic | 15.0% |
!! | AAGTATTCTTTAGATATTTA+CGG | + | chr4_1:59661691-59661710 | None:intergenic | 15.0% |
!!! | TATTTTTGGAAAAATTACAT+TGG | - | chr4_1:59662991-59663010 | Msa0560360:intron | 15.0% |
!! | ACTTCATGATATATATTAAA+TGG | + | chr4_1:59663109-59663128 | None:intergenic | 15.0% |
!! | ATTTAATATATATCATGAAG+TGG | - | chr4_1:59663108-59663127 | Msa0560360:CDS | 15.0% |
!! | AAAAGAAAAGTTATATCAAT+GGG | + | chr4_1:59663852-59663871 | None:intergenic | 15.0% |
!! | AAAAAGAAAAGTTATATCAA+TGG | + | chr4_1:59663853-59663872 | None:intergenic | 15.0% |
!!! | TTAATGATTGATATTTTCTT+TGG | - | chr4_1:59664332-59664351 | Msa0560360:intron | 15.0% |
!! | AAAAAAAGAAAAAAAACTGA+CGG | + | chr4_1:59664533-59664552 | None:intergenic | 15.0% |
!! | TCAAATTAACTCAAAAGAAA+AGG | - | chr4_1:59655827-59655846 | Msa0560360:three_prime_UTR | 20.0% |
!!! | TCGTTTGTTTTTATAGAATT+AGG | - | chr4_1:59656147-59656166 | Msa0560360:CDS | 20.0% |
!!! | CGTTTGTTTTTATAGAATTA+GGG | - | chr4_1:59656148-59656167 | Msa0560360:CDS | 20.0% |
!!! | GTTTTTGTAAAAATCTGTTT+TGG | - | chr4_1:59656318-59656337 | Msa0560360:CDS | 20.0% |
!! | AAAAACTGAATTGAATTGAA+TGG | + | chr4_1:59656366-59656385 | None:intergenic | 20.0% |
!!! | TCAGTTTTGGTTTATTTTAT+AGG | - | chr4_1:59656476-59656495 | Msa0560360:intron | 20.0% |
!!! | CAGTTTTGGTTTATTTTATA+GGG | - | chr4_1:59656477-59656496 | Msa0560360:intron | 20.0% |
!!! | TCTTTGTTGTTGATTTAATT+AGG | - | chr4_1:59656515-59656534 | Msa0560360:intron | 20.0% |
!! | ACAAGAATAATTGATTAACT+CGG | + | chr4_1:59656745-59656764 | None:intergenic | 20.0% |
!!! | TATTCTTGTACTGATTATAT+CGG | - | chr4_1:59656756-59656775 | Msa0560360:CDS | 20.0% |
!!! | TTTTTTGTGAAAATCAGTTT+TGG | - | chr4_1:59656790-59656809 | Msa0560360:CDS | 20.0% |
!!! | AATTTATTTTTGCTGCTAAT+TGG | + | chr4_1:59657055-59657074 | None:intergenic | 20.0% |
!! | TAATGAACTAAACATAAGAT+AGG | + | chr4_1:59657320-59657339 | None:intergenic | 20.0% |
!! | AAAATAGATCATTATACTCA+CGG | + | chr4_1:59658168-59658187 | None:intergenic | 20.0% |
!! | AATACATTAACATGCTATTA+AGG | + | chr4_1:59658614-59658633 | None:intergenic | 20.0% |
!! | TATATAAATAAATGTGTGAG+GGG | - | chr4_1:59659029-59659048 | Msa0560360:CDS | 20.0% |
!!! | TAATTACCAGAAAATTTTAG+TGG | + | chr4_1:59659061-59659080 | None:intergenic | 20.0% |
!! | CAAGAAAATTATCATAGAAA+TGG | + | chr4_1:59659466-59659485 | None:intergenic | 20.0% |
!!! | ATGATAATTTTCTTGAAAAC+AGG | - | chr4_1:59659471-59659490 | Msa0560360:intron | 20.0% |
!! | GGATTATACATTATAAAACA+CGG | - | chr4_1:59659778-59659797 | Msa0560360:intron | 20.0% |
!! | GCATATTAAATCAGATTATA+AGG | + | chr4_1:59659805-59659824 | None:intergenic | 20.0% |
!! | TTGCAACATATAATTTCATA+TGG | - | chr4_1:59659852-59659871 | Msa0560360:intron | 20.0% |
!! | CATGTAATTACTTAATAGTT+TGG | - | chr4_1:59659877-59659896 | Msa0560360:intron | 20.0% |
!!! | TTTGCATTTTAATTTTGTTG+TGG | - | chr4_1:59660181-59660200 | Msa0560360:intron | 20.0% |
!! | TTGAAATTATAGAAATGCTA+AGG | - | chr4_1:59660979-59660998 | Msa0560360:intron | 20.0% |
!! | CAACAATTCAAATAACAAAA+TGG | + | chr4_1:59661211-59661230 | None:intergenic | 20.0% |
!! | AAGCAATCAAATTCAAAATA+TGG | + | chr4_1:59662826-59662845 | None:intergenic | 20.0% |
!! | AAAAAAGAAAAAAAACTGAC+GGG | + | chr4_1:59664532-59664551 | None:intergenic | 20.0% |
!!! | GTTTTTTTTCTTTTTTTGCT+TGG | - | chr4_1:59664536-59664555 | Msa0560360:five_prime_UTR | 20.0% |
!! | TTTATTCTGTTCTGTGATTT+TGG | - | chr4_1:59656063-59656082 | Msa0560360:intron | 25.0% |
! | TTGGAATCCTGTTAATTAAA+TGG | - | chr4_1:59656082-59656101 | Msa0560360:intron | 25.0% |
! | TTACTCTGTTGAATGAATTA+CGG | - | chr4_1:59656178-59656197 | Msa0560360:CDS | 25.0% |
!! | GAATGTTATTGATTGTGTTT+AGG | - | chr4_1:59656208-59656227 | Msa0560360:CDS | 25.0% |
!!! | CTAGTAGATTTTAATGTGAA+TGG | - | chr4_1:59656234-59656253 | Msa0560360:CDS | 25.0% |
!! | TCAATTCAATTCAGTTTTTG+TGG | - | chr4_1:59656367-59656386 | Msa0560360:CDS | 25.0% |
!!! | TCAGTTTTGGTTTGTTTTAT+AGG | - | chr4_1:59656393-59656412 | Msa0560360:CDS | 25.0% |
!!! | CAGTTTTGGTTTGTTTTATA+GGG | - | chr4_1:59656394-59656413 | Msa0560360:CDS | 25.0% |
!!! | TCTTTGTTGTTGATCTAATT+AGG | - | chr4_1:59656432-59656451 | Msa0560360:intron | 25.0% |
! | TGATCTAATTAGGTTAAATC+AGG | - | chr4_1:59656442-59656461 | Msa0560360:intron | 25.0% |
! | GATCTAATTAGGTTAAATCA+GGG | - | chr4_1:59656443-59656462 | Msa0560360:intron | 25.0% |
! | TTAAAAGATGTTAATGTGAG+AGG | - | chr4_1:59656580-59656599 | Msa0560360:intron | 25.0% |
!!! | TACGTTTTTTATTGCTAACT+TGG | - | chr4_1:59656631-59656650 | Msa0560360:intron | 25.0% |
!! | TGTTTTGTGATTATCGAAAT+TGG | - | chr4_1:59656717-59656736 | Msa0560360:CDS | 25.0% |
! | AGCTGAATTCTTATAATTGT+TGG | - | chr4_1:59657511-59657530 | Msa0560360:intron | 25.0% |
!! | TTTTCAATCGGAAAATTTTG+AGG | - | chr4_1:59657808-59657827 | Msa0560360:CDS | 25.0% |
! | GGTAACAATGTAATTTACTT+CGG | - | chr4_1:59657908-59657927 | Msa0560360:CDS | 25.0% |
! | TTGTGATATCTTTCAAACAT+AGG | - | chr4_1:59658056-59658075 | Msa0560360:CDS | 25.0% |
!! | ATTTTCATTATCTTCTCCAT+GGG | + | chr4_1:59658115-59658134 | None:intergenic | 25.0% |
!! | AATTTTCATTATCTTCTCCA+TGG | + | chr4_1:59658116-59658135 | None:intergenic | 25.0% |
! | AAGATAATGAAAATTTCCAG+AGG | - | chr4_1:59658121-59658140 | Msa0560360:CDS | 25.0% |
! | TCTTGAAATTAATCAGCATA+TGG | - | chr4_1:59658410-59658429 | Msa0560360:intron | 25.0% |
!! | TGAATTATCTTTTTACTGCA+GGG | - | chr4_1:59658438-59658457 | Msa0560360:intron | 25.0% |
! | TATTTCACACTTGTAATTTC+TGG | - | chr4_1:59658522-59658541 | Msa0560360:intron | 25.0% |
! | TTGTTTGATGAAATTAGTGT+TGG | - | chr4_1:59658662-59658681 | Msa0560360:intron | 25.0% |
!! | TACTATCCACTAAAATTTTC+TGG | - | chr4_1:59659052-59659071 | Msa0560360:CDS | 25.0% |
! | TGTCTAATGCCTTAATATTT+AGG | - | chr4_1:59659175-59659194 | Msa0560360:intron | 25.0% |
! | GTCTAATGCCTTAATATTTA+GGG | - | chr4_1:59659176-59659195 | Msa0560360:intron | 25.0% |
!!! | GAATCAATTAGTTTTAGTGA+GGG | + | chr4_1:59659233-59659252 | None:intergenic | 25.0% |
!!! | AATCCTTTTTAAGACTCTAA+AGG | - | chr4_1:59659440-59659459 | Msa0560360:intron | 25.0% |
!!! | AAAACTTTTGAGGCTAATTT+TGG | - | chr4_1:59659497-59659516 | Msa0560360:intron | 25.0% |
! | AACTCTCATATATTGTCTAA+TGG | - | chr4_1:59659757-59659776 | Msa0560360:intron | 25.0% |
! | TAATCTGATTTAATATGCCA+AGG | - | chr4_1:59659807-59659826 | Msa0560360:intron | 25.0% |
!! | ACTTAATAGTTTGGTTCATT+TGG | - | chr4_1:59659886-59659905 | Msa0560360:intron | 25.0% |
!! | CTTAATAGTTTGGTTCATTT+GGG | - | chr4_1:59659887-59659906 | Msa0560360:intron | 25.0% |
! | AATTTGATCCTGAAATCAAT+AGG | + | chr4_1:59660207-59660226 | None:intergenic | 25.0% |
!!! | GAGATCTGATATTTTAAGTT+CGG | - | chr4_1:59660534-59660553 | Msa0560360:intron | 25.0% |
! | AATGACTAACTTCATTGAAA+GGG | + | chr4_1:59660612-59660631 | None:intergenic | 25.0% |
! | AATACTGATATAACCAACTT+GGG | + | chr4_1:59660911-59660930 | None:intergenic | 25.0% |
! | TAATACTGATATAACCAACT+TGG | + | chr4_1:59660912-59660931 | None:intergenic | 25.0% |
! | AAATCAAAAGAAAATAGGTC+AGG | + | chr4_1:59661378-59661397 | None:intergenic | 25.0% |
! | GCTCAAAATCAAAAGAAAAT+AGG | + | chr4_1:59661383-59661402 | None:intergenic | 25.0% |
!! | GCTGAGAATAAGTAATTTTT+AGG | + | chr4_1:59661757-59661776 | None:intergenic | 25.0% |
!! | CACGCAATTATATAACTTTT+AGG | + | chr4_1:59661821-59661840 | None:intergenic | 25.0% |
! | TTATTTATCAACTCTTGTTC+TGG | - | chr4_1:59661861-59661880 | Msa0560360:intron | 25.0% |
!! | ACTTTTTATCAAAACCATAC+AGG | - | chr4_1:59662014-59662033 | Msa0560360:intron | 25.0% |
! | CTTTACTAGAAATGTAGATT+TGG | - | chr4_1:59662254-59662273 | Msa0560360:CDS | 25.0% |
! | CAAATTCAAAATATGGAGAT+GGG | + | chr4_1:59662819-59662838 | None:intergenic | 25.0% |
! | TCAAATTCAAAATATGGAGA+TGG | + | chr4_1:59662820-59662839 | None:intergenic | 25.0% |
! | AAGGATGTATCAAATGTATA+AGG | + | chr4_1:59663902-59663921 | None:intergenic | 25.0% |
! | TAATCTGAGTTCGATAAATT+CGG | - | chr4_1:59664377-59664396 | Msa0560360:intron | 25.0% |
TTATTCAGTCTTCACTATGA+CGG | - | chr4_1:59655941-59655960 | Msa0560360:CDS | 30.0% | |
!! | GATTTTAATGTGAATGGCTT+TGG | - | chr4_1:59656240-59656259 | Msa0560360:CDS | 30.0% |
! | GTTTTTGTGGAAATCAGTTT+TGG | - | chr4_1:59656380-59656399 | Msa0560360:CDS | 30.0% |
!!! | TTGGTTTGTTTTATAGGGTT+AGG | - | chr4_1:59656399-59656418 | Msa0560360:CDS | 30.0% |
!!! | TGGTTTGTTTTATAGGGTTA+GGG | - | chr4_1:59656400-59656419 | Msa0560360:CDS | 30.0% |
! | GAATGCTATTGATTGTGTTT+AGG | - | chr4_1:59656557-59656576 | Msa0560360:intron | 30.0% |
! | GGACTATAATTTGACTTCAA+TGG | - | chr4_1:59656606-59656625 | Msa0560360:intron | 30.0% |
!!! | TCAGTTTTGGTTTGTTATAG+AGG | - | chr4_1:59656803-59656822 | Msa0560360:CDS | 30.0% |
!! | TTGGTTTGTTATAGAGGATT+AGG | - | chr4_1:59656809-59656828 | Msa0560360:CDS | 30.0% |
!! | TGGTTTGTTATAGAGGATTA+GGG | - | chr4_1:59656810-59656829 | Msa0560360:CDS | 30.0% |
GAATTACTGTTGAATCGATT+AGG | - | chr4_1:59656844-59656863 | Msa0560360:CDS | 30.0% | |
TTGAATCGATTAGGTTTAGT+TGG | - | chr4_1:59656853-59656872 | Msa0560360:CDS | 30.0% | |
! | ACTTTGAAGGCTATTAAACT+AGG | - | chr4_1:59656881-59656900 | Msa0560360:CDS | 30.0% |
CTAGGATATGTTAATGTGAA+TGG | - | chr4_1:59656899-59656918 | Msa0560360:CDS | 30.0% | |
ATATGTTAATGTGAATGGCT+TGG | - | chr4_1:59656904-59656923 | Msa0560360:CDS | 30.0% | |
CTCAATATATGCTAATTGTC+TGG | - | chr4_1:59656961-59656980 | Msa0560360:CDS | 30.0% | |
TGTATGGAAAAGACTCAAAA+AGG | + | chr4_1:59657349-59657368 | None:intergenic | 30.0% | |
! | AAATCTTCTCTGTAGTTTGT+AGG | - | chr4_1:59657643-59657662 | Msa0560360:intron | 30.0% |
! | AATCTTCTCTGTAGTTTGTA+GGG | - | chr4_1:59657644-59657663 | Msa0560360:intron | 30.0% |
CATGAACAAAAGATTACTAG+CGG | + | chr4_1:59657672-59657691 | None:intergenic | 30.0% | |
! | GACATGTATTTGATGATTTC+AGG | - | chr4_1:59657771-59657790 | Msa0560360:CDS | 30.0% |
! | ATGTATTTGATGATTTCAGG+TGG | - | chr4_1:59657774-59657793 | Msa0560360:CDS | 30.0% |
!!! | GATCGCTTTTTCTTTTCAAT+CGG | - | chr4_1:59657796-59657815 | Msa0560360:CDS | 30.0% |
!!! | AAATTTTGAGGCACTTTAGA+AGG | - | chr4_1:59657820-59657839 | Msa0560360:CDS | 30.0% |
!!! | AATTTTGAGGCACTTTAGAA+GGG | - | chr4_1:59657821-59657840 | Msa0560360:CDS | 30.0% |
TTCAGCTAATCTTCTCTAAT+TGG | - | chr4_1:59657993-59658012 | Msa0560360:CDS | 30.0% | |
TGATATCTTTCAAACATAGG+TGG | - | chr4_1:59658059-59658078 | Msa0560360:CDS | 30.0% | |
! | TAATTCAGTAGTTTGAAGCT+CGG | + | chr4_1:59658265-59658284 | None:intergenic | 30.0% |
! | CTGAATTATCTTTTTACTGC+AGG | - | chr4_1:59658437-59658456 | Msa0560360:intron | 30.0% |
TATAGTATTTGTCCACTACT+TGG | - | chr4_1:59658471-59658490 | Msa0560360:intron | 30.0% | |
!!! | GTTTTTTTTTTCTCACGTGT+TGG | - | chr4_1:59658557-59658576 | Msa0560360:intron | 30.0% |
GCTTCAGGAAAAAAAATACT+TGG | + | chr4_1:59658755-59658774 | None:intergenic | 30.0% | |
TAATTTAACCTGTGAATGTG+CGG | - | chr4_1:59658823-59658842 | Msa0560360:CDS | 30.0% | |
! | GAAGAAACTCAATACTGATT+TGG | + | chr4_1:59658865-59658884 | None:intergenic | 30.0% |
! | TAATTTTTGTGGCTACCAAT+TGG | - | chr4_1:59659127-59659146 | Msa0560360:CDS | 30.0% |
TAGACACACAAGATAACAAT+GGG | + | chr4_1:59659161-59659180 | None:intergenic | 30.0% | |
TTAGACACACAAGATAACAA+TGG | + | chr4_1:59659162-59659181 | None:intergenic | 30.0% | |
TGTCTTCACCCTAAATATTA+AGG | + | chr4_1:59659187-59659206 | None:intergenic | 30.0% | |
!!! | CGAATCAATTAGTTTTAGTG+AGG | + | chr4_1:59659234-59659253 | None:intergenic | 30.0% |
!! | CACTAAAACTAATTGATTCG+TGG | - | chr4_1:59659234-59659253 | Msa0560360:intron | 30.0% |
! | TGTGTTATTATCTTCCTACA+AGG | - | chr4_1:59659357-59659376 | Msa0560360:intron | 30.0% |
! | GTGTTATTATCTTCCTACAA+GGG | - | chr4_1:59659358-59659377 | Msa0560360:intron | 30.0% |
TAACTCGGTATCATCAATTT+GGG | + | chr4_1:59659413-59659432 | None:intergenic | 30.0% | |
TTAACTCGGTATCATCAATT+TGG | + | chr4_1:59659414-59659433 | None:intergenic | 30.0% | |
AAAGGATTATGTGGTTAACT+CGG | + | chr4_1:59659428-59659447 | None:intergenic | 30.0% | |
GAGTCTTAAAAAGGATTATG+TGG | + | chr4_1:59659437-59659456 | None:intergenic | 30.0% | |
! | AAACAGGAAGAAAACTTTTG+AGG | - | chr4_1:59659487-59659506 | Msa0560360:intron | 30.0% |
!! | TAACATGCGTTCTAGAAATA+TGG | - | chr4_1:59659678-59659697 | Msa0560360:intron | 30.0% |
! | AAGAAGTTAAAGTGCTTGTT+GGG | + | chr4_1:59659714-59659733 | None:intergenic | 30.0% |
! | AAAGAAGTTAAAGTGCTTGT+TGG | + | chr4_1:59659715-59659734 | None:intergenic | 30.0% |
TTAAATGAATTTCTTCCCAG+AGG | - | chr4_1:59659924-59659943 | Msa0560360:intron | 30.0% | |
AAAGGATAGTAACCTGAAAA+GGG | + | chr4_1:59660063-59660082 | None:intergenic | 30.0% | |
AAAAGGATAGTAACCTGAAA+AGG | + | chr4_1:59660064-59660083 | None:intergenic | 30.0% | |
AATGTCATGGATAAATCTTC+AGG | - | chr4_1:59660301-59660320 | Msa0560360:intron | 30.0% | |
AAAAGAATTGGATGATACAG+GGG | + | chr4_1:59660344-59660363 | None:intergenic | 30.0% | |
GAAAAGAATTGGATGATACA+GGG | + | chr4_1:59660345-59660364 | None:intergenic | 30.0% | |
TGAACTTGATGGAAAAGAAT+TGG | + | chr4_1:59660356-59660375 | None:intergenic | 30.0% | |
TAGTGATATCTTTCGATTGA+GGG | - | chr4_1:59660441-59660460 | Msa0560360:intron | 30.0% | |
GATTGCACTTGAGATTTATT+GGG | - | chr4_1:59660556-59660575 | Msa0560360:intron | 30.0% | |
CAATGACTAACTTCATTGAA+AGG | + | chr4_1:59660613-59660632 | None:intergenic | 30.0% | |
CTTTCAATGAAGTTAGTCAT+TGG | - | chr4_1:59660611-59660630 | Msa0560360:intron | 30.0% | |
!!! | TTTTTTGAAAACTCGGAATC+CGG | - | chr4_1:59660708-59660727 | Msa0560360:CDS | 30.0% |
TGAATTTCAAAAACTGACGT+AGG | + | chr4_1:59661168-59661187 | None:intergenic | 30.0% | |
GATTAAAGAATTTGCATCAG+TGG | - | chr4_1:59661497-59661516 | Msa0560360:intron | 30.0% | |
! | TACATGACTTTTCACCTAAA+TGG | - | chr4_1:59661634-59661653 | Msa0560360:intron | 30.0% |
! | ACATGACTTTTCACCTAAAT+GGG | - | chr4_1:59661635-59661654 | Msa0560360:intron | 30.0% |
!! | TTATGCTGATTCAGAAATTG+AGG | - | chr4_1:59661659-59661678 | Msa0560360:intron | 30.0% |
!!! | TCTGTGGTTTGTTCTTTTAT+TGG | + | chr4_1:59661784-59661803 | None:intergenic | 30.0% |
GGTAACAATTTATTGTTCTG+TGG | + | chr4_1:59661800-59661819 | None:intergenic | 30.0% | |
! | TCTTTCAGATCAAGTTTTTG+AGG | - | chr4_1:59662353-59662372 | Msa0560360:intron | 30.0% |
!!! | TCAAGTTTTTGAGGTTGATA+TGG | - | chr4_1:59662362-59662381 | Msa0560360:intron | 30.0% |
AGATGGATATTTCAAAACAC+AGG | - | chr4_1:59662463-59662482 | Msa0560360:intron | 30.0% | |
! | TATTTCAAAACACAGGTTGA+AGG | - | chr4_1:59662470-59662489 | Msa0560360:intron | 30.0% |
AAAGTAACTGAAACTGGTAA+AGG | - | chr4_1:59662546-59662565 | Msa0560360:CDS | 30.0% | |
TTAACTCCAGAAGTTACAAT+TGG | + | chr4_1:59662648-59662667 | None:intergenic | 30.0% | |
!!! | TGCACTTTGCAACTATTTTT+TGG | - | chr4_1:59662770-59662789 | Msa0560360:intron | 30.0% |
TGATTGCTTATGAAACCATT+AGG | - | chr4_1:59662837-59662856 | Msa0560360:intron | 30.0% | |
GATTGCTTATGAAACCATTA+GGG | - | chr4_1:59662838-59662857 | Msa0560360:intron | 30.0% | |
ATTGCTTATGAAACCATTAG+GGG | - | chr4_1:59662839-59662858 | Msa0560360:intron | 30.0% | |
GATATGAAAATTCCATCCAT+TGG | - | chr4_1:59662861-59662880 | Msa0560360:intron | 30.0% | |
ATGGATGATGTGAATAAAGA+TGG | - | chr4_1:59663341-59663360 | Msa0560360:intron | 30.0% | |
ATGGCACAAAAGAAACTTTA+GGG | - | chr4_1:59663360-59663379 | Msa0560360:intron | 30.0% | |
TACTTGATGTATTCTATCAG+CGG | + | chr4_1:59663501-59663520 | None:intergenic | 30.0% | |
AGGACACAATCAATGATAAA+AGG | + | chr4_1:59663882-59663901 | None:intergenic | 30.0% | |
CTTGAAATCCATGATGTTAA+AGG | - | chr4_1:59663929-59663948 | Msa0560360:intron | 30.0% | |
! | AGAAGTACAAACCAATCATT+TGG | - | chr4_1:59663979-59663998 | Msa0560360:intron | 30.0% |
! | ACTATGATTTTCTCAAGGAA+GGG | - | chr4_1:59664129-59664148 | Msa0560360:intron | 30.0% |
! | TAGAAAATACCTTGGTTTGA+CGG | + | chr4_1:59664268-59664287 | None:intergenic | 30.0% |
AGACATGTTAGAAAATACCT+TGG | + | chr4_1:59664276-59664295 | None:intergenic | 30.0% | |
TAATGAGAGAAAGATCAACG+CGG | + | chr4_1:59655909-59655928 | None:intergenic | 35.0% | |
! | GGGTCAATGAAAATCAGTTT+TGG | - | chr4_1:59656463-59656482 | Msa0560360:intron | 35.0% |
AAATCCACAGAACCAAAGAA+AGG | + | chr4_1:59656688-59656707 | None:intergenic | 35.0% | |
TTTGCAATATGTGCTTGTAG+TGG | - | chr4_1:59656999-59657018 | Msa0560360:CDS | 35.0% | |
GAATTCCTAATATCTCTGCA+GGG | + | chr4_1:59657231-59657250 | None:intergenic | 35.0% | |
AGAATTCCTAATATCTCTGC+AGG | + | chr4_1:59657232-59657251 | None:intergenic | 35.0% | |
AGATAGGTAGAAACCATACT+TGG | + | chr4_1:59657304-59657323 | None:intergenic | 35.0% | |
AAGCAATTCTGACAGATGTA+TGG | + | chr4_1:59657365-59657384 | None:intergenic | 35.0% | |
ATGAATTGTCTGTAGCAGTT+GGG | - | chr4_1:59657411-59657430 | Msa0560360:intron | 35.0% | |
GAATTCAGCTGAATCTAAAC+AGG | + | chr4_1:59657501-59657520 | None:intergenic | 35.0% | |
TAAAGAATATGAGCACTTCG+AGG | - | chr4_1:59657609-59657628 | Msa0560360:intron | 35.0% | |
TTAGAAGGGATGGATACAAT+TGG | - | chr4_1:59657835-59657854 | Msa0560360:CDS | 35.0% | |
!!! | TTACTTCGGTTTTGATTCTG+TGG | - | chr4_1:59657922-59657941 | Msa0560360:CDS | 35.0% |
ATCTTTCAAACATAGGTGGA+AGG | - | chr4_1:59658063-59658082 | Msa0560360:CDS | 35.0% | |
! | ATTCCTGCAAGCAAATTTTC+AGG | - | chr4_1:59658350-59658369 | Msa0560360:intron | 35.0% |
! | AAACCTGAAAATTTGCTTGC+AGG | + | chr4_1:59658356-59658375 | None:intergenic | 35.0% |
! | TTTTTACTGCAGGGATATGA+TGG | - | chr4_1:59658447-59658466 | Msa0560360:intron | 35.0% |
TTACCTTAACATCCAAGTAG+TGG | + | chr4_1:59658486-59658505 | None:intergenic | 35.0% | |
! | TTCACACTTGTAATTTCTGG+TGG | - | chr4_1:59658525-59658544 | Msa0560360:intron | 35.0% |
ATACTTGGCTTACTTAAGTG+AGG | + | chr4_1:59658740-59658759 | None:intergenic | 35.0% | |
AATTTAACCTGTGAATGTGC+GGG | - | chr4_1:59658824-59658843 | Msa0560360:CDS | 35.0% | |
ATATTCGAATCCTATCCAAC+TGG | - | chr4_1:59658948-59658967 | Msa0560360:CDS | 35.0% | |
TAGTCAATAACCAGTTGGAT+AGG | + | chr4_1:59658961-59658980 | None:intergenic | 35.0% | |
TTGCTTAGTCAATAACCAGT+TGG | + | chr4_1:59658966-59658985 | None:intergenic | 35.0% | |
CTACTCAATGAATACAGAGA+CGG | + | chr4_1:59659085-59659104 | None:intergenic | 35.0% | |
!! | AAAAATTAGCATGGCGGATA+GGG | + | chr4_1:59659115-59659134 | None:intergenic | 35.0% |
TATTATCTTCCTACAAGGGA+AGG | - | chr4_1:59659362-59659381 | Msa0560360:intron | 35.0% | |
ATTATCTTCCTACAAGGGAA+GGG | - | chr4_1:59659363-59659382 | Msa0560360:intron | 35.0% | |
!! | TGGCCTTTAGAGTCTTAAAA+AGG | + | chr4_1:59659446-59659465 | None:intergenic | 35.0% |
! | TTATGGGTTGTTCATCTTTC+AGG | - | chr4_1:59659555-59659574 | Msa0560360:intron | 35.0% |
ATCTGTACTTATGCCTACAT+TGG | + | chr4_1:59659590-59659609 | None:intergenic | 35.0% | |
AGGCATAAGTACAGATACTA+AGG | - | chr4_1:59659594-59659613 | Msa0560360:intron | 35.0% | |
CATAAGTACAGATACTAAGG+AGG | - | chr4_1:59659597-59659616 | Msa0560360:intron | 35.0% | |
GTTACATCAGATTCCCAAAA+GGG | - | chr4_1:59659619-59659638 | Msa0560360:intron | 35.0% | |
!! | TTATGTGAAGATGCTGATTC+AGG | - | chr4_1:59659733-59659752 | Msa0560360:intron | 35.0% |
AACTGAGATATTCAAAGCCT+TGG | + | chr4_1:59659827-59659846 | None:intergenic | 35.0% | |
CTTTCATGAGTTGCATAATC+CGG | - | chr4_1:59659978-59659997 | Msa0560360:CDS | 35.0% | |
TTTCATGAGTTGCATAATCC+GGG | - | chr4_1:59659979-59659998 | Msa0560360:CDS | 35.0% | |
AAGGATAGTAACCTGAAAAG+GGG | + | chr4_1:59660062-59660081 | None:intergenic | 35.0% | |
GGTAAATCCAATTCAAACGA+GGG | - | chr4_1:59660247-59660266 | Msa0560360:intron | 35.0% | |
GGAAAAGAATTGGATGATAC+AGG | + | chr4_1:59660346-59660365 | None:intergenic | 35.0% | |
AAGACAGACATTGAACTTGA+TGG | + | chr4_1:59660367-59660386 | None:intergenic | 35.0% | |
CTAGTGATATCTTTCGATTG+AGG | - | chr4_1:59660440-59660459 | Msa0560360:intron | 35.0% | |
GGATTGCACTTGAGATTTAT+TGG | - | chr4_1:59660555-59660574 | Msa0560360:intron | 35.0% | |
!! | ATTTGCTCTGGCTTTAAATG+GGG | + | chr4_1:59660786-59660805 | None:intergenic | 35.0% |
!! | GATTTGCTCTGGCTTTAAAT+GGG | + | chr4_1:59660787-59660806 | None:intergenic | 35.0% |
!! | AGATTTGCTCTGGCTTTAAA+TGG | + | chr4_1:59660788-59660807 | None:intergenic | 35.0% |
! | ATCCATATAGAGATTTGCTC+TGG | + | chr4_1:59660798-59660817 | None:intergenic | 35.0% |
CAGGTCAGAAAAGATACATT+AGG | + | chr4_1:59661053-59661072 | None:intergenic | 35.0% | |
TGAACTATTGCCAAACATCT+TGG | - | chr4_1:59661084-59661103 | Msa0560360:intron | 35.0% | |
CTTTACTCAATCGTTAAGCA+TGG | - | chr4_1:59661278-59661297 | Msa0560360:intron | 35.0% | |
AATAGGTCAGGATCAATTTC+TGG | + | chr4_1:59661366-59661385 | None:intergenic | 35.0% | |
TGTGATAGATGATACCTCAT+TGG | - | chr4_1:59661578-59661597 | Msa0560360:intron | 35.0% | |
TAGGCAAGCATTTATTGTTC+TGG | + | chr4_1:59661738-59661757 | None:intergenic | 35.0% | |
AAGCAAACAGTGAAATCATC+AGG | + | chr4_1:59661966-59661985 | None:intergenic | 35.0% | |
!! | ACCATACAGGTGTTGATTAT+TGG | - | chr4_1:59662027-59662046 | Msa0560360:intron | 35.0% |
TCCAATAATCAACACCTGTA+TGG | + | chr4_1:59662031-59662050 | None:intergenic | 35.0% | |
ATTTGTGAATAGTAGACCAG+AGG | - | chr4_1:59662053-59662072 | Msa0560360:intron | 35.0% | |
TGTAATTGGTCCTGTATGTT+CGG | - | chr4_1:59662084-59662103 | Msa0560360:intron | 35.0% | |
CCATTAGCTAAAATTGTAGC+TGG | + | chr4_1:59662123-59662142 | None:intergenic | 35.0% | |
!!! | CCAGCTACAATTTTAGCTAA+TGG | - | chr4_1:59662120-59662139 | Msa0560360:intron | 35.0% |
TCAGGAATTTGAGTACAAAG+AGG | - | chr4_1:59662230-59662249 | Msa0560360:CDS | 35.0% | |
CAGGAATTTGAGTACAAAGA+GGG | - | chr4_1:59662231-59662250 | Msa0560360:CDS | 35.0% | |
! | TGAAGGCACATATCTTTCAT+AGG | - | chr4_1:59662487-59662506 | Msa0560360:CDS | 35.0% |
TATCTTTCATAGGCAGGTTA+AGG | - | chr4_1:59662497-59662516 | Msa0560360:CDS | 35.0% | |
CTTCACAAAGTAACTGAAAC+TGG | - | chr4_1:59662540-59662559 | Msa0560360:CDS | 35.0% | |
CTCATGTGTTTGGTAAAGAT+GGG | - | chr4_1:59662571-59662590 | Msa0560360:CDS | 35.0% | |
!! | AGAAGTTACAATTGGTGCTA+TGG | + | chr4_1:59662640-59662659 | None:intergenic | 35.0% |
ATAGCACCAATTGTAACTTC+TGG | - | chr4_1:59662639-59662658 | Msa0560360:intron | 35.0% | |
ATAAACTTCCGTGATGTGAA+TGG | - | chr4_1:59662669-59662688 | Msa0560360:intron | 35.0% | |
! | GGAATTTTCATATCCCCTAA+TGG | + | chr4_1:59662855-59662874 | None:intergenic | 35.0% |
TACATTGGTGTACTAAAGTC+AGG | - | chr4_1:59663006-59663025 | Msa0560360:intron | 35.0% | |
AATGCTCTTAATAACGCTGA+AGG | + | chr4_1:59663061-59663080 | None:intergenic | 35.0% | |
TTATATGCTCAGAGAGAGAA+CGG | - | chr4_1:59663151-59663170 | Msa0560360:CDS | 35.0% | |
GAAAACCTGAAATTCCTTTC+TGG | + | chr4_1:59663280-59663299 | None:intergenic | 35.0% | |
! | GTGGCTAGTTAATAATGACT+CGG | + | chr4_1:59663306-59663325 | None:intergenic | 35.0% |
GATGGCACAAAAGAAACTTT+AGG | - | chr4_1:59663359-59663378 | Msa0560360:intron | 35.0% | |
CAAATACAGAAAAAGTTCCG+TGG | - | chr4_1:59663674-59663693 | Msa0560360:intron | 35.0% | |
TCAAAGAGTTGTCAAAATCC+AGG | - | chr4_1:59663730-59663749 | Msa0560360:intron | 35.0% | |
AATCTAAGAAAAAGAGCAGC+TGG | + | chr4_1:59663761-59663780 | None:intergenic | 35.0% | |
! | ATGGATTTCAAGTCAGTAGA+AGG | + | chr4_1:59663921-59663940 | None:intergenic | 35.0% |
GTTTGTACTTCTTTCTTACC+TGG | + | chr4_1:59663971-59663990 | None:intergenic | 35.0% | |
TCCTGGAGAAGGTTATATTA+CGG | - | chr4_1:59664012-59664031 | Msa0560360:intron | 35.0% | |
TCGATCAGATGCCATTAATA+AGG | - | chr4_1:59664067-59664086 | Msa0560360:intron | 35.0% | |
! | ATCATAGTCATCCTCCTTTT+CGG | + | chr4_1:59664117-59664136 | None:intergenic | 35.0% |
! | GGATGACTATGATTTTCTCA+AGG | - | chr4_1:59664124-59664143 | Msa0560360:intron | 35.0% |
! | GACTATGATTTTCTCAAGGA+AGG | - | chr4_1:59664128-59664147 | Msa0560360:intron | 35.0% |
GAGTGAACAAAAGTTCCAAA+AGG | - | chr4_1:59664160-59664179 | Msa0560360:intron | 35.0% | |
CATGGACTTAACCCTTAAAA+GGG | + | chr4_1:59664186-59664205 | None:intergenic | 35.0% | |
TGATGACAACTTCTTACCTA+TGG | - | chr4_1:59664452-59664471 | Msa0560360:five_prime_UTR | 35.0% | |
TTTCCTCTCCTGTTAATAGA+CGG | - | chr4_1:59664506-59664525 | Msa0560360:five_prime_UTR | 35.0% | |
!!! | TCTTTTTTTGCTTGGATCGT+AGG | - | chr4_1:59664544-59664563 | Msa0560360:five_prime_UTR | 35.0% |
CATAGAAGAAAGAAGCTGAC+TGG | - | chr4_1:59655788-59655807 | Msa0560360:three_prime_UTR | 40.0% | |
GAAAAGGAAAGAACGAACGA+CGG | - | chr4_1:59655843-59655862 | Msa0560360:three_prime_UTR | 40.0% | |
AGATGTTAATGTGAGAGGCT+TGG | - | chr4_1:59656585-59656604 | Msa0560360:intron | 40.0% | |
!! | GTACTGATTTCGCCTTTCTT+TGG | - | chr4_1:59656673-59656692 | Msa0560360:CDS | 40.0% |
TTAGTTGGCGACAACTTTGA+AGG | - | chr4_1:59656868-59656887 | Msa0560360:CDS | 40.0% | |
GTGAATTGTGACTGTGTATG+TGG | - | chr4_1:59657105-59657124 | Msa0560360:CDS | 40.0% | |
TAGGTAGAAACCATACTTGG+TGG | + | chr4_1:59657301-59657320 | None:intergenic | 40.0% | |
CAACTGCTACAGACAATTCA+TGG | + | chr4_1:59657412-59657431 | None:intergenic | 40.0% | |
CATGAATTGTCTGTAGCAGT+TGG | - | chr4_1:59657410-59657429 | Msa0560360:intron | 40.0% | |
GCTGAATCTAAACAGGAAGA+CGG | + | chr4_1:59657494-59657513 | None:intergenic | 40.0% | |
GAAAACTCCACAGAATCACA+AGG | + | chr4_1:59657539-59657558 | None:intergenic | 40.0% | |
AATTGGCGAAAGAAGAACGA+TGG | - | chr4_1:59657852-59657871 | Msa0560360:CDS | 40.0% | |
GAACGATGGAAAAACTGTGA+AGG | - | chr4_1:59657866-59657885 | Msa0560360:CDS | 40.0% | |
ATTTCCAGAGGCGAAGTTAT+TGG | - | chr4_1:59658133-59658152 | Msa0560360:CDS | 40.0% | |
CAGTACATCAACATTCCACA+TGG | - | chr4_1:59658229-59658248 | Msa0560360:CDS | 40.0% | |
TGTCCACTACTTGGATGTTA+AGG | - | chr4_1:59658480-59658499 | Msa0560360:intron | 40.0% | |
! | TTTCCTGAAGCACTAAGCAA+AGG | - | chr4_1:59658764-59658783 | Msa0560360:CDS | 40.0% |
CAAAGGCAAGCATAGTAACT+TGG | - | chr4_1:59658781-59658800 | Msa0560360:CDS | 40.0% | |
CGTCTCTGTATTCATTGAGT+AGG | - | chr4_1:59659083-59659102 | Msa0560360:CDS | 40.0% | |
!! | CAAAAATTAGCATGGCGGAT+AGG | + | chr4_1:59659116-59659135 | None:intergenic | 40.0% |
! | ATCCGCCATGCTAATTTTTG+TGG | - | chr4_1:59659116-59659135 | Msa0560360:CDS | 40.0% |
AGCCACAAAAATTAGCATGG+CGG | + | chr4_1:59659121-59659140 | None:intergenic | 40.0% | |
GGTAGCCACAAAAATTAGCA+TGG | + | chr4_1:59659124-59659143 | None:intergenic | 40.0% | |
CACAAGATAACAATGGGCAA+TGG | + | chr4_1:59659155-59659174 | None:intergenic | 40.0% | |
TGTAAGAGATGAGTGATGAG+AGG | + | chr4_1:59659274-59659293 | None:intergenic | 40.0% | |
TGTAAGAGATGAGTGATGAG+AGG | + | chr4_1:59659274-59659293 | None:intergenic | 40.0% | |
CAGGTTAACAAGACCAATGT+AGG | - | chr4_1:59659574-59659593 | Msa0560360:intron | 40.0% | |
GGTTACATCAGATTCCCAAA+AGG | - | chr4_1:59659618-59659637 | Msa0560360:intron | 40.0% | |
! | TGACATAGAACTGCCCTTTT+GGG | + | chr4_1:59659635-59659654 | None:intergenic | 40.0% |
! | ATGACATAGAACTGCCCTTT+TGG | + | chr4_1:59659636-59659655 | None:intergenic | 40.0% |
!! | TCTGGCTTTCCTGCAAATTA+CGG | - | chr4_1:59659655-59659674 | Msa0560360:intron | 40.0% |
! | TTGCTTGGTGAATATCCTCT+GGG | + | chr4_1:59659942-59659961 | None:intergenic | 40.0% |
CGGATTATGCAACTCATGAA+AGG | + | chr4_1:59659980-59659999 | None:intergenic | 40.0% | |
! | GAAAAGGGGTGCATAAGATA+TGG | + | chr4_1:59660048-59660067 | None:intergenic | 40.0% |
! | TATCTTATGCACCCCTTTTC+AGG | - | chr4_1:59660048-59660067 | Msa0560360:CDS | 40.0% |
!! | TGTTGTGGCCTATTGATTTC+AGG | - | chr4_1:59660196-59660215 | Msa0560360:intron | 40.0% |
AAATTACCTCCCACTTGTTC+AGG | - | chr4_1:59660222-59660241 | Msa0560360:intron | 40.0% | |
AATTACCTCCCACTTGTTCA+GGG | - | chr4_1:59660223-59660242 | Msa0560360:intron | 40.0% | |
GGGTAAATCCAATTCAAACG+AGG | - | chr4_1:59660246-59660265 | Msa0560360:intron | 40.0% | |
TTTATCCATGACATTGTCCC+AGG | + | chr4_1:59660296-59660315 | None:intergenic | 40.0% | |
TCAATGTCTGTCTTCAACGA+AGG | - | chr4_1:59660373-59660392 | Msa0560360:CDS | 40.0% | |
CACAGTCTCTGCAATCAAAT+TGG | - | chr4_1:59660404-59660423 | Msa0560360:CDS | 40.0% | |
! | TCCATGACTGATTAGTCCAA+GGG | - | chr4_1:59660731-59660750 | Msa0560360:CDS | 40.0% |
!! | TTTGCTCTGGCTTTAAATGG+GGG | + | chr4_1:59660785-59660804 | None:intergenic | 40.0% |
AGCCAGAGCAAATCTCTATA+TGG | - | chr4_1:59660793-59660812 | Msa0560360:intron | 40.0% | |
!! | ATGGATTAGCCCACTGAAAT+CGG | - | chr4_1:59660812-59660831 | Msa0560360:intron | 40.0% |
CTGATATAACCAACTTGGGT+TGG | + | chr4_1:59660907-59660926 | None:intergenic | 40.0% | |
CTATTGCCAAACATCTTGGT+AGG | - | chr4_1:59661088-59661107 | Msa0560360:intron | 40.0% | |
! | CATTTTCTTCGAAAGGGTTC+TGG | + | chr4_1:59661236-59661255 | None:intergenic | 40.0% |
GAACCCTTTCGAAGAAAATG+CGG | - | chr4_1:59661236-59661255 | Msa0560360:intron | 40.0% | |
AACCCTTTCGAAGAAAATGC+GGG | - | chr4_1:59661237-59661256 | Msa0560360:intron | 40.0% | |
TAACTATTCCGCTGAACTAC+TGG | - | chr4_1:59661311-59661330 | Msa0560360:intron | 40.0% | |
AACTATTCCGCTGAACTACT+GGG | - | chr4_1:59661312-59661331 | Msa0560360:intron | 40.0% | |
TGTGCATCAAAACTTGCACA+CGG | - | chr4_1:59661416-59661435 | Msa0560360:intron | 40.0% | |
AGGTTGACAGCTTCTCTAAA+TGG | - | chr4_1:59661475-59661494 | Msa0560360:intron | 40.0% | |
AGTCTTCCCCTGATATTTCA+TGG | - | chr4_1:59661535-59661554 | Msa0560360:intron | 40.0% | |
GTCTTCCCCTGATATTTCAT+GGG | - | chr4_1:59661536-59661555 | Msa0560360:intron | 40.0% | |
TCTTCCCCTGATATTTCATG+GGG | - | chr4_1:59661537-59661556 | Msa0560360:intron | 40.0% | |
AGTCATGTATGCTAAACAGC+TGG | + | chr4_1:59661623-59661642 | None:intergenic | 40.0% | |
GAATCAGCATAAGCCCATTT+AGG | + | chr4_1:59661651-59661670 | None:intergenic | 40.0% | |
CAATTACACATTGTCACCTC+TGG | + | chr4_1:59662072-59662091 | None:intergenic | 40.0% | |
CAGAGGTGACAATGTGTAAT+TGG | - | chr4_1:59662070-59662089 | Msa0560360:intron | 40.0% | |
GTAATTGGTCCTGTATGTTC+GGG | - | chr4_1:59662085-59662104 | Msa0560360:intron | 40.0% | |
TAATTGGTCCTGTATGTTCG+GGG | - | chr4_1:59662086-59662105 | Msa0560360:intron | 40.0% | |
TTCGAGAAGGTTACGTAGAA+AGG | + | chr4_1:59662189-59662208 | None:intergenic | 40.0% | |
GCAAGCAAATCTATTCGAGA+AGG | + | chr4_1:59662202-59662221 | None:intergenic | 40.0% | |
ATTTGCTTGCAGTGAAGTTC+AGG | - | chr4_1:59662212-59662231 | Msa0560360:intron | 40.0% | |
AATGCGACATCATTTGCAAC+TGG | - | chr4_1:59662302-59662321 | Msa0560360:intron | 40.0% | |
ACTGGAGGAGTTACTTACTT+TGG | - | chr4_1:59662320-59662339 | Msa0560360:intron | 40.0% | |
GAAATATCCATCTCTCCAGT+TGG | + | chr4_1:59662456-59662475 | None:intergenic | 40.0% | |
TTAAGGAGAAGCTGTACTCA+TGG | - | chr4_1:59662514-59662533 | Msa0560360:CDS | 40.0% | |
CCATCTTTACCAAACACATG+AGG | + | chr4_1:59662573-59662592 | None:intergenic | 40.0% | |
CCTCATGTGTTTGGTAAAGA+TGG | - | chr4_1:59662570-59662589 | Msa0560360:CDS | 40.0% | |
CTACATTTAGTTGCTGCTCT+TGG | - | chr4_1:59662603-59662622 | Msa0560360:intron | 40.0% | |
TTGCTGCTCTTGGTTATGAT+TGG | - | chr4_1:59662613-59662632 | Msa0560360:intron | 40.0% | |
TGCTGCTCTTGGTTATGATT+GGG | - | chr4_1:59662614-59662633 | Msa0560360:intron | 40.0% | |
TTAACAAACACGCCAATGGA+TGG | + | chr4_1:59662876-59662895 | None:intergenic | 40.0% | |
GTGATTAACAAACACGCCAA+TGG | + | chr4_1:59662880-59662899 | None:intergenic | 40.0% | |
TCACATGCATGAAAAAGCCA+CGG | + | chr4_1:59662953-59662972 | None:intergenic | 40.0% | |
AATAACGCTGAAGGCTTCAT+AGG | + | chr4_1:59663052-59663071 | None:intergenic | 40.0% | |
CATCCATTGTGAGTGATTCA+AGG | + | chr4_1:59663328-59663347 | None:intergenic | 40.0% | |
TCCTTAAGGCATATAGCATC+TGG | + | chr4_1:59663446-59663465 | None:intergenic | 40.0% | |
CAGCATCAAGAGAATCCTTA+AGG | + | chr4_1:59663460-59663479 | None:intergenic | 40.0% | |
TCAGTATGAAGAGGATGATG+AGG | - | chr4_1:59663556-59663575 | Msa0560360:intron | 40.0% | |
GCTTCTAAGTCATCCAAATC+TGG | - | chr4_1:59663617-59663636 | Msa0560360:intron | 40.0% | |
AAGTCATCCAAATCTGGACA+TGG | - | chr4_1:59663623-59663642 | Msa0560360:intron | 40.0% | |
AGTCATCCAAATCTGGACAT+GGG | - | chr4_1:59663624-59663643 | Msa0560360:intron | 40.0% | |
TATTTGTACTGCAGCAGCAT+TGG | + | chr4_1:59663660-59663679 | None:intergenic | 40.0% | |
TACATGGGCCTTTAACATCA+TGG | + | chr4_1:59663940-59663959 | None:intergenic | 40.0% | |
ATGTTAAAGGCCCATGTAAG+AGG | - | chr4_1:59663942-59663961 | Msa0560360:intron | 40.0% | |
AAACCAATCATTTGGTCCGT+GGG | - | chr4_1:59663987-59664006 | Msa0560360:intron | 40.0% | |
ACCGTAATATAACCTTCTCC+AGG | + | chr4_1:59664016-59664035 | None:intergenic | 40.0% | |
TGGAGAAGGTTATATTACGG+TGG | - | chr4_1:59664015-59664034 | Msa0560360:intron | 40.0% | |
AGAAGGTTATATTACGGTGG+AGG | - | chr4_1:59664018-59664037 | Msa0560360:intron | 40.0% | |
! | TCATAGTCATCCTCCTTTTC+GGG | + | chr4_1:59664116-59664135 | None:intergenic | 40.0% |
! | ATGATTTTCTCAAGGAAGGG+AGG | - | chr4_1:59664132-59664151 | Msa0560360:intron | 40.0% |
! | AGTTCCAAAAGGCCCTTTTA+AGG | - | chr4_1:59664171-59664190 | Msa0560360:intron | 40.0% |
! | GTTCCAAAAGGCCCTTTTAA+GGG | - | chr4_1:59664172-59664191 | Msa0560360:intron | 40.0% |
! | TAACCCTTAAAAGGGCCTTT+TGG | + | chr4_1:59664178-59664197 | None:intergenic | 40.0% |
CCATGGACTTAACCCTTAAA+AGG | + | chr4_1:59664187-59664206 | None:intergenic | 40.0% | |
!! | CCTTTTAAGGGTTAAGTCCA+TGG | - | chr4_1:59664184-59664203 | Msa0560360:intron | 40.0% |
ATTTAGCAGACGCCTGTATT+GGG | + | chr4_1:59664231-59664250 | None:intergenic | 40.0% | |
GAGTTCGATAAATTCGGAAG+AGG | - | chr4_1:59664383-59664402 | Msa0560360:intron | 40.0% | |
AAGGATCAATCGAATGCCAT+AGG | + | chr4_1:59664471-59664490 | None:intergenic | 40.0% | |
! | TTTTTGCTTGGATCGTAGGT+TGG | - | chr4_1:59664548-59664567 | Msa0560360:five_prime_UTR | 40.0% |
! | TTTTGCTTGGATCGTAGGTT+GGG | - | chr4_1:59664549-59664568 | Msa0560360:five_prime_UTR | 40.0% |
GAGAAAGATCAACGCGGAAA+GGG | + | chr4_1:59655903-59655922 | None:intergenic | 45.0% | |
AGAGAAAGATCAACGCGGAA+AGG | + | chr4_1:59655904-59655923 | None:intergenic | 45.0% | |
CCTAATCGAAGAGCCATTTC+AGG | + | chr4_1:59655978-59655997 | None:intergenic | 45.0% | |
CCTGAAATGGCTCTTCGATT+AGG | - | chr4_1:59655975-59655994 | Msa0560360:CDS | 45.0% | |
!! | TTCGCCTTTCTTTGGTTCTG+TGG | - | chr4_1:59656681-59656700 | Msa0560360:CDS | 45.0% |
! | AGTTTGAAGCACAGCATCGA+TGG | - | chr4_1:59657200-59657219 | Msa0560360:CDS | 45.0% |
TTACGCCCTGCAGAGATATT+AGG | - | chr4_1:59657223-59657242 | Msa0560360:intron | 45.0% | |
! | TAGAAACCATACTTGGTGGC+CGG | + | chr4_1:59657297-59657316 | None:intergenic | 45.0% |
CTGCTACAGACAATTCATGG+AGG | + | chr4_1:59657409-59657428 | None:intergenic | 45.0% | |
TTGGCATCTAGAAGGTTGTC+AGG | + | chr4_1:59657452-59657471 | None:intergenic | 45.0% | |
AACCTTCTAGATGCCAAACG+TGG | - | chr4_1:59657455-59657474 | Msa0560360:intron | 45.0% | |
! | TTGAGGCACTTTAGAAGGGA+TGG | - | chr4_1:59657825-59657844 | Msa0560360:CDS | 45.0% |
GGAAGCTCATGAGAAGTTGA+AGG | - | chr4_1:59657887-59657906 | Msa0560360:CDS | 45.0% | |
TTTGCATGAGAGAGACACAC+AGG | - | chr4_1:59657956-59657975 | Msa0560360:CDS | 45.0% | |
GCTTACTTAAGTGAGGTGTG+AGG | + | chr4_1:59658733-59658752 | None:intergenic | 45.0% | |
TTGCCTTTGCTTAGTGCTTC+AGG | + | chr4_1:59658770-59658789 | None:intergenic | 45.0% | |
CAATGGGCAATGGATCCAAT+TGG | + | chr4_1:59659145-59659164 | None:intergenic | 45.0% | |
AATAGAGTCCCTTCCCTTGT+AGG | + | chr4_1:59659374-59659393 | None:intergenic | 45.0% | |
AAGGGCAGTTCTATGTCATC+TGG | - | chr4_1:59659637-59659656 | Msa0560360:intron | 45.0% | |
! | CGCATGTTACCGTAATTTGC+AGG | + | chr4_1:59659667-59659686 | None:intergenic | 45.0% |
! | TAAAGTGCTTGTTGGGCTCA+TGG | + | chr4_1:59659707-59659726 | None:intergenic | 45.0% |
! | CTTGCTTGGTGAATATCCTC+TGG | + | chr4_1:59659943-59659962 | None:intergenic | 45.0% |
GAGTTGCATAATCCGGGAAA+TGG | - | chr4_1:59659985-59660004 | Msa0560360:CDS | 45.0% | |
GCATCAATCTTATCCGTCTG+TGG | + | chr4_1:59660012-59660031 | None:intergenic | 45.0% | |
GCGATGTCTCAAGTCATTCT+AGG | - | chr4_1:59660156-59660175 | Msa0560360:intron | 45.0% | |
ATTACCTCCCACTTGTTCAG+GGG | - | chr4_1:59660224-59660243 | Msa0560360:intron | 45.0% | |
ATTTACCCCCCTGAACAAGT+GGG | + | chr4_1:59660234-59660253 | None:intergenic | 45.0% | |
TCTCTGACCCTCGTTTGAAT+TGG | + | chr4_1:59660257-59660276 | None:intergenic | 45.0% | |
!! | GTCAGAGAGCACTCAACATA+GGG | - | chr4_1:59660269-59660288 | Msa0560360:intron | 45.0% |
GAATTGGATGATACAGGGGA+AGG | + | chr4_1:59660340-59660359 | None:intergenic | 45.0% | |
TCTGTCTTCAACGAAGGAAG+TGG | - | chr4_1:59660379-59660398 | Msa0560360:CDS | 45.0% | |
GTCTCTGCAATCAAATTGGC+AGG | - | chr4_1:59660408-59660427 | Msa0560360:CDS | 45.0% | |
GTTGAAGTAGCCTGGGAATA+TGG | - | chr4_1:59660581-59660600 | Msa0560360:intron | 45.0% | |
!! | AAGGGAGTATCCATATTCCC+AGG | + | chr4_1:59660594-59660613 | None:intergenic | 45.0% |
TGGACTAATCAGTCATGGAC+CGG | + | chr4_1:59660730-59660749 | None:intergenic | 45.0% | |
! | GTCCATGACTGATTAGTCCA+AGG | - | chr4_1:59660730-59660749 | Msa0560360:CDS | 45.0% |
! | TTTGGAGTATGCTCCTCTCA+AGG | + | chr4_1:59660861-59660880 | None:intergenic | 45.0% |
! | TTGAGAGGAGCATACTCCAA+AGG | - | chr4_1:59660860-59660879 | Msa0560360:intron | 45.0% |
ATAGTTCACGCTCAGTCAAC+AGG | + | chr4_1:59661072-59661091 | None:intergenic | 45.0% | |
CCAAACATCTTGGTAGGAGT+GGG | - | chr4_1:59661094-59661113 | Msa0560360:intron | 45.0% | |
CAAACATCTTGGTAGGAGTG+GGG | - | chr4_1:59661095-59661114 | Msa0560360:intron | 45.0% | |
AAACATCTTGGTAGGAGTGG+GGG | - | chr4_1:59661096-59661115 | Msa0560360:intron | 45.0% | |
CTGGGTTTGGGTAAAGAAAC+TGG | - | chr4_1:59661330-59661349 | Msa0560360:intron | 45.0% | |
! | TGATGCACAGACTGCTCTTT+TGG | + | chr4_1:59661405-59661424 | None:intergenic | 45.0% |
TGTGCCCCATGAAATATCAG+GGG | + | chr4_1:59661544-59661563 | None:intergenic | 45.0% | |
CTGTGCCCCATGAAATATCA+GGG | + | chr4_1:59661545-59661564 | None:intergenic | 45.0% | |
TCTGTGCCCCATGAAATATC+AGG | + | chr4_1:59661546-59661565 | None:intergenic | 45.0% | |
AGATTGAGACAGGTCCAATG+AGG | + | chr4_1:59661595-59661614 | None:intergenic | 45.0% | |
TCGAGTAATGAAGAGCCAAC+TGG | - | chr4_1:59662438-59662457 | Msa0560360:intron | 45.0% | |
GGCACATATCTTTCATAGGC+AGG | - | chr4_1:59662491-59662510 | Msa0560360:CDS | 45.0% | |
GGTAAAGGACCTCATGTGTT+TGG | - | chr4_1:59662561-59662580 | Msa0560360:CDS | 45.0% | |
GTGTTTGGTAAAGATGGGCA+AGG | - | chr4_1:59662576-59662595 | Msa0560360:intron | 45.0% | |
ACTTCCGTGATGTGAATGGA+TGG | - | chr4_1:59662673-59662692 | Msa0560360:intron | 45.0% | |
! | TTTTGATGCCTAGTTCACCG+TGG | - | chr4_1:59662933-59662952 | Msa0560360:intron | 45.0% |
TGAAAAAGCCACGGTGAACT+AGG | + | chr4_1:59662944-59662963 | None:intergenic | 45.0% | |
GATGGCCAGAAAGGAATTTC+AGG | - | chr4_1:59663272-59663291 | Msa0560360:intron | 45.0% | |
CCATTGTGAGTGATTCAAGG+TGG | + | chr4_1:59663325-59663344 | None:intergenic | 45.0% | |
CCACCTTGAATCACTCACAA+TGG | - | chr4_1:59663322-59663341 | Msa0560360:intron | 45.0% | |
GCCAGATGCTATATGCCTTA+AGG | - | chr4_1:59663442-59663461 | Msa0560360:intron | 45.0% | |
GAAGAGGATGATGAGGAGTT+TGG | - | chr4_1:59663563-59663582 | Msa0560360:intron | 45.0% | |
GTCATCCAAATCTGGACATG+GGG | - | chr4_1:59663625-59663644 | Msa0560360:intron | 45.0% | |
TACAGAAAAAGTTCCGTGGC+TGG | - | chr4_1:59663678-59663697 | Msa0560360:intron | 45.0% | |
! | CTTTTCTCTTTGTCCAGCCA+CGG | + | chr4_1:59663694-59663713 | None:intergenic | 45.0% |
TACCTGGTGACCTCTTACAT+GGG | + | chr4_1:59663955-59663974 | None:intergenic | 45.0% | |
TTACCTGGTGACCTCTTACA+TGG | + | chr4_1:59663956-59663975 | None:intergenic | 45.0% | |
CAAACCAATCATTTGGTCCG+TGG | - | chr4_1:59663986-59664005 | Msa0560360:intron | 45.0% | |
ATTCCCACGGACCAAATGAT+TGG | + | chr4_1:59663993-59664012 | None:intergenic | 45.0% | |
! | TATATTACGGTGGAGGCGTA+AGG | - | chr4_1:59664025-59664044 | Msa0560360:intron | 45.0% |
! | ATATTACGGTGGAGGCGTAA+GGG | - | chr4_1:59664026-59664045 | Msa0560360:intron | 45.0% |
TTGGTCGGGGACCTTATTAA+TGG | + | chr4_1:59664081-59664100 | None:intergenic | 45.0% | |
AGCTTCTGGATACTGAACCA+TGG | + | chr4_1:59664204-59664223 | None:intergenic | 45.0% | |
TGGTTCAGTATCCAGAAGCT+CGG | - | chr4_1:59664204-59664223 | Msa0560360:intron | 45.0% | |
CATTTAGCAGACGCCTGTAT+TGG | + | chr4_1:59664232-59664251 | None:intergenic | 45.0% | |
GGCATTCGATTGATCCTTTG+CGG | - | chr4_1:59664473-59664492 | Msa0560360:five_prime_UTR | 45.0% | |
ATTCGATTGATCCTTTGCGG+TGG | - | chr4_1:59664476-59664495 | Msa0560360:five_prime_UTR | 45.0% | |
!! | ATTAGTATTAAATAAATAAA+AGG | + | chr4_1:59659010-59659029 | None:intergenic | 5.0% |
AAGGAAAGAACGAACGACGG+TGG | - | chr4_1:59655846-59655865 | Msa0560360:three_prime_UTR | 50.0% | |
AAAGATCAACGCGGAAAGGG+AGG | + | chr4_1:59655900-59655919 | None:intergenic | 50.0% | |
! | GGAGCGTTCTTCTCCTGAAA+TGG | - | chr4_1:59655962-59655981 | Msa0560360:CDS | 50.0% |
TCTCAAAAGAACCGCCTACC+CGG | - | chr4_1:59657275-59657294 | Msa0560360:intron | 50.0% | |
! | AGAAACCATACTTGGTGGCC+GGG | + | chr4_1:59657296-59657315 | None:intergenic | 50.0% |
CTCCACGTTTGGCATCTAGA+AGG | + | chr4_1:59657460-59657479 | None:intergenic | 50.0% | |
TAGATGCCAAACGTGGAGAC+TGG | - | chr4_1:59657462-59657481 | Msa0560360:intron | 50.0% | |
CCAATTCCAGTCTCCACGTT+TGG | + | chr4_1:59657471-59657490 | None:intergenic | 50.0% | |
CCAAACGTGGAGACTGGAAT+TGG | - | chr4_1:59657468-59657487 | Msa0560360:intron | 50.0% | |
! | GTTGGCTCCTTGTGATTCTG+TGG | - | chr4_1:59657529-59657548 | Msa0560360:intron | 50.0% |
ATACACTGCTACTACGCCCA+TGG | - | chr4_1:59658096-59658115 | Msa0560360:CDS | 50.0% | |
TCCAGAGGCGAAGTTATTGG+AGG | - | chr4_1:59658136-59658155 | Msa0560360:CDS | 50.0% | |
ACTAGATCCCGCACATTCAC+AGG | + | chr4_1:59658834-59658853 | None:intergenic | 50.0% | |
GATGAGTGATGAGAGGAGTG+AGG | + | chr4_1:59659267-59659286 | None:intergenic | 50.0% | |
! | TGCGAAACACTGAGCTTGCT+TGG | + | chr4_1:59659957-59659976 | None:intergenic | 50.0% |
TTACCTCCCACTTGTTCAGG+GGG | - | chr4_1:59660225-59660244 | Msa0560360:intron | 50.0% | |
GATTTACCCCCCTGAACAAG+TGG | + | chr4_1:59660235-59660254 | None:intergenic | 50.0% | |
!! | GGTCAGAGAGCACTCAACAT+AGG | - | chr4_1:59660268-59660287 | Msa0560360:intron | 50.0% |
AGCACTCAACATAGGGTCCT+GGG | - | chr4_1:59660276-59660295 | Msa0560360:intron | 50.0% | |
GGATGATACAGGGGAAGGTT+CGG | + | chr4_1:59660335-59660354 | None:intergenic | 50.0% | |
ATTGGGCTGTTGAAGTAGCC+TGG | - | chr4_1:59660573-59660592 | Msa0560360:intron | 50.0% | |
TTGGGCTGTTGAAGTAGCCT+GGG | - | chr4_1:59660574-59660593 | Msa0560360:intron | 50.0% | |
GCCCTTGGACTAATCAGTCA+TGG | + | chr4_1:59660735-59660754 | None:intergenic | 50.0% | |
ATCGAACCTGAGACCTTGAG+AGG | - | chr4_1:59660845-59660864 | Msa0560360:intron | 50.0% | |
TATGCTCCTCTCAAGGTCTC+AGG | + | chr4_1:59660854-59660873 | None:intergenic | 50.0% | |
!! | ATAACCAACTTGGGTTGGCC+TGG | + | chr4_1:59660902-59660921 | None:intergenic | 50.0% |
GCCAAACATCTTGGTAGGAG+TGG | - | chr4_1:59661093-59661112 | Msa0560360:intron | 50.0% | |
CCCACTCCTACCAAGATGTT+TGG | + | chr4_1:59661097-59661116 | None:intergenic | 50.0% | |
! | CGCCCGCATTTTCTTCGAAA+GGG | + | chr4_1:59661242-59661261 | None:intergenic | 50.0% |
CCTTTCGAAGAAAATGCGGG+CGG | - | chr4_1:59661240-59661259 | Msa0560360:intron | 50.0% | |
! | ATGCGGGCGGATTTCCAAAA+TGG | - | chr4_1:59661253-59661272 | Msa0560360:intron | 50.0% |
TTCCGCTGAACTACTGGGTT+TGG | - | chr4_1:59661317-59661336 | Msa0560360:intron | 50.0% | |
TCCGCTGAACTACTGGGTTT+GGG | - | chr4_1:59661318-59661337 | Msa0560360:intron | 50.0% | |
ACCCAAACCCAGTAGTTCAG+CGG | + | chr4_1:59661322-59661341 | None:intergenic | 50.0% | |
TGCTAAAGAGAGCCTGACGA+AGG | - | chr4_1:59661455-59661474 | Msa0560360:intron | 50.0% | |
AGAAGCTGTCAACCTTCGTC+AGG | + | chr4_1:59661470-59661489 | None:intergenic | 50.0% | |
TCATGGGGCACAGATGAATG+TGG | - | chr4_1:59661552-59661571 | Msa0560360:intron | 50.0% | |
!! | GCTGGTCTTGAGATTGAGAC+AGG | + | chr4_1:59661605-59661624 | None:intergenic | 50.0% |
TTCCACTTCCCCGAACATAC+AGG | + | chr4_1:59662097-59662116 | None:intergenic | 50.0% | |
CAAGCTCCACCTCATGAGAT+TGG | - | chr4_1:59662156-59662175 | Msa0560360:intron | 50.0% | |
CTCCACCTCATGAGATTGGA+CGG | - | chr4_1:59662160-59662179 | Msa0560360:intron | 50.0% | |
TCCACCTCATGAGATTGGAC+GGG | - | chr4_1:59662161-59662180 | Msa0560360:intron | 50.0% | |
GCGACATCATTTGCAACTGG+AGG | - | chr4_1:59662305-59662324 | Msa0560360:intron | 50.0% | |
TGAAGAGCCAACTGGAGAGA+TGG | - | chr4_1:59662446-59662465 | Msa0560360:intron | 50.0% | |
CCGTCCATCCATTCACATCA+CGG | + | chr4_1:59662680-59662699 | None:intergenic | 50.0% | |
CCGTGATGTGAATGGATGGA+CGG | - | chr4_1:59662677-59662696 | Msa0560360:intron | 50.0% | |
GTTGCTCTCCTTGTCTCCAT+GGG | - | chr4_1:59663173-59663192 | Msa0560360:CDS | 50.0% | |
GTTCTTCCTGAAGGGAATGC+TGG | + | chr4_1:59663230-59663249 | None:intergenic | 50.0% | |
CTGCAGGTGTTCTTCCTGAA+GGG | + | chr4_1:59663238-59663257 | None:intergenic | 50.0% | |
TCTGCAGGTGTTCTTCCTGA+AGG | + | chr4_1:59663239-59663258 | None:intergenic | 50.0% | |
ACACCTGCAGATCTTGCTTC+TGG | - | chr4_1:59663248-59663267 | Msa0560360:intron | 50.0% | |
AATTGCAACGCCTGTGCACT+GGG | - | chr4_1:59663412-59663431 | Msa0560360:intron | 50.0% | |
CAGCGGCTTGTGTAGCATTA+CGG | + | chr4_1:59663484-59663503 | None:intergenic | 50.0% | |
GCAGCTAGCTCAGTATGAAG+AGG | - | chr4_1:59663547-59663566 | Msa0560360:intron | 50.0% | |
ATCCAAATCTGGACATGGGG+AGG | - | chr4_1:59663628-59663647 | Msa0560360:intron | 50.0% | |
TCCAAATCTGGACATGGGGA+GGG | - | chr4_1:59663629-59663648 | Msa0560360:intron | 50.0% | |
AAAGAGCAGCTGGATGAACC+TGG | + | chr4_1:59663751-59663770 | None:intergenic | 50.0% | |
TCCAGCCCAATTGCCATAGA+AGG | - | chr4_1:59663810-59663829 | Msa0560360:intron | 50.0% | |
CCCAGCCTTCTATGGCAATT+GGG | + | chr4_1:59663818-59663837 | None:intergenic | 50.0% | |
CCCAATTGCCATAGAAGGCT+GGG | - | chr4_1:59663815-59663834 | Msa0560360:intron | 50.0% | |
CCAATTGCCATAGAAGGCTG+GGG | - | chr4_1:59663816-59663835 | Msa0560360:intron | 50.0% | |
AACCTTCTCCAGGATTCCCA+CGG | + | chr4_1:59664006-59664025 | None:intergenic | 50.0% | |
!! | AGTCATCCTCCTTTTCGGGA+AGG | + | chr4_1:59664112-59664131 | None:intergenic | 50.0% |
GGTTCAGTATCCAGAAGCTC+GGG | - | chr4_1:59664205-59664224 | Msa0560360:intron | 50.0% | |
CAGGCGTCTGCTAAATGTAG+TGG | - | chr4_1:59664235-59664254 | Msa0560360:intron | 50.0% | |
GGACGATTACCGTCAAACCA+AGG | - | chr4_1:59664256-59664275 | Msa0560360:intron | 50.0% | |
AATTCGGAAGAGGCAGCTGA+TGG | - | chr4_1:59664393-59664412 | Msa0560360:CDS | 50.0% | |
! | AGCTGATGGTGTGGAGGATT+TGG | - | chr4_1:59664407-59664426 | Msa0560360:CDS | 50.0% |
GAAAGAAGTAGCCACCGCAA+AGG | + | chr4_1:59664490-59664509 | None:intergenic | 50.0% | |
GCCTCCAATAACTTCGCCTC+TGG | + | chr4_1:59658140-59658159 | None:intergenic | 55.0% | |
TCCGGGAAATGGTCCACAGA+CGG | - | chr4_1:59659996-59660015 | Msa0560360:CDS | 55.0% | |
TCCGTCTGTGGACCATTTCC+CGG | + | chr4_1:59660000-59660019 | None:intergenic | 55.0% | |
TACCTCCCACTTGTTCAGGG+GGG | - | chr4_1:59660226-59660245 | Msa0560360:intron | 55.0% | |
GAGCACTCAACATAGGGTCC+TGG | - | chr4_1:59660275-59660294 | Msa0560360:intron | 55.0% | |
AGGGTCCTGGGACAATGTCA+TGG | - | chr4_1:59660288-59660307 | Msa0560360:intron | 55.0% | |
TACTTCCGCCGTCCACATCT+GGG | - | chr4_1:59660758-59660777 | Msa0560360:CDS | 55.0% | |
TTAAATGGGGGCCCCAGATG+TGG | + | chr4_1:59660773-59660792 | None:intergenic | 55.0% | |
TAGCCCACTGAAATCGGCAC+CGG | - | chr4_1:59660818-59660837 | Msa0560360:intron | 55.0% | |
GGTCTCAGGTTCGATTCACC+CGG | + | chr4_1:59660840-59660859 | None:intergenic | 55.0% | |
!! | TGGTGTTGGCTTGGGACCTT+TGG | + | chr4_1:59660879-59660898 | None:intergenic | 55.0% |
! | CCGCCCGCATTTTCTTCGAA+AGG | + | chr4_1:59661243-59661262 | None:intergenic | 55.0% |
GTCCTGTATGTTCGGGGAAG+TGG | - | chr4_1:59662092-59662111 | Msa0560360:intron | 55.0% | |
ACCCGTCCAATCTCATGAGG+TGG | + | chr4_1:59662165-59662184 | None:intergenic | 55.0% | |
GGAACCCGTCCAATCTCATG+AGG | + | chr4_1:59662168-59662187 | None:intergenic | 55.0% | |
ATGGATGGACGGCTCTACAC+TGG | - | chr4_1:59662688-59662707 | Msa0560360:intron | 55.0% | |
TGGATGGACGGCTCTACACT+GGG | - | chr4_1:59662689-59662708 | Msa0560360:intron | 55.0% | |
CTACACTGGGCTGCATCATG+TGG | - | chr4_1:59662702-59662721 | Msa0560360:intron | 55.0% | |
GGTTGCTCTCCTTGTCTCCA+TGG | - | chr4_1:59663172-59663191 | Msa0560360:CDS | 55.0% | |
CCTGAAGGGAATGCTGGACA+TGG | + | chr4_1:59663224-59663243 | None:intergenic | 55.0% | |
CCATGTCCAGCATTCCCTTC+AGG | - | chr4_1:59663221-59663240 | Msa0560360:intron | 55.0% | |
TCGCCAGAAGCAAGATCTGC+AGG | + | chr4_1:59663254-59663273 | None:intergenic | 55.0% | |
GCAGATCTTGCTTCTGGCGA+TGG | - | chr4_1:59663254-59663273 | Msa0560360:intron | 55.0% | |
GAATTGCAACGCCTGTGCAC+TGG | - | chr4_1:59663411-59663430 | Msa0560360:intron | 55.0% | |
ATTGCAACGCCTGTGCACTG+GGG | - | chr4_1:59663413-59663432 | Msa0560360:intron | 55.0% | |
ACCCTCCCCATGTCCAGATT+TGG | + | chr4_1:59663633-59663652 | None:intergenic | 55.0% | |
GCCTTCTATGGCAATTGGGC+TGG | + | chr4_1:59663814-59663833 | None:intergenic | 55.0% | |
GCCCAATTGCCATAGAAGGC+TGG | - | chr4_1:59663814-59663833 | Msa0560360:intron | 55.0% | |
CCCCAGCCTTCTATGGCAAT+TGG | + | chr4_1:59663819-59663838 | None:intergenic | 55.0% | |
ACTCAGTCCCCAGCCTTCTA+TGG | + | chr4_1:59663826-59663845 | None:intergenic | 55.0% | |
CATTTGGTCCGTGGGAATCC+TGG | - | chr4_1:59663995-59664014 | Msa0560360:intron | 55.0% | |
CGTAAGGGCAGTGGTTTACG+TGG | - | chr4_1:59664041-59664060 | Msa0560360:intron | 55.0% | |
! | TTTCGGGAAGGCTGGTTGGT+TGG | + | chr4_1:59664100-59664119 | None:intergenic | 55.0% |
ACCAACCAGCCTTCCCGAAA+AGG | - | chr4_1:59664100-59664119 | Msa0560360:intron | 55.0% | |
!! | TCCTTTTCGGGAAGGCTGGT+TGG | + | chr4_1:59664104-59664123 | None:intergenic | 55.0% |
AACCAGCCTTCCCGAAAAGG+AGG | - | chr4_1:59664103-59664122 | Msa0560360:intron | 55.0% | |
!! | ATCCTCCTTTTCGGGAAGGC+TGG | + | chr4_1:59664108-59664127 | None:intergenic | 55.0% |
GGGCCGTCTATTAACAGGAG+AGG | + | chr4_1:59664512-59664531 | None:intergenic | 55.0% | |
! | CTGACGGGCCGTCTATTAAC+AGG | + | chr4_1:59664517-59664536 | None:intergenic | 55.0% |
! | ATACTTGGTGGCCGGGTAGG+CGG | + | chr4_1:59657289-59657308 | None:intergenic | 60.0% |
! | ACCATACTTGGTGGCCGGGT+AGG | + | chr4_1:59657292-59657311 | None:intergenic | 60.0% |
CTCGGCATGCAACTGCCATG+TGG | + | chr4_1:59658247-59658266 | None:intergenic | 60.0% | |
TACCCCCCTGAACAAGTGGG+AGG | + | chr4_1:59660231-59660250 | None:intergenic | 60.0% | |
CTACTTCCGCCGTCCACATC+TGG | - | chr4_1:59660757-59660776 | Msa0560360:CDS | 60.0% | |
ACTTCCGCCGTCCACATCTG+GGG | - | chr4_1:59660759-59660778 | Msa0560360:CDS | 60.0% | |
AGCCCACTGAAATCGGCACC+GGG | - | chr4_1:59660819-59660838 | Msa0560360:intron | 60.0% | |
!! | CACCCGGTGCCGATTTCAGT+GGG | + | chr4_1:59660824-59660843 | None:intergenic | 60.0% |
!! | TCACCCGGTGCCGATTTCAG+TGG | + | chr4_1:59660825-59660844 | None:intergenic | 60.0% |
!! | TGGCCTGGTGGTGTTGGCTT+GGG | + | chr4_1:59660887-59660906 | None:intergenic | 60.0% |
!! | TTGGCCTGGTGGTGTTGGCT+TGG | + | chr4_1:59660888-59660907 | None:intergenic | 60.0% |
!! | TTGGGTTGGCCTGGTGGTGT+TGG | + | chr4_1:59660893-59660912 | None:intergenic | 60.0% |
ACCACCAGGCCAACCCAAGT+TGG | - | chr4_1:59660895-59660914 | Msa0560360:intron | 60.0% | |
!! | ACCAACTTGGGTTGGCCTGG+TGG | + | chr4_1:59660899-59660918 | None:intergenic | 60.0% |
ACTGGGCTGCATCATGTGGC+AGG | - | chr4_1:59662706-59662725 | Msa0560360:intron | 60.0% | |
CAGCTGCACCCATGGAGACA+AGG | + | chr4_1:59663184-59663203 | None:intergenic | 60.0% | |
GCTTCTGGCGATGGCCAGAA+AGG | - | chr4_1:59663263-59663282 | Msa0560360:intron | 60.0% | |
TTGCAACGCCTGTGCACTGG+GGG | - | chr4_1:59663414-59663433 | Msa0560360:intron | 60.0% | |
GGCCCATGTAAGAGGTCACC+AGG | - | chr4_1:59663950-59663969 | Msa0560360:intron | 60.0% | |
GTCCGTGGGAATCCTGGAGA+AGG | - | chr4_1:59664001-59664020 | Msa0560360:intron | 60.0% | |
! | GAAGGCTGGTTGGTTGGTCG+GGG | + | chr4_1:59664094-59664113 | None:intergenic | 60.0% |
! | GGAAGGCTGGTTGGTTGGTC+GGG | + | chr4_1:59664095-59664114 | None:intergenic | 60.0% |
! | GGGAAGGCTGGTTGGTTGGT+CGG | + | chr4_1:59664096-59664115 | None:intergenic | 60.0% |
CTGTATTGGGCCCGAGCTTC+TGG | + | chr4_1:59664218-59664237 | None:intergenic | 60.0% | |
CAGAAGCTCGGGCCCAATAC+AGG | - | chr4_1:59664216-59664235 | Msa0560360:intron | 60.0% | |
! | GGAAGAGGCAGCTGATGGTG+TGG | - | chr4_1:59664398-59664417 | Msa0560360:CDS | 60.0% |
! | AGAGGCAGCTGATGGTGTGG+AGG | - | chr4_1:59664401-59664420 | Msa0560360:CDS | 60.0% |
GCCTACCCGGCCACCAAGTA+TGG | - | chr4_1:59657288-59657307 | Msa0560360:intron | 65.0% | |
ACGGCGGAAGTAGACGCCCT+TGG | + | chr4_1:59660750-59660769 | None:intergenic | 65.0% | |
ATGGGGGCCCCAGATGTGGA+CGG | + | chr4_1:59660769-59660788 | None:intergenic | 65.0% | |
GGTCCCAAGCCAACACCACC+AGG | - | chr4_1:59660881-59660900 | Msa0560360:intron | 65.0% | |
GTCTCCATGGGTGCAGCTGC+TGG | - | chr4_1:59663185-59663204 | Msa0560360:intron | 65.0% | |
TGCAACGCCTGTGCACTGGG+GGG | - | chr4_1:59663415-59663434 | Msa0560360:intron | 65.0% | |
GGCATATCCCCCCAGTGCAC+AGG | + | chr4_1:59663425-59663444 | None:intergenic | 65.0% | |
CGCTCCAGCAGCTGCACCCA+TGG | + | chr4_1:59663192-59663211 | None:intergenic | 70.0% | |
! | CGGTGGAGGCGTAAGGGCAG+TGG | - | chr4_1:59664032-59664051 | Msa0560360:intron | 70.0% |
GGGGCCCCAGATGTGGACGG+CGG | + | chr4_1:59660766-59660785 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 59655777 | 59664609 | 59655777 | ID=Msa0560360;Name=Msa0560360 |
chr4_1 | mRNA | 59655777 | 59664609 | 59655777 | ID=Msa0560360-mRNA-1;Parent=Msa0560360;Name=Msa0560360-mRNA-1;_AED=0.08;_eAED=0.08;_QI=180|1|1|1|1|1|13|124|1029 |
chr4_1 | exon | 59655777 | 59656014 | 59655777 | ID=Msa0560360-mRNA-1:exon:18475;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59656109 | 59656435 | 59656109 | ID=Msa0560360-mRNA-1:exon:18474;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59656635 | 59657223 | 59656635 | ID=Msa0560360-mRNA-1:exon:18473;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59657659 | 59658350 | 59657659 | ID=Msa0560360-mRNA-1:exon:18472;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59658706 | 59659149 | 59658706 | ID=Msa0560360-mRNA-1:exon:18471;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59659957 | 59660168 | 59659957 | ID=Msa0560360-mRNA-1:exon:18470;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59660317 | 59660442 | 59660317 | ID=Msa0560360-mRNA-1:exon:18469;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59660632 | 59660809 | 59660632 | ID=Msa0560360-mRNA-1:exon:18468;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59661885 | 59661927 | 59661885 | ID=Msa0560360-mRNA-1:exon:18467;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59662220 | 59662308 | 59662220 | ID=Msa0560360-mRNA-1:exon:18466;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59662478 | 59662593 | 59662478 | ID=Msa0560360-mRNA-1:exon:18465;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59663082 | 59663201 | 59663082 | ID=Msa0560360-mRNA-1:exon:18464;Parent=Msa0560360-mRNA-1 |
chr4_1 | exon | 59664390 | 59664609 | 59664390 | ID=Msa0560360-mRNA-1:exon:18463;Parent=Msa0560360-mRNA-1 |
chr4_1 | five_prime_UTR | 59664430 | 59664609 | 59664430 | ID=Msa0560360-mRNA-1:five_prime_utr;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59664390 | 59664429 | 59664390 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59663082 | 59663201 | 59663082 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59662478 | 59662593 | 59662478 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59662220 | 59662308 | 59662220 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59661885 | 59661927 | 59661885 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59660632 | 59660809 | 59660632 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59660317 | 59660442 | 59660317 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59659957 | 59660168 | 59659957 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59658706 | 59659149 | 59658706 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59657659 | 59658350 | 59657659 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59656635 | 59657223 | 59656635 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59656109 | 59656435 | 59656109 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | CDS | 59655901 | 59656014 | 59655901 | ID=Msa0560360-mRNA-1:cds;Parent=Msa0560360-mRNA-1 |
chr4_1 | three_prime_UTR | 59655777 | 59655900 | 59655777 | ID=Msa0560360-mRNA-1:three_prime_utr;Parent=Msa0560360-mRNA-1 |
Gene Sequence |
Protein sequence |