Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561810 | XP_013457368.1 | 92.308 | 247 | 7 | 3 | 1 | 245 | 1 | 237 | 4.52e-163 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561810 | sp|Q1G3Q4|RITF1_ARATH | 37.743 | 257 | 123 | 4 | 20 | 244 | 4 | 255 | 1.99e-50 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561810 | A0A072UNM6 | 92.308 | 247 | 7 | 3 | 1 | 245 | 1 | 237 | 2.16e-163 | 461 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0561810 | TF | PLATZ |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561810 | MtrunA17_Chr2g0297251 | 70.996 | 231 | 51 | 3 | 21 | 244 | 36 | 257 | 1.77e-112 | 323 |
| Msa0561810 | MtrunA17_Chr4g0065041 | 41.667 | 252 | 114 | 5 | 20 | 244 | 6 | 251 | 5.18e-56 | 179 |
| Msa0561810 | MtrunA17_Chr7g0230511 | 40.081 | 247 | 121 | 4 | 19 | 244 | 6 | 246 | 4.86e-53 | 171 |
| Msa0561810 | MtrunA17_Chr4g0052461 | 96.000 | 75 | 3 | 0 | 1 | 75 | 1 | 75 | 1.98e-49 | 157 |
| Msa0561810 | MtrunA17_Chr4g0052451 | 91.667 | 84 | 6 | 1 | 72 | 154 | 10 | 93 | 2.87e-49 | 157 |
| Msa0561810 | MtrunA17_Chr5g0395181 | 34.821 | 224 | 108 | 6 | 22 | 244 | 21 | 207 | 2.10e-36 | 128 |
| Msa0561810 | MtrunA17_Chr4g0040071 | 45.455 | 132 | 66 | 2 | 22 | 152 | 15 | 141 | 2.42e-35 | 125 |
| Msa0561810 | MtrunA17_Chr5g0411151 | 34.188 | 234 | 111 | 7 | 19 | 244 | 32 | 230 | 4.99e-35 | 125 |
| Msa0561810 | MtrunA17_Chr8g0366581 | 43.165 | 139 | 73 | 2 | 15 | 152 | 26 | 159 | 2.73e-34 | 123 |
| Msa0561810 | MtrunA17_Chr7g0265291 | 34.361 | 227 | 114 | 6 | 22 | 244 | 7 | 202 | 5.28e-32 | 116 |
| Msa0561810 | MtrunA17_Chr1g0179781 | 33.333 | 225 | 118 | 7 | 22 | 244 | 7 | 201 | 8.98e-31 | 113 |
| Msa0561810 | MtrunA17_Chr2g0320521 | 31.356 | 236 | 137 | 7 | 24 | 245 | 8 | 232 | 4.30e-24 | 96.3 |
| Msa0561810 | MtrunA17_Chr2g0308401 | 39.706 | 136 | 76 | 4 | 24 | 153 | 6 | 141 | 5.34e-22 | 89.0 |
| Msa0561810 | MtrunA17_Chr4g0020811 | 38.971 | 136 | 77 | 4 | 24 | 153 | 8 | 143 | 2.66e-21 | 87.0 |
| Msa0561810 | MtrunA17_Chr2g0320551 | 36.765 | 136 | 80 | 4 | 24 | 153 | 6 | 141 | 4.05e-21 | 87.0 |
| Msa0561810 | MtrunA17_Chr2g0320561 | 28.514 | 249 | 140 | 7 | 24 | 245 | 6 | 243 | 7.23e-21 | 88.2 |
| Msa0561810 | MtrunA17_Chr8g0392151 | 30.357 | 168 | 97 | 5 | 24 | 172 | 15 | 181 | 3.89e-18 | 80.5 |
| Msa0561810 | MtrunA17_Chr5g0434331 | 32.298 | 161 | 85 | 6 | 12 | 160 | 29 | 177 | 2.23e-16 | 75.1 |
| Msa0561810 | MtrunA17_Chr8g0386511 | 38.182 | 110 | 57 | 4 | 57 | 161 | 1 | 104 | 4.10e-15 | 70.5 |
| Msa0561810 | MtrunA17_Chr1g0161601 | 43.210 | 81 | 44 | 2 | 19 | 99 | 45 | 123 | 7.26e-14 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561810 | AT1G31040.1 | 57.692 | 234 | 80 | 4 | 21 | 244 | 18 | 242 | 6.37e-89 | 263 |
| Msa0561810 | AT3G60670.1 | 54.605 | 152 | 64 | 1 | 16 | 167 | 1 | 147 | 5.22e-56 | 179 |
| Msa0561810 | AT2G12646.1 | 37.743 | 257 | 123 | 4 | 20 | 244 | 4 | 255 | 2.02e-51 | 168 |
| Msa0561810 | AT2G12646.2 | 37.743 | 257 | 123 | 4 | 20 | 244 | 4 | 255 | 2.02e-51 | 168 |
| Msa0561810 | AT2G12646.3 | 37.500 | 256 | 123 | 4 | 21 | 244 | 2 | 252 | 1.29e-50 | 166 |
| Msa0561810 | AT2G01818.1 | 45.390 | 141 | 72 | 2 | 17 | 152 | 6 | 146 | 1.33e-35 | 126 |
| Msa0561810 | AT1G21000.2 | 34.137 | 249 | 120 | 7 | 22 | 244 | 13 | 243 | 4.20e-33 | 120 |
| Msa0561810 | AT1G21000.1 | 34.137 | 249 | 120 | 7 | 22 | 244 | 16 | 246 | 4.81e-33 | 120 |
| Msa0561810 | AT1G32700.1 | 35.714 | 224 | 114 | 6 | 22 | 244 | 12 | 206 | 1.32e-32 | 118 |
| Msa0561810 | AT2G27930.1 | 44.366 | 142 | 73 | 3 | 20 | 155 | 2 | 143 | 8.95e-32 | 115 |
| Msa0561810 | AT2G27930.4 | 44.366 | 142 | 73 | 3 | 20 | 155 | 2 | 143 | 8.95e-32 | 115 |
| Msa0561810 | AT4G17900.1 | 44.118 | 136 | 69 | 3 | 19 | 152 | 31 | 161 | 9.39e-32 | 116 |
| Msa0561810 | AT1G76590.1 | 34.413 | 247 | 119 | 8 | 22 | 244 | 18 | 245 | 1.22e-31 | 117 |
| Msa0561810 | AT4G17900.2 | 44.118 | 136 | 69 | 3 | 19 | 152 | 17 | 147 | 2.53e-31 | 115 |
| Msa0561810 | AT1G43000.2 | 34.513 | 226 | 127 | 7 | 22 | 244 | 16 | 223 | 4.06e-31 | 115 |
| Msa0561810 | AT1G43000.1 | 34.513 | 226 | 127 | 7 | 22 | 244 | 9 | 216 | 4.50e-31 | 114 |
| Msa0561810 | AT2G27930.3 | 44.604 | 139 | 71 | 3 | 20 | 152 | 2 | 140 | 6.23e-31 | 112 |
| Msa0561810 | AT2G27930.2 | 44.604 | 139 | 71 | 3 | 20 | 152 | 2 | 140 | 6.23e-31 | 112 |
| Msa0561810 | AT5G46710.2 | 40.426 | 141 | 77 | 3 | 19 | 157 | 25 | 160 | 1.57e-27 | 103 |
| Msa0561810 | AT5G46710.1 | 41.912 | 136 | 72 | 3 | 19 | 152 | 25 | 155 | 1.71e-27 | 105 |
| Msa0561810 | AT5G46710.3 | 41.912 | 136 | 72 | 3 | 19 | 152 | 9 | 139 | 2.77e-27 | 104 |
| Msa0561810 | AT1G32700.2 | 34.694 | 196 | 98 | 6 | 50 | 244 | 1 | 167 | 3.55e-23 | 92.8 |
| Msa0561810 | AT2G01818.2 | 49.351 | 77 | 38 | 1 | 77 | 152 | 6 | 82 | 6.66e-19 | 81.3 |
| Msa0561810 | AT2G27930.5 | 46.591 | 88 | 43 | 1 | 72 | 155 | 59 | 146 | 2.13e-18 | 80.9 |
| Msa0561810 | AT2G27930.6 | 46.591 | 88 | 43 | 1 | 72 | 155 | 59 | 146 | 2.13e-18 | 80.9 |
Find 75 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTATTGGTAGGGACAAAT+TGG | 0.222568 | 4_1:+61406359 | None:intergenic |
| ATTCGCAGTTCGAGGGTTTA+AGG | 0.232236 | 4_1:-61406417 | Msa0561810:CDS |
| TTTCGTTCTTCCTTTGGTTC+TGG | 0.291074 | 4_1:+61412958 | None:intergenic |
| TCTCCCTTTGCTTCTGATGA+TGG | 0.298330 | 4_1:+61413056 | None:intergenic |
| TTAATGGGTGAGACATTCTT+TGG | 0.304959 | 4_1:-61412996 | Msa0561810:CDS |
| TTCGCACCGTTAATCGTATA+TGG | 0.314823 | 4_1:+61409461 | None:intergenic |
| TCCCTCTCATCCCCTCCTTC+AGG | 0.344793 | 4_1:-61412877 | Msa0561810:intron |
| AGACATTCTTTGGGCGTTGT+GGG | 0.349334 | 4_1:-61412986 | Msa0561810:CDS |
| TAGATTAGAGGAGCTCTCTT+AGG | 0.359247 | 4_1:+61406229 | None:intergenic |
| CACTTGTGACAGGATTCTTC+AGG | 0.373696 | 4_1:-61409360 | Msa0561810:CDS |
| ATTGCACTGGTCTAGATTAG+AGG | 0.377847 | 4_1:+61406217 | None:intergenic |
| TATTTGTTTGACCTGAATAT+AGG | 0.411844 | 4_1:+61409641 | None:intergenic |
| CATCGATTGCTCCTATATTC+AGG | 0.420826 | 4_1:-61409652 | Msa0561810:intron |
| CTCCCTTTGCTTCTGATGAT+GGG | 0.428222 | 4_1:+61413057 | None:intergenic |
| AGAGAGACAGTGAGGGCAAA+TGG | 0.430370 | 4_1:+61412905 | None:intergenic |
| CGTTCTTCCTTTGGTTCTGG+TGG | 0.436735 | 4_1:+61412961 | None:intergenic |
| TTCGCAGTTCGAGGGTTTAA+GGG | 0.440322 | 4_1:-61406416 | Msa0561810:CDS |
| AATGGTTTCTTCCTCTCCCT+TGG | 0.443176 | 4_1:-61406271 | Msa0561810:CDS |
| TGCATGGTTAGAGAGGTTAA+TGG | 0.448349 | 4_1:-61413012 | Msa0561810:CDS |
| TTACCATGACGTGGTTCAAT+TGG | 0.448712 | 4_1:-61409691 | Msa0561810:CDS |
| ACTCTTGCTGCACTTGTGAC+AGG | 0.455565 | 4_1:-61409370 | Msa0561810:CDS |
| TCTTCCTCTCCCTTGGAAGT+AGG | 0.464980 | 4_1:-61406264 | Msa0561810:CDS |
| TAATGGGTGAGACATTCTTT+GGG | 0.465505 | 4_1:-61412995 | Msa0561810:CDS |
| TGCATGAGAGAGAACAGAAA+TGG | 0.467641 | 4_1:+61409330 | None:intergenic |
| GGGTGAGACATGAGAGGAAC+TGG | 0.468874 | 4_1:-61413086 | None:intergenic |
| GCATGGTTAGAGAGGTTAAT+GGG | 0.474331 | 4_1:-61413011 | Msa0561810:CDS |
| GAGACATTCTTTGGGCGTTG+TGG | 0.480485 | 4_1:-61412987 | Msa0561810:CDS |
| GTAGCCTCCTCAGTATTGGT+AGG | 0.491283 | 4_1:+61406349 | None:intergenic |
| CTCCCTTGGAAGTAGGAGAA+AGG | 0.492891 | 4_1:-61406257 | Msa0561810:CDS |
| ATGCAGCCATATACGATTAA+CGG | 0.494856 | 4_1:-61409467 | Msa0561810:intron |
| ACCTGAAGGAGGGGATGAGA+GGG | 0.503723 | 4_1:+61412876 | None:intergenic |
| TTCTCCTACTTCCAAGGGAG+AGG | 0.505138 | 4_1:+61406260 | None:intergenic |
| CACCCTTTCTCCTACTTCCA+AGG | 0.505790 | 4_1:+61406254 | None:intergenic |
| TACCATGACGTGGTTCAATT+GGG | 0.505968 | 4_1:-61409690 | Msa0561810:CDS |
| TCCCTTGGAAGTAGGAGAAA+GGG | 0.513516 | 4_1:-61406256 | Msa0561810:CDS |
| TATTATTCATATTCATAGAA+CGG | 0.516679 | 4_1:+61406323 | None:intergenic |
| ATGGAATCGATGTATTATGC+TGG | 0.530003 | 4_1:+61406456 | None:intergenic |
| AGTATTGGTAGGGACAAATT+GGG | 0.539547 | 4_1:+61406360 | None:intergenic |
| AAGGGAGAGGAAGAAACCAT+TGG | 0.549097 | 4_1:+61406273 | None:intergenic |
| GCTTGTAGCCTCCTCAGTAT+TGG | 0.552367 | 4_1:+61406345 | None:intergenic |
| GTCACAAGTGCAGCAAGAGT+TGG | 0.556394 | 4_1:+61409373 | None:intergenic |
| TACCTGAAGGAGGGGATGAG+AGG | 0.560570 | 4_1:+61412875 | None:intergenic |
| TGACCCATCATCAGAAGCAA+AGG | 0.564164 | 4_1:-61413060 | Msa0561810:CDS |
| TAAATGAGAGGGTGCAGTCA+AGG | 0.569301 | 4_1:-61409427 | Msa0561810:CDS |
| GACCCATCATCAGAAGCAAA+GGG | 0.572363 | 4_1:-61413059 | Msa0561810:CDS |
| ACCCTTTCTCCTACTTCCAA+GGG | 0.574052 | 4_1:+61406255 | None:intergenic |
| GACATTCTTTGGGCGTTGTG+GGG | 0.576836 | 4_1:-61412985 | Msa0561810:CDS |
| TTTAAGGGTAGATAGATCAG+AGG | 0.582293 | 4_1:-61406401 | Msa0561810:CDS |
| TTTCTGTTCTCTCTCATGCA+AGG | 0.584910 | 4_1:-61409327 | Msa0561810:intron |
| TGAGAGAGAACAGAAATGGA+AGG | 0.587138 | 4_1:+61409334 | None:intergenic |
| GCCATATTGTGCAGGTGAGA+AGG | 0.589373 | 4_1:-61409719 | Msa0561810:intron |
| TAGCCTCCTCAGTATTGGTA+GGG | 0.589520 | 4_1:+61406350 | None:intergenic |
| ATTAACCTCTCTAACCATGC+AGG | 0.589991 | 4_1:+61413014 | None:intergenic |
| AGTGATATTCTTAAATGAGA+GGG | 0.594917 | 4_1:-61409438 | Msa0561810:CDS |
| GTTACTAGTACCTGAAGGAG+GGG | 0.599140 | 4_1:+61412867 | None:intergenic |
| AATAATGCAGGTTGATCACA+TGG | 0.599574 | 4_1:-61406500 | Msa0561810:intron |
| GTGGGGTCCACCAGAACCAA+AGG | 0.600178 | 4_1:-61412968 | Msa0561810:CDS |
| AAGTGATATTCTTAAATGAG+AGG | 0.602594 | 4_1:-61409439 | Msa0561810:CDS |
| AGAAACCTGCATGGTTAGAG+AGG | 0.605580 | 4_1:-61413019 | Msa0561810:CDS |
| CCACCCAACAACAAAACCAA+TGG | 0.609103 | 4_1:-61406289 | Msa0561810:CDS |
| AGTTACTAGTACCTGAAGGA+GGG | 0.618175 | 4_1:+61412866 | None:intergenic |
| AGTGCAGCAAGAGTTGGCAT+TGG | 0.622670 | 4_1:+61409379 | None:intergenic |
| AAGTTACTAGTACCTGAAGG+AGG | 0.625782 | 4_1:+61412865 | None:intergenic |
| CACCCAATTGAACCACGTCA+TGG | 0.626928 | 4_1:+61409688 | None:intergenic |
| GATGAGAAGAGAGACAGTGA+GGG | 0.627570 | 4_1:+61412898 | None:intergenic |
| GAGAGAGAACAGAAATGGAA+GGG | 0.627838 | 4_1:+61409335 | None:intergenic |
| GGATGAGAAGAGAGACAGTG+AGG | 0.645133 | 4_1:+61412897 | None:intergenic |
| GTTGATCACATGGTATACAA+AGG | 0.657322 | 4_1:-61406490 | Msa0561810:CDS |
| GTGCAGTCAAGGTCATGCAA+AGG | 0.664808 | 4_1:-61409416 | Msa0561810:CDS |
| TGTCCCTACCAATACTGAGG+AGG | 0.667660 | 4_1:-61406353 | Msa0561810:CDS |
| AAGTGAATCAGAAACCTGCA+TGG | 0.669083 | 4_1:-61413028 | Msa0561810:CDS |
| TGAGACAACAGTGCAAACAA+AGG | 0.686217 | 4_1:+61412928 | None:intergenic |
| AAGGTATGTTTACCATGACG+TGG | 0.686416 | 4_1:-61409700 | Msa0561810:CDS |
| ATTTGTCCCTACCAATACTG+AGG | 0.699630 | 4_1:-61406356 | Msa0561810:CDS |
| GTTGTGGGGTGAGACATGAG+AGG | 0.742571 | 4_1:-61413092 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATTATTATTAT+AGG | - | chr4_1:61407123-61407142 | Msa0561810:intron | 0.0% |
| !!! | TTAATTTAATTTTTATTTTT+TGG | - | chr4_1:61407184-61407203 | Msa0561810:intron | 0.0% |
| !!! | TTTATTTATTATTATTTTTT+CGG | - | chr4_1:61407682-61407701 | Msa0561810:intron | 0.0% |
| !! | AAATAAAAAAAAAATTATTA+GGG | - | chr4_1:61412504-61412523 | Msa0561810:intron | 0.0% |
| !!! | ATTTTATTTAAATTATTTTT+TGG | - | chr4_1:61412728-61412747 | Msa0561810:intron | 0.0% |
| !!! | TTATTTTTGATAAATTTGAT+AGG | - | chr4_1:61406729-61406748 | Msa0561810:intron | 10.0% |
| !!! | AATTAAGTTTAATTTTGTAA+AGG | - | chr4_1:61406886-61406905 | Msa0561810:intron | 10.0% |
| !!! | GAATTTTTTATTTAAACATT+TGG | - | chr4_1:61406922-61406941 | Msa0561810:intron | 10.0% |
| !! | TGTAATAAAGAATAATTTAA+TGG | - | chr4_1:61407762-61407781 | Msa0561810:intron | 10.0% |
| !!! | TTTTGAAAAATGAAAAAAAA+TGG | - | chr4_1:61407904-61407923 | Msa0561810:intron | 10.0% |
| !! | AAAAAAAAACAAAAAAAATG+AGG | - | chr4_1:61408775-61408794 | Msa0561810:intron | 10.0% |
| !! | TAAATATAGTTAATCTTATA+CGG | + | chr4_1:61409072-61409091 | None:intergenic | 10.0% |
| !!! | CTTAACAAAAATATTTATTT+TGG | + | chr4_1:61409125-61409144 | None:intergenic | 10.0% |
| !!! | CAAAATAAATATTTTTGTTA+AGG | - | chr4_1:61409123-61409142 | Msa0561810:intron | 10.0% |
| !!! | GATTTTATTTTATTTTCTTA+AGG | + | chr4_1:61409241-61409260 | None:intergenic | 10.0% |
| !! | AAATATTATTAAATTTGGTT+CGG | + | chr4_1:61409278-61409297 | None:intergenic | 10.0% |
| !! | CAATGAAATATTATTAAATT+TGG | + | chr4_1:61409283-61409302 | None:intergenic | 10.0% |
| !! | CAAATTTAATAATATTTCAT+TGG | - | chr4_1:61409281-61409300 | Msa0561810:intron | 10.0% |
| !! | TATTCTCAAATTATATAATT+TGG | - | chr4_1:61410179-61410198 | Msa0561810:intron | 10.0% |
| !! | ATTCTCAAATTATATAATTT+GGG | - | chr4_1:61410180-61410199 | Msa0561810:intron | 10.0% |
| !!! | TTTTTTTAGTAAATATCATT+AGG | - | chr4_1:61410655-61410674 | Msa0561810:intron | 10.0% |
| !!! | TTTTTTACTTATATTAATAG+TGG | + | chr4_1:61410955-61410974 | None:intergenic | 10.0% |
| !!! | ATAAGTAAAAAATTGTTTTT+AGG | - | chr4_1:61410963-61410982 | Msa0561810:intron | 10.0% |
| !!! | ATAAGAAAAAAACAATTTTT+AGG | + | chr4_1:61411028-61411047 | None:intergenic | 10.0% |
| !!! | TTGAAAATGTTAATTATTTT+AGG | - | chr4_1:61411390-61411409 | Msa0561810:intron | 10.0% |
| !! | TTTATATGAAAAAATTAAGA+GGG | + | chr4_1:61411497-61411516 | None:intergenic | 10.0% |
| !!! | ATGATTATTTTATTGAAAAA+TGG | + | chr4_1:61412305-61412324 | None:intergenic | 10.0% |
| !! | AAAAGAAGTAATAGAAATTA+AGG | + | chr4_1:61406541-61406560 | None:intergenic | 15.0% |
| !! | AATAGAATAAAGTAATCTAA+AGG | + | chr4_1:61406585-61406604 | None:intergenic | 15.0% |
| !! | TAATTGAAGAACATATATAT+AGG | + | chr4_1:61406631-61406650 | None:intergenic | 15.0% |
| !!! | TAATTTCTACTTTTATGTTT+TGG | - | chr4_1:61407375-61407394 | Msa0561810:intron | 15.0% |
| !! | TAAAAATAAAAACTAGAGTT+GGG | + | chr4_1:61407531-61407550 | None:intergenic | 15.0% |
| !! | ATTAACAAACTCTATTTAAT+GGG | + | chr4_1:61407599-61407618 | None:intergenic | 15.0% |
| !!! | TTCATTTTTTTTGAAAAATC+TGG | - | chr4_1:61408262-61408281 | Msa0561810:intron | 15.0% |
| !! | TTATTTCATTCTTAAATTAG+GGG | + | chr4_1:61408687-61408706 | None:intergenic | 15.0% |
| !!! | GTTATTTCATTCTTAAATTA+GGG | + | chr4_1:61408688-61408707 | None:intergenic | 15.0% |
| !!! | TGTTATTTCATTCTTAAATT+AGG | + | chr4_1:61408689-61408708 | None:intergenic | 15.0% |
| !!! | GTTTTTTTTTTCAAAATGAA+TGG | + | chr4_1:61408765-61408784 | None:intergenic | 15.0% |
| !!! | AATTTTGTAAAACAACTTAT+AGG | - | chr4_1:61409043-61409062 | Msa0561810:intron | 15.0% |
| !!! | TTATTTTATTTTCTTAAGGA+AGG | + | chr4_1:61409237-61409256 | None:intergenic | 15.0% |
| !!! | ATATACTGATATTGATTTTT+GGG | + | chr4_1:61409721-61409740 | None:intergenic | 15.0% |
| !!! | TATATACTGATATTGATTTT+TGG | + | chr4_1:61409722-61409741 | None:intergenic | 15.0% |
| !!! | TTATTAGAATTAAGCAATTT+TGG | - | chr4_1:61409767-61409786 | Msa0561810:intron | 15.0% |
| !!! | TTTTGGTTATTAATTAACAT+AGG | - | chr4_1:61409784-61409803 | Msa0561810:intron | 15.0% |
| !! | CAATATTTATTAGTTATGAA+GGG | - | chr4_1:61410487-61410506 | Msa0561810:intron | 15.0% |
| !! | TCCTTATAAAATAAACTAAT+GGG | + | chr4_1:61410607-61410626 | None:intergenic | 15.0% |
| !! | AATACAACAATATTTGATAA+AGG | + | chr4_1:61411279-61411298 | None:intergenic | 15.0% |
| !! | GTTTATATGAAAAAATTAAG+AGG | + | chr4_1:61411498-61411517 | None:intergenic | 15.0% |
| !! | TGTTTAAATATTATAAAGTG+TGG | - | chr4_1:61411754-61411773 | Msa0561810:intron | 15.0% |
| !!! | TTATAATATTAAAAGAGTGT+GGG | + | chr4_1:61412067-61412086 | None:intergenic | 15.0% |
| !! | TTTATAATATTAAAAGAGTG+TGG | + | chr4_1:61412068-61412087 | None:intergenic | 15.0% |
| !! | ATCTATCAAAAAATCTAAAT+GGG | + | chr4_1:61412348-61412367 | None:intergenic | 15.0% |
| !! | ATATTTGTATAAAATAATGC+AGG | - | chr4_1:61412793-61412812 | Msa0561810:intron | 15.0% |
| !! | TATTATTCATATTCATAGAA+CGG | + | chr4_1:61412985-61413004 | None:intergenic | 15.0% |
| !!! | TTAAAATTTTGGAGTTGATA+AGG | + | chr4_1:61406481-61406500 | None:intergenic | 20.0% |
| !!! | TATCAACTCCAAAATTTTAA+AGG | - | chr4_1:61406481-61406500 | Msa0561810:CDS | 20.0% |
| !!! | ATCAACTCCAAAATTTTAAA+GGG | - | chr4_1:61406482-61406501 | Msa0561810:CDS | 20.0% |
| !! | TATTTGCAAATTAATTCATG+TGG | - | chr4_1:61406505-61406524 | Msa0561810:intron | 20.0% |
| !!! | TATTACTTCTTTTTTTCCTT+TGG | - | chr4_1:61406548-61406567 | Msa0561810:intron | 20.0% |
| !! | TGAAGTAAGTATTTAGAAAT+AGG | + | chr4_1:61406818-61406837 | None:intergenic | 20.0% |
| !!! | TTTGTTTGAATTTTATACGA+AGG | + | chr4_1:61407009-61407028 | None:intergenic | 20.0% |
| !! | CTAAAAATAAAAACTAGAGT+TGG | + | chr4_1:61407532-61407551 | None:intergenic | 20.0% |
| !!! | CAACTCTAGTTTTTATTTTT+AGG | - | chr4_1:61407530-61407549 | Msa0561810:intron | 20.0% |
| !! | AAGTTTGGTTAATGTTATAT+TGG | + | chr4_1:61407568-61407587 | None:intergenic | 20.0% |
| !! | CATTAACAAACTCTATTTAA+TGG | + | chr4_1:61407600-61407619 | None:intergenic | 20.0% |
| !!! | CATTTTTTTCATATTTTGCA+AGG | + | chr4_1:61407869-61407888 | None:intergenic | 20.0% |
| !! | CTTGCAAAATATGAAAAAAA+TGG | - | chr4_1:61407867-61407886 | Msa0561810:intron | 20.0% |
| !!! | TTCATTTTTTTCGAAAAATC+TGG | - | chr4_1:61407982-61408001 | Msa0561810:intron | 20.0% |
| !!! | TCATTTTTTTTCGAAAAATC+TGG | - | chr4_1:61408052-61408071 | Msa0561810:intron | 20.0% |
| !!! | TTCATTTTTTTCGAAAAATC+TGG | - | chr4_1:61407982-61408001 | Msa0561810:intron | 20.0% |
| !!! | TTCATTTTTTTCGAAAAATC+TGG | - | chr4_1:61407982-61408001 | Msa0561810:intron | 20.0% |
| !!! | TCATTTTTTTTCGAAAAATC+TGG | - | chr4_1:61408052-61408071 | Msa0561810:intron | 20.0% |
| !!! | TTCATTTTTTTCGAAAAATC+TGG | - | chr4_1:61407982-61408001 | Msa0561810:intron | 20.0% |
| !!! | TTCATTTTTTTCGAAAAATC+TGG | - | chr4_1:61407982-61408001 | Msa0561810:intron | 20.0% |
| !!! | CATTTCTTTTCGAAAAATTT+CGG | - | chr4_1:61408615-61408634 | Msa0561810:intron | 20.0% |
| !! | CAAAAAATAAATAGAGTGAT+AGG | + | chr4_1:61408938-61408957 | None:intergenic | 20.0% |
| !!! | TCACTCTATTTATTTTTTGA+AGG | - | chr4_1:61408939-61408958 | Msa0561810:intron | 20.0% |
| !! | TAGAAATAGAATACTATGTT+AGG | - | chr4_1:61409412-61409431 | Msa0561810:CDS | 20.0% |
| !! | TTTGTGATGATATGTAAATA+TGG | - | chr4_1:61409444-61409463 | Msa0561810:CDS | 20.0% |
| !! | CAAAATTATAGTACAAATGA+GGG | + | chr4_1:61409499-61409518 | None:intergenic | 20.0% |
| !! | ACAAAATTATAGTACAAATG+AGG | + | chr4_1:61409500-61409519 | None:intergenic | 20.0% |
| !!! | AAATAATATATGAGTTGGTT+TGG | - | chr4_1:61409810-61409829 | Msa0561810:intron | 20.0% |
| !! | TAGAAATGAGACAAAAATTA+GGG | + | chr4_1:61410012-61410031 | None:intergenic | 20.0% |
| !! | ATAGAAATGAGACAAAAATT+AGG | + | chr4_1:61410013-61410032 | None:intergenic | 20.0% |
| !!! | ACATATATATCATTTCCTTT+TGG | - | chr4_1:61410045-61410064 | Msa0561810:intron | 20.0% |
| !! | AATTTGTATGTGAAAGTAAA+TGG | + | chr4_1:61410071-61410090 | None:intergenic | 20.0% |
| !! | CATACAAAAGTTGAAAAATT+TGG | + | chr4_1:61410106-61410125 | None:intergenic | 20.0% |
| !!! | TGGTGTTATTCTTTTTAAAA+TGG | - | chr4_1:61410386-61410405 | Msa0561810:intron | 20.0% |
| !! | CCTTCATAACTAATAAATAT+TGG | + | chr4_1:61410489-61410508 | None:intergenic | 20.0% |
| !! | CCAATATTTATTAGTTATGA+AGG | - | chr4_1:61410486-61410505 | Msa0561810:intron | 20.0% |
| !!! | TCCCATTAGTTTATTTTATA+AGG | - | chr4_1:61410603-61410622 | Msa0561810:intron | 20.0% |
| !! | CTCCTTATAAAATAAACTAA+TGG | + | chr4_1:61410608-61410627 | None:intergenic | 20.0% |
| !!! | ATCATTTTTCATAAATGCAA+AGG | - | chr4_1:61411300-61411319 | Msa0561810:intron | 20.0% |
| !! | AATTCACTTTGTAAAAAGAT+CGG | - | chr4_1:61411416-61411435 | Msa0561810:intron | 20.0% |
| !!! | TATCTAATAGGTATTTTCAA+TGG | - | chr4_1:61411867-61411886 | Msa0561810:intron | 20.0% |
| !!! | ATCTAATAGGTATTTTCAAT+GGG | - | chr4_1:61411868-61411887 | Msa0561810:intron | 20.0% |
| !!! | AGTTATTGATAATTGATTAG+TGG | - | chr4_1:61412108-61412127 | Msa0561810:intron | 20.0% |
| !!! | GTTATTGATAATTGATTAGT+GGG | - | chr4_1:61412109-61412128 | Msa0561810:intron | 20.0% |
| !!! | ATCATTATTTGAGTTGTTTT+TGG | - | chr4_1:61412320-61412339 | Msa0561810:intron | 20.0% |
| !!! | TCATTATTTGAGTTGTTTTT+GGG | - | chr4_1:61412321-61412340 | Msa0561810:intron | 20.0% |
| !! | CATCTATCAAAAAATCTAAA+TGG | + | chr4_1:61412349-61412368 | None:intergenic | 20.0% |
| !!! | CTGCTTTAATTAATTTTTCT+GGG | - | chr4_1:61412681-61412700 | Msa0561810:intron | 20.0% |
| ! | TAGTAACTTAACTTCTGTTA+TGG | - | chr4_1:61406454-61406473 | Msa0561810:CDS | 25.0% |
| !!! | GCAAATACCCTTTAAAATTT+TGG | + | chr4_1:61406492-61406511 | None:intergenic | 25.0% |
| ! | AAAACCAATCATAGACAATT+TGG | + | chr4_1:61406767-61406786 | None:intergenic | 25.0% |
| ! | ACAGAAAAATAAAGGAAATC+TGG | + | chr4_1:61407037-61407056 | None:intergenic | 25.0% |
| !!! | AGATTTCCTTTATTTTTCTG+TGG | - | chr4_1:61407036-61407055 | Msa0561810:intron | 25.0% |
| !!! | GATTTCCTTTATTTTTCTGT+GGG | - | chr4_1:61407037-61407056 | Msa0561810:intron | 25.0% |
| ! | GAAATTAATCATACAAGACA+TGG | + | chr4_1:61407362-61407381 | None:intergenic | 25.0% |
| ! | GAAAGACAGAATAAGAATTT+GGG | + | chr4_1:61407482-61407501 | None:intergenic | 25.0% |
| ! | AGAAAGACAGAATAAGAATT+TGG | + | chr4_1:61407483-61407502 | None:intergenic | 25.0% |
| ! | TAATGGGATAAATCAAAGTT+TGG | + | chr4_1:61407583-61407602 | None:intergenic | 25.0% |
| ! | TTTCATTTGGAGATGATTAA+AGG | + | chr4_1:61407719-61407738 | None:intergenic | 25.0% |
| ! | TTTGCAAGGAAAAAAAAAGA+AGG | + | chr4_1:61407855-61407874 | None:intergenic | 25.0% |
| !!! | TCATTTTTTTTCGAGAAATC+TGG | - | chr4_1:61408333-61408352 | Msa0561810:intron | 25.0% |
| !!! | TTCTTAAATTAGGGGTATTT+TGG | + | chr4_1:61408679-61408698 | None:intergenic | 25.0% |
| !!! | TATTATTAAATTTGGTTCGG+TGG | + | chr4_1:61409275-61409294 | None:intergenic | 25.0% |
| ! | CAATTATTGTCACACATTAT+TGG | + | chr4_1:61409549-61409568 | None:intergenic | 25.0% |
| ! | ATAATGTGTGACAATAATTG+AGG | - | chr4_1:61409549-61409568 | Msa0561810:intron | 25.0% |
| ! | TATTTGTTTGACCTGAATAT+AGG | + | chr4_1:61409667-61409686 | None:intergenic | 25.0% |
| ! | GGTAGAAATAATATATGAGT+TGG | - | chr4_1:61409805-61409824 | Msa0561810:intron | 25.0% |
| ! | AAGTGATATTCTTAAATGAG+AGG | - | chr4_1:61409866-61409885 | Msa0561810:intron | 25.0% |
| ! | AGTGATATTCTTAAATGAGA+GGG | - | chr4_1:61409867-61409886 | Msa0561810:intron | 25.0% |
| ! | TACTTTCACATACAAATTAC+CGG | - | chr4_1:61410073-61410092 | Msa0561810:intron | 25.0% |
| !!! | GGTGTAACAGAATATTTTAA+CGG | + | chr4_1:61410297-61410316 | None:intergenic | 25.0% |
| ! | TATATGTGTGTATCAATATG+TGG | - | chr4_1:61410362-61410381 | Msa0561810:intron | 25.0% |
| !!! | ATTGTTAGTTTTTGTGTTGA+CGG | - | chr4_1:61410413-61410432 | Msa0561810:intron | 25.0% |
| !! | GCAATTTTTCACATGTATTA+CGG | + | chr4_1:61410782-61410801 | None:intergenic | 25.0% |
| ! | TTTCACACGTATTAAGAAAA+AGG | - | chr4_1:61410905-61410924 | Msa0561810:intron | 25.0% |
| ! | TTCACACGTATTAAGAAAAA+GGG | - | chr4_1:61410906-61410925 | Msa0561810:intron | 25.0% |
| ! | AAGAGAATCGTAGTATAATT+GGG | + | chr4_1:61411590-61411609 | None:intergenic | 25.0% |
| ! | AAAGAGAATCGTAGTATAAT+TGG | + | chr4_1:61411591-61411610 | None:intergenic | 25.0% |
| !!! | TGAGTTTTGATGAATTATCA+TGG | - | chr4_1:61411682-61411701 | Msa0561810:intron | 25.0% |
| !!! | GAGTTTTGATGAATTATCAT+GGG | - | chr4_1:61411683-61411702 | Msa0561810:intron | 25.0% |
| !!! | AGTTTTGATGAATTATCATG+GGG | - | chr4_1:61411684-61411703 | Msa0561810:intron | 25.0% |
| ! | TGAAAATACCTATTAGATAC+CGG | + | chr4_1:61411866-61411885 | None:intergenic | 25.0% |
| ! | TTCAATGGGAGAAAAAAATT+TGG | - | chr4_1:61411882-61411901 | Msa0561810:intron | 25.0% |
| ! | TCAATGGGAGAAAAAAATTT+GGG | - | chr4_1:61411883-61411902 | Msa0561810:intron | 25.0% |
| ! | TCATTTAAGAACCCAAAAAT+GGG | - | chr4_1:61412234-61412253 | Msa0561810:intron | 25.0% |
| !! | TTTTATTGAAAAATGGTGTG+AGG | + | chr4_1:61412298-61412317 | None:intergenic | 25.0% |
| !!! | GCTGCTTTAATTAATTTTTC+TGG | - | chr4_1:61412680-61412699 | Msa0561810:intron | 25.0% |
| ! | AATATGAAAAATGGGATTCA+TGG | + | chr4_1:61412871-61412890 | None:intergenic | 25.0% |
| AAAGGAAAAGAAACATCCAA+AGG | + | chr4_1:61406567-61406586 | None:intergenic | 30.0% | |
| TTTGCCAAATTGTCTATGAT+TGG | - | chr4_1:61406760-61406779 | Msa0561810:intron | 30.0% | |
| !!! | CTATGATTGGTTTTATGACA+TGG | - | chr4_1:61406773-61406792 | Msa0561810:intron | 30.0% |
| ! | ACATGGATTTATGCTTTGTT+TGG | - | chr4_1:61406790-61406809 | Msa0561810:intron | 30.0% |
| ! | TTCTACTCCAGATTTTGTAA+AGG | - | chr4_1:61406858-61406877 | Msa0561810:intron | 30.0% |
| TTGCTATCCTTTACAAAATC+TGG | + | chr4_1:61406868-61406887 | None:intergenic | 30.0% | |
| !!! | TTGGTTTTCTAGAATTGACA+AGG | - | chr4_1:61407203-61407222 | Msa0561810:intron | 30.0% |
| !!! | TGGTTTTCTAGAATTGACAA+GGG | - | chr4_1:61407204-61407223 | Msa0561810:intron | 30.0% |
| CAAACACAATGAGACAAAAT+TGG | + | chr4_1:61407271-61407290 | None:intergenic | 30.0% | |
| !!! | TTTTCCACTTTTTGTTTTCC+AGG | - | chr4_1:61407328-61407347 | Msa0561810:intron | 30.0% |
| ! | TTTGGTTTCTTTCCCATTAA+TGG | - | chr4_1:61407393-61407412 | Msa0561810:intron | 30.0% |
| AAAAGGGATCTTCCATTAAT+GGG | + | chr4_1:61407408-61407427 | None:intergenic | 30.0% | |
| AAAAAGGGATCTTCCATTAA+TGG | + | chr4_1:61407409-61407428 | None:intergenic | 30.0% | |
| GGGGAAATTGGATAAAAAAA+GGG | + | chr4_1:61407424-61407443 | None:intergenic | 30.0% | |
| AGGGGAAATTGGATAAAAAA+AGG | + | chr4_1:61407425-61407444 | None:intergenic | 30.0% | |
| ATCCAATGGTTGAGTAAAAA+AGG | + | chr4_1:61408728-61408747 | None:intergenic | 30.0% | |
| AACCATTGGATTTAATCCAA+TGG | - | chr4_1:61408737-61408756 | Msa0561810:intron | 30.0% | |
| ! | AAACTTTTATAACCTGGTAC+AGG | + | chr4_1:61408851-61408870 | None:intergenic | 30.0% |
| ! | TGAGACAAACTTTTATAACC+TGG | + | chr4_1:61408857-61408876 | None:intergenic | 30.0% |
| GTTTGTCTCAAATTAGAAGT+CGG | - | chr4_1:61408867-61408886 | Msa0561810:intron | 30.0% | |
| AATGAAATGTGACAGTTTCT+GGG | + | chr4_1:61409323-61409342 | None:intergenic | 30.0% | |
| !! | ATATATGAGTTGGTTTGGAA+TGG | - | chr4_1:61409815-61409834 | Msa0561810:intron | 30.0% |
| TGAAAAATTTGGATCTTGAC+CGG | + | chr4_1:61410095-61410114 | None:intergenic | 30.0% | |
| AATATTCTGTTACACCTTTG+AGG | - | chr4_1:61410301-61410320 | Msa0561810:intron | 30.0% | |
| TCTTGAAAATATGACCTCAA+AGG | + | chr4_1:61410318-61410337 | None:intergenic | 30.0% | |
| !! | TTAGTTATGAAGGGTACTTT+AGG | - | chr4_1:61410496-61410515 | Msa0561810:intron | 30.0% |
| AATATCATTAGGTCTCTTGA+TGG | - | chr4_1:61410666-61410685 | Msa0561810:intron | 30.0% | |
| AATGTTAACATGTGACCTAA+GGG | + | chr4_1:61411201-61411220 | None:intergenic | 30.0% | |
| AAATGTTAACATGTGACCTA+AGG | + | chr4_1:61411202-61411221 | None:intergenic | 30.0% | |
| AGATTCTGACATTGTATTCT+TGG | + | chr4_1:61411520-61411539 | None:intergenic | 30.0% | |
| AATACAATGTCAGAATCTTG+TGG | - | chr4_1:61411522-61411541 | Msa0561810:intron | 30.0% | |
| ! | AACATTGTCAACTTTAGGAA+TGG | + | chr4_1:61411566-61411585 | None:intergenic | 30.0% |
| GAAAATACCTATTAGATACC+GGG | + | chr4_1:61411865-61411884 | None:intergenic | 30.0% | |
| CAATGGGAGAAAAAAATTTG+GGG | - | chr4_1:61411884-61411903 | Msa0561810:intron | 30.0% | |
| AATGGGAGAAAAAAATTTGG+GGG | - | chr4_1:61411885-61411904 | Msa0561810:intron | 30.0% | |
| AATAGTTAAAACCATCCCAA+TGG | + | chr4_1:61411945-61411964 | None:intergenic | 30.0% | |
| !!! | GGTTTTAACTATTTAAGACC+CGG | - | chr4_1:61411952-61411971 | Msa0561810:intron | 30.0% |
| AAAAAGATTCTTCCCATTTG+GGG | + | chr4_1:61411991-61412010 | None:intergenic | 30.0% | |
| GAAAAAGATTCTTCCCATTT+GGG | + | chr4_1:61411992-61412011 | None:intergenic | 30.0% | |
| TGAAAAAGATTCTTCCCATT+TGG | + | chr4_1:61411993-61412012 | None:intergenic | 30.0% | |
| ! | AAATGGGAAGAATCTTTTTC+AGG | - | chr4_1:61411992-61412011 | Msa0561810:intron | 30.0% |
| !! | AATGGGAAGAATCTTTTTCA+GGG | - | chr4_1:61411993-61412012 | Msa0561810:intron | 30.0% |
| CTCATTTAAGAACCCAAAAA+TGG | - | chr4_1:61412233-61412252 | Msa0561810:intron | 30.0% | |
| TATTCCACATAAGTAAATGC+AGG | - | chr4_1:61412648-61412667 | Msa0561810:intron | 30.0% | |
| TATGTTTACATGTTGTGTTG+TGG | + | chr4_1:61412776-61412795 | None:intergenic | 30.0% | |
| GAACTGCGAATATGAAAAAT+GGG | + | chr4_1:61412879-61412898 | None:intergenic | 30.0% | |
| !!! | AAACCATTGGTTTTGTTGTT+GGG | + | chr4_1:61413022-61413041 | None:intergenic | 30.0% |
| ! | TTAATGGGTGAGACATTCTT+TGG | - | chr4_1:61406309-61406328 | Msa0561810:CDS | 35.0% |
| ! | TAATGGGTGAGACATTCTTT+GGG | - | chr4_1:61406310-61406329 | Msa0561810:CDS | 35.0% |
| ! | TGTTCTTTTCGTTCTTCCTT+TGG | + | chr4_1:61406356-61406375 | None:intergenic | 35.0% |
| GTTAAGTTACTAGTACCTGA+AGG | + | chr4_1:61406446-61406465 | None:intergenic | 35.0% | |
| CGAATCCCACAGAAAAATAA+AGG | + | chr4_1:61407045-61407064 | None:intergenic | 35.0% | |
| AAGCATCAACAGTGATATCT+GGG | + | chr4_1:61407300-61407319 | None:intergenic | 35.0% | |
| TAAGCATCAACAGTGATATC+TGG | + | chr4_1:61407301-61407320 | None:intergenic | 35.0% | |
| AAGCTTTCGCTTTCAATGAA+AGG | + | chr4_1:61407456-61407475 | None:intergenic | 35.0% | |
| ! | CTGTCTTTCTACTTCAAGTT+TGG | - | chr4_1:61407493-61407512 | Msa0561810:intron | 35.0% |
| AAAACTAGAGTTGGGAAGTA+GGG | + | chr4_1:61407523-61407542 | None:intergenic | 35.0% | |
| AAAAACTAGAGTTGGGAAGT+AGG | + | chr4_1:61407524-61407543 | None:intergenic | 35.0% | |
| CATTTGGAGATGATTAAAGG+TGG | + | chr4_1:61407716-61407735 | None:intergenic | 35.0% | |
| GCAAGGAAAAAAAAAGAAGG+AGG | + | chr4_1:61407852-61407871 | None:intergenic | 35.0% | |
| !!! | GTCCTTTTTTACTCAACCAT+TGG | - | chr4_1:61408723-61408742 | Msa0561810:intron | 35.0% |
| AGCCATTGGATTAAATCCAA+TGG | + | chr4_1:61408742-61408761 | None:intergenic | 35.0% | |
| TTCAAAATGAATGGAGCCAT+TGG | + | chr4_1:61408756-61408775 | None:intergenic | 35.0% | |
| AAAAAAATGAGGTCTCTCAC+CGG | - | chr4_1:61408786-61408805 | Msa0561810:intron | 35.0% | |
| GAATGAAATGTGACAGTTTC+TGG | + | chr4_1:61409324-61409343 | None:intergenic | 35.0% | |
| ATGCAGCCATATACGATTAA+CGG | - | chr4_1:61409838-61409857 | Msa0561810:intron | 35.0% | |
| TGTGAAAGTAAATGGCCAAA+AGG | + | chr4_1:61410063-61410082 | None:intergenic | 35.0% | |
| GGGAACACTAAAACTACTTT+CGG | - | chr4_1:61410200-61410219 | Msa0561810:intron | 35.0% | |
| TACACACATATATGTGCATG+TGG | + | chr4_1:61410354-61410373 | None:intergenic | 35.0% | |
| TGTGTGTATCAATATGTGGT+TGG | - | chr4_1:61410366-61410385 | Msa0561810:intron | 35.0% | |
| !! | TTAGTTTTTGTGTTGACGGT+GGG | - | chr4_1:61410417-61410436 | Msa0561810:intron | 35.0% |
| AATACGTGTGAAATGACAAG+TGG | + | chr4_1:61410898-61410917 | None:intergenic | 35.0% | |
| TATACCACTTTCAGCATCTT+CGG | + | chr4_1:61411339-61411358 | None:intergenic | 35.0% | |
| AGTACTTAGAACATACGCAT+CGG | - | chr4_1:61411461-61411480 | Msa0561810:intron | 35.0% | |
| ! | GACACGTTTGTAGTTTTTGA+TGG | - | chr4_1:61411715-61411734 | Msa0561810:intron | 35.0% |
| ! | CGTTTGTAGTTTTTGATGGA+TGG | - | chr4_1:61411719-61411738 | Msa0561810:intron | 35.0% |
| !! | GTAGTTTTTGATGGATGGTT+TGG | - | chr4_1:61411724-61411743 | Msa0561810:intron | 35.0% |
| ! | CTCTAAGAGTTTGTTTGGTT+TGG | + | chr4_1:61411809-61411828 | None:intergenic | 35.0% |
| ! | GGTCTTTACTATTTAAGACC+CGG | - | chr4_1:61411844-61411863 | Msa0561810:intron | 35.0% |
| ! | TTTAAGACCCGGTATCTAAT+AGG | - | chr4_1:61411855-61411874 | Msa0561810:intron | 35.0% |
| !! | TTTCAGGGTCTTATTAGACT+CGG | - | chr4_1:61412008-61412027 | Msa0561810:intron | 35.0% |
| !! | TTAAGACCTCCACTTTTAAG+CGG | - | chr4_1:61412039-61412058 | Msa0561810:intron | 35.0% |
| TAAGAACTTTGTGTGAGATC+TGG | - | chr4_1:61412139-61412158 | Msa0561810:intron | 35.0% | |
| AAGAACTTTGTGTGAGATCT+GGG | - | chr4_1:61412140-61412159 | Msa0561810:intron | 35.0% | |
| GGAGTGATTGAGTGTTTATT+AGG | - | chr4_1:61412165-61412184 | Msa0561810:intron | 35.0% | |
| ATAGATGATCTCCATTGAAG+TGG | - | chr4_1:61412362-61412381 | Msa0561810:intron | 35.0% | |
| ! | AAGAGACTTGGTTAGTTCAT+AGG | + | chr4_1:61412596-61412615 | None:intergenic | 35.0% |
| TTCAAGAAGAGAAAGAGACT+TGG | + | chr4_1:61412608-61412627 | None:intergenic | 35.0% | |
| GAATATTACTGTCACATTCG+AGG | + | chr4_1:61412633-61412652 | None:intergenic | 35.0% | |
| TCTACCTGCATTTACTTATG+TGG | + | chr4_1:61412655-61412674 | None:intergenic | 35.0% | |
| !! | AATAATGCAGGTTGATCACA+TGG | - | chr4_1:61412805-61412824 | Msa0561810:intron | 35.0% |
| GTTGATCACATGGTATACAA+AGG | - | chr4_1:61412815-61412834 | Msa0561810:intron | 35.0% | |
| ATGGAATCGATGTATTATGC+TGG | + | chr4_1:61412852-61412871 | None:intergenic | 35.0% | |
| CGAACTGCGAATATGAAAAA+TGG | + | chr4_1:61412880-61412899 | None:intergenic | 35.0% | |
| ! | TTTTTCATATTCGCAGTTCG+AGG | - | chr4_1:61412880-61412899 | Msa0561810:CDS | 35.0% |
| ! | TTTTCATATTCGCAGTTCGA+GGG | - | chr4_1:61412881-61412900 | Msa0561810:CDS | 35.0% |
| TTTAAGGGTAGATAGATCAG+AGG | - | chr4_1:61412904-61412923 | Msa0561810:CDS | 35.0% | |
| !! | AGTATTGGTAGGGACAAATT+GGG | + | chr4_1:61412948-61412967 | None:intergenic | 35.0% |
| !!! | GAAACCATTGGTTTTGTTGT+TGG | + | chr4_1:61413023-61413042 | None:intergenic | 35.0% |
| AAGTGAATCAGAAACCTGCA+TGG | - | chr4_1:61406277-61406296 | Msa0561810:CDS | 40.0% | |
| ATTAACCTCTCTAACCATGC+AGG | + | chr4_1:61406294-61406313 | None:intergenic | 40.0% | |
| TGCATGGTTAGAGAGGTTAA+TGG | - | chr4_1:61406293-61406312 | Msa0561810:CDS | 40.0% | |
| GCATGGTTAGAGAGGTTAAT+GGG | - | chr4_1:61406294-61406313 | Msa0561810:CDS | 40.0% | |
| ! | TTTCGTTCTTCCTTTGGTTC+TGG | + | chr4_1:61406350-61406369 | None:intergenic | 40.0% |
| TGAGACAACAGTGCAAACAA+AGG | + | chr4_1:61406380-61406399 | None:intergenic | 40.0% | |
| AGTTACTAGTACCTGAAGGA+GGG | + | chr4_1:61406442-61406461 | None:intergenic | 40.0% | |
| AAGTTACTAGTACCTGAAGG+AGG | + | chr4_1:61406443-61406462 | None:intergenic | 40.0% | |
| !! | TTCTAGAATTGACAAGGGCT+TGG | - | chr4_1:61407209-61407228 | Msa0561810:intron | 40.0% |
| AATTGGTCACTAGTGTCTAG+TGG | + | chr4_1:61407254-61407273 | None:intergenic | 40.0% | |
| !!! | TCCACTTTTTGTTTTCCAGG+AGG | - | chr4_1:61407331-61407350 | Msa0561810:intron | 40.0% |
| !!! | CCACTTTTTGTTTTCCAGGA+GGG | - | chr4_1:61407332-61407351 | Msa0561810:intron | 40.0% |
| TCAATGAAAGGAACGTTGCA+GGG | + | chr4_1:61407444-61407463 | None:intergenic | 40.0% | |
| TTCAATGAAAGGAACGTTGC+AGG | + | chr4_1:61407445-61407464 | None:intergenic | 40.0% | |
| TTGGAGATGATTAAAGGTGG+AGG | + | chr4_1:61407713-61407732 | None:intergenic | 40.0% | |
| TAATGGTTACTCTTGCCACT+CGG | - | chr4_1:61407779-61407798 | Msa0561810:intron | 40.0% | |
| ! | CTTTTATAACCTGGTACAGG+AGG | + | chr4_1:61408848-61408867 | None:intergenic | 40.0% |
| ! | AAATGAGGGTATGAGTAAGC+AGG | + | chr4_1:61409485-61409504 | None:intergenic | 40.0% |
| AAGGTATGTTTACCATGACG+TGG | - | chr4_1:61409605-61409624 | Msa0561810:intron | 40.0% | |
| TTACCATGACGTGGTTCAAT+TGG | - | chr4_1:61409614-61409633 | Msa0561810:intron | 40.0% | |
| TACCATGACGTGGTTCAATT+GGG | - | chr4_1:61409615-61409634 | Msa0561810:intron | 40.0% | |
| ! | CATCGATTGCTCCTATATTC+AGG | - | chr4_1:61409653-61409672 | Msa0561810:CDS | 40.0% |
| TTCGCACCGTTAATCGTATA+TGG | + | chr4_1:61409847-61409866 | None:intergenic | 40.0% | |
| GAGAGAGAACAGAAATGGAA+GGG | + | chr4_1:61409973-61409992 | None:intergenic | 40.0% | |
| TGAGAGAGAACAGAAATGGA+AGG | + | chr4_1:61409974-61409993 | None:intergenic | 40.0% | |
| TGCATGAGAGAGAACAGAAA+TGG | + | chr4_1:61409978-61409997 | None:intergenic | 40.0% | |
| TTTCTGTTCTCTCTCATGCA+AGG | - | chr4_1:61409978-61409997 | Msa0561810:intron | 40.0% | |
| !!! | GTTAGTTTTTGTGTTGACGG+TGG | - | chr4_1:61410416-61410435 | Msa0561810:intron | 40.0% |
| !! | TAGTTTTTGTGTTGACGGTG+GGG | - | chr4_1:61410418-61410437 | Msa0561810:intron | 40.0% |
| ! | TTAGGTCTCTTGATGGCTAT+AGG | - | chr4_1:61410673-61410692 | Msa0561810:intron | 40.0% |
| TGATGGCTATAGGAGAAGTT+AGG | - | chr4_1:61410683-61410702 | Msa0561810:intron | 40.0% | |
| TAATAGTGAGTAGTGACCGA+AGG | - | chr4_1:61411047-61411066 | Msa0561810:intron | 40.0% | |
| AATAGTGAGTAGTGACCGAA+GGG | - | chr4_1:61411048-61411067 | Msa0561810:intron | 40.0% | |
| TAACATATGCCCTAACCCTT+AGG | - | chr4_1:61411183-61411202 | Msa0561810:intron | 40.0% | |
| AACATGTGACCTAAGGGTTA+GGG | + | chr4_1:61411195-61411214 | None:intergenic | 40.0% | |
| TAACATGTGACCTAAGGGTT+AGG | + | chr4_1:61411196-61411215 | None:intergenic | 40.0% | |
| TAAACCGAAGATGCTGAAAG+TGG | - | chr4_1:61411332-61411351 | Msa0561810:intron | 40.0% | |
| GTCAGAATCTTGTGGATGTT+TGG | - | chr4_1:61411530-61411549 | Msa0561810:intron | 40.0% | |
| TGGGCAACATTGTCAACTTT+AGG | + | chr4_1:61411571-61411590 | None:intergenic | 40.0% | |
| ! | TACGATTCTCTTTGCTGTGT+TGG | - | chr4_1:61411598-61411617 | Msa0561810:intron | 40.0% |
| TGAATTATCATGGGGTGCAA+TGG | - | chr4_1:61411692-61411711 | Msa0561810:intron | 40.0% | |
| GAATTATCATGGGGTGCAAT+GGG | - | chr4_1:61411693-61411712 | Msa0561810:intron | 40.0% | |
| !! | GGATGCTCTAAGAGTTTGTT+TGG | + | chr4_1:61411814-61411833 | None:intergenic | 40.0% |
| ! | AACTCTTAGAGCATCCACAT+TGG | - | chr4_1:61411818-61411837 | Msa0561810:intron | 40.0% |
| ! | TTAGAGCATCCACATTGGTA+GGG | - | chr4_1:61411823-61411842 | Msa0561810:intron | 40.0% |
| TAGTAAAGACCCTACCAATG+TGG | + | chr4_1:61411835-61411854 | None:intergenic | 40.0% | |
| TCACTTAGACCATCTCCATT+GGG | - | chr4_1:61411927-61411946 | Msa0561810:intron | 40.0% | |
| TAAAACCATCCCAATGGAGA+TGG | + | chr4_1:61411939-61411958 | None:intergenic | 40.0% | |
| ! | TTTAAGACCCGGTACCTATT+AGG | - | chr4_1:61411963-61411982 | Msa0561810:intron | 40.0% |
| TACCTATTAGGTACCCCAAA+TGG | - | chr4_1:61411975-61411994 | Msa0561810:intron | 40.0% | |
| ACCTATTAGGTACCCCAAAT+GGG | - | chr4_1:61411976-61411995 | Msa0561810:intron | 40.0% | |
| !! | TTCAGGGTCTTATTAGACTC+GGG | - | chr4_1:61412009-61412028 | Msa0561810:intron | 40.0% |
| !! | TAAGACCTCCACTTTTAAGC+GGG | - | chr4_1:61412040-61412059 | Msa0561810:intron | 40.0% |
| !! | CAATGGAGACACCCATTTTT+GGG | + | chr4_1:61412248-61412267 | None:intergenic | 40.0% |
| CAAAAATGGGTGTCTCCATT+GGG | - | chr4_1:61412247-61412266 | Msa0561810:intron | 40.0% | |
| AAAAATGGGTGTCTCCATTG+GGG | - | chr4_1:61412248-61412267 | Msa0561810:intron | 40.0% | |
| ATGCTCTTCCCAATCTTAAG+TGG | - | chr4_1:61412271-61412290 | Msa0561810:intron | 40.0% | |
| TGTGAGGTCCACTTAAGATT+GGG | + | chr4_1:61412282-61412301 | None:intergenic | 40.0% | |
| GATCTCCATTGAAGTGGTTA+AGG | - | chr4_1:61412368-61412387 | Msa0561810:intron | 40.0% | |
| GGTCTTAAACAGGTCTCATA+TGG | + | chr4_1:61412429-61412448 | None:intergenic | 40.0% | |
| ! | TCGCATTTGAGGTCTTAAAC+AGG | + | chr4_1:61412439-61412458 | None:intergenic | 40.0% |
| !!! | GTGTTTTAAGCTCTGAGGAT+AGG | + | chr4_1:61412574-61412593 | None:intergenic | 40.0% |
| !! | CATAGGTGTTTTAAGCTCTG+AGG | + | chr4_1:61412579-61412598 | None:intergenic | 40.0% |
| !! | CAGTATTGGTAGGGACAAAT+TGG | + | chr4_1:61412949-61412968 | None:intergenic | 40.0% |
| ATTTGTCCCTACCAATACTG+AGG | - | chr4_1:61412949-61412968 | Msa0561810:CDS | 40.0% | |
| TAGATTAGAGGAGCTCTCTT+AGG | + | chr4_1:61413079-61413098 | None:intergenic | 40.0% | |
| TGACCCATCATCAGAAGCAA+AGG | - | chr4_1:61406245-61406264 | Msa0561810:CDS | 45.0% | |
| GACCCATCATCAGAAGCAAA+GGG | - | chr4_1:61406246-61406265 | Msa0561810:CDS | 45.0% | |
| CTCCCTTTGCTTCTGATGAT+GGG | + | chr4_1:61406251-61406270 | None:intergenic | 45.0% | |
| TCTCCCTTTGCTTCTGATGA+TGG | + | chr4_1:61406252-61406271 | None:intergenic | 45.0% | |
| AGAAACCTGCATGGTTAGAG+AGG | - | chr4_1:61406286-61406305 | Msa0561810:CDS | 45.0% | |
| ! | AGACATTCTTTGGGCGTTGT+GGG | - | chr4_1:61406319-61406338 | Msa0561810:CDS | 45.0% |
| GATGAGAAGAGAGACAGTGA+GGG | + | chr4_1:61406410-61406429 | None:intergenic | 45.0% | |
| GTTACTAGTACCTGAAGGAG+GGG | + | chr4_1:61406441-61406460 | None:intergenic | 45.0% | |
| CCCTCCTGGAAAACAAAAAG+TGG | + | chr4_1:61407335-61407354 | None:intergenic | 45.0% | |
| CAATGAAAGGAACGTTGCAG+GGG | + | chr4_1:61407443-61407462 | None:intergenic | 45.0% | |
| AAAAGAAGGAGGTCTCTCAC+CGG | + | chr4_1:61407841-61407860 | None:intergenic | 45.0% | |
| ! | GAAGGAGTGTGAGAGTTAGA+GGG | + | chr4_1:61409219-61409238 | None:intergenic | 45.0% |
| CTATTGCTGCCATATTGTGC+AGG | - | chr4_1:61409578-61409597 | Msa0561810:intron | 45.0% | |
| ACCTTCTCACCTGCACAATA+TGG | + | chr4_1:61409590-61409609 | None:intergenic | 45.0% | |
| ! | TAAATGAGAGGGTGCAGTCA+AGG | - | chr4_1:61409878-61409897 | Msa0561810:intron | 45.0% |
| CACTTGTGACAGGATTCTTC+AGG | - | chr4_1:61409945-61409964 | Msa0561810:intron | 45.0% | |
| ! | ACCGAAGGGATTTTGTCTCA+AGG | - | chr4_1:61411062-61411081 | Msa0561810:intron | 45.0% |
| GCCTTGAGACAAAATCCCTT+CGG | + | chr4_1:61411066-61411085 | None:intergenic | 45.0% | |
| ! | CTTAGAGCATCCACATTGGT+AGG | - | chr4_1:61411822-61411841 | Msa0561810:intron | 45.0% |
| TTTGGGGGTCTCTTAAGACT+CGG | - | chr4_1:61411900-61411919 | Msa0561810:intron | 45.0% | |
| CTCACTTAGACCATCTCCAT+TGG | - | chr4_1:61411926-61411945 | Msa0561810:intron | 45.0% | |
| TTAGACCATCTCCATTGGGA+TGG | - | chr4_1:61411931-61411950 | Msa0561810:intron | 45.0% | |
| ! | TTGGGGTACCTAATAGGTAC+CGG | + | chr4_1:61411974-61411993 | None:intergenic | 45.0% |
| ! | TCCCATTTGGGGTACCTAAT+AGG | + | chr4_1:61411980-61411999 | None:intergenic | 45.0% |
| !! | TCAGGGTCTTATTAGACTCG+GGG | - | chr4_1:61412010-61412029 | Msa0561810:intron | 45.0% |
| ACTTTGTGTGAGATCTGGGT+TGG | - | chr4_1:61412144-61412163 | Msa0561810:intron | 45.0% | |
| ! | CCAATGGAGACACCCATTTT+TGG | + | chr4_1:61412249-61412268 | None:intergenic | 45.0% |
| CCAAAAATGGGTGTCTCCAT+TGG | - | chr4_1:61412246-61412265 | Msa0561810:intron | 45.0% | |
| GTGTGAGGTCCACTTAAGAT+TGG | + | chr4_1:61412283-61412302 | None:intergenic | 45.0% | |
| CAGGTCCTTAACCACTTCAA+TGG | + | chr4_1:61412376-61412395 | None:intergenic | 45.0% | |
| AAAGGAGACTCTCGCATTTG+AGG | + | chr4_1:61412450-61412469 | None:intergenic | 45.0% | |
| !! | TCAAACCTGAGCATCGACAA+AGG | + | chr4_1:61412468-61412487 | None:intergenic | 45.0% |
| ATTCGCAGTTCGAGGGTTTA+AGG | - | chr4_1:61412888-61412907 | Msa0561810:CDS | 45.0% | |
| TTCGCAGTTCGAGGGTTTAA+GGG | - | chr4_1:61412889-61412908 | Msa0561810:CDS | 45.0% | |
| !! | TAGCCTCCTCAGTATTGGTA+GGG | + | chr4_1:61412958-61412977 | None:intergenic | 45.0% |
| !!! | CCATTGGTTTTGTTGTTGGG+TGG | + | chr4_1:61413019-61413038 | None:intergenic | 45.0% |
| CCACCCAACAACAAAACCAA+TGG | - | chr4_1:61413016-61413035 | Msa0561810:CDS | 45.0% | |
| AAGGGAGAGGAAGAAACCAT+TGG | + | chr4_1:61413035-61413054 | None:intergenic | 45.0% | |
| AATGGTTTCTTCCTCTCCCT+TGG | - | chr4_1:61413034-61413053 | Msa0561810:CDS | 45.0% | |
| TCCCTTGGAAGTAGGAGAAA+GGG | - | chr4_1:61413049-61413068 | Msa0561810:CDS | 45.0% | |
| ACCCTTTCTCCTACTTCCAA+GGG | + | chr4_1:61413053-61413072 | None:intergenic | 45.0% | |
| !! | TTTATAATATTACATAAATA+TGG | + | chr4_1:61407635-61407654 | None:intergenic | 5.0% |
| !!! | TTATTTATTATTATTTTTTC+GGG | - | chr4_1:61407683-61407702 | Msa0561810:intron | 5.0% |
| !!! | AATTAATTTAAATTTTCATT+TGG | + | chr4_1:61407732-61407751 | None:intergenic | 5.0% |
| !!! | AAAATAAATATTTTTGTTAA+GGG | - | chr4_1:61409124-61409143 | Msa0561810:intron | 5.0% |
| !!! | TTTTATTATTTTTTAATAAC+AGG | + | chr4_1:61412395-61412414 | None:intergenic | 5.0% |
| !!! | TAATTTTTTTTTTATTTGAA+TGG | + | chr4_1:61412501-61412520 | None:intergenic | 5.0% |
| !! | CAAATAAAAAAAAAATTATT+AGG | - | chr4_1:61412503-61412522 | Msa0561810:intron | 5.0% |
| ! | GAGACATTCTTTGGGCGTTG+TGG | - | chr4_1:61406318-61406337 | Msa0561810:CDS | 50.0% |
| ! | GACATTCTTTGGGCGTTGTG+GGG | - | chr4_1:61406320-61406339 | Msa0561810:CDS | 50.0% |
| !! | CGTTCTTCCTTTGGTTCTGG+TGG | + | chr4_1:61406347-61406366 | None:intergenic | 50.0% |
| AGAGAGACAGTGAGGGCAAA+TGG | + | chr4_1:61406403-61406422 | None:intergenic | 50.0% | |
| GGATGAGAAGAGAGACAGTG+AGG | + | chr4_1:61406411-61406430 | None:intergenic | 50.0% | |
| TCACTAGTGTCTAGTGGTGG+TGG | + | chr4_1:61407248-61407267 | None:intergenic | 50.0% | |
| TGGTCACTAGTGTCTAGTGG+TGG | + | chr4_1:61407251-61407270 | None:intergenic | 50.0% | |
| AGGAACGTTGCAGGGGAAAT+TGG | + | chr4_1:61407436-61407455 | None:intergenic | 50.0% | |
| TTACTCTTGCCACTCGGCAA+AGG | - | chr4_1:61407785-61407804 | Msa0561810:intron | 50.0% | |
| GACCTTGATAGGTCTCCTAC+CGG | - | chr4_1:61407819-61407838 | Msa0561810:intron | 50.0% | |
| AAATGAGGTCTCTCACCGGT+AGG | - | chr4_1:61408790-61408809 | Msa0561810:intron | 50.0% | |
| GACCTTGATAGGTCTCCTAC+CGG | + | chr4_1:61407819-61407838 | None:intergenic | 50.0% | |
| ! | GGAAGGAGTGTGAGAGTTAG+AGG | + | chr4_1:61409220-61409239 | None:intergenic | 50.0% |
| GCCATATTGTGCAGGTGAGA+AGG | - | chr4_1:61409586-61409605 | Msa0561810:intron | 50.0% | |
| CACCCAATTGAACCACGTCA+TGG | + | chr4_1:61409620-61409639 | None:intergenic | 50.0% | |
| GTGCAGTCAAGGTCATGCAA+AGG | - | chr4_1:61409889-61409908 | Msa0561810:intron | 50.0% | |
| AGTGCAGCAAGAGTTGGCAT+TGG | + | chr4_1:61409929-61409948 | None:intergenic | 50.0% | |
| GTCACAAGTGCAGCAAGAGT+TGG | + | chr4_1:61409935-61409954 | None:intergenic | 50.0% | |
| ACTCTTGCTGCACTTGTGAC+AGG | - | chr4_1:61409935-61409954 | Msa0561810:intron | 50.0% | |
| TTGGGGGTCTCTTAAGACTC+GGG | - | chr4_1:61411901-61411920 | Msa0561810:intron | 50.0% | |
| ! | TGGGGTACCTAATAGGTACC+GGG | + | chr4_1:61411973-61411992 | None:intergenic | 50.0% |
| !! | ATTGGGAAGAGCATCCCCAA+TGG | + | chr4_1:61412265-61412284 | None:intergenic | 50.0% |
| AGTCTCCTTTGTCGATGCTC+AGG | - | chr4_1:61412460-61412479 | Msa0561810:intron | 50.0% | |
| !! | AAGCTCTGAGGATAGGCTAG+CGG | + | chr4_1:61412567-61412586 | None:intergenic | 50.0% |
| TGTCCCTACCAATACTGAGG+AGG | - | chr4_1:61412952-61412971 | Msa0561810:CDS | 50.0% | |
| !! | GTAGCCTCCTCAGTATTGGT+AGG | + | chr4_1:61412959-61412978 | None:intergenic | 50.0% |
| GCTTGTAGCCTCCTCAGTAT+TGG | + | chr4_1:61412963-61412982 | None:intergenic | 50.0% | |
| TCTTCCTCTCCCTTGGAAGT+AGG | - | chr4_1:61413041-61413060 | Msa0561810:CDS | 50.0% | |
| TTCTCCTACTTCCAAGGGAG+AGG | + | chr4_1:61413048-61413067 | None:intergenic | 50.0% | |
| CTCCCTTGGAAGTAGGAGAA+AGG | - | chr4_1:61413048-61413067 | Msa0561810:CDS | 50.0% | |
| CACCCTTTCTCCTACTTCCA+AGG | + | chr4_1:61413054-61413073 | None:intergenic | 50.0% | |
| ACCTGAAGGAGGGGATGAGA+GGG | + | chr4_1:61406432-61406451 | None:intergenic | 55.0% | |
| TACCTGAAGGAGGGGATGAG+AGG | + | chr4_1:61406433-61406452 | None:intergenic | 55.0% | |
| CAAGACATGGTGAACCCTCC+TGG | + | chr4_1:61407349-61407368 | None:intergenic | 55.0% | |
| TTGCCACTCGGCAAAGGCTA+CGG | - | chr4_1:61407791-61407810 | Msa0561810:intron | 55.0% | |
| CTACGGTGGGAGACCTTGAT+AGG | - | chr4_1:61407808-61407827 | Msa0561810:intron | 55.0% | |
| CACCGGTAGGAGACCTATCA+AGG | + | chr4_1:61408803-61408822 | None:intergenic | 55.0% | |
| CACCGGTAGGAGACCTATCA+AGG | - | chr4_1:61408803-61408822 | Msa0561810:intron | 55.0% | |
| CTACGGTGGGAGACCTTGAT+AGG | + | chr4_1:61407808-61407827 | None:intergenic | 55.0% | |
| TCAAGGTCTCCCACCGTAGA+CGG | - | chr4_1:61408820-61408839 | Msa0561810:intron | 55.0% | |
| TGGGGGTCTCTTAAGACTCG+GGG | - | chr4_1:61411902-61411921 | Msa0561810:intron | 55.0% | |
| TGGGTCCCGCTTAAAAGTGG+AGG | + | chr4_1:61412048-61412067 | None:intergenic | 55.0% | |
| GTGTGGGTCCCGCTTAAAAG+TGG | + | chr4_1:61412051-61412070 | None:intergenic | 55.0% | |
| GTGGGGTCCACCAGAACCAA+AGG | - | chr4_1:61406337-61406356 | Msa0561810:CDS | 60.0% | |
| TCCCTCTCATCCCCTCCTTC+AGG | - | chr4_1:61406428-61406447 | Msa0561810:CDS | 60.0% | |
| CACTCGGCAAAGGCTACGGT+GGG | - | chr4_1:61407795-61407814 | Msa0561810:intron | 60.0% | |
| GAAGGAGGTCTCTCACCGGT+AGG | + | chr4_1:61407837-61407856 | None:intergenic | 60.0% | |
| TCTGAGGATAGGCTAGCGGC+TGG | + | chr4_1:61412563-61412582 | None:intergenic | 60.0% | |
| CCACCGTAGCCTTTGCCGAG+TGG | + | chr4_1:61407797-61407816 | None:intergenic | 65.0% | |
| CCACTCGGCAAAGGCTACGG+TGG | - | chr4_1:61407794-61407813 | Msa0561810:intron | 65.0% | |
| !! | GGTACAGGAGGCGCCGTCTA+CGG | + | chr4_1:61408836-61408855 | None:intergenic | 65.0% |
| TAGACGGCGCCTCCTGTACC+AGG | - | chr4_1:61408836-61408855 | Msa0561810:intron | 65.0% | |
| !! | CAGGAGGCGCCGTCTACGGT+GGG | + | chr4_1:61408832-61408851 | None:intergenic | 70.0% |
| !! | ACAGGAGGCGCCGTCTACGG+TGG | + | chr4_1:61408833-61408852 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 61406228 | 61413099 | 61406228 | ID=Msa0561810;Name=Msa0561810 |
| chr4_1 | mRNA | 61406228 | 61413099 | 61406228 | ID=Msa0561810-mRNA-1;Parent=Msa0561810;Name=Msa0561810-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|4|0|245 |
| chr4_1 | exon | 61412878 | 61413099 | 61412878 | ID=Msa0561810-mRNA-1:exon:19314;Parent=Msa0561810-mRNA-1 |
| chr4_1 | exon | 61409653 | 61409727 | 61409653 | ID=Msa0561810-mRNA-1:exon:19313;Parent=Msa0561810-mRNA-1 |
| chr4_1 | exon | 61409328 | 61409483 | 61409328 | ID=Msa0561810-mRNA-1:exon:19312;Parent=Msa0561810-mRNA-1 |
| chr4_1 | exon | 61406228 | 61406512 | 61406228 | ID=Msa0561810-mRNA-1:exon:19311;Parent=Msa0561810-mRNA-1 |
| chr4_1 | CDS | 61412878 | 61413099 | 61412878 | ID=Msa0561810-mRNA-1:cds;Parent=Msa0561810-mRNA-1 |
| chr4_1 | CDS | 61409653 | 61409727 | 61409653 | ID=Msa0561810-mRNA-1:cds;Parent=Msa0561810-mRNA-1 |
| chr4_1 | CDS | 61409328 | 61409483 | 61409328 | ID=Msa0561810-mRNA-1:cds;Parent=Msa0561810-mRNA-1 |
| chr4_1 | CDS | 61406228 | 61406512 | 61406228 | ID=Msa0561810-mRNA-1:cds;Parent=Msa0561810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
