AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0563210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0563210 MtrunA17_Chr8g0377071 93.042 733 25 2 1 709 1 731 0.0 1295
Msa0563210 MtrunA17_Chr3g0122781 63.462 780 201 13 1 704 1 772 0.0 834
Msa0563210 MtrunA17_Chr4g0057791 65.337 326 86 4 372 671 203 527 1.41e-136 412
Msa0563210 MtrunA17_Chr2g0293491 43.189 301 133 6 384 657 1 290 3.30e-75 244
Msa0563210 MtrunA17_Chr4g0051261 43.046 302 132 7 384 657 1 290 6.40e-75 243
Msa0563210 MtrunA17_Chr3g0093571 39.244 344 159 7 379 681 17 351 3.07e-69 235
Msa0563210 MtrunA17_Chr3g0093391 39.244 344 159 7 379 681 15 349 6.55e-69 234
Msa0563210 MtrunA17_Chr1g0187371 39.688 320 150 8 370 657 3 311 2.40e-67 224
Msa0563210 MtrunA17_Chr4g0002001 38.535 314 139 6 384 654 1 303 6.76e-61 206
Msa0563210 MtrunA17_Chr6g0483151 37.217 309 161 5 382 667 9 307 2.16e-59 206
Msa0563210 MtrunA17_Chr2g0286421 38.769 325 164 7 382 680 97 412 5.01e-59 208
Msa0563210 MtrunA17_Chr3g0130781 35.714 336 165 8 384 672 15 346 5.19e-59 206
Msa0563210 MtrunA17_Chr4g0040141 37.231 325 169 7 382 680 124 439 2.38e-58 209
Msa0563210 MtrunA17_Chr2g0317501 37.607 351 172 9 382 706 129 458 8.60e-58 208
Msa0563210 MtrunA17_Chr3g0131861 37.861 346 172 8 382 701 92 420 1.61e-57 204
Msa0563210 MtrunA17_Chr4g0066691 38.769 325 164 8 382 680 99 414 1.99e-57 204
Msa0563210 MtrunA17_Chr8g0385971 36.416 346 177 8 382 701 85 413 9.74e-56 199
Msa0563210 MtrunA17_Chr7g0273601 37.846 325 167 8 382 680 102 417 4.36e-55 198
Msa0563210 MtrunA17_Chr5g0396361 37.195 328 165 5 382 680 135 450 2.06e-54 197
Msa0563210 MtrunA17_Chr4g0061141 35.952 331 169 9 385 682 103 423 9.30e-54 196
Msa0563210 MtrunA17_Chr3g0099951 35.016 317 162 7 381 667 7 309 1.30e-52 187
Msa0563210 MtrunA17_Chr6g0453711 36.012 336 168 9 367 669 88 409 3.25e-52 191
Msa0563210 MtrunA17_Chr7g0218071 34.557 327 172 6 384 680 117 431 4.23e-52 192
Msa0563210 MtrunA17_Chr1g0191221 36.810 326 169 9 382 680 117 432 2.00e-50 185
Msa0563210 MtrunA17_Chr2g0324461 33.621 348 184 7 382 703 136 462 6.58e-50 186
Msa0563210 MtrunA17_Chr5g0409421 36.545 301 149 9 384 657 1 286 4.69e-46 170
Msa0563210 MtrunA17_Chr8g0369451 35.216 301 153 8 384 657 1 286 1.95e-45 168
Msa0563210 MtrunA17_Chr8g0358921 31.132 318 181 5 369 657 30 338 1.08e-43 160
Msa0563210 MtrunA17_Chr8g0339221 34.333 300 154 9 384 655 1 285 1.71e-41 157
Msa0563210 MtrunA17_Chr8g0378831 34.000 300 154 7 390 657 35 322 7.74e-41 153
Msa0563210 MtrunA17_Chr1g0201571 35.776 232 124 2 381 587 120 351 2.90e-40 156
Msa0563210 MtrunA17_Chr4g0030231 34.247 292 157 8 390 654 43 326 1.11e-38 147
Msa0563210 MtrunA17_Chr3g0141871 31.818 330 184 8 366 662 6 327 1.08e-37 144
Msa0563210 MtrunA17_Chr8g0387401 31.940 335 182 10 393 689 58 384 2.65e-37 144
Msa0563210 MtrunA17_Chr8g0383451 36.239 218 112 4 393 584 4 220 1.32e-36 143
Msa0563210 MtrunA17_Chr8g0350311 28.729 362 178 13 370 682 132 462 2.89e-35 139
Msa0563210 MtrunA17_Chr8g0359091 35.548 301 158 7 385 655 24 318 3.04e-35 141
Msa0563210 MtrunA17_Chr4g0045841 31.741 293 156 7 393 654 61 340 8.08e-35 136
Msa0563210 MtrunA17_Chr4g0065851 34.247 292 156 6 393 654 31 316 1.31e-34 139
Msa0563210 MtrunA17_Chr5g0397261 31.503 346 173 11 390 688 44 372 1.90e-34 135
Msa0563210 MtrunA17_Chr7g0248461 31.488 289 163 7 393 654 44 324 2.07e-34 135
Msa0563210 MtrunA17_Chr8g0348481 30.690 290 164 7 393 654 43 323 2.23e-34 135
Msa0563210 MtrunA17_Chr7g0246591 29.395 347 165 16 369 669 133 445 1.56e-33 134
Msa0563210 MtrunA17_Chr1g0193081 29.118 340 166 14 369 668 67 371 3.20e-33 132
Msa0563210 MtrunA17_Chr8g0392811 33.333 294 158 6 393 655 123 409 5.97e-33 134
Msa0563210 MtrunA17_Chr2g0287271 34.694 294 154 7 393 655 31 317 1.41e-32 133
Msa0563210 MtrunA17_Chr2g0284091 29.938 324 155 14 393 669 46 344 2.71e-32 129
Msa0563210 MtrunA17_Chr2g0320011 26.166 386 202 15 318 663 39 381 4.47e-32 129
Msa0563210 MtrunA17_Chr1g0194201 28.986 345 167 14 370 669 68 379 5.91e-32 129
Msa0563210 MtrunA17_Chr5g0443351 35.616 292 152 6 393 654 28 313 6.76e-32 130
Msa0563210 MtrunA17_Chr7g0270371 29.240 342 165 14 370 667 68 376 6.87e-32 128
Msa0563210 MtrunA17_Chr4g0030151 30.303 297 162 7 393 657 45 328 3.15e-31 125
Msa0563210 MtrunA17_Chr6g0482681 35.714 294 149 8 393 654 95 380 5.96e-31 128
Msa0563210 MtrunA17_Chr2g0277011 29.102 323 159 12 393 669 96 394 2.40e-30 124
Msa0563210 MtrunA17_Chr3g0096631 35.135 296 150 8 393 655 31 317 3.82e-30 126
Msa0563210 MtrunA17_Chr2g0314321 32.704 318 161 8 385 655 23 334 8.20e-30 125
Msa0563210 MtrunA17_Chr8g0390341 41.844 141 76 1 520 660 285 419 1.05e-25 111
Msa0563210 MtrunA17_Chr6g0486031 37.748 151 86 3 520 668 272 416 8.35e-25 107
Msa0563210 MtrunA17_Chr3g0102571 39.264 163 84 4 499 657 218 369 1.00e-24 107
Msa0563210 MtrunA17_Chr4g0030241 56.471 85 36 1 500 584 40 123 1.90e-24 100
Msa0563210 MtrunA17_Chr4g0053821 33.831 201 114 8 467 657 186 377 7.24e-20 92.4
Msa0563210 MtrunA17_Chr8g0360761 31.197 234 104 8 422 655 9 185 1.62e-19 87.0
Msa0563210 MtrunA17_Chr8g0369241 30.942 223 111 7 393 580 145 359 8.69e-19 91.3
Msa0563210 MtrunA17_Chr3g0102601 29.565 230 105 7 456 657 7 207 2.06e-18 85.5
Msa0563210 MtrunA17_Chr5g0401371 32.353 204 119 8 464 657 209 403 4.43e-18 87.4
Msa0563210 MtrunA17_Chr4g0053951 31.905 210 112 9 464 657 214 408 2.40e-17 85.1
Msa0563210 MtrunA17_Chr1g0203881 27.632 304 151 12 385 658 39 303 9.38e-15 77.8
Msa0563210 MtrunA17_Chr8g0384301 23.701 308 156 12 383 656 295 557 1.15e-14 77.8
Msa0563210 MtrunA17_Chr8g0345801 26.126 222 133 7 382 576 10 227 1.59e-14 74.3
Msa0563210 MtrunA17_Chr3g0130151 24.752 303 151 12 387 656 244 502 3.13e-14 76.3
Msa0563210 MtrunA17_Chr1g0202831 23.256 344 181 14 343 655 377 668 7.43e-14 75.5
Msa0563210 MtrunA17_Chr1g0173921 24.436 266 162 7 384 623 1 253 2.89e-13 73.6
Msa0563210 MtrunA17_Chr4g0038501 27.602 221 130 6 391 586 24 239 3.00e-13 73.6
Msa0563210 MtrunA17_Chr5g0437131 33.140 172 100 7 495 657 543 708 3.43e-13 73.2
Msa0563210 MtrunA17_Chr3g0133541 27.574 272 140 14 357 579 264 527 3.85e-13 72.8
Msa0563210 MtrunA17_Chr3g0139371 26.667 330 177 12 387 655 74 399 4.49e-13 71.6
Msa0563210 MtrunA17_Chr5g0419441 22.115 312 166 10 386 665 238 504 7.09e-13 72.4
Msa0563210 MtrunA17_Chr6g0480541 31.765 170 99 6 495 654 1038 1200 7.97e-13 72.4
Msa0563210 MtrunA17_Chr2g0317001 24.876 201 120 5 387 561 15 210 1.46e-12 71.2
Msa0563210 MtrunA17_Chr8g0353621 24.497 298 155 8 383 653 6 260 1.87e-12 68.2
Msa0563210 MtrunA17_Chr4g0027671 32.941 170 99 5 500 658 317 482 4.97e-12 68.9
Msa0563210 MtrunA17_Chr5g0405421 27.365 296 144 14 393 656 105 361 9.17e-12 68.2
Msa0563210 MtrunA17_Chr1g0170551 27.149 221 129 6 383 577 3 217 1.89e-11 67.8
Msa0563210 MtrunA17_Chr4g0001331 26.159 302 148 11 385 655 18 275 3.32e-11 66.2
Msa0563210 MtrunA17_Chr4g0039141 48.438 64 32 1 378 441 94 156 5.77e-11 62.4
Msa0563210 MtrunA17_Chr1g0205421 28.431 204 114 7 384 559 9 208 7.67e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0563210 AT1G67580.1 59.818 769 232 19 1 709 1 752 0.0 797
Msa0563210 AT1G67580.2 59.818 769 232 19 1 709 1 752 0.0 797
Msa0563210 AT5G63370.7 46.048 582 221 14 130 670 80 609 3.80e-146 440
Msa0563210 AT5G63370.8 46.048 582 221 14 130 670 80 609 3.80e-146 440
Msa0563210 AT5G63370.4 46.048 582 221 14 130 670 80 609 3.80e-146 440
Msa0563210 AT5G63370.6 46.048 582 221 14 130 670 80 609 3.80e-146 440
Msa0563210 AT5G63370.1 46.048 582 221 14 130 670 80 609 3.80e-146 440
Msa0563210 AT5G63370.2 51.392 467 158 9 234 670 48 475 6.02e-144 429
Msa0563210 AT5G63370.3 51.392 467 158 9 234 670 48 475 6.02e-144 429
Msa0563210 AT5G63370.5 42.692 520 205 14 130 608 80 547 3.87e-109 342
Msa0563210 AT5G63370.10 42.692 520 205 14 130 608 80 547 3.87e-109 342
Msa0563210 AT5G63370.9 47.901 405 142 9 234 608 48 413 1.14e-106 331
Msa0563210 AT3G48750.1 44.186 301 130 5 384 657 1 290 2.55e-74 242
Msa0563210 AT1G20930.1 43.182 308 134 7 383 658 12 310 2.19e-73 240
Msa0563210 AT5G64960.1 40.580 345 155 6 378 681 17 352 3.84e-73 246
Msa0563210 AT5G10270.1 39.459 370 165 9 378 702 17 372 5.62e-73 245
Msa0563210 AT1G76540.1 40.909 308 141 6 383 658 10 308 2.39e-71 235
Msa0563210 AT2G38620.2 39.423 312 139 5 384 654 1 303 7.10e-64 215
Msa0563210 AT1G18040.1 36.624 314 162 5 379 667 4 305 1.52e-63 217
Msa0563210 AT1G73690.1 37.864 309 155 5 377 660 1 297 3.65e-63 216
Msa0563210 AT1G66750.1 39.735 302 145 5 384 660 10 299 2.73e-62 212
Msa0563210 AT3G54180.1 39.550 311 138 6 384 654 1 301 4.79e-61 207
Msa0563210 AT5G50860.2 37.465 355 175 10 382 709 109 443 1.81e-58 206
Msa0563210 AT1G71530.2 38.532 327 162 7 382 680 142 457 2.60e-58 204
Msa0563210 AT5G50860.1 37.465 355 175 10 382 709 109 443 5.35e-58 207
Msa0563210 AT1G71530.1 38.532 327 162 7 382 680 142 457 5.63e-58 208
Msa0563210 AT1G53050.2 39.385 325 162 8 382 680 129 444 7.39e-58 209
Msa0563210 AT1G53050.1 39.385 325 162 8 382 680 129 444 7.39e-58 209
Msa0563210 AT5G63610.1 36.119 335 163 8 384 672 22 351 5.90e-56 198
Msa0563210 AT3G01085.3 34.294 347 192 6 384 703 112 449 1.41e-55 201
Msa0563210 AT3G01085.1 34.294 347 192 6 384 703 112 449 1.56e-55 201
Msa0563210 AT3G01085.2 34.294 347 192 6 384 703 112 449 1.56e-55 201
Msa0563210 AT4G10010.2 37.318 343 168 9 382 696 151 474 4.48e-55 200
Msa0563210 AT1G54610.1 37.006 354 174 8 382 706 113 446 6.88e-55 198
Msa0563210 AT1G54610.3 37.006 354 174 8 382 706 113 446 6.88e-55 198
Msa0563210 AT1G54610.2 37.006 354 174 8 382 706 113 446 6.88e-55 198
Msa0563210 AT1G18670.2 37.048 332 167 9 385 682 129 452 1.54e-53 196
Msa0563210 AT5G39420.1 35.714 322 174 4 384 680 102 415 1.62e-53 196
Msa0563210 AT2G38620.4 39.338 272 133 5 384 654 1 241 1.80e-53 185
Msa0563210 AT1G74330.3 37.846 325 163 8 385 680 119 433 2.70e-53 195
Msa0563210 AT1G18670.1 37.048 332 167 9 385 682 129 452 3.27e-53 196
Msa0563210 AT1G18670.3 37.048 332 167 9 385 682 129 452 4.77e-53 196
Msa0563210 AT1G74330.2 37.846 325 163 8 385 680 119 433 7.07e-53 194
Msa0563210 AT1G74330.1 37.846 325 163 8 385 680 119 433 8.58e-53 194
Msa0563210 AT1G71530.3 39.465 299 142 7 382 652 142 429 1.63e-52 188
Msa0563210 AT1G09600.1 36.422 313 166 6 382 669 158 462 1.71e-52 194
Msa0563210 AT1G33770.1 37.003 327 167 7 382 680 136 451 2.79e-52 191
Msa0563210 AT1G03740.2 35.632 348 177 11 382 696 208 541 2.57e-50 187
Msa0563210 AT1G03740.1 35.632 348 177 11 382 696 208 541 4.02e-50 187
Msa0563210 AT5G64960.2 36.824 296 137 6 427 681 13 299 4.25e-50 182
Msa0563210 AT1G57700.1 35.860 343 173 9 382 696 141 464 6.24e-50 186
Msa0563210 AT5G44290.7 33.811 349 186 8 382 699 132 466 1.37e-49 182
Msa0563210 AT5G44290.2 33.621 348 188 6 382 699 132 466 1.65e-49 184
Msa0563210 AT5G44290.5 33.621 348 188 6 382 699 132 466 1.65e-49 184
Msa0563210 AT5G44290.4 33.621 348 188 6 382 699 132 466 1.65e-49 184
Msa0563210 AT5G44290.1 33.621 348 188 6 382 699 132 466 1.65e-49 184
Msa0563210 AT5G44290.3 33.621 348 188 6 382 699 132 466 1.65e-49 184
Msa0563210 AT5G44290.6 33.811 349 186 8 382 699 132 466 2.63e-49 183
Msa0563210 AT4G19110.1 35.906 298 155 9 384 657 1 286 9.32e-48 176
Msa0563210 AT4G19110.2 35.906 298 155 9 384 657 1 286 9.71e-48 176
Msa0563210 AT2G38620.3 40.084 237 101 4 384 579 1 237 3.68e-47 168
Msa0563210 AT2G38620.1 40.084 237 101 4 384 579 1 237 3.68e-47 168
Msa0563210 AT4G13020.7 35.932 295 153 8 384 654 1 283 1.66e-46 169
Msa0563210 AT4G13020.4 35.932 295 153 8 384 654 1 283 2.36e-46 170
Msa0563210 AT4G13020.6 35.932 295 153 8 384 654 1 283 3.46e-46 169
Msa0563210 AT4G13020.1 35.932 295 153 8 384 654 1 283 4.11e-46 170
Msa0563210 AT4G13020.2 36.242 298 150 9 381 654 10 291 1.25e-45 169
Msa0563210 AT4G13020.3 36.242 298 150 9 381 654 10 291 1.27e-45 169
Msa0563210 AT3G05050.3 34.473 351 187 10 382 703 133 469 1.22e-44 169
Msa0563210 AT3G05050.2 34.473 351 187 10 382 703 133 469 1.22e-44 169
Msa0563210 AT3G05050.1 34.473 351 187 10 382 703 133 469 1.22e-44 169
Msa0563210 AT4G13020.8 34.628 309 147 10 384 654 1 292 3.98e-44 163
Msa0563210 AT5G45430.2 34.448 299 158 9 384 657 1 286 4.48e-44 166
Msa0563210 AT5G45430.1 34.448 299 158 9 384 657 1 286 5.64e-44 166
Msa0563210 AT4G10010.1 35.783 313 154 9 412 696 1 294 7.63e-44 164
Msa0563210 AT4G13020.5 34.628 309 147 10 384 654 1 292 9.22e-44 164
Msa0563210 AT1G71530.4 41.395 215 95 4 382 568 142 353 1.15e-40 153
Msa0563210 AT4G22940.2 33.232 328 171 9 386 680 102 414 3.42e-40 156
Msa0563210 AT4G22940.1 33.232 328 171 9 386 680 102 414 3.88e-40 154
Msa0563210 AT3G59790.1 34.256 289 154 7 393 654 66 345 2.29e-38 147
Msa0563210 AT3G45640.1 32.534 292 162 7 393 657 44 327 5.67e-38 145
Msa0563210 AT4G01370.1 32.534 292 162 7 390 654 46 329 5.33e-37 143
Msa0563210 AT4G11330.1 32.313 294 154 7 393 654 49 329 4.04e-36 140
Msa0563210 AT1G59580.2 32.492 317 171 8 370 654 14 319 7.47e-36 139
Msa0563210 AT1G59580.1 32.492 317 171 8 370 654 14 319 7.47e-36 139
Msa0563210 AT1G10210.2 32.903 310 165 8 377 654 21 319 1.61e-35 138
Msa0563210 AT1G10210.3 32.903 310 165 8 377 654 21 319 1.61e-35 138
Msa0563210 AT1G10210.1 32.903 310 165 8 377 654 21 319 1.61e-35 138
Msa0563210 AT4G19110.3 35.270 241 121 8 441 657 1 230 4.49e-35 138
Msa0563210 AT2G43790.1 31.399 293 163 6 393 657 69 351 9.35e-35 137
Msa0563210 AT2G18170.1 30.675 326 177 8 366 654 6 319 1.11e-34 136
Msa0563210 AT2G46070.1 31.034 290 163 7 393 654 47 327 2.27e-34 135
Msa0563210 AT2G46070.3 31.034 290 163 7 393 654 81 361 2.71e-34 135
Msa0563210 AT4G36450.1 32.313 294 152 9 393 654 38 316 3.22e-34 134
Msa0563210 AT5G19010.1 35.374 294 152 7 393 655 31 317 3.56e-34 138
Msa0563210 AT1G01560.2 31.507 292 165 7 390 654 43 326 3.26e-33 132
Msa0563210 AT1G07880.2 31.987 297 151 7 393 654 39 319 3.80e-33 131
Msa0563210 AT3G14720.1 35.430 302 157 8 385 655 23 317 3.90e-33 135
Msa0563210 AT4G00720.1 31.269 323 152 14 393 669 144 442 9.71e-33 132
Msa0563210 AT4G18710.1 30.124 322 157 12 393 669 46 344 2.00e-32 130
Msa0563210 AT3G61160.1 30.312 320 159 11 393 669 108 406 3.14e-32 130
Msa0563210 AT3G61160.2 30.312 320 159 11 393 669 115 413 3.52e-32 130
Msa0563210 AT3G14720.2 35.430 302 157 8 385 655 23 317 4.17e-32 130
Msa0563210 AT3G14720.3 35.430 302 157 8 385 655 23 317 4.17e-32 130
Msa0563210 AT1G57870.1 30.606 330 145 14 393 669 88 386 4.74e-32 129
Msa0563210 AT1G57870.4 30.606 330 145 14 393 669 88 386 4.74e-32 129
Msa0563210 AT1G57870.2 30.606 330 145 14 393 669 88 386 4.74e-32 129
Msa0563210 AT3G61160.4 30.312 320 159 11 393 669 108 406 5.82e-32 129
Msa0563210 AT1G57870.3 30.721 319 142 13 393 663 88 375 8.41e-32 129
Msa0563210 AT2G46070.2 31.071 280 156 7 393 644 47 317 1.10e-31 126
Msa0563210 AT1G53510.1 34.653 303 160 8 384 655 22 317 1.25e-31 131
Msa0563210 AT1G73670.1 33.447 293 157 7 393 654 96 381 1.33e-31 130
Msa0563210 AT1G06390.2 29.260 311 157 11 393 663 76 363 1.43e-31 128
Msa0563210 AT1G06390.1 29.260 311 157 11 393 663 76 363 1.43e-31 128
Msa0563210 AT1G01560.3 31.579 285 160 7 390 647 43 319 2.83e-31 125
Msa0563210 AT3G05840.2 28.363 342 168 14 370 667 66 374 3.61e-31 127
Msa0563210 AT3G05840.1 28.363 342 168 14 370 667 66 374 3.61e-31 127
Msa0563210 AT1G09840.3 29.156 391 200 17 330 669 23 387 3.81e-31 127
Msa0563210 AT1G09840.7 29.156 391 200 17 330 669 23 387 3.81e-31 127
Msa0563210 AT1G09840.10 29.156 391 200 17 330 669 23 387 3.81e-31 127
Msa0563210 AT1G09840.6 29.156 391 200 17 330 669 23 387 3.81e-31 127
Msa0563210 AT1G09840.4 29.156 391 200 17 330 669 23 387 3.81e-31 127
Msa0563210 AT1G09840.1 29.156 391 200 17 330 669 23 387 3.81e-31 127
Msa0563210 AT1G09840.9 29.156 391 200 17 330 669 23 387 3.81e-31 127
Msa0563210 AT1G09840.5 29.156 391 200 17 330 669 23 387 3.81e-31 127
Msa0563210 AT1G09840.8 29.156 391 200 17 330 669 23 387 3.81e-31 127
Msa0563210 AT1G09840.2 29.156 391 200 17 330 669 23 387 3.81e-31 127
Msa0563210 AT2G30980.1 28.479 309 162 10 393 663 78 365 1.28e-30 125
Msa0563210 AT5G14640.1 27.826 345 171 15 370 669 67 378 1.65e-30 125
Msa0563210 AT5G14640.2 27.826 345 171 15 370 669 67 378 1.65e-30 125
Msa0563210 AT5G26751.1 28.280 343 169 14 369 667 61 370 1.89e-30 124
Msa0563210 AT2G01450.3 32.423 293 162 6 393 655 22 308 2.05e-30 126
Msa0563210 AT2G01450.1 32.423 293 162 6 393 655 22 308 2.05e-30 126
Msa0563210 AT2G01450.2 32.423 293 162 6 393 655 22 308 2.05e-30 126
Msa0563210 AT2G01450.4 32.423 293 162 6 393 655 22 308 2.05e-30 126
Msa0563210 AT2G42880.1 35.154 293 154 7 393 655 31 317 3.29e-30 127
Msa0563210 AT2G42880.2 35.154 293 154 7 393 655 31 317 3.56e-30 125
Msa0563210 AT3G61160.5 30.928 291 142 10 393 645 108 377 6.11e-30 122
Msa0563210 AT3G18040.1 35.154 293 152 8 393 654 29 314 1.04e-28 121
Msa0563210 AT3G18040.4 35.374 294 150 9 393 654 138 423 1.10e-28 122
Msa0563210 AT3G18040.5 35.154 293 152 8 393 654 24 309 1.30e-28 120
Msa0563210 AT1G18150.3 35.154 293 152 8 393 654 110 395 2.83e-28 120
Msa0563210 AT1G18150.2 35.154 293 152 8 393 654 110 395 2.83e-28 120
Msa0563210 AT1G18150.1 35.154 293 152 8 393 654 110 395 2.83e-28 120
Msa0563210 AT3G18040.3 35.374 294 150 9 393 654 138 423 3.84e-28 120
Msa0563210 AT4G18710.2 33.482 224 106 7 393 582 40 254 4.47e-28 114
Msa0563210 AT3G61160.3 33.784 222 108 6 393 582 108 322 6.64e-28 116
Msa0563210 AT3G61160.6 33.784 222 108 6 393 582 115 329 8.71e-28 115
Msa0563210 AT4G28980.3 42.657 143 72 4 520 660 290 424 5.35e-26 112
Msa0563210 AT4G28980.1 42.657 143 72 4 520 660 290 424 5.35e-26 112
Msa0563210 AT4G28980.2 42.657 143 72 4 520 660 290 424 5.35e-26 112
Msa0563210 AT1G07880.1 33.971 209 111 4 393 575 39 246 6.63e-26 107
Msa0563210 AT1G09840.11 36.702 188 81 8 500 667 95 264 1.28e-24 105
Msa0563210 AT1G01560.4 32.394 213 115 4 390 575 43 253 4.00e-23 100
Msa0563210 AT1G01560.1 32.394 213 115 4 390 575 43 253 4.00e-23 100
Msa0563210 AT5G67380.1 33.831 201 114 8 467 657 207 398 4.21e-20 94.0
Msa0563210 AT5G67380.2 33.831 201 114 8 467 657 174 365 4.36e-20 93.2
Msa0563210 AT2G23080.1 32.524 206 120 7 467 662 131 327 2.04e-19 90.5
Msa0563210 AT3G50000.1 33.333 201 115 8 467 657 201 392 2.42e-18 88.6
Msa0563210 AT3G18040.2 36.269 193 111 6 467 654 41 226 1.11e-17 86.7
Msa0563210 AT5G35980.3 30.769 221 113 7 393 580 93 306 2.61e-17 87.0
Msa0563210 AT5G35980.1 30.769 221 113 7 393 580 128 341 2.69e-17 87.0
Msa0563210 AT2G23070.1 33.929 168 85 7 500 654 263 417 3.28e-17 85.1
Msa0563210 AT5G35980.2 30.769 221 113 7 393 580 128 341 5.78e-17 85.9
Msa0563210 AT2G17890.1 27.609 297 142 12 393 656 114 370 1.98e-14 77.4
Msa0563210 AT5G12480.1 26.207 290 151 10 392 654 64 317 4.88e-14 75.9
Msa0563210 AT2G45490.1 25.490 306 158 9 383 661 18 280 5.09e-14 73.6
Msa0563210 AT2G23080.2 38.655 119 66 4 467 581 131 246 7.56e-14 73.6
Msa0563210 AT3G13530.1 27.386 241 144 7 372 586 4 239 9.02e-14 75.9
Msa0563210 AT5G25110.1 28.239 301 129 11 393 656 49 299 2.48e-13 73.6
Msa0563210 AT1G69220.1 23.588 301 153 10 386 654 248 503 2.67e-13 73.9
Msa0563210 AT1G73460.2 32.934 167 101 6 495 654 998 1160 7.47e-13 72.8
Msa0563210 AT1G73460.1 32.934 167 101 6 495 654 998 1160 7.47e-13 72.8
Msa0563210 AT1G73450.1 32.934 167 101 6 495 654 981 1143 9.13e-13 72.4
Msa0563210 AT3G61960.1 25.392 319 149 12 378 656 1 270 9.55e-13 72.0
Msa0563210 AT3G61960.2 25.392 319 149 12 378 656 1 270 1.01e-12 72.0
Msa0563210 AT5G45810.1 31.481 216 110 9 393 577 34 242 1.18e-12 71.2
Msa0563210 AT3G17750.1 30.682 176 93 6 495 654 967 1129 1.65e-12 71.6
Msa0563210 AT3G07980.1 28.241 216 127 6 372 561 4 217 1.73e-12 71.6
Msa0563210 AT3G07980.2 28.241 216 127 6 372 561 4 217 1.94e-12 71.6
Msa0563210 AT3G06230.1 29.557 203 109 5 383 557 49 245 2.17e-12 68.9
Msa0563210 AT4G04720.2 25.987 304 153 11 384 655 76 339 2.34e-12 70.5
Msa0563210 AT4G04720.1 25.987 304 153 11 384 655 76 339 2.34e-12 70.5
Msa0563210 AT1G29230.1 27.679 336 160 15 352 656 47 330 2.72e-12 70.5
Msa0563210 AT4G18700.1 27.458 295 139 12 393 656 32 282 2.79e-12 70.1
Msa0563210 AT3G20860.1 25.000 220 135 5 384 577 1 216 2.83e-12 69.7
Msa0563210 AT3G45240.3 25.325 308 155 11 380 654 101 366 3.90e-12 69.3
Msa0563210 AT3G45240.2 24.837 306 162 9 380 654 101 369 4.45e-12 68.9
Msa0563210 AT3G45240.1 24.837 306 162 9 380 654 101 369 4.45e-12 68.9
Msa0563210 AT5G18700.1 26.101 318 161 10 384 676 1 269 4.55e-12 70.5
Msa0563210 AT4G04740.4 30.435 184 91 5 501 684 210 356 7.86e-12 68.9
Msa0563210 AT4G04740.6 30.435 184 91 5 501 684 210 356 7.86e-12 68.9
Msa0563210 AT4G04740.5 30.435 184 91 5 501 684 210 356 7.86e-12 68.9
Msa0563210 AT4G04740.3 30.435 184 91 5 501 684 210 356 7.86e-12 68.9
Msa0563210 AT4G04740.1 30.435 184 91 5 501 684 210 356 7.86e-12 68.9
Msa0563210 AT4G04740.7 30.435 184 91 5 501 684 210 356 7.86e-12 68.9
Msa0563210 AT4G04740.2 30.435 184 91 5 501 684 210 356 8.22e-12 68.9
Msa0563210 AT1G50240.3 27.727 220 127 6 384 577 3 216 1.75e-11 68.6
Msa0563210 AT1G50240.2 27.727 220 127 6 384 577 3 216 1.75e-11 68.6
Msa0563210 AT3G15220.1 24.378 201 121 5 387 561 15 210 2.63e-11 67.4
Msa0563210 AT1G69220.2 23.288 292 147 10 395 654 230 476 3.73e-11 67.0
Msa0563210 AT1G53165.1 25.373 201 119 6 387 561 15 210 4.69e-11 66.6
Msa0563210 AT1G53165.2 25.373 201 119 6 387 561 15 210 4.83e-11 66.6
Msa0563210 AT1G53165.3 25.373 201 119 6 387 561 15 210 4.97e-11 66.6
Msa0563210 AT5G57630.2 27.016 248 130 7 378 591 3 233 8.50e-11 65.1
Msa0563210 AT5G57630.1 27.016 248 130 7 378 591 3 233 9.78e-11 65.1

Find 289 sgRNAs with CRISPR-Local

Find 537 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGGCACCTGAACTTCTTC+TGG 0.122719 4_1:+63514163 Msa0563210:intron
TCTCCAGTTCTTTCTGATTC+TGG 0.124847 4_1:+63514766 Msa0563210:CDS
TTCACTTCACTTTGGCTAAA+TGG 0.176063 4_1:-63513482 None:intergenic
TCTTGTAAATTACTCAATTT+TGG 0.187271 4_1:-63517313 None:intergenic
TCCTATACTTTAGGATATTC+TGG 0.207969 4_1:-63516732 None:intergenic
TGTCTAATACTTTACCATTA+TGG 0.210360 4_1:+63517403 Msa0563210:three_prime_UTR
AACATAAGAACCGGGAATTT+TGG 0.226682 4_1:-63517338 None:intergenic
GAGACTAACTCCTGAGGTTT+TGG 0.229977 4_1:+63512857 Msa0563210:CDS
CCGCCTTGAAACTTCCAAAT+TGG 0.230918 4_1:-63512094 None:intergenic
TTACCACGAAAACGAGTTTA+AGG 0.247286 4_1:+63512062 Msa0563210:CDS
GCTTCCCGCTGACTTCTCTT+AGG 0.250993 4_1:+63513315 Msa0563210:CDS
TTCCCCGGTCTTCTTATCTT+TGG 0.256017 4_1:-63513249 None:intergenic
ATTTGAGTATTAAAGTAATA+TGG 0.272054 4_1:+63515662 Msa0563210:three_prime_UTR
TGAGGTTGAGCTGGAGGTTC+AGG 0.276655 4_1:-63513131 None:intergenic
GGGTGAGGCAGAAGGATGTT+AGG 0.280799 4_1:+63512193 Msa0563210:CDS
GGAGTTGCAGCAGGGTGAAT+TGG 0.287216 4_1:+63515238 Msa0563210:CDS
AACACTACCACTCATTTAAA+TGG 0.293995 4_1:-63518335 None:intergenic
CAGCCTAGTTGTCGCAAGTT+TGG 0.303093 4_1:+63517787 Msa0563210:three_prime_UTR
CCTGGCCATATTGTTTCATT+TGG 0.310614 4_1:-63514464 None:intergenic
TAATTGAACTCCTATACTTT+AGG 0.312818 4_1:-63516741 None:intergenic
TTTGGTTTGGCTCGTCAATA+TGG 0.316228 4_1:+63513627 Msa0563210:CDS
GAGATTCCAGAGATAGGATT+AGG 0.320055 4_1:+63512172 Msa0563210:CDS
TGGCATAACCTTCTGAAATT+AGG 0.320485 4_1:+63515551 Msa0563210:three_prime_UTR
GAACATACGGTGTTGTATAT+AGG 0.321680 4_1:+63513225 Msa0563210:CDS
CTCACCTGGTGGTTACTCTT+TGG 0.322663 4_1:+63513670 Msa0563210:CDS
AAGAACGGTCAACATGCTTC+AGG 0.324931 4_1:+63513154 Msa0563210:CDS
ACATGATCTTAAAGGATTAA+TGG 0.326337 4_1:+63513445 Msa0563210:CDS
AGCCCCAATGATTCTAAAAT+AGG 0.327458 4_1:+63512906 Msa0563210:CDS
TAAGGATCACGAGTCCAATT+TGG 0.332451 4_1:+63512080 Msa0563210:CDS
GCTAATTAACAATCTAAGTT+GGG 0.334200 4_1:+63518388 Msa0563210:three_prime_UTR
ATTAGCAAAATACACCTATA+AGG 0.335731 4_1:-63518371 None:intergenic
AGCGACAGAACAGACGATTT+TGG 0.352873 4_1:-63512546 None:intergenic
ATGATGAGGAAATGCCTAAA+AGG 0.353294 4_1:+63512829 Msa0563210:CDS
TGAGTTTCCCACAGCATCTA+AGG 0.355897 4_1:+63512629 Msa0563210:CDS
ATCAGAAAAGGATGACTATA+TGG 0.359590 4_1:+63513025 Msa0563210:CDS
TGCTAATTAACAATCTAAGT+TGG 0.360151 4_1:+63518387 Msa0563210:three_prime_UTR
TTCCGTCGCTGCTCCTCTAA+AGG 0.364469 4_1:-63515215 None:intergenic
GAGATGGGTGAACCAACATT+TGG 0.365928 4_1:-63518308 None:intergenic
AAAGTAGGTCTTATTGTGAT+TGG 0.367891 4_1:+63517473 Msa0563210:three_prime_UTR
TCTTCCAGCCGGAGTGATTC+CGG 0.368458 4_1:+63512255 Msa0563210:CDS
TACATGGAACATGATCTTAA+AGG 0.371667 4_1:+63513437 Msa0563210:CDS
TGAAGGGGTCATCGAAGGTT+AGG 0.372654 4_1:+63512478 Msa0563210:CDS
GCACTCCAAATGAAACAATA+TGG 0.372793 4_1:+63514459 Msa0563210:CDS
AAGTGCGTTCTGTCAGGAAC+AGG 0.374379 4_1:+63512592 Msa0563210:CDS
GAGTTGCAGCAGGGTGAATT+GGG 0.376181 4_1:+63515239 Msa0563210:CDS
GGTGCTATTGAATCTGAGTC+TGG 0.377045 4_1:+63512372 Msa0563210:CDS
TCCTTGACATCAACTATGTA+TGG 0.382483 4_1:-63513368 None:intergenic
CTGTTATCAATGGTAATTAT+CGG 0.386854 4_1:+63512229 Msa0563210:CDS
CGCTGCTCCTCTAAAGGGTC+TGG 0.387442 4_1:-63515209 None:intergenic
CTCTCACTGGAAAGCTCACC+AGG 0.387536 4_1:-63512339 None:intergenic
TGTCGCAAGTTTGGAATAGT+TGG 0.388903 4_1:+63517796 Msa0563210:three_prime_UTR
TTCTTCCGAATCAGATGATC+TGG 0.390201 4_1:-63512949 None:intergenic
AGGCATGAATTCTTTGCTCT+TGG 0.391274 4_1:-63514967 None:intergenic
AACATACGGTGTTGTATATA+GGG 0.397613 4_1:+63513226 Msa0563210:CDS
CAAGAGTCCAGACCCTTTAG+AGG 0.399262 4_1:+63515202 Msa0563210:CDS
AGGGCACCTGAACTTCTTCT+GGG 0.400439 4_1:+63514164 Msa0563210:intron
TTCGCCCATTGTGTGGGATC+AGG 0.402507 4_1:+63512443 Msa0563210:CDS
TCATTACCCCATGTCTGTTT+CGG 0.402889 4_1:-63512696 None:intergenic
AATCTGAAGATGACATTGAT+AGG 0.405819 4_1:+63513099 Msa0563210:CDS
TTATAATATGCTGTCAAGTC+TGG 0.408494 4_1:+63517446 Msa0563210:three_prime_UTR
GGAACATAATCCTCACCTTC+TGG 0.408603 4_1:-63512735 None:intergenic
AGTATGATCCGGTTAGGAAT+GGG 0.409347 4_1:+63512136 Msa0563210:CDS
GGTGAGGCAGAAGGATGTTA+GGG 0.410047 4_1:+63512194 Msa0563210:CDS
GTAACCACCAGGTGAGTATA+TGG 0.411054 4_1:-63513663 None:intergenic
TTACAAGACACCAAAATTCC+CGG 0.412696 4_1:+63517328 Msa0563210:three_prime_UTR
ACCGTTCTTTGAGGTTGAGC+TGG 0.419434 4_1:-63513140 None:intergenic
TCTAAGGAACCGTTGTTCAA+TGG 0.419835 4_1:+63514251 Msa0563210:CDS
TCCGTCGCTGCTCCTCTAAA+GGG 0.421185 4_1:-63515214 None:intergenic
CTCCTCTGCAGGAGAGGAAA+AGG 0.424203 4_1:+63512415 Msa0563210:CDS
GTGAACCAACATTTGGGTTA+AGG 0.428394 4_1:-63518301 None:intergenic
AATGGCTGAGCTATTGTCTA+AGG 0.431090 4_1:+63514235 Msa0563210:CDS
AGATTCCAGAGATAGGATTA+GGG 0.432389 4_1:+63512173 Msa0563210:CDS
TAGAATGTTCATTGAGACAT+AGG 0.438901 4_1:-63515301 None:intergenic
CTGTCAGGAACAGGGAAACT+AGG 0.440288 4_1:+63512601 Msa0563210:CDS
AGATGGGTGAACCAACATTT+GGG 0.442358 4_1:-63518307 None:intergenic
GGCATGAATTCTTTGCTCTT+GGG 0.442678 4_1:-63514966 None:intergenic
TCCGGTAGCAGTGGCAGCCT+TGG 0.443004 4_1:+63512273 Msa0563210:CDS
GGTAAAGTATTAGACACAAC+TGG 0.443047 4_1:-63517396 None:intergenic
CGGTGACAAGGACTGAGTTA+AGG 0.443150 4_1:-63512676 None:intergenic
CGAAAGAGTATGATCCGGTT+AGG 0.444319 4_1:+63512130 Msa0563210:CDS
ACATTTAACAATCTCCATAA+TGG 0.448591 4_1:-63517417 None:intergenic
GTCTCGGTCCCCTCCTCTGC+AGG 0.449727 4_1:+63512404 Msa0563210:CDS
GCGACGGAAGGAGTTGCAGC+AGG 0.452410 4_1:+63515229 Msa0563210:CDS
AATCCAGAATCAGAAAGAAC+TGG 0.456787 4_1:-63514769 None:intergenic
CTTCCCGCTGACTTCTCTTA+GGG 0.457650 4_1:+63513316 Msa0563210:CDS
GAAAGTCAGAACATAAGAAC+CGG 0.457798 4_1:-63517347 None:intergenic
AGTCCAATTTGGAAGTTTCA+AGG 0.458707 4_1:+63512091 Msa0563210:CDS
AGAATCTCACCCTCATCAAC+AGG 0.462601 4_1:-63512804 None:intergenic
CCTCACCCTAATCCTATCTC+TGG 0.463374 4_1:-63512178 None:intergenic
ATAAATAGATTTATGGCTGC+TGG 0.464357 4_1:+63512027 None:intergenic
GGGGCAGAGATTCCAGAGAT+AGG 0.464958 4_1:+63512166 Msa0563210:CDS
TTTCATGGTTATGGAATACA+TGG 0.467061 4_1:+63513421 Msa0563210:CDS
ACAGCAAAGCTATATATTAC+CGG 0.469430 4_1:-63517205 None:intergenic
TCTTATGTTCTGACTTTCGA+TGG 0.471205 4_1:+63517352 Msa0563210:three_prime_UTR
AAGTTCAAGTGCGTTCTGTC+AGG 0.472521 4_1:+63512586 Msa0563210:CDS
GTGGTCTCTTGGTTGTATAA+TGG 0.472632 4_1:+63514217 Msa0563210:CDS
AATTCTTTGCTCTTGGGAAG+AGG 0.479673 4_1:-63514960 None:intergenic
TTGGTTTGGCTCGTCAATAT+GGG 0.480877 4_1:+63513628 Msa0563210:CDS
GCTATTGATATGTGGTCTCT+TGG 0.481064 4_1:+63514206 Msa0563210:CDS
ACCAAGGCTGCCACTGCTAC+CGG 0.481499 4_1:-63512274 None:intergenic
GAAATATATCTTCTTCAAGA+TGG 0.482592 4_1:+63512763 Msa0563210:CDS
TAGGATTAGGGTGAGGCAGA+AGG 0.482821 4_1:+63512185 Msa0563210:CDS
GGGCCTTCTGTGCATTTCGT+TGG 0.485009 4_1:+63515767 Msa0563210:three_prime_UTR
ACAGACATGGGGTAATGATC+AGG 0.485568 4_1:+63512701 Msa0563210:CDS
GTCGCAAGTTTGGAATAGTT+GGG 0.488628 4_1:+63517797 Msa0563210:three_prime_UTR
AGGTTAACATTCTTCGTGCT+TGG 0.489719 4_1:+63515484 Msa0563210:three_prime_UTR
GTGCTATTGAATCTGAGTCT+GGG 0.495405 4_1:+63512373 Msa0563210:CDS
AAGTTTGGAATAGTTGGGTC+GGG 0.495616 4_1:+63517802 Msa0563210:three_prime_UTR
AAAGAAGTTGCTGTTATCAA+TGG 0.496294 4_1:+63512219 Msa0563210:CDS
GTAGCAAGCGTGCAAAAGTC+AGG 0.497176 4_1:-63517284 None:intergenic
GTATCAAAGCAAGCAGGTTG+AGG 0.497241 4_1:+63516703 Msa0563210:intron
TTCTGTATCTGAGTGACTAC+TGG 0.498468 4_1:-63513078 None:intergenic
CCAGGCTTCTCAAAATTACC+TGG 0.498528 4_1:+63514482 Msa0563210:CDS
TCCTGGTATTGAATCAGAAA+AGG 0.498860 4_1:+63513013 Msa0563210:CDS
CAATTTGGAAGTTTCAAGGC+GGG 0.499417 4_1:+63512095 Msa0563210:CDS
TATTCACACAGCTGCGAGAT+GGG 0.499636 4_1:+63517861 Msa0563210:three_prime_UTR
TGGTGGTTACTCTTTGGTAC+AGG 0.500836 4_1:+63513676 Msa0563210:CDS
CGGTTGGTGTGAAGTGGAAG+AGG 0.502100 4_1:+63515746 Msa0563210:three_prime_UTR
CTGTCCTGAGCATGTTGAGC+AGG 0.505934 4_1:-63514996 None:intergenic
CCTAACTTATGACCCTGAAA+AGG 0.508625 4_1:+63514810 Msa0563210:CDS
TCATCCTGATCCCACACAAT+GGG 0.508964 4_1:-63512447 None:intergenic
TAAGCACTTTCACTTCACTT+TGG 0.509072 4_1:-63513490 None:intergenic
GAAGAAGATATATTTCGAGT+TGG 0.509356 4_1:-63512756 None:intergenic
AATCATTAGGGTGGAATGTG+TGG 0.509657 4_1:+63518252 Msa0563210:intron
GAGTATGATCCGGTTAGGAA+TGG 0.510420 4_1:+63512135 Msa0563210:CDS
GTGGCAGCCTTGGTCCTCGC+CGG 0.511363 4_1:+63512283 Msa0563210:CDS
CAGCAGGGTGAATTGGGGAC+TGG 0.511499 4_1:+63515245 Msa0563210:CDS
TTTCCTCTCCTGCAGAGGAG+GGG 0.512037 4_1:-63512412 None:intergenic
TCGAGCCAGATCATCTGATT+CGG 0.512465 4_1:+63512944 Msa0563210:CDS
AACAGTAACCTTAGATGCTG+TGG 0.512876 4_1:-63512637 None:intergenic
TGCGTAGGGTAAAACCTTAT+AGG 0.513257 4_1:+63518357 Msa0563210:three_prime_UTR
CTATTGTATGCAGCGGATCA+CGG 0.514408 4_1:+63514899 Msa0563210:intron
GGTGAGCTTTCCAGTGAGAG+TGG 0.514806 4_1:+63512342 Msa0563210:CDS
ACTTCACACCTTCTAAAAGC+TGG 0.514934 4_1:-63513518 None:intergenic
ACCATCAGACCCACTCTCAC+TGG 0.517159 4_1:-63512352 None:intergenic
GCATGTTGAGCAGGAAATGT+AGG 0.519216 4_1:-63514987 None:intergenic
AGCATGTTGACCGTTCTTTG+AGG 0.520209 4_1:-63513149 None:intergenic
CAAGTTTGGAATAGTTGGGT+CGG 0.520219 4_1:+63517801 Msa0563210:three_prime_UTR
AAGAGCAGCCACCGGTGTTG+TGG 0.520631 4_1:-63512505 None:intergenic
AATGAGTGGTAGTGTTGCGT+AGG 0.520706 4_1:+63518342 Msa0563210:three_prime_UTR
CTCTTTGCCATTTAAATGAG+TGG 0.521284 4_1:+63518328 Msa0563210:three_prime_UTR
GAAGGGGTCATCGAAGGTTA+GGG 0.524258 4_1:+63512479 Msa0563210:CDS
TCTAGTGGCGATGGACATCC+TGG 0.524669 4_1:+63512996 Msa0563210:CDS
TAAATGCTACAAATGTTACA+TGG 0.525334 4_1:+63517258 Msa0563210:three_prime_UTR
CTAATTAACAATCTAAGTTG+GGG 0.527630 4_1:+63518389 Msa0563210:three_prime_UTR
CTTTAATGCTACAACTTCCC+CGG 0.528008 4_1:-63513264 None:intergenic
TCTTCTTCAAGATGGGCAGC+TGG 0.528302 4_1:+63512771 Msa0563210:CDS
GTGGGTATCACCTACACAAT+CGG 0.529087 4_1:+63518271 Msa0563210:three_prime_UTR
ACCAGAATATCCTAAAGTAT+AGG 0.531007 4_1:+63516731 Msa0563210:three_prime_UTR
CTTATGTTCTGACTTTCGAT+GGG 0.531311 4_1:+63517353 Msa0563210:three_prime_UTR
TCCAGTGAGAGTGGGTCTGA+TGG 0.531386 4_1:+63512351 Msa0563210:CDS
GGGCACCTGAACTTCTTCTG+GGG 0.532191 4_1:+63514165 Msa0563210:intron
TTTCCTGCCACATCATTCAC+TGG 0.532432 4_1:+63514742 Msa0563210:CDS
CTGCTCAACATGCTCAGGAC+AGG 0.534151 4_1:+63514997 Msa0563210:CDS
CCGTGACACTTTGCTGCTCA+AGG 0.535276 4_1:+63515526 Msa0563210:three_prime_UTR
TCATTTAAATGGCAAAGAGA+TGG 0.536503 4_1:-63518324 None:intergenic
AAGTCAACCGATAGAGAGCC+TGG 0.537292 4_1:+63512321 Msa0563210:CDS
TTTGGCAGCTGAGGCAGAGG+AGG 0.537588 4_1:-63512528 None:intergenic
CAGGGTGAATTGGGGACTGG+TGG 0.537620 4_1:+63515248 Msa0563210:CDS
ACAAAATTGACCTTGACTCC+AGG 0.538497 4_1:-63514500 None:intergenic
AGACTTAACAAGATAGATGA+AGG 0.541321 4_1:+63513203 Msa0563210:CDS
GAAATTGTTCACAGTGAACA+TGG 0.541996 4_1:-63517235 None:intergenic
ATTTCCTGCTCAACATGCTC+AGG 0.542065 4_1:+63514992 Msa0563210:CDS
TGGAAATTATTATGCATGAA+AGG 0.543264 4_1:+63515801 Msa0563210:three_prime_UTR
AAGCCGCTCTGAATCATGAA+TGG 0.543290 4_1:+63514925 Msa0563210:CDS
AAATATATCTTCTTCAAGAT+GGG 0.544572 4_1:+63512764 Msa0563210:CDS
ATTCCAAACTTGCGACAACT+AGG 0.546031 4_1:-63517790 None:intergenic
CATTTAAATGGCAAAGAGAT+GGG 0.547606 4_1:-63518323 None:intergenic
GTGAGCTTTCCAGTGAGAGT+GGG 0.547648 4_1:+63512343 Msa0563210:CDS
ACCCTTTAGAGGAGCAGCGA+CGG 0.548664 4_1:+63515213 Msa0563210:CDS
ACTCTAGTCTCCAAAACCTC+AGG 0.549774 4_1:-63512867 None:intergenic
GCTACCGGAATCACTCCGGC+TGG 0.551956 4_1:-63512259 None:intergenic
ATGTAAAGCATCCACACTGA+TGG 0.552348 4_1:+63517895 Msa0563210:three_prime_UTR
AGCTGAGCAGCCAGAAGGTG+AGG 0.552814 4_1:+63512725 Msa0563210:CDS
CCCAATGATTCTAAAATAGG+TGG 0.552856 4_1:+63512909 Msa0563210:CDS
TCTTGGGAAGAGGAACTTCA+CGG 0.554885 4_1:-63514950 None:intergenic
CCTTGTCACCGAAACAGACA+TGG 0.557092 4_1:+63512688 Msa0563210:CDS
CCAAATGAAACAATATGGCC+AGG 0.557752 4_1:+63514464 Msa0563210:CDS
AGTCTGGGGTGAACAAGTCT+CGG 0.558026 4_1:+63512388 Msa0563210:CDS
TGTCAGGAACAGGGAAACTA+GGG 0.558367 4_1:+63512602 Msa0563210:CDS
ATGATGTTAACAGGCGGATG+CGG 0.558530 4_1:+63515171 Msa0563210:intron
ATCATTAGGGTGGAATGTGT+GGG 0.558899 4_1:+63518253 Msa0563210:intron
AGGGCCAAAGATAAGAAGAC+CGG 0.559159 4_1:+63513245 Msa0563210:CDS
TATGATCCGGTTAGGAATGG+GGG 0.559192 4_1:+63512138 Msa0563210:CDS
GGGAGAACGTCTAGTGGCGA+TGG 0.560177 4_1:+63512987 Msa0563210:CDS
CTCAAAATTACCTGGAGTCA+AGG 0.560386 4_1:+63514490 Msa0563210:CDS
GCACTCCTTAACCCAAATGT+TGG 0.561055 4_1:+63518296 Msa0563210:three_prime_UTR
AGGAAATGCCTAAAAGGAAG+AGG 0.561761 4_1:+63512835 Msa0563210:CDS
TTATTCACACAGCTGCGAGA+TGG 0.562564 4_1:+63517860 Msa0563210:three_prime_UTR
AGAGGAGGAAGAGCAGCCAC+CGG 0.562626 4_1:-63512513 None:intergenic
GTTCTTTGAGGTTGAGCTGG+AGG 0.563263 4_1:-63513137 None:intergenic
AACCACACCGGCGAGGACCA+AGG 0.564324 4_1:-63512290 None:intergenic
GTTAAGGAAGGGGAAGGAGA+AGG 0.565125 4_1:-63512660 None:intergenic
AAATTCGAAAGAGTATGATC+CGG 0.565209 4_1:+63512125 Msa0563210:CDS
GATGTCAAGGAAGTAGTGGT+TGG 0.565981 4_1:+63513380 Msa0563210:CDS
CGCCACTAGACGTTCTCCCA+TGG 0.567512 4_1:-63512983 None:intergenic
GGAAGTTGTAGCATTAAAGA+AGG 0.567586 4_1:+63513268 Msa0563210:CDS
GGTCCCCTCCTCTGCAGGAG+AGG 0.568645 4_1:+63512409 Msa0563210:CDS
AGCATTAAAGAAGGTCAAGA+TGG 0.569113 4_1:+63513277 Msa0563210:CDS
AACTATGTATGGGTGGTGAA+AGG 0.569239 4_1:-63513357 None:intergenic
CCCATACATAGTTGATGTCA+AGG 0.569317 4_1:+63513367 Msa0563210:CDS
CCATGTCTGTTTCGGTGACA+AGG 0.570794 4_1:-63512688 None:intergenic
ACTGACTTCCTAATTTCAGA+AGG 0.571475 4_1:-63515559 None:intergenic
TTTATGGCTGCTGGTAGACA+TGG 0.572371 4_1:+63512036 None:intergenic
TCAGGATGACAAGGAAGTGA+AGG 0.573143 4_1:+63512461 Msa0563210:CDS
GACAAGGACTGAGTTAAGGA+AGG 0.575267 4_1:-63512672 None:intergenic
AGGTGAGTATATGGTTTCAA+AGG 0.575895 4_1:-63513654 None:intergenic
AGAACGGTCAACATGCTTCA+GGG 0.577075 4_1:+63513155 Msa0563210:CDS
CCTTGACATCAACTATGTAT+GGG 0.580868 4_1:-63513367 None:intergenic
TTTAGAGGAGCAGCGACGGA+AGG 0.581722 4_1:+63515217 Msa0563210:CDS
TCAAAGCAAGCAGGTTGAGG+AGG 0.581731 4_1:+63516706 Msa0563210:three_prime_UTR
AAGCTCACCAGGCTCTCTAT+CGG 0.583676 4_1:-63512328 None:intergenic
TTTCCCTAAGAGAAGTCAGC+GGG 0.585005 4_1:-63513319 None:intergenic
CAGGAAGCTGAGCAGCCAGA+AGG 0.586301 4_1:+63512720 Msa0563210:CDS
CGGAGTGATTCCGGTAGCAG+TGG 0.587437 4_1:+63512264 Msa0563210:CDS
GTATGATCCGGTTAGGAATG+GGG 0.587540 4_1:+63512137 Msa0563210:CDS
ACTCAACAGCTATTGATATG+TGG 0.588009 4_1:+63514198 Msa0563210:CDS
GTCAAGTCTGGTCATAAAGT+AGG 0.589636 4_1:+63517458 Msa0563210:three_prime_UTR
GACTGAGTTAAGGAAGGGGA+AGG 0.590116 4_1:-63512666 None:intergenic
GTCATCCTGATCCCACACAA+TGG 0.590184 4_1:-63512448 None:intergenic
GGGCCAAAGATAAGAAGACC+GGG 0.592366 4_1:+63513246 Msa0563210:CDS
AAGATAGATGAAGGAACATA+CGG 0.592442 4_1:+63513212 Msa0563210:CDS
CAGGATGACAAGGAAGTGAA+GGG 0.592456 4_1:+63512462 Msa0563210:CDS
TAACCATGAAAATACTGTCA+AGG 0.592600 4_1:-63513409 None:intergenic
CATATTGTGTATGCAAGAGA+CGG 0.592940 4_1:+63515726 Msa0563210:three_prime_UTR
AGTTGATGTCAAGGAAGTAG+TGG 0.596814 4_1:+63513376 Msa0563210:CDS
ACAGTAACCTTAGATGCTGT+GGG 0.598420 4_1:-63512636 None:intergenic
TCCAGCTCAACCTCAAAGAA+CGG 0.599078 4_1:+63513139 Msa0563210:CDS
ACACTTTGCTGCTCAAGGTG+TGG 0.602174 4_1:+63515531 Msa0563210:three_prime_UTR
AGGTGAGGATATGTACTGAA+CGG 0.602632 4_1:+63515353 Msa0563210:three_prime_UTR
AGCCTTGGTCCTCGCCGGTG+TGG 0.605000 4_1:+63512288 Msa0563210:CDS
ACAAGGACTGAGTTAAGGAA+GGG 0.605089 4_1:-63512671 None:intergenic
ATGAGTGGTAGTGTTGCGTA+GGG 0.606959 4_1:+63518343 Msa0563210:three_prime_UTR
AGATAACTCTCCTGTTGATG+AGG 0.609012 4_1:+63512794 Msa0563210:CDS
ATTATCGGTCATCTTCCAGC+CGG 0.610184 4_1:+63512244 Msa0563210:CDS
TCTCCAACGAAATGCACAGA+AGG 0.610530 4_1:-63515770 None:intergenic
GGAAGTGAAGGGGTCATCGA+AGG 0.612211 4_1:+63512473 Msa0563210:CDS
AAGAAAGAAGTGTTAACCAT+GGG 0.612803 4_1:+63512967 Msa0563210:CDS
CACTGCTACCGGAATCACTC+CGG 0.615938 4_1:-63512263 None:intergenic
AAAGAAGGTCAAGATGGAGA+AGG 0.618545 4_1:+63513283 Msa0563210:CDS
AACCATGGGAGAACGTCTAG+TGG 0.620965 4_1:+63512981 Msa0563210:CDS
AATTTGGAAGTTTCAAGGCG+GGG 0.624061 4_1:+63512096 Msa0563210:CDS
GATCCAGTGAATGATGTGGC+AGG 0.627509 4_1:-63514745 None:intergenic
CCAGAGATAGGATTAGGGTG+AGG 0.627823 4_1:+63512178 Msa0563210:CDS
GATAACTCTCCTGTTGATGA+GGG 0.631307 4_1:+63512795 Msa0563210:CDS
TTTCGTTGGAGAAAATGACA+TGG 0.631631 4_1:+63515781 Msa0563210:three_prime_UTR
TATTAGACACAACTGGAAGG+TGG 0.632428 4_1:-63517389 None:intergenic
GGCACCTGAACTTCTTCTGG+GGG 0.633122 4_1:+63514166 Msa0563210:CDS
AGGAGTGCCTCCGATTGTGT+AGG 0.633448 4_1:-63518281 None:intergenic
ACTGCAGTATCAAAGCAAGC+AGG 0.633608 4_1:+63516697 Msa0563210:intron
GGGTGAGATTCTCAATGATG+AGG 0.634911 4_1:+63512815 Msa0563210:CDS
GAAGAAAGAAGTGTTAACCA+TGG 0.634994 4_1:+63512966 Msa0563210:CDS
CTTGTCACCGAAACAGACAT+GGG 0.637212 4_1:+63512689 Msa0563210:CDS
TGCTATTGAATCTGAGTCTG+GGG 0.637897 4_1:+63512374 Msa0563210:CDS
TATATGGACATTGATGTTCG+AGG 0.639759 4_1:+63513041 Msa0563210:CDS
CGACGGAAGGAGTTGCAGCA+GGG 0.640830 4_1:+63515230 Msa0563210:CDS
TGTACCAAAGAGTAACCACC+AGG 0.641674 4_1:-63513674 None:intergenic
TTTGAAACCATATACTCACC+TGG 0.644910 4_1:+63513656 Msa0563210:CDS
GGTTGGTGTGAAGTGGAAGA+GGG 0.650105 4_1:+63515747 Msa0563210:three_prime_UTR
AGTGCGTTCTGTCAGGAACA+GGG 0.650517 4_1:+63512593 Msa0563210:CDS
CAAGGACTGAGTTAAGGAAG+GGG 0.650797 4_1:-63512670 None:intergenic
AGTTGCAGCAGGGTGAATTG+GGG 0.650975 4_1:+63515240 Msa0563210:CDS
TTGTCCTTCAGACTCTCTAG+AGG 0.652122 4_1:+63516765 Msa0563210:three_prime_UTR
TGTGTGGGATCAGGATGACA+AGG 0.655856 4_1:+63512452 Msa0563210:CDS
CCTTGAGCAGCAAAGTGTCA+CGG 0.656298 4_1:-63515526 None:intergenic
ATGTTTGCATTGATGAGGTG+AGG 0.656911 4_1:+63515338 Msa0563210:three_prime_UTR
AAGTATTAGACACAACTGGA+AGG 0.657610 4_1:-63517392 None:intergenic
CCAATTTGGAAGTTTCAAGG+CGG 0.658089 4_1:+63512094 Msa0563210:CDS
AAAGTCAGAACATAAGAACC+GGG 0.658705 4_1:-63517346 None:intergenic
ACAGAATGTTTGCATTGATG+AGG 0.662027 4_1:+63515333 Msa0563210:three_prime_UTR
AAGAGACGGTTGGTGTGAAG+TGG 0.663394 4_1:+63515740 Msa0563210:three_prime_UTR
GGAATTCGATCAACTTGACA+AGG 0.666870 4_1:+63514280 Msa0563210:CDS
GGTTAGGGTCTCCACAACAC+CGG 0.669234 4_1:+63512494 Msa0563210:CDS
TAGGGTCTCCACAACACCGG+TGG 0.682799 4_1:+63512497 Msa0563210:CDS
GAAACCATATACTCACCTGG+TGG 0.687703 4_1:+63513659 Msa0563210:CDS
ATTTCCCTAAGAGAAGTCAG+CGG 0.691703 4_1:-63513320 None:intergenic
ATCAATGCAAACATTCTGTG+TGG 0.694046 4_1:-63515329 None:intergenic
AGGATGACAAGGAAGTGAAG+GGG 0.695181 4_1:+63512463 Msa0563210:CDS
ATGATCCGGTTAGGAATGGG+GGG 0.695928 4_1:+63512139 Msa0563210:CDS
GAAGAGGAGACTAACTCCTG+AGG 0.695997 4_1:+63512851 Msa0563210:CDS
TTGTGTATGCAAGAGACGGT+TGG 0.699329 4_1:+63515730 Msa0563210:three_prime_UTR
TGTACCTCTAGAGAGTCTGA+AGG 0.702457 4_1:-63516769 None:intergenic
GGTATCACCTACACAATCGG+AGG 0.715296 4_1:+63518274 Msa0563210:three_prime_UTR
TGACATCAACTATGTATGGG+TGG 0.715859 4_1:-63513364 None:intergenic
TGGAGATCCAGTGAATGATG+TGG 0.720894 4_1:-63514749 None:intergenic
TACTGTATAGTCCATCAGTG+TGG 0.723197 4_1:-63517906 None:intergenic
GAACCATTCATGATTCAGAG+CGG 0.732971 4_1:-63514928 None:intergenic
TTGTCACCGAAACAGACATG+GGG 0.746867 4_1:+63512690 Msa0563210:CDS
GGCCAAAGATAAGAAGACCG+GGG 0.752769 4_1:+63513247 Msa0563210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATCTATTACATATAT+TGG + chr4_1:63513742-63513761 Msa0563210:intron 10.0%
!! CAATATGAATATTAAAAAAA+AGG - chr4_1:63515713-63515732 None:intergenic 10.0%
!!! AACAATTATCAATTTTATTA+TGG - chr4_1:63518423-63518442 None:intergenic 10.0%
!!! TATTGTAAACAAATTTTATC+TGG + chr4_1:63515639-63515658 Msa0563210:three_prime_UTR 15.0%
!! ATTTGAGTATTAAAGTAATA+TGG + chr4_1:63515662-63515681 Msa0563210:three_prime_UTR 15.0%
!!! TGGTCTTTTTTTTTTTTTTT+TGG + chr4_1:63515955-63515974 Msa0563210:intron 15.0%
!!! TCTTTTTTTTTTTTTTTTGG+AGG + chr4_1:63515958-63515977 Msa0563210:intron 15.0%
!!! CTTTTTTTTTTTTTTTTGGA+GGG + chr4_1:63515959-63515978 Msa0563210:intron 15.0%
!!! TTTTTTTTTTTTTTTTGGAG+GGG + chr4_1:63515960-63515979 Msa0563210:intron 15.0%
!!! AATAATTTGTTATTACTCTT+AGG - chr4_1:63516559-63516578 None:intergenic 15.0%
!! AAATATATCTTCTTCAAGAT+GGG + chr4_1:63512764-63512783 Msa0563210:CDS 20.0%
!!! AAAAATTTGTGATTTTGGTT+TGG + chr4_1:63513614-63513633 Msa0563210:CDS 20.0%
!! TTAATTAAATTAGCAACACA+GGG - chr4_1:63514047-63514066 None:intergenic 20.0%
!! ATTAATTAAATTAGCAACAC+AGG - chr4_1:63514048-63514067 None:intergenic 20.0%
!!! TTTTTTTTTTTTTTTGGAGG+GGG + chr4_1:63515961-63515980 Msa0563210:intron 20.0%
!! AAAATCATTGAAATTCTTCT+AGG - chr4_1:63516130-63516149 None:intergenic 20.0%
!! CAAACATTACAAATTATTTG+GGG - chr4_1:63516270-63516289 None:intergenic 20.0%
!! GCAAACATTACAAATTATTT+GGG - chr4_1:63516271-63516290 None:intergenic 20.0%
!!! ATTTTTTCTGACTATTTTCT+TGG + chr4_1:63516408-63516427 Msa0563210:intron 20.0%
!! TTATTTATTGCCTAGTTAAA+AGG + chr4_1:63516574-63516593 Msa0563210:intron 20.0%
!! TAGTCAATATGAATTTGATT+TGG - chr4_1:63517119-63517138 None:intergenic 20.0%
!!! AAATCAAATTCATATTGACT+AGG + chr4_1:63517118-63517137 Msa0563210:intron 20.0%
!!! TCTTGTAAATTACTCAATTT+TGG - chr4_1:63517316-63517335 None:intergenic 20.0%
!! AATATAAAATTCCCATCATT+GGG - chr4_1:63517624-63517643 None:intergenic 20.0%
!! CTATTTGAAAACGATTTAAA+TGG + chr4_1:63518114-63518133 Msa0563210:intron 20.0%
!! AAAACGATTTAAATGGAATT+TGG + chr4_1:63518121-63518140 Msa0563210:intron 20.0%
!!! ATGGTTGATTTTAATCATTA+GGG + chr4_1:63518240-63518259 Msa0563210:intron 20.0%
! CTGTTATCAATGGTAATTAT+CGG + chr4_1:63512229-63512248 Msa0563210:CDS 25.0%
! GAAATATATCTTCTTCAAGA+TGG + chr4_1:63512763-63512782 Msa0563210:CDS 25.0%
! ACATGATCTTAAAGGATTAA+TGG + chr4_1:63513445-63513464 Msa0563210:CDS 25.0%
!!! AAACCTGCTTTTAAATAACA+GGG + chr4_1:63513584-63513603 Msa0563210:intron 25.0%
!! GAGCTAAAAATTTGTGATTT+TGG + chr4_1:63513609-63513628 Msa0563210:CDS 25.0%
!!! TAAGTTTTATTCAATGCAAC+AGG - chr4_1:63513844-63513863 None:intergenic 25.0%
! CAGTTTGCAAGATTAATATT+TGG - chr4_1:63513909-63513928 None:intergenic 25.0%
! CAAATATTAATCTTGCAAAC+TGG + chr4_1:63513907-63513926 Msa0563210:intron 25.0%
! AAATAATTGACAAACACAGT+TGG - chr4_1:63514312-63514331 None:intergenic 25.0%
! AACTGTGTTTGTCAATTATT+TGG + chr4_1:63514311-63514330 Msa0563210:intron 25.0%
!!! TATTTTGTTTGCAGATTTTC+AGG + chr4_1:63514429-63514448 Msa0563210:intron 25.0%
! ACACTTACAAAAATTTACAG+CGG - chr4_1:63515117-63515136 None:intergenic 25.0%
! TTGTTAAACAATGTTGAGTA+AGG - chr4_1:63515146-63515165 None:intergenic 25.0%
! AATGTTAACCTGAAAAAATC+TGG - chr4_1:63515475-63515494 None:intergenic 25.0%
! TGGAAATTATTATGCATGAA+AGG + chr4_1:63515801-63515820 Msa0563210:three_prime_UTR 25.0%
! CTTAATATCCAAGATATCAT+AGG - chr4_1:63515836-63515855 None:intergenic 25.0%
! CTATGATATCTTGGATATTA+AGG + chr4_1:63515834-63515853 Msa0563210:intron 25.0%
! GACATTAGATATATATTGAC+TGG + chr4_1:63515935-63515954 Msa0563210:intron 25.0%
!!! TTTTTTTTTTTTTTGGAGGG+GGG + chr4_1:63515962-63515981 Msa0563210:intron 25.0%
! CGCAAACATTACAAATTATT+TGG - chr4_1:63516272-63516291 None:intergenic 25.0%
! GATCAGCATTAAGAAAAAAT+TGG - chr4_1:63516361-63516380 None:intergenic 25.0%
! TAATTGAACTCCTATACTTT+AGG - chr4_1:63516744-63516763 None:intergenic 25.0%
! AATAGAAAAGCAAACAATTC+TGG - chr4_1:63516857-63516876 None:intergenic 25.0%
! ATGCTGTATAAATTCATATG+TGG + chr4_1:63516886-63516905 Msa0563210:intron 25.0%
!!! CAATATGAATTTGATTTGGA+GGG - chr4_1:63517115-63517134 None:intergenic 25.0%
!!! TCAATATGAATTTGATTTGG+AGG - chr4_1:63517116-63517135 None:intergenic 25.0%
!!! TCTGACCAGTTTTTTATATT+AGG + chr4_1:63517181-63517200 Msa0563210:intron 25.0%
! TAAATGCTACAAATGTTACA+TGG + chr4_1:63517258-63517277 Msa0563210:three_prime_UTR 25.0%
! TGTCTAATACTTTACCATTA+TGG + chr4_1:63517403-63517422 Msa0563210:three_prime_UTR 25.0%
! ACATTTAACAATCTCCATAA+TGG - chr4_1:63517420-63517439 None:intergenic 25.0%
! GAATATAAAATTCCCATCAT+TGG - chr4_1:63517625-63517644 None:intergenic 25.0%
!! GGAATTTTATATTCAACTAC+TGG + chr4_1:63517631-63517650 Msa0563210:intron 25.0%
!!! ACACCAAACAATTTACTTTT+GGG - chr4_1:63517745-63517764 None:intergenic 25.0%
!! AACACCAAACAATTTACTTT+TGG - chr4_1:63517746-63517765 None:intergenic 25.0%
!! AACATGAAATTTTGCAGTTT+GGG + chr4_1:63517985-63518004 Msa0563210:intron 25.0%
! TTTACTTACTACAATAGCAA+TGG + chr4_1:63518068-63518087 Msa0563210:intron 25.0%
! TTACTTACTACAATAGCAAT+GGG + chr4_1:63518069-63518088 Msa0563210:intron 25.0%
!!! CATGGTTGATTTTAATCATT+AGG + chr4_1:63518239-63518258 Msa0563210:intron 25.0%
! ATTAGCAAAATACACCTATA+AGG - chr4_1:63518374-63518393 None:intergenic 25.0%
! TGCTAATTAACAATCTAAGT+TGG + chr4_1:63518387-63518406 Msa0563210:three_prime_UTR 25.0%
! GCTAATTAACAATCTAAGTT+GGG + chr4_1:63518388-63518407 Msa0563210:three_prime_UTR 25.0%
! CTAATTAACAATCTAAGTTG+GGG + chr4_1:63518389-63518408 Msa0563210:three_prime_UTR 25.0%
! AAATTCGAAAGAGTATGATC+CGG + chr4_1:63512125-63512144 Msa0563210:CDS 30.0%
! AAAGAAGTTGCTGTTATCAA+TGG + chr4_1:63512219-63512238 Msa0563210:CDS 30.0%
! GAAGAAGATATATTTCGAGT+TGG - chr4_1:63512759-63512778 None:intergenic 30.0%
!!! CACCTATTTTAGAATCATTG+GGG - chr4_1:63512911-63512930 None:intergenic 30.0%
!!! CCACCTATTTTAGAATCATT+GGG - chr4_1:63512912-63512931 None:intergenic 30.0%
!!! ACCACCTATTTTAGAATCAT+TGG - chr4_1:63512913-63512932 None:intergenic 30.0%
!!! TCTAAAATAGGTGGTTTTGA+AGG + chr4_1:63512918-63512937 Msa0563210:CDS 30.0%
!! AAGAAAGAAGTGTTAACCAT+GGG + chr4_1:63512967-63512986 Msa0563210:CDS 30.0%
ATCAGAAAAGGATGACTATA+TGG + chr4_1:63513025-63513044 Msa0563210:CDS 30.0%
AATCTGAAGATGACATTGAT+AGG + chr4_1:63513099-63513118 Msa0563210:CDS 30.0%
AGACTTAACAAGATAGATGA+AGG + chr4_1:63513203-63513222 Msa0563210:CDS 30.0%
AAGATAGATGAAGGAACATA+CGG + chr4_1:63513212-63513231 Msa0563210:CDS 30.0%
!! AACATACGGTGTTGTATATA+GGG + chr4_1:63513226-63513245 Msa0563210:CDS 30.0%
TAACCATGAAAATACTGTCA+AGG - chr4_1:63513412-63513431 None:intergenic 30.0%
! TGACAGTATTTTCATGGTTA+TGG + chr4_1:63513412-63513431 Msa0563210:CDS 30.0%
TTTCATGGTTATGGAATACA+TGG + chr4_1:63513421-63513440 Msa0563210:CDS 30.0%
TACATGGAACATGATCTTAA+AGG + chr4_1:63513437-63513456 Msa0563210:CDS 30.0%
! TTAATGATCCAGCTTTTAGA+AGG + chr4_1:63513510-63513529 Msa0563210:CDS 30.0%
!! CAAACCTGCTTTTAAATAAC+AGG + chr4_1:63513583-63513602 Msa0563210:intron 30.0%
!! AACCTGCTTTTAAATAACAG+GGG + chr4_1:63513585-63513604 Msa0563210:intron 30.0%
AAACATTGACCTAAAGGAAA+GGG - chr4_1:63513946-63513965 None:intergenic 30.0%
TAAACATTGACCTAAAGGAA+AGG - chr4_1:63513947-63513966 None:intergenic 30.0%
GTATGTAAACATTGACCTAA+AGG - chr4_1:63513952-63513971 None:intergenic 30.0%
ATAAGAGATCATTTACCTGA+TGG + chr4_1:63514124-63514143 Msa0563210:intron 30.0%
ACAGTCAATGTCTTCAATAA+AGG - chr4_1:63514552-63514571 None:intergenic 30.0%
TATACCTGAAAGGAACATTT+CGG - chr4_1:63514705-63514724 None:intergenic 30.0%
! AAGTGAACTTTACCTTTTCA+GGG - chr4_1:63514825-63514844 None:intergenic 30.0%
CTTAATACTAGAGAGAATTG+TGG - chr4_1:63514868-63514887 None:intergenic 30.0%
TTGATCTACTGGAAAACTAT+TGG + chr4_1:63515023-63515042 Msa0563210:intron 30.0%
ACAAGATTCATGATGTTAAC+AGG + chr4_1:63515162-63515181 Msa0563210:intron 30.0%
TAGAATGTTCATTGAGACAT+AGG - chr4_1:63515304-63515323 None:intergenic 30.0%
! AGATGTTTTCTTTTACGTTC+TGG + chr4_1:63515447-63515466 Msa0563210:three_prime_UTR 30.0%
AATGCATTCCTATGATATCT+TGG + chr4_1:63515825-63515844 Msa0563210:intron 30.0%
TCTTGGATATTAAGGAATGA+AGG + chr4_1:63515842-63515861 Msa0563210:intron 30.0%
! ATATGTTTCTGTGTGATAGA+AGG + chr4_1:63515871-63515890 Msa0563210:intron 30.0%
! TATGTTTCTGTGTGATAGAA+GGG + chr4_1:63515872-63515891 Msa0563210:intron 30.0%
!!! TTTTTTTTTTTTTGGAGGGG+GGG + chr4_1:63515963-63515982 Msa0563210:intron 30.0%
! GTTTTGTAGGTTATTGTTGA+AGG + chr4_1:63516083-63516102 Msa0563210:intron 30.0%
GTAATCAATGATTGTGTGAA+AGG + chr4_1:63516211-63516230 Msa0563210:intron 30.0%
ATTTGTAATGTTTGCGACAA+TGG + chr4_1:63516276-63516295 Msa0563210:intron 30.0%
!! CAAGAGCACACAAATATTTT+CGG - chr4_1:63516305-63516324 None:intergenic 30.0%
AAAATTGTTCATTCACCACT+TGG - chr4_1:63516393-63516412 None:intergenic 30.0%
GATAACAAGCTGAAAATTAG+TGG - chr4_1:63516515-63516534 None:intergenic 30.0%
!! TTCTTTGCTTCCTTTTAACT+AGG - chr4_1:63516587-63516606 None:intergenic 30.0%
ACCAGAATATCCTAAAGTAT+AGG + chr4_1:63516731-63516750 Msa0563210:three_prime_UTR 30.0%
!! TCCTATACTTTAGGATATTC+TGG - chr4_1:63516735-63516754 None:intergenic 30.0%
TCATATTACTTGCATATCCA+TGG + chr4_1:63516822-63516841 Msa0563210:intron 30.0%
TTGCATATCCATGGAATATT+TGG + chr4_1:63516831-63516850 Msa0563210:intron 30.0%
ATGTGGTAATTCTTCATGAA+TGG + chr4_1:63516903-63516922 Msa0563210:intron 30.0%
TTCTTCATGAATGGTATATG+TGG + chr4_1:63516912-63516931 Msa0563210:intron 30.0%
!!! TTAGTTTTTTCTCCTTTGTC+CGG + chr4_1:63517030-63517049 Msa0563210:intron 30.0%
!!! CCAGTTTTTTATATTAGGTC+CGG + chr4_1:63517186-63517205 Msa0563210:intron 30.0%
ACAGCAAAGCTATATATTAC+CGG - chr4_1:63517208-63517227 None:intergenic 30.0%
TTATAATATGCTGTCAAGTC+TGG + chr4_1:63517446-63517465 Msa0563210:three_prime_UTR 30.0%
!! AAAGTAGGTCTTATTGTGAT+TGG + chr4_1:63517473-63517492 Msa0563210:three_prime_UTR 30.0%
!! TCCCTTTTTCACACATAATT+TGG + chr4_1:63517705-63517724 Msa0563210:intron 30.0%
GCCAAATTATGTGTGAAAAA+GGG - chr4_1:63517709-63517728 None:intergenic 30.0%
AGCCAAATTATGTGTGAAAA+AGG - chr4_1:63517710-63517729 None:intergenic 30.0%
CAACCCAAAAGTAAATTGTT+TGG + chr4_1:63517739-63517758 Msa0563210:intron 30.0%
! GAACATGAAATTTTGCAGTT+TGG + chr4_1:63517984-63518003 Msa0563210:intron 30.0%
! ACATGAAATTTTGCAGTTTG+GGG + chr4_1:63517986-63518005 Msa0563210:intron 30.0%
ATGGAATTTGGCTATTATCT+AGG + chr4_1:63518133-63518152 Msa0563210:intron 30.0%
!! GTTGATTTTAATCATTAGGG+TGG + chr4_1:63518243-63518262 Msa0563210:intron 30.0%
CATTTAAATGGCAAAGAGAT+GGG - chr4_1:63518326-63518345 None:intergenic 30.0%
TCATTTAAATGGCAAAGAGA+TGG - chr4_1:63518327-63518346 None:intergenic 30.0%
AACACTACCACTCATTTAAA+TGG - chr4_1:63518338-63518357 None:intergenic 30.0%
TTACCACGAAAACGAGTTTA+AGG + chr4_1:63512062-63512081 Msa0563210:CDS 35.0%
AGTCCAATTTGGAAGTTTCA+AGG + chr4_1:63512091-63512110 Msa0563210:CDS 35.0%
AGATTCCAGAGATAGGATTA+GGG + chr4_1:63512173-63512192 Msa0563210:CDS 35.0%
ATGATGAGGAAATGCCTAAA+AGG + chr4_1:63512829-63512848 Msa0563210:CDS 35.0%
!! AGCCCCAATGATTCTAAAAT+AGG + chr4_1:63512906-63512925 Msa0563210:CDS 35.0%
!! CCCAATGATTCTAAAATAGG+TGG + chr4_1:63512909-63512928 Msa0563210:CDS 35.0%
!! GAAGAAAGAAGTGTTAACCA+TGG + chr4_1:63512966-63512985 Msa0563210:CDS 35.0%
! TCCTGGTATTGAATCAGAAA+AGG + chr4_1:63513013-63513032 Msa0563210:CDS 35.0%
! TCCTTTTCTGATTCAATACC+AGG - chr4_1:63513017-63513036 None:intergenic 35.0%
TATATGGACATTGATGTTCG+AGG + chr4_1:63513041-63513060 Msa0563210:CDS 35.0%
!! GAACATACGGTGTTGTATAT+AGG + chr4_1:63513225-63513244 Msa0563210:CDS 35.0%
GGAAGTTGTAGCATTAAAGA+AGG + chr4_1:63513268-63513287 Msa0563210:CDS 35.0%
AGCATTAAAGAAGGTCAAGA+TGG + chr4_1:63513277-63513296 Msa0563210:CDS 35.0%
AAGATGGAGAAGGAAAAAGA+AGG + chr4_1:63513293-63513312 Msa0563210:CDS 35.0%
CCTTGACATCAACTATGTAT+GGG - chr4_1:63513370-63513389 None:intergenic 35.0%
TCCTTGACATCAACTATGTA+TGG - chr4_1:63513371-63513390 None:intergenic 35.0%
!! TAGCCTTGACAGTATTTTCA+TGG + chr4_1:63513406-63513425 Msa0563210:CDS 35.0%
TTCACTTCACTTTGGCTAAA+TGG - chr4_1:63513485-63513504 None:intergenic 35.0%
TAAGCACTTTCACTTCACTT+TGG - chr4_1:63513493-63513512 None:intergenic 35.0%
! TGAAGTATCTTCATGACAAC+TGG + chr4_1:63513535-63513554 Msa0563210:intron 35.0%
! GAAGTATCTTCATGACAACT+GGG + chr4_1:63513536-63513555 Msa0563210:intron 35.0%
AGGTGAGTATATGGTTTCAA+AGG - chr4_1:63513657-63513676 None:intergenic 35.0%
! TTTGAAACCATATACTCACC+TGG + chr4_1:63513656-63513675 Msa0563210:CDS 35.0%
! ACGTGTGAATTTGATAACTG+CGG + chr4_1:63513813-63513832 Msa0563210:intron 35.0%
TAAAGGAAAGGGTAAGTAGT+AGG - chr4_1:63513935-63513954 None:intergenic 35.0%
TACTACTTACCCTTTCCTTT+AGG + chr4_1:63513934-63513953 Msa0563210:intron 35.0%
AAACATTGCTGCACATTCAA+AGG - chr4_1:63513983-63514002 None:intergenic 35.0%
TGTGTTAAACACATACGTGA+AGG - chr4_1:63514079-63514098 None:intergenic 35.0%
GAAACATATAGACAACCATC+AGG - chr4_1:63514142-63514161 None:intergenic 35.0%
TGGTTGTCTATATGTTTCTC+AGG + chr4_1:63514144-63514163 Msa0563210:intron 35.0%
GGTTGTCTATATGTTTCTCA+GGG + chr4_1:63514145-63514164 Msa0563210:intron 35.0%
ACTCAACAGCTATTGATATG+TGG + chr4_1:63514198-63514217 Msa0563210:CDS 35.0%
ACCGTTGTTCAATGGAAAAA+CGG + chr4_1:63514259-63514278 Msa0563210:CDS 35.0%
!! TCCGTTTTTCCATTGAACAA+CGG - chr4_1:63514263-63514282 None:intergenic 35.0%
!! TTGCAGATTTTCAGGATACT+TGG + chr4_1:63514437-63514456 Msa0563210:intron 35.0%
GCACTCCAAATGAAACAATA+TGG + chr4_1:63514459-63514478 Msa0563210:CDS 35.0%
AGGAAATCATGAGTACTTAC+TGG - chr4_1:63514532-63514551 None:intergenic 35.0%
AATCCAGAATCAGAAAGAAC+TGG - chr4_1:63514772-63514791 None:intergenic 35.0%
! CAAGTGAACTTTACCTTTTC+AGG - chr4_1:63514826-63514845 None:intergenic 35.0%
!!! TTTTTAAGTAGCTTGTCCCT+AGG + chr4_1:63515065-63515084 Msa0563210:intron 35.0%
!! TTTTAAGTAGCTTGTCCCTA+GGG + chr4_1:63515066-63515085 Msa0563210:intron 35.0%
AGATTCATGATGTTAACAGG+CGG + chr4_1:63515165-63515184 Msa0563210:intron 35.0%
ATCAATGCAAACATTCTGTG+TGG - chr4_1:63515332-63515351 None:intergenic 35.0%
! ACAGAATGTTTGCATTGATG+AGG + chr4_1:63515333-63515352 Msa0563210:three_prime_UTR 35.0%
!!! ACTCCTGCTATTTTTTTAGC+AGG + chr4_1:63515405-63515424 Msa0563210:three_prime_UTR 35.0%
!!! TTTTTTTAGCAGGAGCTTGT+TGG + chr4_1:63515415-63515434 Msa0563210:three_prime_UTR 35.0%
!!! TTCTGGAACCAGATTTTTTC+AGG + chr4_1:63515464-63515483 Msa0563210:three_prime_UTR 35.0%
!! TGGCATAACCTTCTGAAATT+AGG + chr4_1:63515551-63515570 Msa0563210:three_prime_UTR 35.0%
! ACTGACTTCCTAATTTCAGA+AGG - chr4_1:63515562-63515581 None:intergenic 35.0%
CATATTGTGTATGCAAGAGA+CGG + chr4_1:63515726-63515745 Msa0563210:three_prime_UTR 35.0%
TTTCGTTGGAGAAAATGACA+TGG + chr4_1:63515781-63515800 Msa0563210:three_prime_UTR 35.0%
! GCAGGGTAACTTTAGATTTT+GGG - chr4_1:63515906-63515925 None:intergenic 35.0%
! AGCAGGGTAACTTTAGATTT+TGG - chr4_1:63515907-63515926 None:intergenic 35.0%
!!! TTTTTTTTTTTTGGAGGGGG+GGG + chr4_1:63515964-63515983 Msa0563210:intron 35.0%
GTTATGATGAAGAAATGCAC+AGG - chr4_1:63515997-63516016 None:intergenic 35.0%
!!! TTACGTGAACGTAGTTTTGT+AGG + chr4_1:63516070-63516089 Msa0563210:intron 35.0%
! CACATGCTAAAAGATTTTCC+CGG + chr4_1:63516166-63516185 Msa0563210:intron 35.0%
ACTCTTAAAGAAACACTACC+GGG - chr4_1:63516187-63516206 None:intergenic 35.0%
CACTCTTAAAGAAACACTAC+CGG - chr4_1:63516188-63516207 None:intergenic 35.0%
TCTTAATGCTGATCATGTTG+AGG + chr4_1:63516367-63516386 Msa0563210:intron 35.0%
!!! CATTTTTTTCTCACAGGAAG+AGG - chr4_1:63516490-63516509 None:intergenic 35.0%
!!! GTGGTACATTTTTTTCTCAC+AGG - chr4_1:63516496-63516515 None:intergenic 35.0%
! TAGAGGTACAATGCAAATCT+TGG + chr4_1:63516782-63516801 Msa0563210:intron 35.0%
AATTCTGGCCAAATATTCCA+TGG - chr4_1:63516842-63516861 None:intergenic 35.0%
TTCATGAATGGTATATGTGG+TGG + chr4_1:63516915-63516934 Msa0563210:intron 35.0%
ATGATATATCTTCCAGAGCA+AGG + chr4_1:63516964-63516983 Msa0563210:intron 35.0%
!!! TAGTTTTTTCTCCTTTGTCC+GGG + chr4_1:63517031-63517050 Msa0563210:intron 35.0%
!! TGAATTTGATTTGGAGGGTT+GGG - chr4_1:63517110-63517129 None:intergenic 35.0%
!! ATGAATTTGATTTGGAGGGT+TGG - chr4_1:63517111-63517130 None:intergenic 35.0%
CCGGACCTAATATAAAAAAC+TGG - chr4_1:63517189-63517208 None:intergenic 35.0%
GAAATTGTTCACAGTGAACA+TGG - chr4_1:63517238-63517257 None:intergenic 35.0%
TTACAAGACACCAAAATTCC+CGG + chr4_1:63517328-63517347 Msa0563210:three_prime_UTR 35.0%
! AACATAAGAACCGGGAATTT+TGG - chr4_1:63517341-63517360 None:intergenic 35.0%
AAAGTCAGAACATAAGAACC+GGG - chr4_1:63517349-63517368 None:intergenic 35.0%
GAAAGTCAGAACATAAGAAC+CGG - chr4_1:63517350-63517369 None:intergenic 35.0%
TCTTATGTTCTGACTTTCGA+TGG + chr4_1:63517352-63517371 Msa0563210:three_prime_UTR 35.0%
CTTATGTTCTGACTTTCGAT+GGG + chr4_1:63517353-63517372 Msa0563210:three_prime_UTR 35.0%
AAGTATTAGACACAACTGGA+AGG - chr4_1:63517395-63517414 None:intergenic 35.0%
! GGTAAAGTATTAGACACAAC+TGG - chr4_1:63517399-63517418 None:intergenic 35.0%
TCAAGGAAAAAAACATGGGT+GGG - chr4_1:63517581-63517600 None:intergenic 35.0%
AGCCTCAAGGAAAAAAACAT+GGG - chr4_1:63517585-63517604 None:intergenic 35.0%
AAGCCTCAAGGAAAAAAACA+TGG - chr4_1:63517586-63517605 None:intergenic 35.0%
AACAGATAATTGAAGCCTCA+AGG - chr4_1:63517598-63517617 None:intergenic 35.0%
TTATCTGTTACTCCCAATGA+TGG + chr4_1:63517609-63517628 Msa0563210:intron 35.0%
TATCTGTTACTCCCAATGAT+GGG + chr4_1:63517610-63517629 Msa0563210:intron 35.0%
TGTTCTGCAGTTTAGTATTG+AGG + chr4_1:63517671-63517690 Msa0563210:intron 35.0%
ACTATACAGTAAGCATATCC+TGG + chr4_1:63517918-63517937 Msa0563210:intron 35.0%
CTATACAGTAAGCATATCCT+GGG + chr4_1:63517919-63517938 Msa0563210:intron 35.0%
GTGAAAGGTTAAAAAAACCC+AGG - chr4_1:63517939-63517958 None:intergenic 35.0%
!!! GGTTTTTTTAACCTTTCACG+CGG + chr4_1:63517940-63517959 Msa0563210:intron 35.0%
!! AAATTTTGCAGTTTGGGGTA+AGG + chr4_1:63517991-63518010 Msa0563210:intron 35.0%
TGTTCCCATTTATGCTCAAT+TGG + chr4_1:63518029-63518048 Msa0563210:intron 35.0%
TCCACCAATTGAGCATAAAT+GGG - chr4_1:63518036-63518055 None:intergenic 35.0%
ATCCACCAATTGAGCATAAA+TGG - chr4_1:63518037-63518056 None:intergenic 35.0%
GTTTGCTTGATCTTGTCTTA+AGG + chr4_1:63518209-63518228 Msa0563210:intron 35.0%
! TTGTCTTAAGGTGTTTCTCA+TGG + chr4_1:63518221-63518240 Msa0563210:intron 35.0%
! CTCTTTGCCATTTAAATGAG+TGG + chr4_1:63518328-63518347 Msa0563210:three_prime_UTR 35.0%
! GATCCTTAAACTCGTTTTCG+TGG - chr4_1:63512068-63512087 None:intergenic 40.0%
TAAGGATCACGAGTCCAATT+TGG + chr4_1:63512080-63512099 Msa0563210:CDS 40.0%
CCAATTTGGAAGTTTCAAGG+CGG + chr4_1:63512094-63512113 Msa0563210:CDS 40.0%
CAATTTGGAAGTTTCAAGGC+GGG + chr4_1:63512095-63512114 Msa0563210:CDS 40.0%
AATTTGGAAGTTTCAAGGCG+GGG + chr4_1:63512096-63512115 Msa0563210:CDS 40.0%
AGTATGATCCGGTTAGGAAT+GGG + chr4_1:63512136-63512155 Msa0563210:CDS 40.0%
GAGATTCCAGAGATAGGATT+AGG + chr4_1:63512172-63512191 Msa0563210:CDS 40.0%
! GTGCTATTGAATCTGAGTCT+GGG + chr4_1:63512373-63512392 Msa0563210:CDS 40.0%
TGCTATTGAATCTGAGTCTG+GGG + chr4_1:63512374-63512393 Msa0563210:CDS 40.0%
! GAAATTTTCGCCCATTGTGT+GGG + chr4_1:63512437-63512456 Msa0563210:CDS 40.0%
ACAGTAACCTTAGATGCTGT+GGG - chr4_1:63512639-63512658 None:intergenic 40.0%
AACAGTAACCTTAGATGCTG+TGG - chr4_1:63512640-63512659 None:intergenic 40.0%
ACAAGGACTGAGTTAAGGAA+GGG - chr4_1:63512674-63512693 None:intergenic 40.0%
TCATTACCCCATGTCTGTTT+CGG - chr4_1:63512699-63512718 None:intergenic 40.0%
AGATAACTCTCCTGTTGATG+AGG + chr4_1:63512794-63512813 Msa0563210:CDS 40.0%
! GATAACTCTCCTGTTGATGA+GGG + chr4_1:63512795-63512814 Msa0563210:CDS 40.0%
AGGAAATGCCTAAAAGGAAG+AGG + chr4_1:63512835-63512854 Msa0563210:CDS 40.0%
!! GTTAGTCTCCTCTTCCTTTT+AGG - chr4_1:63512846-63512865 None:intergenic 40.0%
TTCTTCCGAATCAGATGATC+TGG - chr4_1:63512952-63512971 None:intergenic 40.0%
TTCTGTATCTGAGTGACTAC+TGG - chr4_1:63513081-63513100 None:intergenic 40.0%
CTTTAATGCTACAACTTCCC+CGG - chr4_1:63513267-63513286 None:intergenic 40.0%
AAAGAAGGTCAAGATGGAGA+AGG + chr4_1:63513283-63513302 Msa0563210:CDS 40.0%
ATTTCCCTAAGAGAAGTCAG+CGG - chr4_1:63513323-63513342 None:intergenic 40.0%
AACTATGTATGGGTGGTGAA+AGG - chr4_1:63513360-63513379 None:intergenic 40.0%
TGACATCAACTATGTATGGG+TGG - chr4_1:63513367-63513386 None:intergenic 40.0%
! CCCATACATAGTTGATGTCA+AGG + chr4_1:63513367-63513386 Msa0563210:CDS 40.0%
! AGTTGATGTCAAGGAAGTAG+TGG + chr4_1:63513376-63513395 Msa0563210:CDS 40.0%
! ACTTCACACCTTCTAAAAGC+TGG - chr4_1:63513521-63513540 None:intergenic 40.0%
! CACCCCTGTTATTTAAAAGC+AGG - chr4_1:63513590-63513609 None:intergenic 40.0%
!! TTTGGTTTGGCTCGTCAATA+TGG + chr4_1:63513627-63513646 Msa0563210:CDS 40.0%
!! TTGGTTTGGCTCGTCAATAT+GGG + chr4_1:63513628-63513647 Msa0563210:CDS 40.0%
ATTGCTGCACATTCAAAGGA+AGG - chr4_1:63513979-63513998 None:intergenic 40.0%
GCTATTGATATGTGGTCTCT+TGG + chr4_1:63514206-63514225 Msa0563210:CDS 40.0%
GTGGTCTCTTGGTTGTATAA+TGG + chr4_1:63514217-63514236 Msa0563210:CDS 40.0%
AATGGCTGAGCTATTGTCTA+AGG + chr4_1:63514235-63514254 Msa0563210:CDS 40.0%
TCTAAGGAACCGTTGTTCAA+TGG + chr4_1:63514251-63514270 Msa0563210:CDS 40.0%
GGAATTCGATCAACTTGACA+AGG + chr4_1:63514280-63514299 Msa0563210:CDS 40.0%
CCTGGCCATATTGTTTCATT+TGG - chr4_1:63514467-63514486 None:intergenic 40.0%
CCAAATGAAACAATATGGCC+AGG + chr4_1:63514464-63514483 Msa0563210:CDS 40.0%
CTCAAAATTACCTGGAGTCA+AGG + chr4_1:63514490-63514509 Msa0563210:CDS 40.0%
ACAAAATTGACCTTGACTCC+AGG - chr4_1:63514503-63514522 None:intergenic 40.0%
GTAACAGTACAAGTCACCAA+GGG - chr4_1:63514656-63514675 None:intergenic 40.0%
TGTAACAGTACAAGTCACCA+AGG - chr4_1:63514657-63514676 None:intergenic 40.0%
CGCAGAAGATTATACCTGAA+AGG - chr4_1:63514715-63514734 None:intergenic 40.0%
TCTCCAGTTCTTTCTGATTC+TGG + chr4_1:63514766-63514785 Msa0563210:CDS 40.0%
!! CCTTTTCAGGGTCATAAGTT+AGG - chr4_1:63514813-63514832 None:intergenic 40.0%
CCTAACTTATGACCCTGAAA+AGG + chr4_1:63514810-63514829 Msa0563210:CDS 40.0%
ACACCTACTATTGTATGCAG+CGG + chr4_1:63514892-63514911 Msa0563210:intron 40.0%
GAACCATTCATGATTCAGAG+CGG - chr4_1:63514931-63514950 None:intergenic 40.0%
AATTCTTTGCTCTTGGGAAG+AGG - chr4_1:63514963-63514982 None:intergenic 40.0%
GGCATGAATTCTTTGCTCTT+GGG - chr4_1:63514969-63514988 None:intergenic 40.0%
AGGCATGAATTCTTTGCTCT+TGG - chr4_1:63514970-63514989 None:intergenic 40.0%
AGGACAGGTATTTGATCTAC+TGG + chr4_1:63515012-63515031 Msa0563210:intron 40.0%
! TTTAAGTAGCTTGTCCCTAG+GGG + chr4_1:63515067-63515086 Msa0563210:intron 40.0%
! ATGTTTGCATTGATGAGGTG+AGG + chr4_1:63515338-63515357 Msa0563210:three_prime_UTR 40.0%
AGGTGAGGATATGTACTGAA+CGG + chr4_1:63515353-63515372 Msa0563210:three_prime_UTR 40.0%
GCTCCTGCTAAAAAAATAGC+AGG - chr4_1:63515411-63515430 None:intergenic 40.0%
AGGTTAACATTCTTCGTGCT+TGG + chr4_1:63515484-63515503 Msa0563210:three_prime_UTR 40.0%
CTAATGTCTCTCTTCTAGCA+GGG - chr4_1:63515923-63515942 None:intergenic 40.0%
TCTAATGTCTCTCTTCTAGC+AGG - chr4_1:63515924-63515943 None:intergenic 40.0%
GGAATGCTAGTGAAACATAG+TGG - chr4_1:63516469-63516488 None:intergenic 40.0%
GTTCTACAACACACTAGATG+GGG - chr4_1:63516537-63516556 None:intergenic 40.0%
GGTTCTACAACACACTAGAT+GGG - chr4_1:63516538-63516557 None:intergenic 40.0%
AGGTTCTACAACACACTAGA+TGG - chr4_1:63516539-63516558 None:intergenic 40.0%
AAGATTGACGTTTGGGAACA+AGG + chr4_1:63516639-63516658 Msa0563210:intron 40.0%
! AAGGCTGCAACATTGTTGTT+GGG + chr4_1:63516983-63517002 Msa0563210:intron 40.0%
!! CACAACTGGTTTGAGTTAAG+GGG - chr4_1:63517084-63517103 None:intergenic 40.0%
!! GCACAACTGGTTTGAGTTAA+GGG - chr4_1:63517085-63517104 None:intergenic 40.0%
!! AGCACAACTGGTTTGAGTTA+AGG - chr4_1:63517086-63517105 None:intergenic 40.0%
AAACTGGTCAGAGTAAGATC+AGG - chr4_1:63517173-63517192 None:intergenic 40.0%
TATTAGACACAACTGGAAGG+TGG - chr4_1:63517392-63517411 None:intergenic 40.0%
GTCAAGTCTGGTCATAAAGT+AGG + chr4_1:63517458-63517477 Msa0563210:three_prime_UTR 40.0%
CTCAAGGAAAAAAACATGGG+TGG - chr4_1:63517582-63517601 None:intergenic 40.0%
!!! CACCCATGTTTTTTTCCTTG+AGG + chr4_1:63517580-63517599 Msa0563210:intron 40.0%
! TCTGCAGTTTAGTATTGAGG+TGG + chr4_1:63517674-63517693 Msa0563210:intron 40.0%
! CTGCAGTTTAGTATTGAGGT+GGG + chr4_1:63517675-63517694 Msa0563210:intron 40.0%
! TGCAGTTTAGTATTGAGGTG+GGG + chr4_1:63517676-63517695 Msa0563210:intron 40.0%
ATTCCAAACTTGCGACAACT+AGG - chr4_1:63517793-63517812 None:intergenic 40.0%
! TGTCGCAAGTTTGGAATAGT+TGG + chr4_1:63517796-63517815 Msa0563210:three_prime_UTR 40.0%
! GTCGCAAGTTTGGAATAGTT+GGG + chr4_1:63517797-63517816 Msa0563210:three_prime_UTR 40.0%
! CAAGTTTGGAATAGTTGGGT+CGG + chr4_1:63517801-63517820 Msa0563210:three_prime_UTR 40.0%
! AAGTTTGGAATAGTTGGGTC+GGG + chr4_1:63517802-63517821 Msa0563210:three_prime_UTR 40.0%
! ATGTAAAGCATCCACACTGA+TGG + chr4_1:63517895-63517914 Msa0563210:three_prime_UTR 40.0%
TACTGTATAGTCCATCAGTG+TGG - chr4_1:63517909-63517928 None:intergenic 40.0%
TCCCATTTATGCTCAATTGG+TGG + chr4_1:63518032-63518051 Msa0563210:intron 40.0%
AATCATTAGGGTGGAATGTG+TGG + chr4_1:63518252-63518271 Msa0563210:intron 40.0%
ATCATTAGGGTGGAATGTGT+GGG + chr4_1:63518253-63518272 Msa0563210:intron 40.0%
! GTGAACCAACATTTGGGTTA+AGG - chr4_1:63518304-63518323 None:intergenic 40.0%
AGATGGGTGAACCAACATTT+GGG - chr4_1:63518310-63518329 None:intergenic 40.0%
TGCGTAGGGTAAAACCTTAT+AGG + chr4_1:63518357-63518376 Msa0563210:three_prime_UTR 40.0%
CCGCCTTGAAACTTCCAAAT+TGG - chr4_1:63512097-63512116 None:intergenic 45.0%
! CGAAAGAGTATGATCCGGTT+AGG + chr4_1:63512130-63512149 Msa0563210:CDS 45.0%
GAGTATGATCCGGTTAGGAA+TGG + chr4_1:63512135-63512154 Msa0563210:CDS 45.0%
GTATGATCCGGTTAGGAATG+GGG + chr4_1:63512137-63512156 Msa0563210:CDS 45.0%
TATGATCCGGTTAGGAATGG+GGG + chr4_1:63512138-63512157 Msa0563210:CDS 45.0%
ATTATCGGTCATCTTCCAGC+CGG + chr4_1:63512244-63512263 Msa0563210:CDS 45.0%
ACTTCGCAGAAAAACCACAC+CGG - chr4_1:63512305-63512324 None:intergenic 45.0%
!! GGTGCTATTGAATCTGAGTC+TGG + chr4_1:63512372-63512391 Msa0563210:CDS 45.0%
! GGAAATTTTCGCCCATTGTG+TGG + chr4_1:63512436-63512455 Msa0563210:CDS 45.0%
TCATCCTGATCCCACACAAT+GGG - chr4_1:63512450-63512469 None:intergenic 45.0%
TCAGGATGACAAGGAAGTGA+AGG + chr4_1:63512461-63512480 Msa0563210:CDS 45.0%
CAGGATGACAAGGAAGTGAA+GGG + chr4_1:63512462-63512481 Msa0563210:CDS 45.0%
AGGATGACAAGGAAGTGAAG+GGG + chr4_1:63512463-63512482 Msa0563210:CDS 45.0%
! AGCGACAGAACAGACGATTT+TGG - chr4_1:63512549-63512568 None:intergenic 45.0%
AAGTTCAAGTGCGTTCTGTC+AGG + chr4_1:63512586-63512605 Msa0563210:CDS 45.0%
TGTCAGGAACAGGGAAACTA+GGG + chr4_1:63512602-63512621 Msa0563210:CDS 45.0%
TGAGTTTCCCACAGCATCTA+AGG + chr4_1:63512629-63512648 Msa0563210:CDS 45.0%
CAAGGACTGAGTTAAGGAAG+GGG - chr4_1:63512673-63512692 None:intergenic 45.0%
GACAAGGACTGAGTTAAGGA+AGG - chr4_1:63512675-63512694 None:intergenic 45.0%
CTTGTCACCGAAACAGACAT+GGG + chr4_1:63512689-63512708 Msa0563210:CDS 45.0%
TTGTCACCGAAACAGACATG+GGG + chr4_1:63512690-63512709 Msa0563210:CDS 45.0%
ACAGACATGGGGTAATGATC+AGG + chr4_1:63512701-63512720 Msa0563210:CDS 45.0%
GGAACATAATCCTCACCTTC+TGG - chr4_1:63512738-63512757 None:intergenic 45.0%
AGAATCTCACCCTCATCAAC+AGG - chr4_1:63512807-63512826 None:intergenic 45.0%
GGGTGAGATTCTCAATGATG+AGG + chr4_1:63512815-63512834 Msa0563210:CDS 45.0%
! GAGACTAACTCCTGAGGTTT+TGG + chr4_1:63512857-63512876 Msa0563210:CDS 45.0%
ACTCTAGTCTCCAAAACCTC+AGG - chr4_1:63512870-63512889 None:intergenic 45.0%
!!! AGGTTTTGGAGACTAGAGTG+AGG + chr4_1:63512871-63512890 Msa0563210:CDS 45.0%
TCGAGCCAGATCATCTGATT+CGG + chr4_1:63512944-63512963 Msa0563210:CDS 45.0%
TCCAGCTCAACCTCAAAGAA+CGG + chr4_1:63513139-63513158 Msa0563210:CDS 45.0%
AGCATGTTGACCGTTCTTTG+AGG - chr4_1:63513152-63513171 None:intergenic 45.0%
AAGAACGGTCAACATGCTTC+AGG + chr4_1:63513154-63513173 Msa0563210:CDS 45.0%
AGAACGGTCAACATGCTTCA+GGG + chr4_1:63513155-63513174 Msa0563210:CDS 45.0%
AGGGCCAAAGATAAGAAGAC+CGG + chr4_1:63513245-63513264 Msa0563210:CDS 45.0%
TTCCCCGGTCTTCTTATCTT+TGG - chr4_1:63513252-63513271 None:intergenic 45.0%
TTTCCCTAAGAGAAGTCAGC+GGG - chr4_1:63513322-63513341 None:intergenic 45.0%
GATGTCAAGGAAGTAGTGGT+TGG + chr4_1:63513380-63513399 Msa0563210:CDS 45.0%
ATGACAACTGGGTGCTTCAT+AGG + chr4_1:63513547-63513566 Msa0563210:intron 45.0%
TGACAACTGGGTGCTTCATA+GGG + chr4_1:63513548-63513567 Msa0563210:intron 45.0%
GAAACCATATACTCACCTGG+TGG + chr4_1:63513659-63513678 Msa0563210:CDS 45.0%
GTAACCACCAGGTGAGTATA+TGG - chr4_1:63513666-63513685 None:intergenic 45.0%
TGTACCAAAGAGTAACCACC+AGG - chr4_1:63513677-63513696 None:intergenic 45.0%
TGGTGGTTACTCTTTGGTAC+AGG + chr4_1:63513676-63513695 Msa0563210:CDS 45.0%
!! CCAGGTAATTTTGAGAAGCC+TGG - chr4_1:63514485-63514504 None:intergenic 45.0%
CCAGGCTTCTCAAAATTACC+TGG + chr4_1:63514482-63514501 Msa0563210:CDS 45.0%
! TTTTCTGCCACTGTTTTCCC+AGG + chr4_1:63514591-63514610 Msa0563210:intron 45.0%
! TTTTCCCAGGCTTCCAACTT+TGG + chr4_1:63514604-63514623 Msa0563210:intron 45.0%
TTTCCCAGGCTTCCAACTTT+GGG + chr4_1:63514605-63514624 Msa0563210:intron 45.0%
! CTTCCAACTTTGGGTGGTTT+TGG + chr4_1:63514614-63514633 Msa0563210:intron 45.0%
AGACCAAAACCACCCAAAGT+TGG - chr4_1:63514620-63514639 None:intergenic 45.0%
ACGACCGAAATGTTCCTTTC+AGG + chr4_1:63514698-63514717 Msa0563210:intron 45.0%
TTTCCTGCCACATCATTCAC+TGG + chr4_1:63514742-63514761 Msa0563210:CDS 45.0%
TGGAGATCCAGTGAATGATG+TGG - chr4_1:63514752-63514771 None:intergenic 45.0%
GATCCGCTGCATACAATAGT+AGG - chr4_1:63514898-63514917 None:intergenic 45.0%
CTATTGTATGCAGCGGATCA+CGG + chr4_1:63514899-63514918 Msa0563210:intron 45.0%
! AAGCCGCTCTGAATCATGAA+TGG + chr4_1:63514925-63514944 Msa0563210:CDS 45.0%
TCTTGGGAAGAGGAACTTCA+CGG - chr4_1:63514953-63514972 None:intergenic 45.0%
GCATGTTGAGCAGGAAATGT+AGG - chr4_1:63514990-63515009 None:intergenic 45.0%
ATTTCCTGCTCAACATGCTC+AGG + chr4_1:63514992-63515011 Msa0563210:CDS 45.0%
! TTAAGTAGCTTGTCCCTAGG+GGG + chr4_1:63515068-63515087 Msa0563210:intron 45.0%
! TGTGCTTTTCTATCCCCCTA+GGG - chr4_1:63515084-63515103 None:intergenic 45.0%
ATGATGTTAACAGGCGGATG+CGG + chr4_1:63515171-63515190 Msa0563210:intron 45.0%
!! TTGGGGACTGGTGGAATTTT+TGG + chr4_1:63515257-63515276 Msa0563210:CDS 45.0%
TTGTGTATGCAAGAGACGGT+TGG + chr4_1:63515730-63515749 Msa0563210:three_prime_UTR 45.0%
TCTCCAACGAAATGCACAGA+AGG - chr4_1:63515773-63515792 None:intergenic 45.0%
ACCGTCTGAAGATTGACGTT+TGG + chr4_1:63516631-63516650 Msa0563210:intron 45.0%
CCCAAACGTCAATCTTCAGA+CGG - chr4_1:63516635-63516654 None:intergenic 45.0%
CCGTCTGAAGATTGACGTTT+GGG + chr4_1:63516632-63516651 Msa0563210:intron 45.0%
ACTGCAGTATCAAAGCAAGC+AGG + chr4_1:63516697-63516716 Msa0563210:intron 45.0%
GTATCAAAGCAAGCAGGTTG+AGG + chr4_1:63516703-63516722 Msa0563210:intron 45.0%
TTGTCCTTCAGACTCTCTAG+AGG + chr4_1:63516765-63516784 Msa0563210:three_prime_UTR 45.0%
! TGTACCTCTAGAGAGTCTGA+AGG - chr4_1:63516772-63516791 None:intergenic 45.0%
CAAGGCTGCAACATTGTTGT+TGG + chr4_1:63516982-63517001 Msa0563210:intron 45.0%
TGAGTTAAGGGGTAAGGAGT+TGG - chr4_1:63517073-63517092 None:intergenic 45.0%
! CTGGTTTGAGTTAAGGGGTA+AGG - chr4_1:63517079-63517098 None:intergenic 45.0%
TGGTCAGAGTAAGATCAGGA+AGG - chr4_1:63517169-63517188 None:intergenic 45.0%
!! ACTTTTGCACGCTTGCTACA+AGG + chr4_1:63517288-63517307 Msa0563210:three_prime_UTR 45.0%
! GCAGTTTAGTATTGAGGTGG+GGG + chr4_1:63517677-63517696 Msa0563210:intron 45.0%
TTATTCACACAGCTGCGAGA+TGG + chr4_1:63517860-63517879 Msa0563210:three_prime_UTR 45.0%
TATTCACACAGCTGCGAGAT+GGG + chr4_1:63517861-63517880 Msa0563210:three_prime_UTR 45.0%
GTGGGTATCACCTACACAAT+CGG + chr4_1:63518271-63518290 Msa0563210:three_prime_UTR 45.0%
GCACTCCTTAACCCAAATGT+TGG + chr4_1:63518296-63518315 Msa0563210:three_prime_UTR 45.0%
GAGATGGGTGAACCAACATT+TGG - chr4_1:63518311-63518330 None:intergenic 45.0%
! AATGAGTGGTAGTGTTGCGT+AGG + chr4_1:63518342-63518361 Msa0563210:three_prime_UTR 45.0%
! ATGAGTGGTAGTGTTGCGTA+GGG + chr4_1:63518343-63518362 Msa0563210:three_prime_UTR 45.0%
!!! CATTTTAATTTTAATTTTAT+TGG + chr4_1:63515614-63515633 Msa0563210:three_prime_UTR 5.0%
!!! ATATATATATTTTTTATCTA+TGG + chr4_1:63517551-63517570 Msa0563210:intron 5.0%
ATGATCCGGTTAGGAATGGG+GGG + chr4_1:63512139-63512158 Msa0563210:CDS 50.0%
CCTCACCCTAATCCTATCTC+TGG - chr4_1:63512181-63512200 None:intergenic 50.0%
CCAGAGATAGGATTAGGGTG+AGG + chr4_1:63512178-63512197 Msa0563210:CDS 50.0%
TAGGATTAGGGTGAGGCAGA+AGG + chr4_1:63512185-63512204 Msa0563210:CDS 50.0%
GGTGAGGCAGAAGGATGTTA+GGG + chr4_1:63512194-63512213 Msa0563210:CDS 50.0%
AAGTCAACCGATAGAGAGCC+TGG + chr4_1:63512321-63512340 Msa0563210:CDS 50.0%
AAGCTCACCAGGCTCTCTAT+CGG - chr4_1:63512331-63512350 None:intergenic 50.0%
GTGAGCTTTCCAGTGAGAGT+GGG + chr4_1:63512343-63512362 Msa0563210:CDS 50.0%
! AGTCTGGGGTGAACAAGTCT+CGG + chr4_1:63512388-63512407 Msa0563210:CDS 50.0%
! TTTTCCTCTCCTGCAGAGGA+GGG - chr4_1:63512416-63512435 None:intergenic 50.0%
! TTCCTTTTCCTCTCCTGCAG+AGG - chr4_1:63512420-63512439 None:intergenic 50.0%
GTCATCCTGATCCCACACAA+TGG - chr4_1:63512451-63512470 None:intergenic 50.0%
TGTGTGGGATCAGGATGACA+AGG + chr4_1:63512452-63512471 Msa0563210:CDS 50.0%
TGAAGGGGTCATCGAAGGTT+AGG + chr4_1:63512478-63512497 Msa0563210:CDS 50.0%
GAAGGGGTCATCGAAGGTTA+GGG + chr4_1:63512479-63512498 Msa0563210:CDS 50.0%
!! ACAGACGATTTTGGCAGCTG+AGG - chr4_1:63512540-63512559 None:intergenic 50.0%
AAGTGCGTTCTGTCAGGAAC+AGG + chr4_1:63512592-63512611 Msa0563210:CDS 50.0%
AGTGCGTTCTGTCAGGAACA+GGG + chr4_1:63512593-63512612 Msa0563210:CDS 50.0%
CTGTCAGGAACAGGGAAACT+AGG + chr4_1:63512601-63512620 Msa0563210:CDS 50.0%
GTTAAGGAAGGGGAAGGAGA+AGG - chr4_1:63512663-63512682 None:intergenic 50.0%
GACTGAGTTAAGGAAGGGGA+AGG - chr4_1:63512669-63512688 None:intergenic 50.0%
CGGTGACAAGGACTGAGTTA+AGG - chr4_1:63512679-63512698 None:intergenic 50.0%
CCATGTCTGTTTCGGTGACA+AGG - chr4_1:63512691-63512710 None:intergenic 50.0%
CCTTGTCACCGAAACAGACA+TGG + chr4_1:63512688-63512707 Msa0563210:CDS 50.0%
TCTTCTTCAAGATGGGCAGC+TGG + chr4_1:63512771-63512790 Msa0563210:CDS 50.0%
GAAGAGGAGACTAACTCCTG+AGG + chr4_1:63512851-63512870 Msa0563210:CDS 50.0%
AACCATGGGAGAACGTCTAG+TGG + chr4_1:63512981-63513000 Msa0563210:CDS 50.0%
!! GTTCTTTGAGGTTGAGCTGG+AGG - chr4_1:63513140-63513159 None:intergenic 50.0%
!! ACCGTTCTTTGAGGTTGAGC+TGG - chr4_1:63513143-63513162 None:intergenic 50.0%
GGGCCAAAGATAAGAAGACC+GGG + chr4_1:63513246-63513265 Msa0563210:CDS 50.0%
GGCCAAAGATAAGAAGACCG+GGG + chr4_1:63513247-63513266 Msa0563210:CDS 50.0%
!! CTTCCCGCTGACTTCTCTTA+GGG + chr4_1:63513316-63513335 Msa0563210:CDS 50.0%
CTCACCTGGTGGTTACTCTT+TGG + chr4_1:63513670-63513689 Msa0563210:CDS 50.0%
! AGGGCACCTGAACTTCTTCT+GGG + chr4_1:63514164-63514183 Msa0563210:intron 50.0%
TTTGCCCCCAGAAGAAGTTC+AGG - chr4_1:63514173-63514192 None:intergenic 50.0%
TTGGAAGCCTGGGAAAACAG+TGG - chr4_1:63514601-63514620 None:intergenic 50.0%
!!! GTGGTTTTGGTCTGACTAGC+TGG + chr4_1:63514627-63514646 Msa0563210:intron 50.0%
ACAGTACAAGTCACCAAGGG+AGG - chr4_1:63514653-63514672 None:intergenic 50.0%
GATCCAGTGAATGATGTGGC+AGG - chr4_1:63514748-63514767 None:intergenic 50.0%
! CTGTGCTTTTCTATCCCCCT+AGG - chr4_1:63515085-63515104 None:intergenic 50.0%
! GGGATAGAAAAGCACAGCTG+TGG + chr4_1:63515088-63515107 Msa0563210:intron 50.0%
CAAGAGTCCAGACCCTTTAG+AGG + chr4_1:63515202-63515221 Msa0563210:CDS 50.0%
GAGTTGCAGCAGGGTGAATT+GGG + chr4_1:63515239-63515258 Msa0563210:CDS 50.0%
AGTTGCAGCAGGGTGAATTG+GGG + chr4_1:63515240-63515259 Msa0563210:CDS 50.0%
! CCTTGAGCAGCAAAGTGTCA+CGG - chr4_1:63515529-63515548 None:intergenic 50.0%
ACACTTTGCTGCTCAAGGTG+TGG + chr4_1:63515531-63515550 Msa0563210:three_prime_UTR 50.0%
! AAGAGACGGTTGGTGTGAAG+TGG + chr4_1:63515740-63515759 Msa0563210:three_prime_UTR 50.0%
! GGTTGGTGTGAAGTGGAAGA+GGG + chr4_1:63515747-63515766 Msa0563210:three_prime_UTR 50.0%
GTGCTCTTGCGAGAGTTGTA+AGG + chr4_1:63516316-63516335 Msa0563210:intron 50.0%
CTGATCATGTTGAGGCCAAG+TGG + chr4_1:63516375-63516394 Msa0563210:intron 50.0%
! TCAAAGCAAGCAGGTTGAGG+AGG + chr4_1:63516706-63516725 Msa0563210:three_prime_UTR 50.0%
ACAATGTTGCAGCCTTGCTC+TGG - chr4_1:63516979-63516998 None:intergenic 50.0%
CTGAGTTCAAACCCGGACAA+AGG - chr4_1:63517045-63517064 None:intergenic 50.0%
CTTTGTCCGGGTTTGAACTC+AGG + chr4_1:63517043-63517062 Msa0563210:intron 50.0%
GTTAAGGGGTAAGGAGTTGG+AGG - chr4_1:63517070-63517089 None:intergenic 50.0%
GTAGCAAGCGTGCAAAAGTC+AGG - chr4_1:63517287-63517306 None:intergenic 50.0%
CAGCCTAGTTGTCGCAAGTT+TGG + chr4_1:63517787-63517806 Msa0563210:three_prime_UTR 50.0%
ACCTTTCACGCGGTAGCATT+AGG + chr4_1:63517950-63517969 Msa0563210:intron 50.0%
GGTATCACCTACACAATCGG+AGG + chr4_1:63518274-63518293 Msa0563210:three_prime_UTR 50.0%
GGGGCAGAGATTCCAGAGAT+AGG + chr4_1:63512166-63512185 Msa0563210:CDS 55.0%
GGGTGAGGCAGAAGGATGTT+AGG + chr4_1:63512193-63512212 Msa0563210:CDS 55.0%
TCTTCCAGCCGGAGTGATTC+CGG + chr4_1:63512255-63512274 Msa0563210:CDS 55.0%
CACTGCTACCGGAATCACTC+CGG - chr4_1:63512266-63512285 None:intergenic 55.0%
CTCTCACTGGAAAGCTCACC+AGG - chr4_1:63512342-63512361 None:intergenic 55.0%
GGTGAGCTTTCCAGTGAGAG+TGG + chr4_1:63512342-63512361 Msa0563210:CDS 55.0%
TCCAGTGAGAGTGGGTCTGA+TGG + chr4_1:63512351-63512370 Msa0563210:CDS 55.0%
ACCATCAGACCCACTCTCAC+TGG - chr4_1:63512355-63512374 None:intergenic 55.0%
TTTCCTCTCCTGCAGAGGAG+GGG - chr4_1:63512415-63512434 None:intergenic 55.0%
! CTTTTCCTCTCCTGCAGAGG+AGG - chr4_1:63512417-63512436 None:intergenic 55.0%
CTCCTCTGCAGGAGAGGAAA+AGG + chr4_1:63512415-63512434 Msa0563210:CDS 55.0%
TTCGCCCATTGTGTGGGATC+AGG + chr4_1:63512443-63512462 Msa0563210:CDS 55.0%
GGAAGTGAAGGGGTCATCGA+AGG + chr4_1:63512473-63512492 Msa0563210:CDS 55.0%
GGTTAGGGTCTCCACAACAC+CGG + chr4_1:63512494-63512513 Msa0563210:CDS 55.0%
!! GATTTTGGCAGCTGAGGCAG+AGG - chr4_1:63512534-63512553 None:intergenic 55.0%
TCTAGTGGCGATGGACATCC+TGG + chr4_1:63512996-63513015 Msa0563210:CDS 55.0%
TGAGGTTGAGCTGGAGGTTC+AGG - chr4_1:63513134-63513153 None:intergenic 55.0%
!! GCTTCCCGCTGACTTCTCTT+AGG + chr4_1:63513315-63513334 Msa0563210:CDS 55.0%
! CAGGGCACCTGAACTTCTTC+TGG + chr4_1:63514163-63514182 Msa0563210:intron 55.0%
GGGCACCTGAACTTCTTCTG+GGG + chr4_1:63514165-63514184 Msa0563210:intron 55.0%
GGCACCTGAACTTCTTCTGG+GGG + chr4_1:63514166-63514185 Msa0563210:CDS 55.0%
CCACCCAAAGTTGGAAGCCT+GGG - chr4_1:63514611-63514630 None:intergenic 55.0%
ACCACCCAAAGTTGGAAGCC+TGG - chr4_1:63514612-63514631 None:intergenic 55.0%
CTGTCCTGAGCATGTTGAGC+AGG - chr4_1:63514999-63515018 None:intergenic 55.0%
CTGCTCAACATGCTCAGGAC+AGG + chr4_1:63514997-63515016 Msa0563210:CDS 55.0%
! ACCCTTTAGAGGAGCAGCGA+CGG + chr4_1:63515213-63515232 Msa0563210:CDS 55.0%
TCCGTCGCTGCTCCTCTAAA+GGG - chr4_1:63515217-63515236 None:intergenic 55.0%
TTCCGTCGCTGCTCCTCTAA+AGG - chr4_1:63515218-63515237 None:intergenic 55.0%
TTTAGAGGAGCAGCGACGGA+AGG + chr4_1:63515217-63515236 Msa0563210:CDS 55.0%
GGAGTTGCAGCAGGGTGAAT+TGG + chr4_1:63515238-63515257 Msa0563210:CDS 55.0%
CCGTGACACTTTGCTGCTCA+AGG + chr4_1:63515526-63515545 Msa0563210:three_prime_UTR 55.0%
! CGGTTGGTGTGAAGTGGAAG+AGG + chr4_1:63515746-63515765 Msa0563210:three_prime_UTR 55.0%
GGGCCTTCTGTGCATTTCGT+TGG + chr4_1:63515767-63515786 Msa0563210:three_prime_UTR 55.0%
GGAGGTCCTGAGTTCAAACC+CGG - chr4_1:63517052-63517071 None:intergenic 55.0%
GCCTAATGCTACCGCGTGAA+AGG - chr4_1:63517954-63517973 None:intergenic 55.0%
GTTGCATGCGATCACGTCGA+AGG + chr4_1:63518091-63518110 Msa0563210:intron 55.0%
!! AGGAGTGCCTCCGATTGTGT+AGG - chr4_1:63518284-63518303 None:intergenic 55.0%
CCACTCCCCCCATTCCTAAC+CGG - chr4_1:63512147-63512166 None:intergenic 60.0%
CGGTTAGGAATGGGGGGAGT+GGG + chr4_1:63512145-63512164 Msa0563210:CDS 60.0%
GGTTAGGAATGGGGGGAGTG+GGG + chr4_1:63512146-63512165 Msa0563210:CDS 60.0%
GTTAGGAATGGGGGGAGTGG+GGG + chr4_1:63512147-63512166 Msa0563210:CDS 60.0%
CGGAGTGATTCCGGTAGCAG+TGG + chr4_1:63512264-63512283 Msa0563210:CDS 60.0%
ACCAAGGCTGCCACTGCTAC+CGG - chr4_1:63512277-63512296 None:intergenic 60.0%
GCAGAAAAACCACACCGGCG+AGG - chr4_1:63512300-63512319 None:intergenic 60.0%
TAGGGTCTCCACAACACCGG+TGG + chr4_1:63512497-63512516 Msa0563210:CDS 60.0%
! AAGAGCAGCCACCGGTGTTG+TGG - chr4_1:63512508-63512527 None:intergenic 60.0%
AGAGGAGGAAGAGCAGCCAC+CGG - chr4_1:63512516-63512535 None:intergenic 60.0%
TTTGGCAGCTGAGGCAGAGG+AGG - chr4_1:63512531-63512550 None:intergenic 60.0%
CAGGAAGCTGAGCAGCCAGA+AGG + chr4_1:63512720-63512739 Msa0563210:CDS 60.0%
AGCTGAGCAGCCAGAAGGTG+AGG + chr4_1:63512725-63512744 Msa0563210:CDS 60.0%
CGCCACTAGACGTTCTCCCA+TGG - chr4_1:63512986-63513005 None:intergenic 60.0%
GGGAGAACGTCTAGTGGCGA+TGG + chr4_1:63512987-63513006 Msa0563210:CDS 60.0%
CCCAGGCTTCCAACTTTGGG+TGG + chr4_1:63514608-63514627 Msa0563210:intron 60.0%
! TCTGACTAGCTGGCCTCCCT+TGG + chr4_1:63514637-63514656 Msa0563210:intron 60.0%
! CGCTGCTCCTCTAAAGGGTC+TGG - chr4_1:63515212-63515231 None:intergenic 60.0%
CGACGGAAGGAGTTGCAGCA+GGG + chr4_1:63515230-63515249 Msa0563210:CDS 60.0%
CAGCAGGGTGAATTGGGGAC+TGG + chr4_1:63515245-63515264 Msa0563210:CDS 60.0%
CAGGGTGAATTGGGGACTGG+TGG + chr4_1:63515248-63515267 Msa0563210:CDS 60.0%
GGAGGGTTGGGTAGCACAAC+TGG - chr4_1:63517098-63517117 None:intergenic 60.0%
ACGCGGTAGCATTAGGCAGC+AGG + chr4_1:63517957-63517976 Msa0563210:intron 60.0%
CCGGTTAGGAATGGGGGGAG+TGG + chr4_1:63512144-63512163 Msa0563210:CDS 65.0%
GCTACCGGAATCACTCCGGC+TGG - chr4_1:63512262-63512281 None:intergenic 65.0%
TCCGGTAGCAGTGGCAGCCT+TGG + chr4_1:63512273-63512292 Msa0563210:CDS 65.0%
AACCACACCGGCGAGGACCA+AGG - chr4_1:63512293-63512312 None:intergenic 65.0%
GCGACGGAAGGAGTTGCAGC+AGG + chr4_1:63515229-63515248 Msa0563210:CDS 65.0%
GTGGCAGCCTTGGTCCTCGC+CGG + chr4_1:63512283-63512302 Msa0563210:CDS 70.0%
AGCCTTGGTCCTCGCCGGTG+TGG + chr4_1:63512288-63512307 Msa0563210:CDS 70.0%
GTCTCGGTCCCCTCCTCTGC+AGG + chr4_1:63512404-63512423 Msa0563210:CDS 70.0%
GGTCCCCTCCTCTGCAGGAG+AGG + chr4_1:63512409-63512428 Msa0563210:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 63512039 63518444 63512039 ID=Msa0563210;Name=Msa0563210
chr4_1 mRNA 63512039 63518444 63512039 ID=Msa0563210-mRNA-1;Parent=Msa0563210;Name=Msa0563210-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.9|0.81|1|0.6|0.54|11|1256|709
chr4_1 exon 63512039 63513531 63512039 ID=Msa0563210-mRNA-1:exon:20177;Parent=Msa0563210-mRNA-1
chr4_1 exon 63513605 63513697 63513605 ID=Msa0563210-mRNA-1:exon:20178;Parent=Msa0563210-mRNA-1
chr4_1 exon 63514166 63514301 63514166 ID=Msa0563210-mRNA-1:exon:20179;Parent=Msa0563210-mRNA-1
chr4_1 exon 63514443 63514531 63514443 ID=Msa0563210-mRNA-1:exon:20180;Parent=Msa0563210-mRNA-1
chr4_1 exon 63514720 63514831 63514720 ID=Msa0563210-mRNA-1:exon:20181;Parent=Msa0563210-mRNA-1
chr4_1 exon 63514912 63515018 63514912 ID=Msa0563210-mRNA-1:exon:20182;Parent=Msa0563210-mRNA-1
chr4_1 exon 63515184 63515822 63515184 ID=Msa0563210-mRNA-1:exon:20183;Parent=Msa0563210-mRNA-1
chr4_1 exon 63516704 63516786 63516704 ID=Msa0563210-mRNA-1:exon:20184;Parent=Msa0563210-mRNA-1
chr4_1 exon 63517203 63517504 63517203 ID=Msa0563210-mRNA-1:exon:20185;Parent=Msa0563210-mRNA-1
chr4_1 exon 63517778 63517925 63517778 ID=Msa0563210-mRNA-1:exon:20186;Parent=Msa0563210-mRNA-1
chr4_1 exon 63518261 63518444 63518261 ID=Msa0563210-mRNA-1:exon:20187;Parent=Msa0563210-mRNA-1
chr4_1 CDS 63512039 63513531 63512039 ID=Msa0563210-mRNA-1:cds;Parent=Msa0563210-mRNA-1
chr4_1 CDS 63513605 63513697 63513605 ID=Msa0563210-mRNA-1:cds;Parent=Msa0563210-mRNA-1
chr4_1 CDS 63514166 63514301 63514166 ID=Msa0563210-mRNA-1:cds;Parent=Msa0563210-mRNA-1
chr4_1 CDS 63514443 63514531 63514443 ID=Msa0563210-mRNA-1:cds;Parent=Msa0563210-mRNA-1
chr4_1 CDS 63514720 63514831 63514720 ID=Msa0563210-mRNA-1:cds;Parent=Msa0563210-mRNA-1
chr4_1 CDS 63514912 63515018 63514912 ID=Msa0563210-mRNA-1:cds;Parent=Msa0563210-mRNA-1
chr4_1 CDS 63515184 63515283 63515184 ID=Msa0563210-mRNA-1:cds;Parent=Msa0563210-mRNA-1
chr4_1 three_prime_UTR 63515284 63515822 63515284 ID=Msa0563210-mRNA-1:three_prime_utr;Parent=Msa0563210-mRNA-1
chr4_1 three_prime_UTR 63516704 63516786 63516704 ID=Msa0563210-mRNA-1:three_prime_utr;Parent=Msa0563210-mRNA-1
chr4_1 three_prime_UTR 63517203 63517504 63517203 ID=Msa0563210-mRNA-1:three_prime_utr;Parent=Msa0563210-mRNA-1
chr4_1 three_prime_UTR 63517778 63517925 63517778 ID=Msa0563210-mRNA-1:three_prime_utr;Parent=Msa0563210-mRNA-1
chr4_1 three_prime_UTR 63518261 63518444 63518261 ID=Msa0563210-mRNA-1:three_prime_utr;Parent=Msa0563210-mRNA-1
Gene Sequence

>Msa0563210

ATGGCTGCTGGTAGACATGGCAGTTACCACGAAAACGAGTTTAAGGATCACGAGTCCAATTTGGAAGTTTCAAGGCGGGGTTTTTCAAATTCGAAAGAGTATGATCCGGTTAGGAATGGGGGGAGTGGGGGCAGAGATTCCAGAGATAGGATTAGGGTGAGGCAGAAGGATGTTAGGGAGAAAGAAGTTGCTGTTATCAATGGTAATTATCGGTCATCTTCCAGCCGGAGTGATTCCGGTAGCAGTGGCAGCCTTGGTCCTCGCCGGTGTGGTTTTTCTGCGAAGTCAACCGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGGTCTGATGGTGCTATTGAATCTGAGTCTGGGGTGAACAAGTCTCGGTCCCCTCCTCTGCAGGAGAGGAAAAGGAAATTTTCGCCCATTGTGTGGGATCAGGATGACAAGGAAGTGAAGGGGTCATCGAAGGTTAGGGTCTCCACAACACCGGTGGCTGCTCTTCCTCCTCTGCCTCAGCTGCCAAAATCGTCTGTTCTGTCGCTGAACACTTCTTATGATGAAGTTCAAGTGCGTTCTGTCAGGAACAGGGAAACTAGGGATGTTGAGTTTCCCACAGCATCTAAGGTTACTGTTCCTTCTCCTTCCCCTTCCTTAACTCAGTCCTTGTCACCGAAACAGACATGGGGTAATGATCAGGAAGCTGAGCAGCCAGAAGGTGAGGATTATGTTCCAACTCGAAATATATCTTCTTCAAGATGGGCAGCTGGAGATAACTCTCCTGTTGATGAGGGTGAGATTCTCAATGATGAGGAAATGCCTAAAAGGAAGAGGAGACTAACTCCTGAGGTTTTGGAGACTAGAGTGAGGAACAAGTTATTGAGCCCCAATGATTCTAAAATAGGTGGTTTTGAAGGTGCTCGAGCCAGATCATCTGATTCGGAAGAAAGAAGTGTTAACCATGGGAGAACGTCTAGTGGCGATGGACATCCTGGTATTGAATCAGAAAAGGATGACTATATGGACATTGATGTTCGAGGTACAAAAAGTGACACCAGTAGTCACTCAGATACAGAATCTGAAGATGACATTGATAGGCAAGAGACTCCTGAACCTCCAGCTCAACCTCAAAGAACGGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATACGGTGTTGTATATAGGGCCAAAGATAAGAAGACCGGGGAAGTTGTAGCATTAAAGAAGGTCAAGATGGAGAAGGAAAAAGAAGGCTTCCCGCTGACTTCTCTTAGGGAAATAAACATTCTTCTCTCCTTTCACCACCCATACATAGTTGATGTCAAGGAAGTAGTGGTTGGAAGTAGCCTTGACAGTATTTTCATGGTTATGGAATACATGGAACATGATCTTAAAGGATTAATGGAGTCAATGAAGCAACCATTTAGCCAAAGTGAAGTGAAAGTGCTTAATGATCCAGCTTTTAGAAGGGGTGAGCTAAAAATTTGTGATTTTGGTTTGGCTCGTCAATATGGGAGTCCTTTGAAACCATATACTCACCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTACTCAACAGCTATTGATATGTGGTCTCTTGGTTGTATAATGGCTGAGCTATTGTCTAAGGAACCGTTGTTCAATGGAAAAACGGAATTCGATCAACTTGACAAGATTTTCAGGATACTTGGCACTCCAAATGAAACAATATGGCCAGGCTTCTCAAAATTACCTGGAGTCAAGGTCAATTTTGTCAAGCACCAGTATAATCTTCTGCGTAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTCCTAACTTATGACCCTGAAAAGCGGATCACGGCTGAAGCCGCTCTGAATCATGAATGGTTCCGTGAAGTTCCTCTTCCCAAGAGCAAAGAATTCATGCCTACATTTCCTGCTCAACATGCTCAGGACAGGCGGATGCGGAGAGTGTACAAGAGTCCAGACCCTTTAGAGGAGCAGCGACGGAAGGAGTTGCAGCAGGGTGAATTGGGGACTGGTGGAATTTTTGGTTAA
Protein sequence

>Msa0563210

MAAGRHGSYHENEFKDHESNLEVSRRGFSNSKEYDPVRNGGSGGRDSRDRIRVRQKDVREKEVAVINGNYRSSSSRSDSGSSGSLGPRRCGFSAKSTDREPGELSSESGSDGAIESESGVNKSRSPPLQERKRKFSPIVWDQDDKEVKGSSKVRVSTTPVAALPPLPQLPKSSVLSLNTSYDEVQVRSVRNRETRDVEFPTASKVTVPSPSPSLTQSLSPKQTWGNDQEAEQPEGEDYVPTRNISSSRWAAGDNSPVDEGEILNDEEMPKRKRRLTPEVLETRVRNKLLSPNDSKIGGFEGARARSSDSEERSVNHGRTSSGDGHPGIESEKDDYMDIDVRGTKSDTSSHSDTESEDDIDRQETPEPPAQPQRTVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEVVALKKVKMEKEKEGFPLTSLREINILLSFHHPYIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMESMKQPFSQSEVKVLNDPAFRRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRRVYKSPDPLEEQRRKELQQGELGTGGIFG*