AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0563680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0563680 MtrunA17_Chr8g0377501 91.826 991 26 3 1 966 8 968 0.0 1843
Msa0563680 MtrunA17_Chr3g0122351 57.357 999 333 17 1 963 1 942 0.0 1027
Msa0563680 MtrunA17_Chr2g0279141 39.837 615 273 21 418 962 439 1026 7.84e-119 388
Msa0563680 MtrunA17_Chr2g0279141 49.180 183 81 4 4 179 10 187 3.86e-45 176
Msa0563680 MtrunA17_Chr8g0382191 39.568 556 276 10 424 932 496 1038 4.59e-114 376
Msa0563680 MtrunA17_Chr8g0382191 45.918 196 87 4 6 188 8 197 3.51e-46 180
Msa0563680 MtrunA17_Chr4g0050401 37.767 609 307 19 418 965 426 1023 9.36e-109 361
Msa0563680 MtrunA17_Chr4g0050401 50.641 156 70 1 8 156 14 169 1.33e-42 168
Msa0563680 MtrunA17_Chr2g0294711 36.525 564 281 16 428 939 356 894 4.02e-80 280
Msa0563680 MtrunA17_Chr2g0294711 51.034 145 69 1 6 150 24 166 3.57e-40 160
Msa0563680 MtrunA17_Chr4g0068161 34.687 591 307 20 409 941 338 907 9.44e-80 278
Msa0563680 MtrunA17_Chr4g0068161 48.276 145 73 1 6 150 24 166 1.74e-33 139
Msa0563680 MtrunA17_Chr8g0382181 28.049 492 254 17 49 495 8 444 1.43e-36 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0563680 AT1G67310.1 56.788 604 227 7 374 945 389 990 0.0 618
Msa0563680 AT1G67310.1 52.720 239 89 5 5 240 34 251 4.39e-68 247
Msa0563680 AT5G09410.4 39.546 617 280 22 419 962 276 872 2.03e-113 370
Msa0563680 AT5G09410.1 39.546 617 280 22 419 962 379 975 4.94e-112 369
Msa0563680 AT5G09410.1 54.745 137 62 0 1 137 10 146 2.17e-45 177
Msa0563680 AT5G09410.2 39.546 617 280 22 419 962 397 993 5.30e-112 369
Msa0563680 AT5G09410.2 54.745 137 62 0 1 137 10 146 2.25e-45 177
Msa0563680 AT5G09410.3 39.546 617 280 22 419 962 456 1052 3.39e-111 369
Msa0563680 AT5G09410.3 44.910 167 62 1 1 137 69 235 1.92e-40 162
Msa0563680 AT5G64220.1 38.356 584 279 17 419 940 446 1010 6.50e-110 365
Msa0563680 AT5G64220.1 49.711 173 74 1 8 180 14 173 5.75e-48 186
Msa0563680 AT5G64220.2 38.356 584 279 17 419 940 446 1010 6.50e-110 365
Msa0563680 AT5G64220.2 49.711 173 74 1 8 180 14 173 5.75e-48 186
Msa0563680 AT2G22300.3 39.643 560 255 13 422 932 396 921 1.28e-108 360
Msa0563680 AT2G22300.3 38.919 185 106 3 53 235 1 180 4.81e-31 132
Msa0563680 AT2G22300.2 39.643 560 255 13 422 932 454 979 7.90e-108 358
Msa0563680 AT2G22300.2 40.343 233 132 3 5 235 11 238 5.77e-48 186
Msa0563680 AT2G22300.1 39.643 560 255 13 422 932 454 979 7.90e-108 358
Msa0563680 AT2G22300.1 40.343 233 132 3 5 235 11 238 5.77e-48 186
Msa0563680 AT3G16940.3 32.977 561 306 17 428 941 274 811 1.38e-72 257
Msa0563680 AT3G16940.3 48.993 149 75 1 12 160 1 148 8.19e-38 153
Msa0563680 AT3G16940.1 32.977 561 306 17 428 941 301 838 1.48e-72 257
Msa0563680 AT3G16940.1 47.742 155 80 1 6 160 22 175 8.72e-39 156
Msa0563680 AT3G16940.2 31.590 459 252 13 428 844 301 739 3.10e-50 190
Msa0563680 AT3G16940.2 53.030 132 62 0 6 137 22 153 3.88e-39 156

Find 244 sgRNAs with CRISPR-Local

Find 549 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTGCATAGTAACAATTTA+TGG 0.140587 4_1:+64118200 None:intergenic
AGAAACCTCAGCTGACTTTA+AGG 0.172864 4_1:-64117216 Msa0563680:CDS
GTTCACCATCTTCTTCATTA+AGG 0.204228 4_1:-64115356 Msa0563680:CDS
ATTATAGAGGCTCTACTATT+TGG 0.207358 4_1:-64113992 Msa0563680:CDS
GGAAGCATTACAAAGTATTA+TGG 0.222235 4_1:-64112517 Msa0563680:CDS
TCTATTGCATTATCAGTTTC+CGG 0.225698 4_1:-64111865 Msa0563680:three_prime_UTR
AATAATCCCCTGCTCTTTCT+TGG 0.231755 4_1:+64113850 None:intergenic
AAAACAGAAATTTACTATTA+AGG 0.252298 4_1:-64115019 Msa0563680:CDS
CTTCATTGGGCTGCACGTTT+TGG 0.253483 4_1:-64113731 Msa0563680:CDS
GGGATTATTCACATGGTTGC+TGG 0.262638 4_1:-64113836 Msa0563680:CDS
CTGTTATTACTTGTTAGATT+TGG 0.278401 4_1:-64114109 Msa0563680:CDS
CTTTGTAATGCTTCCTAACT+TGG 0.282011 4_1:+64112525 None:intergenic
CCCTTGATGATTCTGTGGTT+TGG 0.285385 4_1:+64117091 None:intergenic
ACTTCCTCCATATTCTTCTA+TGG 0.286754 4_1:-64115142 Msa0563680:CDS
GGAGAAAAGGAGTCGGTTTA+CGG 0.298490 4_1:-64112457 Msa0563680:CDS
ATGGGTGGACTGCCCTTCAT+TGG 0.305451 4_1:-64113745 Msa0563680:CDS
TCAGAGGAATAACCCCATTC+TGG 0.307135 4_1:+64114988 None:intergenic
AATCTTTGTAAAGTATAAAA+TGG 0.314092 4_1:-64111719 Msa0563680:three_prime_UTR
CATCATGAGATGCTCCAATT+TGG 0.318825 4_1:+64115067 None:intergenic
TTGTTTGACCAAAGCCAAAT+TGG 0.322075 4_1:-64115081 Msa0563680:CDS
CTTTCCAGAGGCGGAGCTAT+TGG 0.324977 4_1:-64118161 Msa0563680:CDS
AGTTCCTGTTGAGCTAATTC+AGG 0.325656 4_1:-64114307 Msa0563680:CDS
TTTGGCAGTGAAAATTCTTC+TGG 0.330125 4_1:-64113974 Msa0563680:CDS
GTCATCCCTCTGATTCTGCC+TGG 0.330295 4_1:-64114353 Msa0563680:CDS
ATTCACATGGTTGCTGGGTT+GGG 0.335295 4_1:-64113830 Msa0563680:CDS
TTCACTTGTTTGTGCAAGTT+CGG 0.338414 4_1:+64111986 None:intergenic
TGTTACTTGTTGGCTGTTGC+GGG 0.338603 4_1:+64119465 None:intergenic
ATTATGGGCAGTTGGAATCT+TGG 0.340243 4_1:-64112501 Msa0563680:CDS
TGTTATTACTTGTTAGATTT+GGG 0.340702 4_1:-64114108 Msa0563680:CDS
GTTTCATCCATAGAAGAATA+TGG 0.341126 4_1:+64115135 None:intergenic
TTCACCATCTTCTTCATTAA+GGG 0.346632 4_1:-64115355 Msa0563680:CDS
TAAAATAGCCCCTGGTTATC+TGG 0.347146 4_1:+64117029 None:intergenic
AGCTTCATGCTCGTTGTAGA+AGG 0.349283 4_1:+64117124 None:intergenic
GTGAAACAGTAGAATTGATT+TGG 0.352194 4_1:+64120178 None:intergenic
AGAAGAAGAGTAATTGAATC+TGG 0.352299 4_1:+64120111 None:intergenic
ATAGTAGAGCCTCTATAATA+TGG 0.356170 4_1:+64113996 None:intergenic
TTCATCTACCTCCCGAGATC+TGG 0.363660 4_1:+64113892 None:intergenic
GAAGTTCCATCTCACATTCC+TGG 0.365550 4_1:-64114267 Msa0563680:CDS
AAAGTAGATTGTATGTATAT+TGG 0.372896 4_1:-64111772 Msa0563680:three_prime_UTR
ATTCTTCTGGTACTATCAAT+TGG 0.373127 4_1:-64113961 Msa0563680:CDS
TGCAGCTAGCAGCGGGCATA+AGG 0.374436 4_1:-64113339 Msa0563680:CDS
TAACAGCTCATCTGGAGTTC+TGG 0.376239 4_1:+64114126 None:intergenic
TATTCACATGGTTGCTGGGT+TGG 0.377002 4_1:-64113831 Msa0563680:CDS
CCAATTGGATCTTGTGCACT+TGG 0.378723 4_1:+64113380 None:intergenic
ATGTGAGAGGTTACCAAGTT+AGG 0.379390 4_1:-64112538 Msa0563680:CDS
GAGAAAAGGAGTCGGTTTAC+GGG 0.381739 4_1:-64112456 Msa0563680:CDS
GTTGCATCACTTATAGCTTC+TGG 0.385172 4_1:-64113428 Msa0563680:CDS
AGTCATTCCATTGTTATAAG+AGG 0.386448 4_1:+64117265 None:intergenic
CCATCCTGAATTAGCTCAAC+AGG 0.389513 4_1:+64114303 None:intergenic
GCTTCTCTTTCCAATGGAGC+AGG 0.391039 4_1:+64114151 None:intergenic
CATTTCCATCAGGGAAATCA+TGG 0.392414 4_1:+64115549 None:intergenic
GAAGCATTACAAAGTATTAT+GGG 0.396758 4_1:-64112516 Msa0563680:CDS
ATAGCTTCTGGTGCATCTGC+TGG 0.404064 4_1:-64113416 Msa0563680:CDS
TCACACCACAACTGAGAATA+GGG 0.407691 4_1:+64113789 None:intergenic
ATGCACAGAGTAACCTTTCC+AGG 0.407884 4_1:+64114249 None:intergenic
CATCCATTGCAGCTAGCAGC+GGG 0.408752 4_1:-64113346 Msa0563680:CDS
ACAAGTAATAACAGCTCATC+TGG 0.410138 4_1:+64114118 None:intergenic
TTGTAGGGAAGGCTCAGTTC+TGG 0.411053 4_1:-64117434 Msa0563680:intron
GAGATGCTCCAATTTGGCTT+TGG 0.415155 4_1:+64115073 None:intergenic
GAGGAATCCGCAGCTCTCTC+TGG 0.419356 4_1:-64117053 Msa0563680:CDS
TCAAGCTTTGCGCCGATTGG+AGG 0.420689 4_1:-64117189 Msa0563680:CDS
CTGGTGGCTTCTCTTTCCAA+TGG 0.422838 4_1:+64114145 None:intergenic
AGCAGGGTCGGTGAAATTCT+TGG 0.425679 4_1:+64114168 None:intergenic
TACTCAAGCTTTGCGCCGAT+TGG 0.428909 4_1:-64117192 Msa0563680:CDS
CGAACCCGGAAAACTATTGC+TGG 0.430215 4_1:-64115323 Msa0563680:CDS
TCTGCCTGGGCCTGTATGCT+TGG 0.432274 4_1:-64114339 Msa0563680:CDS
TAAGGCTAGCGTTGCTCCCC+AGG 0.434493 4_1:+64111899 None:intergenic
TCATATAGTACTCAGAATCC+AGG 0.436097 4_1:-64117359 Msa0563680:CDS
TGGGTGGACTGCCCTTCATT+GGG 0.436536 4_1:-64113744 Msa0563680:CDS
GGATTATTCACATGGTTGCT+GGG 0.437285 4_1:-64113835 Msa0563680:CDS
TTTCACCGACCCTGCTCCAT+TGG 0.437455 4_1:-64114161 Msa0563680:CDS
TAAGGCAGTCTCCCCAGAAT+GGG 0.443176 4_1:-64115001 Msa0563680:CDS
CGTGGCTTACTTCCAGATCT+CGG 0.443228 4_1:-64113904 Msa0563680:CDS
GAAGCTCTGATTAGGTTCAT+AGG 0.447215 4_1:+64117313 None:intergenic
AGCGGGCATAAGGGACTGGC+AGG 0.447828 4_1:-64113329 Msa0563680:CDS
TGATATTGCTCACGAGCATC+AGG 0.448217 4_1:+64112308 None:intergenic
CCATCTGTCATCTCTTACAC+TGG 0.451970 4_1:-64113279 Msa0563680:CDS
CAGAGGAATAACCCCATTCT+GGG 0.453671 4_1:+64114989 None:intergenic
CAAAACGTGCAGCCCAATGA+AGG 0.453699 4_1:+64113732 None:intergenic
ATGTTACTTGTTGGCTGTTG+CGG 0.454201 4_1:+64119464 None:intergenic
CCCGGTGACAATTGTGTGCC+AGG 0.454642 4_1:+64117410 None:intergenic
AAGTAATGATAACAACGAAT+CGG 0.457105 4_1:-64114059 Msa0563680:CDS
GATCACATTCATTTAGAAAA+CGG 0.457488 4_1:-64113088 Msa0563680:CDS
ATAAATTTCCGTGATGTCAA+TGG 0.460639 4_1:-64113764 Msa0563680:CDS
AGAAGGCCGATGATGATTCA+TGG 0.465023 4_1:-64114021 Msa0563680:CDS
TTCACACCACAACTGAGAAT+AGG 0.466819 4_1:+64113788 None:intergenic
AAAAGAGATGGAAGAGCTGT+AGG 0.467414 4_1:-64118818 Msa0563680:CDS
AGTAGATGTGGAAATTGAAA+AGG 0.467562 4_1:-64112363 Msa0563680:CDS
GGACTGGAGAAGCTCTGATT+AGG 0.467985 4_1:+64117305 None:intergenic
TCATCCCTCTGATTCTGCCT+GGG 0.473426 4_1:-64114352 Msa0563680:CDS
TTACGTTTCTTCCGAAAAGA+TGG 0.474223 4_1:-64118857 Msa0563680:CDS
TAGCTCCGCCTCTGGAAAGT+AGG 0.474330 4_1:+64118165 None:intergenic
GTGCTAAGATGGCGGAGAAA+AGG 0.474475 4_1:-64112470 Msa0563680:CDS
TTTCCCTGATGGAAATGAAA+AGG 0.477272 4_1:-64115543 Msa0563680:CDS
TATATTCTTGTAGGTGATAG+TGG 0.478429 4_1:-64115596 Msa0563680:intron
TTCTTTGTCCAAGAAAGAGC+AGG 0.480183 4_1:-64113858 Msa0563680:CDS
TAAACAACGGACGTTGACCC+TGG 0.483608 4_1:+64117341 None:intergenic
TCTTCTTCTACCATGACATC+TGG 0.484799 4_1:-64120097 Msa0563680:intron
AATCAGAGCTTCTCCAGTCC+TGG 0.487676 4_1:-64117302 Msa0563680:CDS
GCTTCTTGAAGAGCTACTAA+AGG 0.488943 4_1:-64113939 Msa0563680:CDS
TTCAGAAGAAATATCGAGGT+TGG 0.489389 4_1:-64112929 Msa0563680:CDS
AATGCACCTTCAGCCGTTCG+TGG 0.490374 4_1:+64118789 None:intergenic
CAATAGAGTTGAAATTAGTA+AGG 0.494219 4_1:+64111881 None:intergenic
AGTAATGATAACAACGAATC+GGG 0.494514 4_1:-64114058 Msa0563680:CDS
ACATCCAATAGCTCCGCCTC+TGG 0.497187 4_1:+64118157 None:intergenic
TTCCGGCATCAACATTCTGT+TGG 0.497246 4_1:-64111848 Msa0563680:three_prime_UTR
GAGGTAACTTCTGCAGATCC+AGG 0.497445 4_1:+64117284 None:intergenic
TGGACAAGGTTGTGCTAAGA+TGG 0.498360 4_1:-64112481 Msa0563680:CDS
AGGGATGATGTGCAAGGAAG+AGG 0.501051 4_1:-64117072 Msa0563680:CDS
GCATCCATTGCAGCTAGCAG+CGG 0.501501 4_1:-64113347 Msa0563680:CDS
TAAATTTCCGTGATGTCAAT+GGG 0.503471 4_1:-64113763 Msa0563680:CDS
CTAGACCATGATTTCCCTGA+TGG 0.505531 4_1:-64115554 Msa0563680:CDS
TAGCAGCGGGCATAAGGGAC+TGG 0.507308 4_1:-64113333 Msa0563680:CDS
AATTTCAACACTGATAATGC+TGG 0.508070 4_1:-64115297 Msa0563680:CDS
ATCATCCCTTGATGATTCTG+TGG 0.509626 4_1:+64117086 None:intergenic
AACTTAACTGCACCTCCAAT+CGG 0.509739 4_1:+64117177 None:intergenic
TACAAAGTATTATGGGCAGT+TGG 0.512430 4_1:-64112509 Msa0563680:CDS
GTGGCTTACTTCCAGATCTC+GGG 0.516932 4_1:-64113903 Msa0563680:CDS
TGTATTTCTGACAGCAGCTA+AGG 0.517159 4_1:+64113145 None:intergenic
GAAATGAAAAGGCTTTATCA+TGG 0.519040 4_1:-64115532 Msa0563680:CDS
ATGCCCGCTGCTAGCTGCAA+TGG 0.519565 4_1:+64113343 None:intergenic
ACCTGGCACACAATTGTCAC+CGG 0.520234 4_1:-64117411 Msa0563680:CDS
ACAACTGAGAATAGGGTTCA+AGG 0.521528 4_1:+64113796 None:intergenic
CCAAGTGCACAAGATCCAAT+TGG 0.522680 4_1:-64113380 Msa0563680:CDS
TCCAAACCACAGAATCATCA+AGG 0.522957 4_1:-64117092 Msa0563680:CDS
AAAATGTACATCACTTCTGC+AGG 0.523652 4_1:+64119524 None:intergenic
TTCAACATCACCAAGCATAC+AGG 0.525286 4_1:+64114329 None:intergenic
GGGTTTCAAACCAGAGATGC+AGG 0.526149 4_1:-64112435 Msa0563680:CDS
TCCGAAAAGATGGTCATGCC+TGG 0.526314 4_1:-64118847 Msa0563680:CDS
AAGAAATATCGAGGTTGGAA+AGG 0.529924 4_1:-64112924 Msa0563680:CDS
GCAGCTAGCAGCGGGCATAA+GGG 0.531238 4_1:-64113338 Msa0563680:CDS
ATCACCAAGCATACAGGCCC+AGG 0.535400 4_1:+64114335 None:intergenic
CTTGACATAGCATAAAGCTC+TGG 0.536851 4_1:+64112999 None:intergenic
AGCTCCGCCTCTGGAAAGTA+GGG 0.537194 4_1:+64118166 None:intergenic
TTAAGGCAGTCTCCCCAGAA+TGG 0.537679 4_1:-64115002 Msa0563680:CDS
TAAACAAACACGCGTAGAGA+TGG 0.539052 4_1:+64120202 None:intergenic
AAAGAAAGAGACAAGAGAGT+TGG 0.540143 4_1:+64120236 None:intergenic
TTGAACCCTATTCTCAGTTG+TGG 0.541230 4_1:-64113794 Msa0563680:CDS
GCTACTAAAGGATAAGCTAC+AGG 0.543205 4_1:-64113927 Msa0563680:CDS
TCCATCTCACATTCCTGGAA+AGG 0.544442 4_1:-64114262 Msa0563680:intron
TGAGATAGTGAGAAAACAGC+TGG 0.546276 4_1:+64115183 None:intergenic
ATTGGAGCATCTCATGATGC+TGG 0.547038 4_1:-64115063 Msa0563680:CDS
TCTCTCTGGACCAGATAACC+AGG 0.547626 4_1:-64117039 Msa0563680:CDS
TTCATGGAGCCATATTATAG+AGG 0.548594 4_1:-64114005 Msa0563680:CDS
GCAATACTTACATTTCCTGC+TGG 0.549061 4_1:+64115494 None:intergenic
AACTGTTAGTAATGTCTCCA+AGG 0.549109 4_1:-64113210 Msa0563680:CDS
ATGCACCTTCAGCCGTTCGT+GGG 0.549348 4_1:+64118790 None:intergenic
AACTTCTGCAGATCCAGGAC+TGG 0.551466 4_1:+64117289 None:intergenic
ATCAAGAAGCTCAAAGGAGG+TGG 0.554450 4_1:-64119553 Msa0563680:CDS
GATGGATATAATGGAAGGCA+AGG 0.559300 4_1:-64117005 Msa0563680:intron
TCTTTCCAATGGAGCAGGGT+CGG 0.560531 4_1:+64114156 None:intergenic
GGTGCAGTTAAGTTTGAATG+AGG 0.561643 4_1:-64117168 Msa0563680:CDS
AGAAGCCCACGAACGGCTGA+AGG 0.562890 4_1:-64118795 Msa0563680:intron
GACCAACAGAATGTTGATGC+CGG 0.564290 4_1:+64111846 None:intergenic
ATCTGTATCAAGAAGCTCAA+AGG 0.564701 4_1:-64119559 Msa0563680:CDS
GGTTCCCTTAATGAAGAAGA+TGG 0.565841 4_1:+64115351 None:intergenic
ACCTTTCCAGGAATGTGAGA+TGG 0.568391 4_1:+64114261 None:intergenic
GTTACTTGTTGGCTGTTGCG+GGG 0.569067 4_1:+64119466 None:intergenic
TTACTTGTTGGCTGTTGCGG+GGG 0.569205 4_1:+64119467 None:intergenic
TACAACGAGCATGAAGCTAC+CGG 0.569270 4_1:-64117119 Msa0563680:CDS
TTTATGATGGATATAATGGA+AGG 0.570899 4_1:-64117010 Msa0563680:CDS
GGACATGATTTCGAGTTGAA+CGG 0.571588 4_1:-64111682 None:intergenic
GATATAAGTGCAAGTAGTGT+TGG 0.571594 4_1:-64113029 Msa0563680:CDS
TCGGGAGGTAGATGAAGAGA+CGG 0.571607 4_1:-64113885 Msa0563680:CDS
GGAAGGCTCAGTTCTGGACC+TGG 0.571723 4_1:-64117428 Msa0563680:CDS
ATTCTGTGGTTTGGAATCAC+CGG 0.571949 4_1:+64117100 None:intergenic
GGACTATACGCAGAAGAACC+CGG 0.572116 4_1:+64117392 None:intergenic
AGAAAAGGAGTCGGTTTACG+GGG 0.574601 4_1:-64112455 Msa0563680:CDS
CTTCTCTTTCCAATGGAGCA+GGG 0.575366 4_1:+64114152 None:intergenic
GAAACAAATGCTGTTATGAG+TGG 0.575428 4_1:-64113056 Msa0563680:CDS
ATCCATCATAAAATAGCCCC+TGG 0.576549 4_1:+64117021 None:intergenic
GAAGTTACCTCTTATAACAA+TGG 0.577185 4_1:-64117272 Msa0563680:CDS
ACATGTGTTACCAGATGTCA+TGG 0.577892 4_1:+64120087 None:intergenic
ATGTTCACGTGAGTTTCGAA+AGG 0.582903 4_1:+64112971 None:intergenic
GCCTGGCGGAAGAAAAGAGA+TGG 0.583866 4_1:-64118830 Msa0563680:CDS
TGCTGTCAGAAATACAACTC+AGG 0.587231 4_1:-64113138 Msa0563680:CDS
TGTCTCAAGAGTGCTGTCCA+TGG 0.588545 4_1:-64112339 Msa0563680:CDS
CAGCTCATCTGGAGTTCTGG+TGG 0.594570 4_1:+64114129 None:intergenic
ACAGGCCCAGGCAGAATCAG+AGG 0.594590 4_1:+64114347 None:intergenic
ATATTGCTTTCAGTGAGGAT+CGG 0.596772 4_1:-64113184 Msa0563680:CDS
TTTGTGTAGGCTCATGTGAG+AGG 0.599137 4_1:-64112551 Msa0563680:intron
AAGGCTAGCGTTGCTCCCCA+GGG 0.599236 4_1:+64111900 None:intergenic
AAGGGAACCAGTTACGAACC+CGG 0.599640 4_1:-64115337 Msa0563680:CDS
AAAACGTGCAGCCCAATGAA+GGG 0.600218 4_1:+64113733 None:intergenic
TTCTGAGTACTATATGAGCT+AGG 0.601385 4_1:+64117365 None:intergenic
GCTTCATGCTCGTTGTAGAA+GGG 0.605012 4_1:+64117125 None:intergenic
TCTTTGTCCAAGAAAGAGCA+GGG 0.605633 4_1:-64113857 Msa0563680:CDS
CCTGGCACACAATTGTCACC+GGG 0.606469 4_1:-64117410 Msa0563680:CDS
AAAAGTGTATACATGCCAGC+AGG 0.606884 4_1:-64115509 Msa0563680:CDS
AAAATGGTCTTGAATGCTGT+AGG 0.608167 4_1:-64111703 Msa0563680:three_prime_UTR
CCAGTGTAAGAGATGACAGA+TGG 0.610309 4_1:+64113279 None:intergenic
TTATTCCTCTGAGACTACAA+AGG 0.612910 4_1:-64114977 Msa0563680:intron
CAGTCCACCCATTGACATCA+CGG 0.613503 4_1:+64113756 None:intergenic
CGGGAGGTAGATGAAGAGAC+GGG 0.614610 4_1:-64113884 Msa0563680:CDS
CATGTGAGGTGCATCAGAGG+TGG 0.616605 4_1:+64115209 None:intergenic
CATATAGTACTCAGAATCCA+GGG 0.621356 4_1:-64117358 Msa0563680:CDS
AGTAACCTTAAAGTCAGCTG+AGG 0.622511 4_1:+64117211 None:intergenic
CCTGTTGAGCTAATTCAGGA+TGG 0.622578 4_1:-64114303 Msa0563680:CDS
CCGAAAACAGAAAGTAGATG+TGG 0.623324 4_1:-64112375 Msa0563680:CDS
ATGGCTCCATGAATCATCAT+CGG 0.623996 4_1:+64114015 None:intergenic
CTGTAGGAGAAGCCCACGAA+CGG 0.626185 4_1:-64118802 Msa0563680:CDS
TGATCATGATGTGGAAGTGA+TGG 0.631329 4_1:-64111749 Msa0563680:three_prime_UTR
GCGGGCATAAGGGACTGGCA+GGG 0.631483 4_1:-64113328 Msa0563680:CDS
GGCAGTTGGAATCTTGGACA+AGG 0.634216 4_1:-64112495 Msa0563680:CDS
ACTGGCAGGGTATCTTTCTG+AGG 0.634962 4_1:-64113315 Msa0563680:CDS
TGAGGTGCATCAGAGGTGGA+AGG 0.635095 4_1:+64115213 None:intergenic
AATGGAATGACTTACTCAGA+AGG 0.637909 4_1:-64117254 Msa0563680:CDS
CAGGCCCAGGCAGAATCAGA+GGG 0.639349 4_1:+64114348 None:intergenic
ATACAACTCAGGCAGCTGCA+CGG 0.642481 4_1:-64113127 Msa0563680:CDS
GTACTATATGAGCTAGGACT+CGG 0.643924 4_1:+64117371 None:intergenic
CTCTCTGGACCAGATAACCA+GGG 0.644821 4_1:-64117038 Msa0563680:CDS
AGAGCAGGGGATTATTCACA+TGG 0.645001 4_1:-64113843 Msa0563680:CDS
GTATATTGGTGATCATGATG+TGG 0.646907 4_1:-64111758 Msa0563680:three_prime_UTR
TCATCAAGGGATGATGTGCA+AGG 0.648898 4_1:-64117078 Msa0563680:CDS
CCAAACCACAGAATCATCAA+GGG 0.649452 4_1:-64117091 Msa0563680:CDS
AGCTAAGGTATCTTTGAGTG+AGG 0.652018 4_1:+64113160 None:intergenic
TCAATTCAGAAGAAATATCG+AGG 0.658574 4_1:-64112933 Msa0563680:CDS
TGTATCAAGAAGCTCAAAGG+AGG 0.661177 4_1:-64119556 Msa0563680:CDS
TGAGAAGTATCGTCAAGCCA+AGG 0.663944 4_1:-64112276 Msa0563680:intron
ATAAATTGTTACTATGCACA+TGG 0.664247 4_1:-64118198 Msa0563680:CDS
ACAAACCTTTGTAGTCTCAG+AGG 0.664931 4_1:+64114972 None:intergenic
GCTTACTTCCAGATCTCGGG+AGG 0.666657 4_1:-64113900 Msa0563680:CDS
CTTTGTCCAAGAAAGAGCAG+GGG 0.667079 4_1:-64113856 Msa0563680:CDS
GGAAAATATTGCTTTCAGTG+AGG 0.667748 4_1:-64113189 Msa0563680:CDS
AGAACCCTACTTTCCAGAGG+CGG 0.671098 4_1:-64118170 Msa0563680:CDS
ATTTCCGTGATGTCAATGGG+TGG 0.671605 4_1:-64113760 Msa0563680:CDS
TGAGCTATCTAAAAGTTCTG+CGG 0.677458 4_1:-64113249 Msa0563680:CDS
AAGGCAGTCTCCCCAGAATG+GGG 0.679096 4_1:-64115000 Msa0563680:CDS
AGCAGAACCCTACTTTCCAG+AGG 0.679127 4_1:-64118173 Msa0563680:CDS
GAAAAGATGGTCATGCCTGG+CGG 0.682808 4_1:-64118844 Msa0563680:CDS
AGATGGCGGAGAAAAGGAGT+CGG 0.685188 4_1:-64112464 Msa0563680:CDS
TTCATAGGCGTCATAAACAA+CGG 0.687883 4_1:+64117328 None:intergenic
AGAGGAATAACCCCATTCTG+GGG 0.688939 4_1:+64114990 None:intergenic
ACAAGGTTGTGCTAAGATGG+CGG 0.689666 4_1:-64112478 Msa0563680:CDS
TAACATGTGAGGTGCATCAG+AGG 0.693770 4_1:+64115206 None:intergenic
ATCTGGTCCAGAGAGAGCTG+CGG 0.698474 4_1:+64117046 None:intergenic
AGCATCAGGAGATTTGACCA+TGG 0.713604 4_1:+64112322 None:intergenic
TCATCCATAGAAGAATATGG+AGG 0.715779 4_1:+64115138 None:intergenic
TCTCTGGACCAGATAACCAG+GGG 0.716297 4_1:-64117037 Msa0563680:CDS
TAAAGGATAAGCTACAGGCG+TGG 0.717250 4_1:-64113922 Msa0563680:CDS
AGATCCAATTGGTAAAACTG+CGG 0.717630 4_1:-64113369 Msa0563680:CDS
TGTAATGAACGAGAACAATG+TGG 0.718490 4_1:+64117863 None:intergenic
TCATTACAGAGACACAAGTG+AGG 0.732114 4_1:-64117848 Msa0563680:intron
AAAACAGCTGGTAACATGTG+AGG 0.741853 4_1:+64115195 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGGTTTTTTTTTTTTTTTT+TGG - chr4_1:64112009-64112028 Msa0563680:intron 10.0%
!!! TGGTTTTTTTTTTTTTTTTT+GGG - chr4_1:64112010-64112029 Msa0563680:intron 10.0%
!!! AATTTTAGTATATAAGAATA+TGG + chr4_1:64114353-64114372 None:intergenic 10.0%
!! TTTATAAATAAGAGTTTAAT+TGG - chr4_1:64117201-64117220 Msa0563680:CDS 10.0%
!!! TTAGTTTGTTTATTTATTTT+TGG - chr4_1:64118262-64118281 Msa0563680:intron 10.0%
!!! TAGTTTGTTTATTTATTTTT+GGG - chr4_1:64118263-64118282 Msa0563680:intron 10.0%
!!! ATATCAAGAATATTTTAAAA+GGG + chr4_1:64118450-64118469 None:intergenic 10.0%
!!! AATATCAAGAATATTTTAAA+AGG + chr4_1:64118451-64118470 None:intergenic 10.0%
!! TTTACTCTTTATACTTAATT+TGG - chr4_1:64111915-64111934 Msa0563680:exon 15.0%
!! TAAATTGTTGAAAATTCTAA+TGG + chr4_1:64112171-64112190 None:intergenic 15.0%
!!! TAGAAAAAGTTTATTTCTTA+GGG - chr4_1:64112207-64112226 Msa0563680:intron 15.0%
!! AAAATGAAAATGAAAATGAT+AGG - chr4_1:64112291-64112310 Msa0563680:CDS 15.0%
!!! ATTTGACTTTATTTTATCTT+TGG + chr4_1:64112761-64112780 None:intergenic 15.0%
!!! TTTTTAATTTTAATAACCCA+GGG + chr4_1:64113317-64113336 None:intergenic 15.0%
!!! ATTTTTAATTTTAATAACCC+AGG + chr4_1:64113318-64113337 None:intergenic 15.0%
!! AAAATAATAAATTATCCATC+TGG - chr4_1:64113498-64113517 Msa0563680:intron 15.0%
!! GTTGGAAAAAATAATAAAAA+AGG - chr4_1:64115296-64115315 Msa0563680:CDS 15.0%
!! ATTAAACAAGAAAAATACTA+AGG - chr4_1:64115700-64115719 Msa0563680:intron 15.0%
!! AAAAAACTGTTAAATTGATA+AGG + chr4_1:64116690-64116709 None:intergenic 15.0%
!!! ATCAATTTAACAGTTTTTTT+TGG - chr4_1:64116691-64116710 Msa0563680:intron 15.0%
!! AAAACAGAAATTTACTATTA+AGG - chr4_1:64116921-64116940 Msa0563680:intron 15.0%
!! AAATCTATATAAAATTGGTT+TGG - chr4_1:64117147-64117166 Msa0563680:CDS 15.0%
!! AATTAAATCCATAAATAATC+AGG - chr4_1:64117389-64117408 Msa0563680:CDS 15.0%
!! TTTCTTATCTTAAAATGATT+TGG - chr4_1:64117486-64117505 Msa0563680:intron 15.0%
!!! AGTTTGTTTATTTATTTTTG+GGG - chr4_1:64118264-64118283 Msa0563680:intron 15.0%
!!! TTTTCAGTAAACAAAAATAT+TGG - chr4_1:64118332-64118351 Msa0563680:intron 15.0%
!!! TATTTCTAATTTATTTGTGT+AGG - chr4_1:64119376-64119395 Msa0563680:intron 15.0%
!!! GAAATCTTTTGATTATATTT+TGG - chr4_1:64119713-64119732 Msa0563680:intron 15.0%
!!! TTTTGTTACAATGTATAAAT+TGG - chr4_1:64119916-64119935 Msa0563680:intron 15.0%
!! AATCTTTGTAAAGTATAAAA+TGG - chr4_1:64120221-64120240 Msa0563680:five_prime_UTR 15.0%
!!! GTAGAAAAAGTTTATTTCTT+AGG - chr4_1:64112206-64112225 Msa0563680:intron 20.0%
!! TAGTTAGTTAGTTAGTTATT+TGG - chr4_1:64112573-64112592 Msa0563680:intron 20.0%
!! TACTTGTATACTTGTATATA+AGG - chr4_1:64112622-64112641 Msa0563680:intron 20.0%
!! TCATATTATACATGTAAAAG+AGG - chr4_1:64113273-64113292 Msa0563680:CDS 20.0%
!! CATATTATACATGTAAAAGA+GGG - chr4_1:64113274-64113293 Msa0563680:CDS 20.0%
!!! TTTTAATTTTAATAACCCAG+GGG + chr4_1:64113316-64113335 None:intergenic 20.0%
!! AAAACATAATTCACTTTCTA+TGG - chr4_1:64113592-64113611 Msa0563680:intron 20.0%
!! TTTAAAGGATATACAACATA+TGG + chr4_1:64113873-64113892 None:intergenic 20.0%
!!! ATATTGTATGTTCGTTTTAA+AGG + chr4_1:64113888-64113907 None:intergenic 20.0%
!!! AAATGAATTGCAAAGATTTT+AGG - chr4_1:64113949-64113968 Msa0563680:CDS 20.0%
!! ATTAAACCATATTACACAAA+TGG + chr4_1:64114207-64114226 None:intergenic 20.0%
!! TGATTACAATTTAACAAATC+AGG + chr4_1:64114326-64114345 None:intergenic 20.0%
!!! CTATTTTATGATGGATATAA+TGG - chr4_1:64114926-64114945 Msa0563680:intron 20.0%
!! ATTTAATCAGTGAAATATCT+GGG - chr4_1:64115000-64115019 Msa0563680:CDS 20.0%
!! GCAAATAAGAAGATTTATTA+TGG + chr4_1:64115194-64115213 None:intergenic 20.0%
!! AAGATTTACATGTAAAAAAG+TGG - chr4_1:64115389-64115408 Msa0563680:intron 20.0%
!! TCAAATTATGAAAGAAGATA+TGG + chr4_1:64116222-64116241 None:intergenic 20.0%
!! TAAAATTTGATACTTAAAGC+AGG - chr4_1:64116558-64116577 Msa0563680:intron 20.0%
!!! AGTTTTTTTTGGCTTATTTT+GGG - chr4_1:64116702-64116721 Msa0563680:intron 20.0%
!!! TATAGATTGTAAAGATTTTC+AGG + chr4_1:64117114-64117133 None:intergenic 20.0%
!!! ATTTTATATAGATTTCCACT+AGG + chr4_1:64117142-64117161 None:intergenic 20.0%
!! AGTGGAAATCTATATAAAAT+TGG - chr4_1:64117142-64117161 Msa0563680:CDS 20.0%
!!! CTCTTATTTATAAATAGCAT+GGG + chr4_1:64117195-64117214 None:intergenic 20.0%
!!! ACTCTTATTTATAAATAGCA+TGG + chr4_1:64117196-64117215 None:intergenic 20.0%
!! GTCAATTTAGGAATTTAATA+CGG - chr4_1:64117294-64117313 Msa0563680:CDS 20.0%
!!! TGTTATTACTTGTTAGATTT+GGG - chr4_1:64117832-64117851 Msa0563680:intron 20.0%
!!! AAGTGTCTTTTAAATAATTC+AGG + chr4_1:64118411-64118430 None:intergenic 20.0%
!! TAAAAGACACTTTCATAATT+TGG - chr4_1:64118419-64118438 Msa0563680:intron 20.0%
!!! AAGAATATTTTAAAAGGGAT+CGG + chr4_1:64118445-64118464 None:intergenic 20.0%
!!! GCATTTTTCATTCAAAAAAA+TGG - chr4_1:64119293-64119312 Msa0563680:intron 20.0%
!! AAAAATGGAGAAACAATTAT+AGG - chr4_1:64119308-64119327 Msa0563680:intron 20.0%
!!! TGTAGAAGATTTTTTAAACA+TGG - chr4_1:64119997-64120016 Msa0563680:intron 20.0%
!!! ATGATTTTTATTAATATCCC+TGG - chr4_1:64120023-64120042 Msa0563680:intron 20.0%
!!! TGATTTTTATTAATATCCCT+GGG - chr4_1:64120024-64120043 Msa0563680:intron 20.0%
!! AAAGTAGATTGTATGTATAT+TGG - chr4_1:64120168-64120187 Msa0563680:five_prime_UTR 20.0%
! TGGTTTATGATAATAGTAGT+TGG + chr4_1:64112151-64112170 None:intergenic 25.0%
!!! AAGATTTTTTGTCATAGTAG+CGG + chr4_1:64112258-64112277 None:intergenic 25.0%
! TATGACAAAAAATCTTGGAA+AGG - chr4_1:64112262-64112281 Msa0563680:intron 25.0%
! TGAAAATGAAAATGATAGGA+AGG - chr4_1:64112295-64112314 Msa0563680:CDS 25.0%
!! ACAGTTATAACTTTTAACAC+AGG + chr4_1:64112513-64112532 None:intergenic 25.0%
! TATACAAGTAAAAAGCTACA+AGG + chr4_1:64112612-64112631 None:intergenic 25.0%
! CATAAAAATAGCTTATACGT+TGG + chr4_1:64112737-64112756 None:intergenic 25.0%
! TGCATGTTAACATTATCAAT+TGG - chr4_1:64113016-64113035 Msa0563680:CDS 25.0%
! TTATACGTTGTTCATGAAAA+AGG - chr4_1:64113195-64113214 Msa0563680:CDS 25.0%
! TATAACTACAAAACAGGAAT+TGG + chr4_1:64113553-64113572 None:intergenic 25.0%
! AAGTACTATAACTACAAAAC+AGG + chr4_1:64113559-64113578 None:intergenic 25.0%
!! GTGAATTATGTTTTCAAAAC+AGG + chr4_1:64113586-64113605 None:intergenic 25.0%
! ATGTGCATAGTAACAATTTA+TGG + chr4_1:64113743-64113762 None:intergenic 25.0%
! ATAAATTGTTACTATGCACA+TGG - chr4_1:64113742-64113761 Msa0563680:CDS 25.0%
!! TAATAAGCTTGATAGTATGA+AGG + chr4_1:64113850-64113869 None:intergenic 25.0%
! GATCAAATTATGTATGTTGA+TGG + chr4_1:64113992-64114011 None:intergenic 25.0%
! GTACTATTATTATGCTTATC+TGG + chr4_1:64114138-64114157 None:intergenic 25.0%
! TAACTAATGAAGAACATGAT+AGG + chr4_1:64114232-64114251 None:intergenic 25.0%
! GAAAAGATATAAACAGCTTA+TGG + chr4_1:64114403-64114422 None:intergenic 25.0%
!!! TTTATGATGGATATAATGGA+AGG - chr4_1:64114930-64114949 Msa0563680:intron 25.0%
! CATTTAATCAGTGAAATATC+TGG - chr4_1:64114999-64115018 Msa0563680:CDS 25.0%
! TAAAAGAAAGTCGTCTATAA+GGG + chr4_1:64115060-64115079 None:intergenic 25.0%
! CTTTCATACATTATGTAACA+AGG + chr4_1:64115444-64115463 None:intergenic 25.0%
!! AGATTATTTTCCCTATTTCA+TGG - chr4_1:64115462-64115481 Msa0563680:intron 25.0%
! AAAACTCAATTTGAGAGAAA+AGG - chr4_1:64115587-64115606 Msa0563680:intron 25.0%
! TTTAATTAGAGTCCTAATTC+AGG + chr4_1:64115686-64115705 None:intergenic 25.0%
! CAAGAAAAATACTAAGGTTA+TGG - chr4_1:64115706-64115725 Msa0563680:intron 25.0%
! TACAAAAAAAGCCACTAATA+AGG - chr4_1:64115912-64115931 Msa0563680:intron 25.0%
! GCTTTACATTGATATTGTAT+AGG - chr4_1:64116012-64116031 Msa0563680:intron 25.0%
!! TTATGAAATTGTTGTGGTTT+TGG - chr4_1:64116145-64116164 Msa0563680:intron 25.0%
!!! TGAAAAAACTAACTAGCTTT+AGG + chr4_1:64116188-64116207 None:intergenic 25.0%
!!! GATGTTTAATTTTAACGAAG+AGG + chr4_1:64116285-64116304 None:intergenic 25.0%
! AGATCTGAATAAACGTAAAT+TGG + chr4_1:64116504-64116523 None:intergenic 25.0%
!!! CAGTTTTTTTTGGCTTATTT+TGG - chr4_1:64116701-64116720 Msa0563680:intron 25.0%
! AATCCATAAATAATCAGGTT+AGG - chr4_1:64117394-64117413 Msa0563680:CDS 25.0%
! TATCCTAACCTGATTATTTA+TGG + chr4_1:64117400-64117419 None:intergenic 25.0%
! ACATTTAAGCTTAACTAGTT+TGG - chr4_1:64117445-64117464 Msa0563680:intron 25.0%
!! CTGTTATTACTTGTTAGATT+TGG - chr4_1:64117831-64117850 Msa0563680:intron 25.0%
! AAGTAATGATAACAACGAAT+CGG - chr4_1:64117881-64117900 Msa0563680:intron 25.0%
! GATCACATTCATTTAGAAAA+CGG - chr4_1:64118852-64118871 Msa0563680:CDS 25.0%
!! TCTCATCATTTCAATTTTTC+AGG + chr4_1:64119115-64119134 None:intergenic 25.0%
! ATTTGTGAACAGAAATTAAG+AGG - chr4_1:64119204-64119223 Msa0563680:intron 25.0%
! AGAAATTAAGAGGATCTATA+AGG - chr4_1:64119214-64119233 Msa0563680:intron 25.0%
! TGAAAAATGCTAGTATAGTT+AGG + chr4_1:64119283-64119302 None:intergenic 25.0%
!! TTTGATAATAATGCAGTTGA+AGG + chr4_1:64119349-64119368 None:intergenic 25.0%
!! GAAGCATTACAAAGTATTAT+GGG - chr4_1:64119424-64119443 Msa0563680:intron 25.0%
! AATCAAATGCTAAAGAAAAG+AGG + chr4_1:64119748-64119767 None:intergenic 25.0%
!! CATCATCAATTTTTATAGGA+TGG + chr4_1:64119776-64119795 None:intergenic 25.0%
! AAAACATTTGATTATGTGAG+TGG + chr4_1:64119801-64119820 None:intergenic 25.0%
! AAATGGTTTATAGATCTTCA+TGG + chr4_1:64119871-64119890 None:intergenic 25.0%
! ATGACAATGTAAAGTCAAAA+TGG + chr4_1:64119888-64119907 None:intergenic 25.0%
! ACAAACAAGTGAAGAAAAAT+CGG - chr4_1:64119964-64119983 Msa0563680:intron 25.0%
!! GATTTTTATTAATATCCCTG+GGG - chr4_1:64120025-64120044 Msa0563680:intron 25.0%
! CAATAGAGTTGAAATTAGTA+AGG + chr4_1:64120062-64120081 None:intergenic 25.0%
GTGAAACAGTAGAATTGATT+TGG + chr4_1:64111765-64111784 None:intergenic 30.0%
AGAAGAAGAGTAATTGAATC+TGG + chr4_1:64111832-64111851 None:intergenic 30.0%
!!! TTTTTTTTTTGGGACCATCA+TGG - chr4_1:64112020-64112039 Msa0563680:intron 30.0%
GCTACTATGACAAAAAATCT+TGG - chr4_1:64112257-64112276 Msa0563680:intron 30.0%
! AAAAAATCTTGGAAAGGTGT+GGG - chr4_1:64112268-64112287 Msa0563680:intron 30.0%
ACAATTATTATTGTTGCCTC+AGG - chr4_1:64112338-64112357 Msa0563680:CDS 30.0%
GATATCATATTCATAACCTG+AGG + chr4_1:64112357-64112376 None:intergenic 30.0%
! GAGTTAAAGATGTTACTTGT+TGG + chr4_1:64112488-64112507 None:intergenic 30.0%
ATAACTGTTAGATGTTAGCT+AGG - chr4_1:64112525-64112544 Msa0563680:CDS 30.0%
TAAGTTGCTTATCCAAAACA+GGG + chr4_1:64112676-64112695 None:intergenic 30.0%
! TTAAGTTGCTTATCCAAAAC+AGG + chr4_1:64112677-64112696 None:intergenic 30.0%
! TTTTCGGCTTATAGCTTATA+TGG + chr4_1:64112789-64112808 None:intergenic 30.0%
AATGAATCTATTCCTCTCAA+CGG + chr4_1:64112911-64112930 None:intergenic 30.0%
! AGTCACTCTAAGAAACAAAA+AGG + chr4_1:64112985-64113004 None:intergenic 30.0%
!! TATCAATTGGTCTTCTAAAC+AGG - chr4_1:64113029-64113048 Msa0563680:CDS 30.0%
GAAAAAGGAAAATTTATCCG+CGG - chr4_1:64113210-64113229 Msa0563680:CDS 30.0%
AAGCATCTTGAAAGTTGAAA+GGG + chr4_1:64113473-64113492 None:intergenic 30.0%
! AAAGCATCTTGAAAGTTGAA+AGG + chr4_1:64113474-64113493 None:intergenic 30.0%
! ATGGCTATATTCATGACTTT+TGG - chr4_1:64113611-64113630 Msa0563680:intron 30.0%
! CAAATTATGTATGTTGATGG+TGG + chr4_1:64113989-64114008 None:intergenic 30.0%
! ATTTTCTATAATGTCCCTAC+AGG - chr4_1:64114163-64114182 Msa0563680:CDS 30.0%
AGGAATCCATTTGTGTAATA+TGG - chr4_1:64114198-64114217 Msa0563680:intron 30.0%
!! GCTTATGGATGGATTATTAA+AGG + chr4_1:64114388-64114407 None:intergenic 30.0%
AGATATAAACAGCTTATGGA+TGG + chr4_1:64114399-64114418 None:intergenic 30.0%
! TTCTTAAGCTTGTTCTTGTA+TGG - chr4_1:64114420-64114439 Msa0563680:intron 30.0%
GAAGTTACCTCTTATAACAA+TGG - chr4_1:64114668-64114687 Msa0563680:intron 30.0%
AGTCATTCCATTGTTATAAG+AGG + chr4_1:64114678-64114697 None:intergenic 30.0%
CTAAAACAGCATATAGATTG+AGG + chr4_1:64115027-64115046 None:intergenic 30.0%
GTAAAAGAAAGTCGTCTATA+AGG + chr4_1:64115061-64115080 None:intergenic 30.0%
AGTATTCTGTAATTGTCGAT+TGG - chr4_1:64115122-64115141 Msa0563680:CDS 30.0%
ACAACCAGCATATAACAATT+GGG + chr4_1:64115256-64115275 None:intergenic 30.0%
AACAACCAGCATATAACAAT+TGG + chr4_1:64115257-64115276 None:intergenic 30.0%
!! GGTTGTTTTGTGTGAATAAA+AGG - chr4_1:64115270-64115289 Msa0563680:CDS 30.0%
TGTGTGAATAAAAGGAATGT+TGG - chr4_1:64115278-64115297 Msa0563680:CDS 30.0%
AAAAGTGGAACAGTCTTTAA+AGG - chr4_1:64115404-64115423 Msa0563680:intron 30.0%
ATGTAACAAGGAATTTCCTA+TGG + chr4_1:64115432-64115451 None:intergenic 30.0%
TACTTGTCAACCATGAAATA+GGG + chr4_1:64115475-64115494 None:intergenic 30.0%
TTACTTGTCAACCATGAAAT+AGG + chr4_1:64115476-64115495 None:intergenic 30.0%
TTGTCTTGAAACATTTCATG+TGG - chr4_1:64115507-64115526 Msa0563680:CDS 30.0%
AACAGTGTTACATGGTTATA+GGG - chr4_1:64115640-64115659 Msa0563680:intron 30.0%
ATGGATTTCAGGCTTAAAAA+AGG - chr4_1:64115779-64115798 Msa0563680:intron 30.0%
! TATTTTCCTCGTTTAATCAG+AGG + chr4_1:64115894-64115913 None:intergenic 30.0%
!! CATTGTTTAAGCCTTATTAG+TGG + chr4_1:64115926-64115945 None:intergenic 30.0%
CACTAATAAGGCTTAAACAA+TGG - chr4_1:64115924-64115943 Msa0563680:intron 30.0%
!! AAGGCTTAAACAATGGATTT+TGG - chr4_1:64115931-64115950 Msa0563680:intron 30.0%
!! AGGCTTAAACAATGGATTTT+GGG - chr4_1:64115932-64115951 Msa0563680:intron 30.0%
CAATTTCATAAGCAAACCTT+TGG + chr4_1:64116136-64116155 None:intergenic 30.0%
GTTTGCTTATGAAATTGTTG+TGG - chr4_1:64116139-64116158 Msa0563680:intron 30.0%
!! AACTAGCTTTAGGAGAAAAT+TGG + chr4_1:64116178-64116197 None:intergenic 30.0%
AAAGAAGATATGGTTTACAG+TGG + chr4_1:64116212-64116231 None:intergenic 30.0%
GAGACTATAAATGCTAAAAG+TGG - chr4_1:64116319-64116338 Msa0563680:intron 30.0%
AAAGTGGTGTATATTCTTGT+AGG - chr4_1:64116335-64116354 Msa0563680:intron 30.0%
TATATTCTTGTAGGTGATAG+TGG - chr4_1:64116344-64116363 Msa0563680:intron 30.0%
! GAAATGAAAAGGCTTTATCA+TGG - chr4_1:64116408-64116427 Msa0563680:intron 30.0%
TTCACCATCTTCTTCATTAA+GGG - chr4_1:64116585-64116604 Msa0563680:intron 30.0%
! AATTTCAACACTGATAATGC+TGG - chr4_1:64116643-64116662 Msa0563680:intron 30.0%
GTTTCATCCATAGAAGAATA+TGG + chr4_1:64116808-64116827 None:intergenic 30.0%
GATATTTGAGGAGTCAATTT+AGG - chr4_1:64117282-64117301 Msa0563680:CDS 30.0%
! TATGCACAGGTTTTCATTAT+TGG - chr4_1:64117553-64117572 Msa0563680:intron 30.0%
! ATGCACAGGTTTTCATTATT+GGG - chr4_1:64117554-64117573 Msa0563680:intron 30.0%
AGTAATGATAACAACGAATC+GGG - chr4_1:64117882-64117901 Msa0563680:intron 30.0%
! GGGAATTTTCATAAAACAGA+AGG - chr4_1:64117902-64117921 Msa0563680:intron 30.0%
ATAGTAGAGCCTCTATAATA+TGG + chr4_1:64117947-64117966 None:intergenic 30.0%
ATTATAGAGGCTCTACTATT+TGG - chr4_1:64117948-64117967 Msa0563680:intron 30.0%
ATTCTTCTGGTACTATCAAT+TGG - chr4_1:64117979-64117998 Msa0563680:intron 30.0%
ATAAATTTCCGTGATGTCAA+TGG - chr4_1:64118176-64118195 Msa0563680:CDS 30.0%
TAAATTTCCGTGATGTCAAT+GGG - chr4_1:64118177-64118196 Msa0563680:CDS 30.0%
GATGTTGATATTTCCATTCA+AGG - chr4_1:64118290-64118309 Msa0563680:intron 30.0%
!! AAGTGTTTGTTATTCCATAC+AGG - chr4_1:64118480-64118499 Msa0563680:intron 30.0%
!! AGTGTTTGTTATTCCATACA+GGG - chr4_1:64118481-64118500 Msa0563680:intron 30.0%
TATTCCATACAGGGAAAAAA+TGG - chr4_1:64118490-64118509 Msa0563680:intron 30.0%
! ACTGAAAGCAATATTTTCCT+TGG + chr4_1:64118750-64118769 None:intergenic 30.0%
TCAATTCAGAAGAAATATCG+AGG - chr4_1:64119007-64119026 Msa0563680:intron 30.0%
TTGAAATGATGAGAGCTATA+TGG - chr4_1:64119121-64119140 Msa0563680:intron 30.0%
!! GGAAGCATTACAAAGTATTA+TGG - chr4_1:64119423-64119442 Msa0563680:intron 30.0%
AGTAGATGTGGAAATTGAAA+AGG - chr4_1:64119577-64119596 Msa0563680:CDS 30.0%
! GGCACATCATCAATTTTTAT+AGG + chr4_1:64119780-64119799 None:intergenic 30.0%
TCTATTGCATTATCAGTTTC+CGG - chr4_1:64120075-64120094 Msa0563680:intron 30.0%
AAAGAAAGAGACAAGAGAGT+TGG + chr4_1:64111707-64111726 None:intergenic 35.0%
!!! CAAAAAGCAGAGAGCATTTT+TGG + chr4_1:64111790-64111809 None:intergenic 35.0%
AAAAACCAAGTCAAGTGATG+TGG + chr4_1:64111998-64112017 None:intergenic 35.0%
CGTGATTTACAAAACCATGA+TGG + chr4_1:64112037-64112056 None:intergenic 35.0%
TTTCTTAGGGTGTAGAAAAG+AGG - chr4_1:64112220-64112239 Msa0563680:intron 35.0%
CAAAAAATCTTGGAAAGGTG+TGG - chr4_1:64112267-64112286 Msa0563680:intron 35.0%
ATCTGTATCAAGAAGCTCAA+AGG - chr4_1:64112381-64112400 Msa0563680:CDS 35.0%
AAAATGTACATCACTTCTGC+AGG + chr4_1:64112419-64112438 None:intergenic 35.0%
GTTGGCACTTATATGATAAG+CGG + chr4_1:64112719-64112738 None:intergenic 35.0%
TATAAGCCGAAAACAGCTTA+TGG - chr4_1:64112796-64112815 Msa0563680:intron 35.0%
!! ACATGTCCATAAGCTGTTTT+CGG + chr4_1:64112805-64112824 None:intergenic 35.0%
TGTCACAAGCAGTTTCTATA+AGG - chr4_1:64112822-64112841 Msa0563680:intron 35.0%
TTACGTTTCTTCCGAAAAGA+TGG - chr4_1:64113083-64113102 Msa0563680:CDS 35.0%
TATAAAATTCATAGCACCCC+TGG - chr4_1:64113297-64113316 Msa0563680:CDS 35.0%
ATAAAATTCATAGCACCCCT+GGG - chr4_1:64113298-64113317 Msa0563680:CDS 35.0%
! TAAAAAGCGTAATTGCCAGA+TGG + chr4_1:64113516-64113535 None:intergenic 35.0%
!!! GGTCAACATTTGTTTTGCAA+TGG - chr4_1:64113632-64113651 Msa0563680:intron 35.0%
CAGCAGCAAAAATTTACTCA+CGG + chr4_1:64113814-64113833 None:intergenic 35.0%
AGTATGAAGGACGAACAATT+AGG + chr4_1:64113837-64113856 None:intergenic 35.0%
TGTAATGAACGAGAACAATG+TGG + chr4_1:64114080-64114099 None:intergenic 35.0%
CACGTGAGTACAAATAAACA+TGG + chr4_1:64114486-64114505 None:intergenic 35.0%
TATTTGTACTCACGTGTTGT+AGG - chr4_1:64114490-64114509 Msa0563680:intron 35.0%
ATTTGTACTCACGTGTTGTA+GGG - chr4_1:64114491-64114510 Msa0563680:intron 35.0%
TTCTGAGTACTATATGAGCT+AGG + chr4_1:64114578-64114597 None:intergenic 35.0%
TCATATAGTACTCAGAATCC+AGG - chr4_1:64114581-64114600 Msa0563680:intron 35.0%
CATATAGTACTCAGAATCCA+GGG - chr4_1:64114582-64114601 Msa0563680:intron 35.0%
TTCATAGGCGTCATAAACAA+CGG + chr4_1:64114615-64114634 None:intergenic 35.0%
AATGGAATGACTTACTCAGA+AGG - chr4_1:64114686-64114705 Msa0563680:intron 35.0%
! CAAGAGAATTTTACCACAGA+AGG + chr4_1:64115219-64115238 None:intergenic 35.0%
CATATAACAATTGGGGAATC+AGG + chr4_1:64115248-64115267 None:intergenic 35.0%
ATTCCCCAATTGTTATATGC+TGG - chr4_1:64115249-64115268 Msa0563680:CDS 35.0%
CAACCAGCATATAACAATTG+GGG + chr4_1:64115255-64115274 None:intergenic 35.0%
! ACAGTCTTTAAAGGTTCCAT+AGG - chr4_1:64115413-64115432 Msa0563680:intron 35.0%
TGATGAGTCATATGAAGACT+AGG - chr4_1:64115531-64115550 Msa0563680:CDS 35.0%
TTGCAAAGAACAGTGTTACA+TGG - chr4_1:64115632-64115651 Msa0563680:intron 35.0%
GAACAGTGTTACATGGTTAT+AGG - chr4_1:64115639-64115658 Msa0563680:intron 35.0%
! ATGCTTAAGCAATGGATTTC+AGG - chr4_1:64115768-64115787 Msa0563680:intron 35.0%
CAACAGGAGTTTACATGATT+GGG + chr4_1:64115969-64115988 None:intergenic 35.0%
TGGGCTTAAGTGAAGTTATA+CGG + chr4_1:64116038-64116057 None:intergenic 35.0%
TTAAGCCCATTCAACATCAT+TGG - chr4_1:64116049-64116068 Msa0563680:intron 35.0%
TAAACATCAACTGCTAAGAG+AGG - chr4_1:64116297-64116316 Msa0563680:intron 35.0%
TTTCCCTGATGGAAATGAAA+AGG - chr4_1:64116397-64116416 Msa0563680:intron 35.0%
! AAGCCTTTTCATTTCCATCA+GGG + chr4_1:64116403-64116422 None:intergenic 35.0%
! AAAGCCTTTTCATTTCCATC+AGG + chr4_1:64116404-64116423 None:intergenic 35.0%
GTTCACCATCTTCTTCATTA+AGG - chr4_1:64116584-64116603 Msa0563680:intron 35.0%
! TTTGTCCAGCAATAGTTTTC+CGG + chr4_1:64116625-64116644 None:intergenic 35.0%
ACTTCCTCCATATTCTTCTA+TGG - chr4_1:64116798-64116817 Msa0563680:intron 35.0%
TCATCCATAGAAGAATATGG+AGG + chr4_1:64116805-64116824 None:intergenic 35.0%
TTGTTTGACCAAAGCCAAAT+TGG - chr4_1:64116859-64116878 Msa0563680:intron 35.0%
!! TTATTCCTCTGAGACTACAA+AGG - chr4_1:64116963-64116982 Msa0563680:intron 35.0%
! ACAAAGGTTTGTTCCTTTCT+AGG - chr4_1:64116979-64116998 Msa0563680:intron 35.0%
CAGTCAGAAATCATAGTGTA+AGG + chr4_1:64117020-64117039 None:intergenic 35.0%
CTTACACTATGATTTCTGAC+TGG - chr4_1:64117018-64117037 Msa0563680:CDS 35.0%
!! GTAAAGATTTTCAGGAACCT+AGG + chr4_1:64117106-64117125 None:intergenic 35.0%
ACAATCTATATACGACCTAG+TGG - chr4_1:64117124-64117143 Msa0563680:CDS 35.0%
TTTCACCGCATAGATATTTG+AGG - chr4_1:64117270-64117289 Msa0563680:CDS 35.0%
TGACTCCTCAAATATCTATG+CGG + chr4_1:64117278-64117297 None:intergenic 35.0%
ACAAGTAATAACAGCTCATC+TGG + chr4_1:64117825-64117844 None:intergenic 35.0%
TTCATGGAGCCATATTATAG+AGG - chr4_1:64117935-64117954 Msa0563680:intron 35.0%
TTTGGCAGTGAAAATTCTTC+TGG - chr4_1:64117966-64117985 Msa0563680:intron 35.0%
CTATGCATTTGAACCTTGAA+TGG + chr4_1:64118306-64118325 None:intergenic 35.0%
AGATCCAATTGGTAAAACTG+CGG - chr4_1:64118571-64118590 Msa0563680:intron 35.0%
TGAGCTATCTAAAAGTTCTG+CGG - chr4_1:64118691-64118710 Msa0563680:intron 35.0%
AACTGTTAGTAATGTCTCCA+AGG - chr4_1:64118730-64118749 Msa0563680:intron 35.0%
GGAAAATATTGCTTTCAGTG+AGG - chr4_1:64118751-64118770 Msa0563680:intron 35.0%
ATATTGCTTTCAGTGAGGAT+CGG - chr4_1:64118756-64118775 Msa0563680:intron 35.0%
GAAACAAATGCTGTTATGAG+TGG - chr4_1:64118884-64118903 Msa0563680:CDS 35.0%
GATATAAGTGCAAGTAGTGT+TGG - chr4_1:64118911-64118930 Msa0563680:intron 35.0%
TTCAGAAGAAATATCGAGGT+TGG - chr4_1:64119011-64119030 Msa0563680:intron 35.0%
AAGAAATATCGAGGTTGGAA+AGG - chr4_1:64119016-64119035 Msa0563680:intron 35.0%
!! CCTGTATCTTCACTACTTTT+TGG + chr4_1:64119066-64119085 None:intergenic 35.0%
CCAAAAAGTAGTGAAGATAC+AGG - chr4_1:64119063-64119082 Msa0563680:intron 35.0%
AGTAGTGAAGATACAGGTAA+TGG - chr4_1:64119069-64119088 Msa0563680:intron 35.0%
CTTTGTAATGCTTCCTAACT+TGG + chr4_1:64119418-64119437 None:intergenic 35.0%
! TACAAAGTATTATGGGCAGT+TGG - chr4_1:64119431-64119450 Msa0563680:intron 35.0%
! CCACATCTACTTTCTGTTTT+CGG + chr4_1:64119568-64119587 None:intergenic 35.0%
! TTTTGCATGATGCTTCCATA+GGG - chr4_1:64119817-64119836 Msa0563680:intron 35.0%
TCACAGTATAAAATGCCCTA+TGG + chr4_1:64119835-64119854 None:intergenic 35.0%
! GCATTTTATACTGTGAGAGT+CGG - chr4_1:64119839-64119858 Msa0563680:intron 35.0%
! TAAATTGGCAACTCTTTTGC+AGG - chr4_1:64119931-64119950 Msa0563680:intron 35.0%
TTCACTTGTTTGTGCAAGTT+CGG + chr4_1:64119957-64119976 None:intergenic 35.0%
! GTATATTGGTGATCATGATG+TGG - chr4_1:64120182-64120201 Msa0563680:five_prime_UTR 35.0%
! AAAATGGTCTTGAATGCTGT+AGG - chr4_1:64120237-64120256 Msa0563680:five_prime_UTR 35.0%
TAAACAAACACGCGTAGAGA+TGG + chr4_1:64111741-64111760 None:intergenic 40.0%
TCTTCTTCTACCATGACATC+TGG - chr4_1:64111843-64111862 Msa0563680:three_prime_UTR 40.0%
ACATGTGTTACCAGATGTCA+TGG + chr4_1:64111856-64111875 None:intergenic 40.0%
TGTTTCCTAGATTGAGTGAG+TGG - chr4_1:64111962-64111981 Msa0563680:CDS 40.0%
TTCAACCACTCACTCAATCT+AGG + chr4_1:64111970-64111989 None:intergenic 40.0%
TGTATCAAGAAGCTCAAAGG+AGG - chr4_1:64112384-64112403 Msa0563680:CDS 40.0%
! ATGTTACTTGTTGGCTGTTG+CGG + chr4_1:64112479-64112498 None:intergenic 40.0%
GTTAGCTAGGAGTAACTGAT+CGG - chr4_1:64112538-64112557 Msa0563680:CDS 40.0%
! TTCACATTTACGCCCTGTTT+TGG - chr4_1:64112661-64112680 Msa0563680:intron 40.0%
!! CAATTGGTCTTCTAAACAGG+TGG - chr4_1:64113032-64113051 Msa0563680:CDS 40.0%
AAAAGAGATGGAAGAGCTGT+AGG - chr4_1:64113122-64113141 Msa0563680:CDS 40.0%
TGAACAACATTCCCATGACT+GGG + chr4_1:64113256-64113275 None:intergenic 40.0%
ATGAACAACATTCCCATGAC+TGG + chr4_1:64113257-64113276 None:intergenic 40.0%
TCACACTAATCTGCATGACT+AGG - chr4_1:64113702-64113721 Msa0563680:intron 40.0%
ACTAATCTGCATGACTAGGT+TGG - chr4_1:64113706-64113725 Msa0563680:intron 40.0%
TCATTACAGAGACACAAGTG+AGG - chr4_1:64114092-64114111 Msa0563680:CDS 40.0%
ATGTCCCTACAGGAAAACTT+CGG - chr4_1:64114173-64114192 Msa0563680:intron 40.0%
! CTTTCCGAAGTTTTCCTGTA+GGG + chr4_1:64114180-64114199 None:intergenic 40.0%
AAAGCGAACAGTGCAAAAGA+AGG + chr4_1:64114273-64114292 None:intergenic 40.0%
GTACTATATGAGCTAGGACT+CGG + chr4_1:64114572-64114591 None:intergenic 40.0%
! GAAGCTCTGATTAGGTTCAT+AGG + chr4_1:64114630-64114649 None:intergenic 40.0%
! AGAAACCTCAGCTGACTTTA+AGG - chr4_1:64114724-64114743 Msa0563680:intron 40.0%
AGTAACCTTAAAGTCAGCTG+AGG + chr4_1:64114732-64114751 None:intergenic 40.0%
AACTTAACTGCACCTCCAAT+CGG + chr4_1:64114766-64114785 None:intergenic 40.0%
GGTGCAGTTAAGTTTGAATG+AGG - chr4_1:64114772-64114791 Msa0563680:intron 40.0%
! ATTCTGTGGTTTGGAATCAC+CGG + chr4_1:64114843-64114862 None:intergenic 40.0%
TCCAAACCACAGAATCATCA+AGG - chr4_1:64114848-64114867 Msa0563680:intron 40.0%
CCAAACCACAGAATCATCAA+GGG - chr4_1:64114849-64114868 Msa0563680:intron 40.0%
! ATCATCCCTTGATGATTCTG+TGG + chr4_1:64114857-64114876 None:intergenic 40.0%
TAAAATAGCCCCTGGTTATC+TGG + chr4_1:64114914-64114933 None:intergenic 40.0%
!! AACCAGGGGCTATTTTATGA+TGG - chr4_1:64114917-64114936 Msa0563680:intron 40.0%
ATCCATCATAAAATAGCCCC+TGG + chr4_1:64114922-64114941 None:intergenic 40.0%
! GATGGATATAATGGAAGGCA+AGG - chr4_1:64114935-64114954 Msa0563680:intron 40.0%
! TGTCACATCTTTTTCTCGCA+CGG - chr4_1:64115097-64115116 Msa0563680:CDS 40.0%
! TTCTTATTTGCTGCCTTCTG+TGG - chr4_1:64115203-64115222 Msa0563680:CDS 40.0%
GAGATCACTTGAGTTTCGAT+TGG + chr4_1:64115369-64115388 None:intergenic 40.0%
AGTGTTACATGGTTATAGGG+TGG - chr4_1:64115643-64115662 Msa0563680:intron 40.0%
TGAAAAGCTCCTTTCAATCC+TGG + chr4_1:64115836-64115855 None:intergenic 40.0%
TTAGGACCTCTGATTAAACG+AGG - chr4_1:64115885-64115904 Msa0563680:intron 40.0%
GCAACAGGAGTTTACATGAT+TGG + chr4_1:64115970-64115989 None:intergenic 40.0%
GCAGTCCAATGATGTTGAAT+GGG + chr4_1:64116057-64116076 None:intergenic 40.0%
TGCAGTCCAATGATGTTGAA+TGG + chr4_1:64116058-64116077 None:intergenic 40.0%
AAGTGAAATTTAGCGCTGTC+CGG - chr4_1:64116247-64116266 Msa0563680:intron 40.0%
GAAGAGGAGAAAACAAGATC+CGG + chr4_1:64116269-64116288 None:intergenic 40.0%
CATTTCCATCAGGGAAATCA+TGG + chr4_1:64116394-64116413 None:intergenic 40.0%
! AAAAGTGTATACATGCCAGC+AGG - chr4_1:64116431-64116450 Msa0563680:intron 40.0%
GCAATACTTACATTTCCTGC+TGG + chr4_1:64116449-64116468 None:intergenic 40.0%
GGTTCCCTTAATGAAGAAGA+TGG + chr4_1:64116592-64116611 None:intergenic 40.0%
! TTGTCCAGCAATAGTTTTCC+GGG + chr4_1:64116624-64116643 None:intergenic 40.0%
AAAACAGCTGGTAACATGTG+AGG + chr4_1:64116748-64116767 None:intergenic 40.0%
TGAGATAGTGAGAAAACAGC+TGG + chr4_1:64116760-64116779 None:intergenic 40.0%
!! GCTGTTTTCTCACTATCTCA+AGG - chr4_1:64116760-64116779 Msa0563680:intron 40.0%
CATCATGAGATGCTCCAATT+TGG + chr4_1:64116876-64116895 None:intergenic 40.0%
ACAAACCTTTGTAGTCTCAG+AGG + chr4_1:64116971-64116990 None:intergenic 40.0%
ACACTATGATTTCTGACTGG+TGG - chr4_1:64117021-64117040 Msa0563680:CDS 40.0%
TTTGTGCCTATGAGTTACCT+AGG - chr4_1:64117086-64117105 Msa0563680:CDS 40.0%
GATATGTTGCTCATGCTTTG+TGG - chr4_1:64117416-64117435 Msa0563680:CDS 40.0%
!! CGAGCTTTAGGAATCAAATC+AGG + chr4_1:64117527-64117546 None:intergenic 40.0%
TGCATAGCATATCGAGCTTT+AGG + chr4_1:64117539-64117558 None:intergenic 40.0%
TTCAACATCACCAAGCATAC+AGG + chr4_1:64117614-64117633 None:intergenic 40.0%
AGTTCCTGTTGAGCTAATTC+AGG - chr4_1:64117633-64117652 Msa0563680:intron 40.0%
GTTACTCTGTGCATTACTTC+TGG - chr4_1:64117700-64117719 Msa0563680:intron 40.0%
ATGGCTCCATGAATCATCAT+CGG + chr4_1:64117928-64117947 None:intergenic 40.0%
GCTTCTTGAAGAGCTACTAA+AGG - chr4_1:64118001-64118020 Msa0563680:intron 40.0%
GCTACTAAAGGATAAGCTAC+AGG - chr4_1:64118013-64118032 Msa0563680:intron 40.0%
TTCTTTGTCCAAGAAAGAGC+AGG - chr4_1:64118082-64118101 Msa0563680:intron 40.0%
TCTTTGTCCAAGAAAGAGCA+GGG - chr4_1:64118083-64118102 Msa0563680:intron 40.0%
AATAATCCCCTGCTCTTTCT+TGG + chr4_1:64118093-64118112 None:intergenic 40.0%
GGATTATTCACATGGTTGCT+GGG - chr4_1:64118105-64118124 Msa0563680:intron 40.0%
ACAACTGAGAATAGGGTTCA+AGG + chr4_1:64118147-64118166 None:intergenic 40.0%
TTGAACCCTATTCTCAGTTG+TGG - chr4_1:64118146-64118165 Msa0563680:intron 40.0%
TCACACCACAACTGAGAATA+GGG + chr4_1:64118154-64118173 None:intergenic 40.0%
TTCACACCACAACTGAGAAT+AGG + chr4_1:64118155-64118174 None:intergenic 40.0%
CTTGATACGATCATCAGTCT+TGG + chr4_1:64118373-64118392 None:intergenic 40.0%
!!! GCAACCATTTTTTCCCTGTA+TGG + chr4_1:64118497-64118516 None:intergenic 40.0%
GTTGCATCACTTATAGCTTC+TGG - chr4_1:64118512-64118531 Msa0563680:intron 40.0%
! AGCTAAGGTATCTTTGAGTG+AGG + chr4_1:64118783-64118802 None:intergenic 40.0%
! TGTATTTCTGACAGCAGCTA+AGG + chr4_1:64118798-64118817 None:intergenic 40.0%
TGCTGTCAGAAATACAACTC+AGG - chr4_1:64118802-64118821 Msa0563680:CDS 40.0%
CTTGACATAGCATAAAGCTC+TGG + chr4_1:64118944-64118963 None:intergenic 40.0%
ATGTTCACGTGAGTTTCGAA+AGG + chr4_1:64118972-64118991 None:intergenic 40.0%
!!! CTACTTTTTGGCGCAATGAT+AGG + chr4_1:64119054-64119073 None:intergenic 40.0%
ATGTGAGAGGTTACCAAGTT+AGG - chr4_1:64119402-64119421 Msa0563680:intron 40.0%
ATTATGGGCAGTTGGAATCT+TGG - chr4_1:64119439-64119458 Msa0563680:intron 40.0%
! TTTTCGTTAACCTGCATCTC+TGG + chr4_1:64119518-64119537 None:intergenic 40.0%
CCGAAAACAGAAAGTAGATG+TGG - chr4_1:64119565-64119584 Msa0563680:CDS 40.0%
CTTTGACGACTAACTTACCT+TGG + chr4_1:64119684-64119703 None:intergenic 40.0%
! GTTTTGCATGATGCTTCCAT+AGG - chr4_1:64119816-64119835 Msa0563680:intron 40.0%
TGATCATGATGTGGAAGTGA+TGG - chr4_1:64120191-64120210 Msa0563680:five_prime_UTR 40.0%
GTGAACCACATCACTTGACT+TGG - chr4_1:64111990-64112009 Msa0563680:CDS 45.0%
ATCAAGAAGCTCAAAGGAGG+TGG - chr4_1:64112387-64112406 Msa0563680:CDS 45.0%
! TGTTACTTGTTGGCTGTTGC+GGG + chr4_1:64112478-64112497 None:intergenic 45.0%
AGTCTAAGCAAACCGTTGAG+AGG - chr4_1:64112896-64112915 Msa0563680:CDS 45.0%
CCTCTTAACATTAGTTGCCG+CGG + chr4_1:64113230-64113249 None:intergenic 45.0%
TTAAGAGGAGTCCCAGTCAT+GGG - chr4_1:64113242-64113261 Msa0563680:CDS 45.0%
CCATGAAACAACAGCACAAG+TGG + chr4_1:64114045-64114064 None:intergenic 45.0%
!! CCACTTGTGCTGTTGTTTCA+TGG - chr4_1:64114042-64114061 Msa0563680:CDS 45.0%
!! TTGTGCTGTTGTTTCATGGC+AGG - chr4_1:64114046-64114065 Msa0563680:CDS 45.0%
!! TGTGCTGTTGTTTCATGGCA+GGG - chr4_1:64114047-64114066 Msa0563680:CDS 45.0%
! CCTTTCCGAAGTTTTCCTGT+AGG + chr4_1:64114181-64114200 None:intergenic 45.0%
CCTACAGGAAAACTTCGGAA+AGG - chr4_1:64114178-64114197 Msa0563680:intron 45.0%
GCTTCATGCTCGTTGTAGAA+GGG + chr4_1:64114818-64114837 None:intergenic 45.0%
AGCTTCATGCTCGTTGTAGA+AGG + chr4_1:64114819-64114838 None:intergenic 45.0%
TACAACGAGCATGAAGCTAC+CGG - chr4_1:64114821-64114840 Msa0563680:intron 45.0%
! CCCTTGATGATTCTGTGGTT+TGG + chr4_1:64114852-64114871 None:intergenic 45.0%
TCATCAAGGGATGATGTGCA+AGG - chr4_1:64114862-64114881 Msa0563680:intron 45.0%
GAAACCACTCTCTCACAACT+AGG - chr4_1:64115322-64115341 Msa0563680:CDS 45.0%
GTAACCTAGTTGTGAGAGAG+TGG + chr4_1:64115329-64115348 None:intergenic 45.0%
CATGGTTATAGGGTGGTAAG+TGG - chr4_1:64115650-64115669 Msa0563680:intron 45.0%
CATTGCTTAAGCATGAGTCG+TGG + chr4_1:64115762-64115781 None:intergenic 45.0%
CACGACTCATGCTTAAGCAA+TGG - chr4_1:64115760-64115779 Msa0563680:intron 45.0%
GTGACATTGCCAGGATTGAA+AGG - chr4_1:64115824-64115843 Msa0563680:intron 45.0%
AGAGGTCCTAAGCAGAGTTA+CGG + chr4_1:64115876-64115895 None:intergenic 45.0%
TGGCAACTAGTGTGGTGAAA+TGG + chr4_1:64116116-64116135 None:intergenic 45.0%
TTCACCACACTAGTTGCCAA+AGG - chr4_1:64116117-64116136 Msa0563680:intron 45.0%
CAAACCTTTGGCAACTAGTG+TGG + chr4_1:64116124-64116143 None:intergenic 45.0%
CTAGACCATGATTTCCCTGA+TGG - chr4_1:64116386-64116405 Msa0563680:intron 45.0%
! TAGTTTTCCGGGTTCGTAAC+TGG + chr4_1:64116613-64116632 None:intergenic 45.0%
TAACATGTGAGGTGCATCAG+AGG + chr4_1:64116737-64116756 None:intergenic 45.0%
! GAGATGCTCCAATTTGGCTT+TGG + chr4_1:64116870-64116889 None:intergenic 45.0%
! ATTGGAGCATCTCATGATGC+TGG - chr4_1:64116877-64116896 Msa0563680:intron 45.0%
AGAGGAATAACCCCATTCTG+GGG + chr4_1:64116953-64116972 None:intergenic 45.0%
CAGAGGAATAACCCCATTCT+GGG + chr4_1:64116954-64116973 None:intergenic 45.0%
TCAGAGGAATAACCCCATTC+TGG + chr4_1:64116955-64116974 None:intergenic 45.0%
TGCAAGCAATCAGCCTAGAA+AGG + chr4_1:64116995-64117014 None:intergenic 45.0%
CAGGAACCTAGGTAACTCAT+AGG + chr4_1:64117095-64117114 None:intergenic 45.0%
TTGCTCATGCTTTGTGGCTT+TGG - chr4_1:64117422-64117441 Msa0563680:CDS 45.0%
AAGCTCGATATGCTATGCAC+AGG - chr4_1:64117540-64117559 Msa0563680:intron 45.0%
CCATCCTGAATTAGCTCAAC+AGG + chr4_1:64117640-64117659 None:intergenic 45.0%
CCTGTTGAGCTAATTCAGGA+TGG - chr4_1:64117637-64117656 Msa0563680:intron 45.0%
GAAGTTCCATCTCACATTCC+TGG - chr4_1:64117673-64117692 Msa0563680:intron 45.0%
TCCATCTCACATTCCTGGAA+AGG - chr4_1:64117678-64117697 Msa0563680:intron 45.0%
ACCTTTCCAGGAATGTGAGA+TGG + chr4_1:64117682-64117701 None:intergenic 45.0%
ATGCACAGAGTAACCTTTCC+AGG + chr4_1:64117694-64117713 None:intergenic 45.0%
!! CTGTGCATTACTTCTGGAAC+CGG - chr4_1:64117706-64117725 Msa0563680:intron 45.0%
!! TGTGCATTACTTCTGGAACC+GGG - chr4_1:64117707-64117726 Msa0563680:intron 45.0%
CTTCTCTTTCCAATGGAGCA+GGG + chr4_1:64117791-64117810 None:intergenic 45.0%
! TAACAGCTCATCTGGAGTTC+TGG + chr4_1:64117817-64117836 None:intergenic 45.0%
AGAAGGCCGATGATGATTCA+TGG - chr4_1:64117919-64117938 Msa0563680:intron 45.0%
TAAAGGATAAGCTACAGGCG+TGG - chr4_1:64118018-64118037 Msa0563680:intron 45.0%
CTTTGTCCAAGAAAGAGCAG+GGG - chr4_1:64118084-64118103 Msa0563680:intron 45.0%
AGAGCAGGGGATTATTCACA+TGG - chr4_1:64118097-64118116 Msa0563680:intron 45.0%
GGGATTATTCACATGGTTGC+TGG - chr4_1:64118104-64118123 Msa0563680:intron 45.0%
TATTCACATGGTTGCTGGGT+TGG - chr4_1:64118109-64118128 Msa0563680:intron 45.0%
ATTCACATGGTTGCTGGGTT+GGG - chr4_1:64118110-64118129 Msa0563680:intron 45.0%
ATTTCCGTGATGTCAATGGG+TGG - chr4_1:64118180-64118199 Msa0563680:CDS 45.0%
AAAACGTGCAGCCCAATGAA+GGG + chr4_1:64118210-64118229 None:intergenic 45.0%
CCAATTGGATCTTGTGCACT+TGG + chr4_1:64118563-64118582 None:intergenic 45.0%
CCAAGTGCACAAGATCCAAT+TGG - chr4_1:64118560-64118579 Msa0563680:intron 45.0%
! GATGCCGCAGTTTTACCAAT+TGG + chr4_1:64118578-64118597 None:intergenic 45.0%
CCAGTGTAAGAGATGACAGA+TGG + chr4_1:64118664-64118683 None:intergenic 45.0%
CCATCTGTCATCTCTTACAC+TGG - chr4_1:64118661-64118680 Msa0563680:intron 45.0%
TTTGTGTAGGCTCATGTGAG+AGG - chr4_1:64119389-64119408 Msa0563680:intron 45.0%
TGGACAAGGTTGTGCTAAGA+TGG - chr4_1:64119459-64119478 Msa0563680:intron 45.0%
ACAAGGTTGTGCTAAGATGG+CGG - chr4_1:64119462-64119481 Msa0563680:intron 45.0%
! GGAGAAAAGGAGTCGGTTTA+CGG - chr4_1:64119483-64119502 Msa0563680:CDS 45.0%
! GAGAAAAGGAGTCGGTTTAC+GGG - chr4_1:64119484-64119503 Msa0563680:CDS 45.0%
! AGAAAAGGAGTCGGTTTACG+GGG - chr4_1:64119485-64119504 Msa0563680:CDS 45.0%
AGCATCAGGAGATTTGACCA+TGG + chr4_1:64119621-64119640 None:intergenic 45.0%
TGATATTGCTCACGAGCATC+AGG + chr4_1:64119635-64119654 None:intergenic 45.0%
!! TGAGAAGTATCGTCAAGCCA+AGG - chr4_1:64119664-64119683 Msa0563680:intron 45.0%
TTCCGGCATCAACATTCTGT+TGG - chr4_1:64120092-64120111 Msa0563680:intron 45.0%
GACCAACAGAATGTTGATGC+CGG + chr4_1:64120097-64120116 None:intergenic 45.0%
!! AATAAAAAAAAATCAATATA+TGG + chr4_1:64113662-64113681 None:intergenic 5.0%
! TTACTTGTTGGCTGTTGCGG+GGG + chr4_1:64112476-64112495 None:intergenic 50.0%
! GTTACTTGTTGGCTGTTGCG+GGG + chr4_1:64112477-64112496 None:intergenic 50.0%
GGGCGTAAATGTGAAGTCTC+TGG + chr4_1:64112656-64112675 None:intergenic 50.0%
TCCGAAAAGATGGTCATGCC+TGG - chr4_1:64113093-64113112 Msa0563680:CDS 50.0%
! GCCAGGCATGACCATCTTTT+CGG + chr4_1:64113097-64113116 None:intergenic 50.0%
GAAAAGATGGTCATGCCTGG+CGG - chr4_1:64113096-64113115 Msa0563680:CDS 50.0%
! TCCATCTCTTTTCTTCCGCC+AGG + chr4_1:64113114-64113133 None:intergenic 50.0%
CCGCGGCAACTAATGTTAAG+AGG - chr4_1:64113227-64113246 Msa0563680:CDS 50.0%
GTTAAGAGGAGTCCCAGTCA+TGG - chr4_1:64113241-64113260 Msa0563680:CDS 50.0%
AGCAGAACCCTACTTTCCAG+AGG - chr4_1:64113767-64113786 Msa0563680:CDS 50.0%
AGAACCCTACTTTCCAGAGG+CGG - chr4_1:64113770-64113789 Msa0563680:CDS 50.0%
GTACTCACGTGTTGTAGGGA+AGG - chr4_1:64114495-64114514 Msa0563680:intron 50.0%
TTGTAGGGAAGGCTCAGTTC+TGG - chr4_1:64114506-64114525 Msa0563680:intron 50.0%
ACCTGGCACACAATTGTCAC+CGG - chr4_1:64114529-64114548 Msa0563680:intron 50.0%
GGACTATACGCAGAAGAACC+CGG + chr4_1:64114551-64114570 None:intergenic 50.0%
TAAACAACGGACGTTGACCC+TGG + chr4_1:64114602-64114621 None:intergenic 50.0%
! GGACTGGAGAAGCTCTGATT+AGG + chr4_1:64114638-64114657 None:intergenic 50.0%
AATCAGAGCTTCTCCAGTCC+TGG - chr4_1:64114638-64114657 Msa0563680:intron 50.0%
AACTTCTGCAGATCCAGGAC+TGG + chr4_1:64114654-64114673 None:intergenic 50.0%
GAGGTAACTTCTGCAGATCC+AGG + chr4_1:64114659-64114678 None:intergenic 50.0%
! TACTCAAGCTTTGCGCCGAT+TGG - chr4_1:64114748-64114767 Msa0563680:intron 50.0%
AGGGATGATGTGCAAGGAAG+AGG - chr4_1:64114868-64114887 Msa0563680:intron 50.0%
TCTCTCTGGACCAGATAACC+AGG - chr4_1:64114901-64114920 Msa0563680:intron 50.0%
CTCTCTGGACCAGATAACCA+GGG - chr4_1:64114902-64114921 Msa0563680:intron 50.0%
TCTCTGGACCAGATAACCAG+GGG - chr4_1:64114903-64114922 Msa0563680:intron 50.0%
GGTTATAGGGTGGTAAGTGG+TGG - chr4_1:64115653-64115672 Msa0563680:intron 50.0%
GGTGGCATCTGACCTGAATT+AGG - chr4_1:64115671-64115690 Msa0563680:intron 50.0%
AGGTCCTAAGCAGAGTTACG+GGG + chr4_1:64115874-64115893 None:intergenic 50.0%
GAGGTCCTAAGCAGAGTTAC+GGG + chr4_1:64115875-64115894 None:intergenic 50.0%
AAGCTTGTCACTGTCGCAAC+AGG + chr4_1:64115985-64116004 None:intergenic 50.0%
GCGACAGTGACAAGCTTGAA+AGG - chr4_1:64115988-64116007 Msa0563680:intron 50.0%
AAGGGAACCAGTTACGAACC+CGG - chr4_1:64116603-64116622 Msa0563680:intron 50.0%
CGAACCCGGAAAACTATTGC+TGG - chr4_1:64116617-64116636 Msa0563680:intron 50.0%
TTAAGGCAGTCTCCCCAGAA+TGG - chr4_1:64116938-64116957 Msa0563680:intron 50.0%
TAAGGCAGTCTCCCCAGAAT+GGG - chr4_1:64116939-64116958 Msa0563680:intron 50.0%
TCATCCCTCTGATTCTGCCT+GGG - chr4_1:64117588-64117607 Msa0563680:intron 50.0%
TGACTTCACTGCATGACTCC+CGG + chr4_1:64117728-64117747 None:intergenic 50.0%
AGCAGGGTCGGTGAAATTCT+TGG + chr4_1:64117775-64117794 None:intergenic 50.0%
TCTTTCCAATGGAGCAGGGT+CGG + chr4_1:64117787-64117806 None:intergenic 50.0%
GCTTCTCTTTCCAATGGAGC+AGG + chr4_1:64117792-64117811 None:intergenic 50.0%
CTGGTGGCTTCTCTTTCCAA+TGG + chr4_1:64117798-64117817 None:intergenic 50.0%
CGTGGCTTACTTCCAGATCT+CGG - chr4_1:64118036-64118055 Msa0563680:intron 50.0%
GTGGCTTACTTCCAGATCTC+GGG - chr4_1:64118037-64118056 Msa0563680:intron 50.0%
TTCATCTACCTCCCGAGATC+TGG + chr4_1:64118051-64118070 None:intergenic 50.0%
TCGGGAGGTAGATGAAGAGA+CGG - chr4_1:64118055-64118074 Msa0563680:intron 50.0%
!!! TTGCTGGGTTGGGTTTTGAG+TGG - chr4_1:64118120-64118139 Msa0563680:intron 50.0%
!!! TGCTGGGTTGGGTTTTGAGT+GGG - chr4_1:64118121-64118140 Msa0563680:intron 50.0%
CAGTCCACCCATTGACATCA+CGG + chr4_1:64118187-64118206 None:intergenic 50.0%
CAAAACGTGCAGCCCAATGA+AGG + chr4_1:64118211-64118230 None:intergenic 50.0%
! CTTCATTGGGCTGCACGTTT+TGG - chr4_1:64118209-64118228 Msa0563680:CDS 50.0%
!! ATTGGGCTGCACGTTTTGGA+AGG - chr4_1:64118213-64118232 Msa0563680:CDS 50.0%
TCATCAGTCTTGGCAGATGG+TGG + chr4_1:64118363-64118382 None:intergenic 50.0%
CGATCATCAGTCTTGGCAGA+TGG + chr4_1:64118366-64118385 None:intergenic 50.0%
ATAGCTTCTGGTGCATCTGC+TGG - chr4_1:64118524-64118543 Msa0563680:intron 50.0%
! ACTGGCAGGGTATCTTTCTG+AGG - chr4_1:64118625-64118644 Msa0563680:intron 50.0%
ATACAACTCAGGCAGCTGCA+CGG - chr4_1:64118813-64118832 Msa0563680:CDS 50.0%
GGCAGTTGGAATCTTGGACA+AGG - chr4_1:64119445-64119464 Msa0563680:intron 50.0%
!! GTGCTAAGATGGCGGAGAAA+AGG - chr4_1:64119470-64119489 Msa0563680:intron 50.0%
!! AGATGGCGGAGAAAAGGAGT+CGG - chr4_1:64119476-64119495 Msa0563680:CDS 50.0%
GGGTTTCAAACCAGAGATGC+AGG - chr4_1:64119505-64119524 Msa0563680:CDS 50.0%
!! TGTCTCAAGAGTGCTGTCCA+TGG - chr4_1:64119601-64119620 Msa0563680:intron 50.0%
GCCTGGCGGAAGAAAAGAGA+TGG - chr4_1:64113110-64113129 Msa0563680:CDS 55.0%
CTGTAGGAGAAGCCCACGAA+CGG - chr4_1:64113138-64113157 Msa0563680:CDS 55.0%
ATGCACCTTCAGCCGTTCGT+GGG + chr4_1:64113153-64113172 None:intergenic 55.0%
AATGCACCTTCAGCCGTTCG+TGG + chr4_1:64113154-64113173 None:intergenic 55.0%
! AGCTCCGCCTCTGGAAAGTA+GGG + chr4_1:64113777-64113796 None:intergenic 55.0%
! TAGCTCCGCCTCTGGAAAGT+AGG + chr4_1:64113778-64113797 None:intergenic 55.0%
CTTTCCAGAGGCGGAGCTAT+TGG - chr4_1:64113779-64113798 Msa0563680:CDS 55.0%
ACATCCAATAGCTCCGCCTC+TGG + chr4_1:64113786-64113805 None:intergenic 55.0%
CCTGGCACACAATTGTCACC+GGG - chr4_1:64114530-64114549 Msa0563680:intron 55.0%
!! TCAAGCTTTGCGCCGATTGG+AGG - chr4_1:64114751-64114770 Msa0563680:intron 55.0%
ATCTGGTCCAGAGAGAGCTG+CGG + chr4_1:64114897-64114916 None:intergenic 55.0%
GCTCTAGCTGTGACATTGCC+AGG - chr4_1:64115815-64115834 Msa0563680:intron 55.0%
GCTGACACATAGCCTGCTCT+AGG - chr4_1:64116088-64116107 Msa0563680:intron 55.0%
GGTGAAATGGTGCCTAGAGC+AGG + chr4_1:64116103-64116122 None:intergenic 55.0%
TGAGGTGCATCAGAGGTGGA+AGG + chr4_1:64116730-64116749 None:intergenic 55.0%
CATGTGAGGTGCATCAGAGG+TGG + chr4_1:64116734-64116753 None:intergenic 55.0%
AAGGCAGTCTCCCCAGAATG+GGG - chr4_1:64116940-64116959 Msa0563680:intron 55.0%
GTCATCCCTCTGATTCTGCC+TGG - chr4_1:64117587-64117606 Msa0563680:intron 55.0%
ATCACCAAGCATACAGGCCC+AGG + chr4_1:64117608-64117627 None:intergenic 55.0%
TTTCACCGACCCTGCTCCAT+TGG - chr4_1:64117779-64117798 Msa0563680:intron 55.0%
! CAGCTCATCTGGAGTTCTGG+TGG + chr4_1:64117814-64117833 None:intergenic 55.0%
GCTTACTTCCAGATCTCGGG+AGG - chr4_1:64118040-64118059 Msa0563680:intron 55.0%
CGGGAGGTAGATGAAGAGAC+GGG - chr4_1:64118056-64118075 Msa0563680:intron 55.0%
!! ATGGGTGGACTGCCCTTCAT+TGG - chr4_1:64118195-64118214 Msa0563680:CDS 55.0%
!! TGGGTGGACTGCCCTTCATT+GGG - chr4_1:64118196-64118215 Msa0563680:CDS 55.0%
GCATCCATTGCAGCTAGCAG+CGG - chr4_1:64118593-64118612 Msa0563680:intron 55.0%
CATCCATTGCAGCTAGCAGC+GGG - chr4_1:64118594-64118613 Msa0563680:intron 55.0%
AGAAGCCCACGAACGGCTGA+AGG - chr4_1:64113145-64113164 Msa0563680:CDS 60.0%
!! GGAAGGCTCAGTTCTGGACC+TGG - chr4_1:64114512-64114531 Msa0563680:intron 60.0%
CCCGGTGACAATTGTGTGCC+AGG + chr4_1:64114533-64114552 None:intergenic 60.0%
GAGGAATCCGCAGCTCTCTC+TGG - chr4_1:64114887-64114906 Msa0563680:intron 60.0%
CCTAAGCAGAGTTACGGGGC+TGG + chr4_1:64115870-64115889 None:intergenic 60.0%
CCAGCCCCGTAACTCTGCTT+AGG - chr4_1:64115867-64115886 Msa0563680:intron 60.0%
CAGGCCCAGGCAGAATCAGA+GGG + chr4_1:64117595-64117614 None:intergenic 60.0%
ACAGGCCCAGGCAGAATCAG+AGG + chr4_1:64117596-64117615 None:intergenic 60.0%
TCTGCCTGGGCCTGTATGCT+TGG - chr4_1:64117601-64117620 Msa0563680:intron 60.0%
ATGCCCGCTGCTAGCTGCAA+TGG + chr4_1:64118600-64118619 None:intergenic 60.0%
TGCAGCTAGCAGCGGGCATA+AGG - chr4_1:64118601-64118620 Msa0563680:intron 60.0%
GCAGCTAGCAGCGGGCATAA+GGG - chr4_1:64118602-64118621 Msa0563680:intron 60.0%
TAGCAGCGGGCATAAGGGAC+TGG - chr4_1:64118607-64118626 Msa0563680:intron 60.0%
AAGGCTAGCGTTGCTCCCCA+GGG + chr4_1:64120043-64120062 None:intergenic 60.0%
TAAGGCTAGCGTTGCTCCCC+AGG + chr4_1:64120044-64120063 None:intergenic 60.0%
! AGCGGGCATAAGGGACTGGC+AGG - chr4_1:64118611-64118630 Msa0563680:intron 65.0%
! GCGGGCATAAGGGACTGGCA+GGG - chr4_1:64118612-64118631 Msa0563680:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 64111684 64120278 64111684 ID=Msa0563680;Name=Msa0563680
chr4_1 mRNA 64111684 64120278 64111684 ID=Msa0563680-mRNA-1;Parent=Msa0563680;Name=Msa0563680-mRNA-1;_AED=0.03;_eAED=0.03;_QI=171|0.91|0.76|1|1|1|13|242|966
chr4_1 exon 64111684 64112009 64111684 ID=Msa0563680-mRNA-1:exon:20457;Parent=Msa0563680-mRNA-1
chr4_1 exon 64112277 64112564 64112277 ID=Msa0563680-mRNA-1:exon:20456;Parent=Msa0563680-mRNA-1
chr4_1 exon 64112878 64113460 64112878 ID=Msa0563680-mRNA-1:exon:20455;Parent=Msa0563680-mRNA-1
chr4_1 exon 64113728 64114191 64113728 ID=Msa0563680-mRNA-1:exon:20454;Parent=Msa0563680-mRNA-1
chr4_1 exon 64114263 64114400 64114263 ID=Msa0563680-mRNA-1:exon:20453;Parent=Msa0563680-mRNA-1
chr4_1 exon 64114978 64115382 64114978 ID=Msa0563680-mRNA-1:exon:20452;Parent=Msa0563680-mRNA-1
chr4_1 exon 64115505 64115605 64115505 ID=Msa0563680-mRNA-1:exon:20451;Parent=Msa0563680-mRNA-1
chr4_1 exon 64117006 64117450 64117006 ID=Msa0563680-mRNA-1:exon:20450;Parent=Msa0563680-mRNA-1
chr4_1 exon 64117849 64117894 64117849 ID=Msa0563680-mRNA-1:exon:20449;Parent=Msa0563680-mRNA-1
chr4_1 exon 64118150 64118238 64118150 ID=Msa0563680-mRNA-1:exon:20448;Parent=Msa0563680-mRNA-1
chr4_1 exon 64118796 64118911 64118796 ID=Msa0563680-mRNA-1:exon:20447;Parent=Msa0563680-mRNA-1
chr4_1 exon 64119471 64119602 64119471 ID=Msa0563680-mRNA-1:exon:20446;Parent=Msa0563680-mRNA-1
chr4_1 exon 64120098 64120278 64120098 ID=Msa0563680-mRNA-1:exon:20445;Parent=Msa0563680-mRNA-1
chr4_1 five_prime_UTR 64120108 64120278 64120108 ID=Msa0563680-mRNA-1:five_prime_utr;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64120098 64120107 64120098 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64119471 64119602 64119471 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64118796 64118911 64118796 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64118150 64118238 64118150 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64117849 64117894 64117849 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64117006 64117450 64117006 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64115505 64115605 64115505 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64114978 64115382 64114978 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64114263 64114400 64114263 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64113728 64114191 64113728 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64112878 64113460 64112878 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64112277 64112564 64112277 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 CDS 64111926 64112009 64111926 ID=Msa0563680-mRNA-1:cds;Parent=Msa0563680-mRNA-1
chr4_1 three_prime_UTR 64111684 64111925 64111684 ID=Msa0563680-mRNA-1:three_prime_utr;Parent=Msa0563680-mRNA-1
Gene Sequence

>Msa0563680

ATGACATCTGGTTATGAATATGATATCGATGATCTGTATCAAGAAGCTCAAAGGAGGTGGCTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGAAAAGTATCAGTTCACTCAAGAGCCCCCGCAACAGCCAACAAGTGGTTCGCTGTTTCTGTTTAACAGAAGAGTATTACGTTTCTTCCGAAAAGATGGTCATGCCTGGCGGAAGAAAAGAGATGGAAGAGCTGTAGGAGAAGCCCACGAACGGCTGAAGGTTGGAAATGTTGAAGCCATAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGAATCCGGAATTTGACCACATTGTTCTCGTTCATTACAGAGACACAAGTGAGGGAAGGCTCAGTTCTGGACCTGGCACACAATTGTCACCGGGTTCTTCTGCGTATAGTCCGAGTCCTAGCTCATATAGTACTCAGAATCCAGGGTCAACGTCCGTTGTTTATGACGCCTATGAACCTAATCAGAGCTTCTCCAGTCCTGGATCTGCAGAAGTTACCTCTTATAACAATGGAATGACTTACTCAGAAGGAGCAGAAGCAGAATCAGAAACCTCAGCTGACTTTAAGGTTACTCAAGCTTTGCGCCGATTGGAGGTGCAGTTAAGTTTGAATGAGGACAACATTGAAGAAATTGCTCCCTTCTACAACGAGCATGAAGCTACCGGTGATTCCAAACCACAGAATCATCAAGGGATGATGTGCAAGGAAGAGGAATCCGCAGCTCTCTCTGGACCAGATAACCAGGGGCTATTTTATGATGGATATAATGGAAGGCAAGGTGATAGTGGTGAAAGTTATCATGAATTACTAGACCATGATTTCCCTGATGGAAATGAAAAGGCTTTATCATGGAAAAGTGTATACATGCCAGCAGGAAATGAGAGTTCACCATCTTCTTCATTAAGGGAACCAGTTACGAACCCGGAAAACTATTGCTGGACAAATTTCAACACTGATAATGCTGGAAACTGTATGATTTATTTTCACCTTATCAATTTAACAGTTTTTTTTGGCTTATTTTGGGTTCCTTCCACCTCTGATGCACCTCACATGTTACCAGCTGTTTTCTCACTATCTCAAGGTGTTGATGAAGTCACACTTCCTCCATATTCTTCTATGGATGAAACACAAGAAATTCGTTCTAGCTACTATTCGACATTGTTTGACCAAAGCCAAATTGGAGCATCTCATGATGCTGGTTCAAGCTTAACTGTTTCACAAAAACAGAAATTTACTATTAAGGCAGTCTCCCCAGAATGGGGTTATTCCTCTGAGACTACAAAGGTTTTCATTATTGGGTCTTTTCTCTGTCATCCCTCTGATTCTGCCTGGGCCTGTATGCTTGGTGATGTTGAAGTTCCTGTTGAGCTAATTCAGGATGGTGTAATGTGTTGTGAAGTTCCATCTCACATTCCTGGAAAGACCAAGAATTTCACCGACCCTGCTCCATTGGAAAGAGAAGCCACCAGAACTCCAGATGAGCTGTTATTACTTGTTAGATTTGGGCAGATGCTGCTTTCTGAGTCATCTGTAAGTAATGATAACAACGAATCGGGAATTTTCATAAAACAGAAGGCCGATGATGATTCATGGAGCCATATTATAGAGGCTCTACTATTTGGCAGTGAAAATTCTTCTGGTACTATCAATTGGCTTCTTGAAGAGCTACTAAAGGATAAGCTACAGGCGTGGCTTACTTCCAGATCTCGGGAGGTAGATGAAGAGACGGGCTGTTCTTTGTCCAAGAAAGAGCAGGGGATTATTCACATGGTTGCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCTATTCTCAGTTGTGGTGTGAATATAAATTTCCGTGATGTCAATGGGTGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCATCACTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACAAGATCCAATTGGTAAAACTGCGGCATCCATTGCAGCTAGCAGCGGGCATAAGGGACTGGCAGGGTATCTTTCTGAGGTAGCTCTAACAAGCCATCTGTCATCTCTTACACTGGAAGAGAATGAGCTATCTAAAAGTTCTGCGGAGCTTCAAGCAGATTTAACTGTTAGTAATGTCTCCAAGGAAAATATTGCTTTCAGTGAGGATCGGACCTCACTCAAAGATACCTTAGCTGCTGTCAGAAATACAACTCAGGCAGCTGCACGGATACAAGCTGCTTTTCGATCACATTCATTTAGAAAACGGAGAACAAAAGAAACAAATGCTGTTATGAGTGGACATGATATAAGTGCAAGTAGTGTTGGTGACATGCCAGAGCTTTATGCTATGTCAAGACTTGCCTTTCGAAACTCACGTGAACATAACTCAGCTGCATTATCAATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTCCTATCATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGAGGTTACCAAGTTAGGAAGCATTACAAAGTATTATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTAAGATGGCGGAGAAAAGGAGTCGGTTTACGGGGTTTCAAACCAGAGATGCAGGTTAACGAAAATGAAGATGAAGATATTCTCAAAGTGTTCCGAAAACAGAAAGTAGATGTGGAAATTGAAAAGGCTGTCTCAAGAGTGCTGTCCATGGTCAAATCTCCTGATGCTCGTGAGCAATATCATCGCATGCTTGAGAAGTATCGTCAAGCCAAGGCCGAACTTGCACAAACAAGTGAAGAAAAATCGGTAACAACTTCTGTAGAAGATTTTTTAAACATGGATGATGATTTTTATTAA
Protein sequence

>Msa0563680

MTSGYEYDIDDLYQEAQRRWLKPAEVMYILQNHEKYQFTQEPPQQPTSGSLFLFNRRVLRFFRKDGHAWRKKRDGRAVGEAHERLKVGNVEAINCYYAHGEQNPTFQRRSYWMLNPEFDHIVLVHYRDTSEGRLSSGPGTQLSPGSSAYSPSPSSYSTQNPGSTSVVYDAYEPNQSFSSPGSAEVTSYNNGMTYSEGAEAESETSADFKVTQALRRLEVQLSLNEDNIEEIAPFYNEHEATGDSKPQNHQGMMCKEEESAALSGPDNQGLFYDGYNGRQGDSGESYHELLDHDFPDGNEKALSWKSVYMPAGNESSPSSSLREPVTNPENYCWTNFNTDNAGNCMIYFHLINLTVFFGLFWVPSTSDAPHMLPAVFSLSQGVDEVTLPPYSSMDETQEIRSSYYSTLFDQSQIGASHDAGSSLTVSQKQKFTIKAVSPEWGYSSETTKVFIIGSFLCHPSDSAWACMLGDVEVPVELIQDGVMCCEVPSHIPGKTKNFTDPAPLEREATRTPDELLLLVRFGQMLLSESSVSNDNNESGIFIKQKADDDSWSHIIEALLFGSENSSGTINWLLEELLKDKLQAWLTSRSREVDEETGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDVNGWTALHWAARFGREKMVASLIASGASAGAVTDPSAQDPIGKTAASIAASSGHKGLAGYLSEVALTSHLSSLTLEENELSKSSAELQADLTVSNVSKENIAFSEDRTSLKDTLAAVRNTTQAAARIQAAFRSHSFRKRRTKETNAVMSGHDISASSVGDMPELYAMSRLAFRNSREHNSAALSIQKKYRGWKGRKDFLSLRQKVVKIQAHVRGYQVRKHYKVLWAVGILDKVVLRWRRKGVGLRGFKPEMQVNENEDEDILKVFRKQKVDVEIEKAVSRVLSMVKSPDAREQYHRMLEKYRQAKAELAQTSEEKSVTTSVEDFLNMDDDFY*