Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563930 | KEH20640.1 | 77.212 | 373 | 36 | 4 | 1 | 324 | 17 | 389 | 6.74e-174 | 518 |
| Msa0563930 | KEH20640.1 | 77.995 | 409 | 56 | 5 | 315 | 689 | 1 | 409 | 0.0 | 576 |
| Msa0563930 | KEH20640.1 | 83.951 | 81 | 13 | 0 | 758 | 838 | 84 | 164 | 2.13e-31 | 139 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563930 | A0A072U474 | 77.212 | 373 | 36 | 4 | 1 | 324 | 17 | 389 | 3.22e-174 | 518 |
| Msa0563930 | A0A072U474 | 77.995 | 409 | 56 | 5 | 315 | 689 | 1 | 409 | 0.0 | 576 |
| Msa0563930 | A0A072U474 | 83.951 | 81 | 13 | 0 | 758 | 838 | 84 | 164 | 1.02e-31 | 139 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0563930 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563930 | MtrunA17_Chr8g0377801 | 78.005 | 391 | 52 | 5 | 315 | 671 | 1 | 391 | 0.0 | 547 |
| Msa0563930 | MtrunA17_Chr8g0377801 | 77.212 | 373 | 36 | 4 | 1 | 324 | 17 | 389 | 5.69e-178 | 518 |
| Msa0563930 | MtrunA17_Chr8g0377801 | 83.951 | 81 | 13 | 0 | 758 | 838 | 84 | 164 | 1.57e-35 | 139 |
| Msa0563930 | MtrunA17_Chr8g0377781 | 66.313 | 377 | 90 | 6 | 331 | 670 | 1 | 377 | 1.43e-146 | 436 |
| Msa0563930 | MtrunA17_Chr8g0377781 | 65.957 | 376 | 76 | 5 | 1 | 324 | 1 | 376 | 2.90e-146 | 436 |
| Msa0563930 | MtrunA17_Chr8g0377781 | 63.636 | 99 | 34 | 1 | 740 | 838 | 55 | 151 | 2.06e-31 | 127 |
| Msa0563930 | MtrunA17_Chr2g0296711 | 25.839 | 298 | 198 | 6 | 405 | 682 | 104 | 398 | 2.56e-17 | 85.5 |
| Msa0563930 | MtrunA17_Chr2g0296711 | 25.177 | 282 | 172 | 6 | 75 | 319 | 104 | 383 | 5.39e-15 | 78.2 |
| Msa0563930 | MtrunA17_Chr2g0296721 | 25.979 | 281 | 187 | 6 | 405 | 665 | 101 | 380 | 5.20e-17 | 84.3 |
| Msa0563930 | MtrunA17_Chr2g0296721 | 23.607 | 305 | 190 | 7 | 75 | 339 | 101 | 402 | 1.03e-11 | 67.8 |
| Msa0563930 | MtrunA17_Chr2g0286191 | 24.483 | 290 | 176 | 7 | 76 | 330 | 81 | 362 | 9.08e-17 | 83.2 |
| Msa0563930 | MtrunA17_Chr2g0286191 | 26.573 | 286 | 181 | 11 | 406 | 668 | 81 | 360 | 5.81e-15 | 77.4 |
| Msa0563930 | MtrunA17_Chr4g0001831 | 24.823 | 282 | 190 | 5 | 406 | 665 | 87 | 368 | 1.20e-16 | 82.8 |
| Msa0563930 | MtrunA17_Chr4g0001831 | 24.315 | 292 | 178 | 7 | 76 | 329 | 87 | 373 | 1.25e-12 | 70.5 |
| Msa0563930 | MtrunA17_Chr2g0296191 | 27.801 | 241 | 155 | 5 | 443 | 664 | 754 | 994 | 1.46e-16 | 84.7 |
| Msa0563930 | MtrunA17_Chr2g0296191 | 22.835 | 381 | 234 | 8 | 1 | 325 | 137 | 513 | 2.38e-15 | 80.9 |
| Msa0563930 | MtrunA17_Chr2g0296191 | 27.113 | 284 | 166 | 7 | 75 | 319 | 713 | 994 | 6.00e-14 | 76.3 |
| Msa0563930 | MtrunA17_Chr2g0296191 | 23.227 | 409 | 258 | 12 | 316 | 679 | 128 | 525 | 9.51e-14 | 75.5 |
| Msa0563930 | MtrunA17_Chr2g0296191 | 38.835 | 103 | 62 | 1 | 735 | 837 | 188 | 289 | 2.78e-11 | 67.8 |
| Msa0563930 | MtrunA17_Chr2g0315731 | 26.721 | 247 | 148 | 6 | 443 | 664 | 162 | 400 | 1.76e-16 | 82.8 |
| Msa0563930 | MtrunA17_Chr2g0315731 | 23.759 | 282 | 176 | 5 | 75 | 319 | 121 | 400 | 4.53e-13 | 72.4 |
| Msa0563930 | MtrunA17_Chr2g0295761 | 24.852 | 338 | 196 | 11 | 34 | 319 | 55 | 386 | 6.37e-16 | 80.9 |
| Msa0563930 | MtrunA17_Chr2g0295761 | 23.964 | 338 | 214 | 12 | 364 | 664 | 55 | 386 | 1.78e-12 | 70.1 |
| Msa0563930 | MtrunA17_Chr2g0296171 | 26.860 | 242 | 158 | 5 | 443 | 665 | 152 | 393 | 6.68e-16 | 80.9 |
| Msa0563930 | MtrunA17_Chr2g0296171 | 25.614 | 285 | 171 | 6 | 75 | 320 | 111 | 393 | 1.32e-13 | 73.9 |
| Msa0563930 | MtrunA17_Chr2g0296251 | 26.749 | 243 | 155 | 6 | 443 | 665 | 157 | 396 | 1.10e-15 | 80.1 |
| Msa0563930 | MtrunA17_Chr2g0296251 | 25.969 | 258 | 156 | 6 | 98 | 320 | 139 | 396 | 5.31e-13 | 72.0 |
| Msa0563930 | MtrunA17_Chr2g0296221 | 26.033 | 242 | 160 | 5 | 443 | 665 | 171 | 412 | 1.88e-15 | 79.7 |
| Msa0563930 | MtrunA17_Chr2g0296221 | 26.316 | 285 | 169 | 7 | 75 | 320 | 130 | 412 | 5.44e-13 | 72.0 |
| Msa0563930 | MtrunA17_Chr4g0067141 | 25.000 | 340 | 198 | 9 | 34 | 322 | 39 | 372 | 3.68e-15 | 78.2 |
| Msa0563930 | MtrunA17_Chr4g0067141 | 24.118 | 340 | 224 | 7 | 364 | 671 | 39 | 376 | 2.72e-14 | 75.5 |
| Msa0563930 | MtrunA17_Chr2g0296151 | 26.335 | 281 | 167 | 6 | 79 | 323 | 95 | 371 | 2.01e-14 | 76.3 |
| Msa0563930 | MtrunA17_Chr2g0296151 | 27.273 | 242 | 154 | 5 | 442 | 665 | 131 | 368 | 6.40e-13 | 71.6 |
| Msa0563930 | MtrunA17_Chr2g0295731 | 24.483 | 290 | 161 | 9 | 76 | 320 | 99 | 375 | 2.43e-14 | 75.9 |
| Msa0563930 | MtrunA17_Chr2g0295731 | 24.793 | 242 | 158 | 6 | 443 | 665 | 139 | 375 | 4.30e-12 | 68.9 |
| Msa0563930 | MtrunA17_Chr2g0296231 | 25.000 | 244 | 168 | 4 | 436 | 664 | 134 | 377 | 3.01e-14 | 75.9 |
| Msa0563930 | MtrunA17_Chr2g0296291 | 25.610 | 246 | 166 | 4 | 437 | 665 | 151 | 396 | 4.95e-14 | 75.1 |
| Msa0563930 | MtrunA17_Chr2g0296111 | 25.000 | 224 | 154 | 3 | 443 | 653 | 131 | 353 | 1.42e-13 | 73.6 |
| Msa0563930 | MtrunA17_Chr2g0296741 | 23.571 | 280 | 194 | 5 | 405 | 664 | 121 | 400 | 5.60e-13 | 72.0 |
| Msa0563930 | MtrunA17_Chr2g0296741 | 21.927 | 301 | 193 | 6 | 75 | 335 | 121 | 419 | 2.97e-11 | 66.6 |
| Msa0563930 | MtrunA17_Chr4g0067671 | 21.630 | 319 | 216 | 8 | 364 | 652 | 39 | 353 | 1.23e-12 | 70.5 |
| Msa0563930 | MtrunA17_Chr2g0296121 | 24.126 | 286 | 180 | 7 | 79 | 329 | 181 | 464 | 2.07e-11 | 67.4 |
| Msa0563930 | MtrunA17_Chr2g0296701 | 24.260 | 169 | 112 | 4 | 527 | 682 | 3 | 168 | 7.87e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563930 | AT5G64950.1 | 31.742 | 356 | 178 | 8 | 24 | 320 | 27 | 376 | 3.36e-43 | 162 |
| Msa0563930 | AT5G64950.1 | 33.708 | 356 | 186 | 10 | 354 | 665 | 27 | 376 | 4.07e-43 | 162 |
| Msa0563930 | AT5G64950.1 | 41.250 | 80 | 47 | 0 | 759 | 838 | 67 | 146 | 1.79e-12 | 70.5 |
| Msa0563930 | AT5G07900.1 | 22.899 | 345 | 211 | 8 | 30 | 321 | 59 | 401 | 1.47e-20 | 95.5 |
| Msa0563930 | AT5G07900.1 | 23.055 | 347 | 224 | 9 | 360 | 672 | 59 | 396 | 5.51e-19 | 90.9 |
| Msa0563930 | AT5G07900.1 | 33.333 | 132 | 68 | 2 | 728 | 839 | 46 | 177 | 2.40e-11 | 67.0 |
| Msa0563930 | AT1G21150.3 | 22.145 | 289 | 196 | 7 | 406 | 668 | 69 | 354 | 3.69e-12 | 69.3 |
| Msa0563930 | AT1G21150.1 | 22.145 | 289 | 196 | 7 | 406 | 668 | 105 | 390 | 8.53e-12 | 68.6 |
| Msa0563930 | AT1G21150.2 | 22.145 | 289 | 196 | 7 | 406 | 668 | 169 | 454 | 1.22e-11 | 68.2 |
Find 136 sgRNAs with CRISPR-Local
Find 462 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTCAGATTTATGTAATT+TGG | 0.146035 | 4_1:+64383789 | None:intergenic |
| TTCTAATAATCCAAACATTT+TGG | 0.165845 | 4_1:-64380914 | Msa0563930:CDS |
| TTCTAAGAATCCAACCATTT+TGG | 0.178966 | 4_1:-64377168 | Msa0563930:CDS |
| TATGTATCTAAACTTGTTTC+AGG | 0.182146 | 4_1:-64381128 | Msa0563930:CDS |
| TATGTATCTAAACTTGTTTC+AGG | 0.182146 | 4_1:-64383763 | Msa0563930:CDS |
| AGATATAGGTAATTTGATTT+TGG | 0.196435 | 4_1:+64377407 | None:intergenic |
| TCGGTCGAAGATTGATTAAT+TGG | 0.210798 | 4_1:+64381215 | None:intergenic |
| TCGGTCGAAGATTGATTAAT+TGG | 0.210798 | 4_1:+64383850 | None:intergenic |
| AGAGTTCAACTTTAGGTTTA+AGG | 0.220651 | 4_1:+64380980 | None:intergenic |
| GTAATTTGGAATTGGAATTA+AGG | 0.258620 | 4_1:+64383803 | None:intergenic |
| AATTGAATTCTTTCAACAAT+TGG | 0.271513 | 4_1:-64377222 | Msa0563930:CDS |
| AGTTGAACTCTTTCAACAAT+TGG | 0.295692 | 4_1:-64380968 | Msa0563930:CDS |
| AGTTGAACTCTTTCAACAAT+TGG | 0.295692 | 4_1:-64383602 | Msa0563930:CDS |
| AAACTAGCAATCAAAATGTT+TGG | 0.309959 | 4_1:+64383538 | None:intergenic |
| GCTCAAACTAGCAGCCAAAA+TGG | 0.315955 | 4_1:+64377154 | None:intergenic |
| TTGTGGCATTGTTGGAAATC+AGG | 0.322366 | 4_1:-64383374 | Msa0563930:CDS |
| AGATTTATGCAGTTTGGAAT+TGG | 0.324691 | 4_1:+64381160 | None:intergenic |
| AGATTTATGTAATTTGGAAT+TGG | 0.324733 | 4_1:+64383795 | None:intergenic |
| GGTATCAGAGAAGAAATTAA+AGG | 0.326607 | 4_1:-64383107 | Msa0563930:CDS |
| TCTGATACCCGAAGCAAAAC+TGG | 0.327465 | 4_1:+64383121 | None:intergenic |
| GTCATCAGAGAAGAAATTAA+AGG | 0.328654 | 4_1:-64380473 | Msa0563930:CDS |
| AAACTAGCAGCCAAAATGTT+TGG | 0.329288 | 4_1:+64380904 | None:intergenic |
| GCAGTTTGGAATTGGAATTA+AGG | 0.333703 | 4_1:+64381168 | None:intergenic |
| GGATTCAGATTTATGCAGTT+TGG | 0.339376 | 4_1:+64381154 | None:intergenic |
| TGTTGAAAGAGTTCAACTTT+AGG | 0.350113 | 4_1:+64380973 | None:intergenic |
| TGTTGAAAGAGTTCAACTTT+AGG | 0.350113 | 4_1:+64383607 | None:intergenic |
| TTGCATAAGGTTTGTGTAGT+AGG | 0.351463 | 4_1:+64377559 | None:intergenic |
| CGGTCGAAGATTGATTAATT+GGG | 0.352253 | 4_1:+64381216 | None:intergenic |
| CGGTCGAAGATTGATTAATT+GGG | 0.352253 | 4_1:+64383851 | None:intergenic |
| CAGAAAAGAACGAAGTGAAT+TGG | 0.362765 | 4_1:+64383897 | None:intergenic |
| GAGCTTGCAAATGTTCAAAA+AGG | 0.364543 | 4_1:-64383146 | Msa0563930:CDS |
| CAGAAAAGAACGAGGTGAAT+TGG | 0.369136 | 4_1:+64381262 | None:intergenic |
| ATTGAATTCTTTCAACAATT+GGG | 0.373409 | 4_1:-64377221 | Msa0563930:CDS |
| CAAAGTCAGCATTGGTAAAT+CGG | 0.377421 | 4_1:-64383048 | Msa0563930:CDS |
| GTTGAACTCTTTCAACAATT+GGG | 0.392199 | 4_1:-64380967 | Msa0563930:intron |
| GTTGAACTCTTTCAACAATT+GGG | 0.392199 | 4_1:-64383601 | Msa0563930:CDS |
| TTAGAGAGTTGTGGCATTGT+TGG | 0.395694 | 4_1:-64383382 | Msa0563930:CDS |
| CGATTTACCAATGCTGACTT+TGG | 0.400007 | 4_1:+64383049 | None:intergenic |
| AGAAACAGATTGTCTACAAT+TGG | 0.400794 | 4_1:+64379574 | None:intergenic |
| ATGCTATACGTCAAAATCAT+AGG | 0.403328 | 4_1:+64380391 | None:intergenic |
| GAAGCTATTAAGAAAATTGT+AGG | 0.405231 | 4_1:-64377105 | None:intergenic |
| CCCTCAAAATTCAAGAATGT+TGG | 0.411674 | 4_1:-64380626 | Msa0563930:CDS |
| CCCTCAAAATTCAAGAATGT+TGG | 0.411674 | 4_1:-64383260 | Msa0563930:intron |
| AAATAGAGGATTTGAGATAT+AGG | 0.419403 | 4_1:+64377393 | None:intergenic |
| AAGAGAGCCTAACAACTTGC+GGG | 0.428613 | 4_1:+64381295 | None:intergenic |
| AACAAGTTTAGATACATAGA+TGG | 0.430695 | 4_1:+64381133 | None:intergenic |
| AACAAGTTTAGATACATAGA+TGG | 0.430695 | 4_1:+64383768 | None:intergenic |
| ATGCTGTACATCAAAATCAT+AGG | 0.431885 | 4_1:+64383025 | None:intergenic |
| CAATGTTGGCAACAAATAAT+CGG | 0.432441 | 4_1:+64380776 | None:intergenic |
| CAATGTTGGCAACAAATAAT+CGG | 0.432441 | 4_1:+64383410 | None:intergenic |
| TGGTTTCTTGAGTTGAAGAT+TGG | 0.434552 | 4_1:+64377454 | None:intergenic |
| TTGAGTTCTCTGACGAATGA+TGG | 0.439789 | 4_1:+64377283 | None:intergenic |
| GGATCTGGTTCTTGAAATAG+AGG | 0.444675 | 4_1:+64377379 | None:intergenic |
| GAAGAGAGCGTAACAATTTG+AGG | 0.447321 | 4_1:+64377529 | None:intergenic |
| ATGCAATCCCGCAAGTTGTT+AGG | 0.452272 | 4_1:-64381302 | Msa0563930:CDS |
| AAACAGAAAAGTGGTTTCTT+CGG | 0.452911 | 4_1:+64381196 | None:intergenic |
| AAACAGAAAAGTGGTTTCTT+CGG | 0.452911 | 4_1:+64383831 | None:intergenic |
| TTCTTAATAGCTTCCACAGA+TGG | 0.462423 | 4_1:+64377114 | None:intergenic |
| TCTTGGACAGGTTTATATCA+AGG | 0.463019 | 4_1:-64380258 | Msa0563930:intron |
| TTGAGGGATAGCATTGCATA+AGG | 0.463683 | 4_1:+64377546 | None:intergenic |
| AAGGAGGTTAAATAGAAAAG+TGG | 0.482548 | 4_1:+64377434 | None:intergenic |
| CATAACATGTAAACAAAGCT+TGG | 0.482593 | 4_1:+64382932 | None:intergenic |
| TGTTTCCCAAGCTGAAGACT+TGG | 0.484159 | 4_1:-64380653 | Msa0563930:CDS |
| TGTTTCCCAAGCTGAAGACT+TGG | 0.484159 | 4_1:-64383287 | Msa0563930:CDS |
| GATAATATAGTAACAAAGCT+TGG | 0.486973 | 4_1:+64380298 | None:intergenic |
| AGAAAATGAACGAAGTGAGT+TGG | 0.488370 | 4_1:+64377497 | None:intergenic |
| GGCGTTATTGATAGCTTACA+AGG | 0.492019 | 4_1:-64380218 | Msa0563930:CDS |
| TGACTAACCAATGTTGACTT+TGG | 0.495139 | 4_1:+64380415 | None:intergenic |
| GAAACCCAAGTCTTCAGCTT+GGG | 0.496850 | 4_1:+64380648 | None:intergenic |
| GAAACCCAAGTCTTCAGCTT+GGG | 0.496850 | 4_1:+64383282 | None:intergenic |
| GGCATTATTGATAGCTTACA+AGG | 0.500193 | 4_1:-64382852 | Msa0563930:CDS |
| AAGGAGGTTAAACAGAAAAG+TGG | 0.503037 | 4_1:+64381187 | None:intergenic |
| AAGGAGGTTAAACAGAAAAG+TGG | 0.503037 | 4_1:+64383822 | None:intergenic |
| TTGAGTTCTCTGACGAATGA+TGG | 0.508324 | 4_1:+64381028 | None:intergenic |
| TTGAGTTCTCTGACGAATGA+TGG | 0.508324 | 4_1:+64383663 | None:intergenic |
| ATCACAAAATCTATGTAAGA+AGG | 0.510006 | 4_1:-64382957 | Msa0563930:CDS |
| TCAGAGAAGAAATTAAAGGT+TGG | 0.514181 | 4_1:-64383103 | Msa0563930:CDS |
| AAACTAGCAGCCAAAATGGT+TGG | 0.514950 | 4_1:+64377158 | None:intergenic |
| ACTCTCTAAGAAAGCAATGT+TGG | 0.518565 | 4_1:+64380762 | None:intergenic |
| ACTCTCTAAGAAAGCAATGT+TGG | 0.518565 | 4_1:+64383396 | None:intergenic |
| AAGTTATTAAGAAGTTTGTT+CGG | 0.519975 | 4_1:-64383489 | Msa0563930:intron |
| AATTGAGTTCTTCTTACATA+CGG | 0.524691 | 4_1:-64383080 | Msa0563930:CDS |
| GGTCGAAGATTGATTAATTG+GGG | 0.529541 | 4_1:+64381217 | None:intergenic |
| GGTCGAAGATTGATTAATTG+GGG | 0.529541 | 4_1:+64383852 | None:intergenic |
| TGCTAGTTTGAACAAAACAT+TGG | 0.530513 | 4_1:-64383524 | Msa0563930:CDS |
| AAGAGAGCGTAACAATTTGA+GGG | 0.532062 | 4_1:+64377530 | None:intergenic |
| CGAAGTGAGTTGGAATTGAA+AGG | 0.532498 | 4_1:+64377507 | None:intergenic |
| GTTTCCCAAGCTGAAGACTT+GGG | 0.532974 | 4_1:-64380652 | Msa0563930:CDS |
| GTTTCCCAAGCTGAAGACTT+GGG | 0.532974 | 4_1:-64383286 | Msa0563930:CDS |
| TCTTAATAGCTTCCACAGAT+GGG | 0.537474 | 4_1:+64377115 | None:intergenic |
| AAGAGAGCGTAACAACTTGA+GGG | 0.540502 | 4_1:+64383930 | None:intergenic |
| AATAGCTTCCACAGATGGGA+TGG | 0.541781 | 4_1:+64377119 | None:intergenic |
| TTCTTAATAACTTCCACAGA+GGG | 0.545610 | 4_1:+64380865 | None:intergenic |
| ATTGCTTTCTTAGAGAGTTG+TGG | 0.553536 | 4_1:-64380757 | Msa0563930:CDS |
| ATTGCTTTCTTAGAGAGTTG+TGG | 0.553536 | 4_1:-64383391 | Msa0563930:CDS |
| TCAGAGAAGAAATTAAAGGT+TGG | 0.553582 | 4_1:-64380469 | Msa0563930:CDS |
| CAACAAATAATCGGTACTGC+GGG | 0.555134 | 4_1:+64380785 | None:intergenic |
| CAACAAATAATCGGTACTGC+GGG | 0.555134 | 4_1:+64383419 | None:intergenic |
| CGAAGTGAATTGGAACTGAA+AGG | 0.555996 | 4_1:+64383907 | None:intergenic |
| TTCTTAATAACTTCCACAGA+GGG | 0.556624 | 4_1:+64383499 | None:intergenic |
| ATTTGGAATTGGAATTAAGG+AGG | 0.557007 | 4_1:+64383806 | None:intergenic |
| GAAGAGAGCGTAACAACTTG+AGG | 0.557961 | 4_1:+64383929 | None:intergenic |
| AAACTTTAAACAACTGACAA+GGG | 0.559770 | 4_1:+64379546 | None:intergenic |
| GTTTGGAATTGGAATTAAGG+AGG | 0.566065 | 4_1:+64381171 | None:intergenic |
| TGCTAGTTTGAGCAAAACAT+TGG | 0.566082 | 4_1:-64377144 | Msa0563930:CDS |
| ATCACAAAATCTATGTCAGA+AGG | 0.567089 | 4_1:-64380323 | Msa0563930:CDS |
| TGCTAGTTTGAACAAAACAT+TGG | 0.574441 | 4_1:-64380890 | Msa0563930:CDS |
| TAAACTTTAAACAACTGACA+AGG | 0.576638 | 4_1:+64379545 | None:intergenic |
| GAAGAGAGCCTAACAACTTG+CGG | 0.581102 | 4_1:+64381294 | None:intergenic |
| GGAAACCCAAGTCTTCAGCT+TGG | 0.581743 | 4_1:+64380647 | None:intergenic |
| GGAAACCCAAGTCTTCAGCT+TGG | 0.581743 | 4_1:+64383281 | None:intergenic |
| CATTGGTCCCATCCCATCTG+TGG | 0.588066 | 4_1:-64377127 | Msa0563930:CDS |
| AAGTTATTAAGAAATTTGTA+CGG | 0.592503 | 4_1:-64380855 | Msa0563930:CDS |
| CGAGGTGAATTGGAACTGAA+AGG | 0.592840 | 4_1:+64381272 | None:intergenic |
| TTACATGTTATGTTTATCTG+AGG | 0.593715 | 4_1:-64382921 | Msa0563930:CDS |
| TATGCTGCCAAAGTCAACAT+TGG | 0.594063 | 4_1:-64380422 | Msa0563930:CDS |
| ATAGCTTCCACAGATGGGAT+GGG | 0.594478 | 4_1:+64377120 | None:intergenic |
| TAGTTTCTAATACGAGATTG+TGG | 0.601127 | 4_1:+64380676 | None:intergenic |
| TAGTTTCTAATACGAGATTG+TGG | 0.601127 | 4_1:+64383310 | None:intergenic |
| AAGCTATTAAGAAAATTGTA+GGG | 0.601947 | 4_1:-64377104 | None:intergenic |
| TATGCTGCCAAAGTCAGCAT+TGG | 0.609608 | 4_1:-64383056 | Msa0563930:CDS |
| CAAAACATTGGTCCCCTCTG+TGG | 0.612855 | 4_1:-64380878 | Msa0563930:CDS |
| CAAAACATTGGTCCCCTCTG+TGG | 0.612855 | 4_1:-64383512 | Msa0563930:CDS |
| CGTTATTGATAGCTTACAAG+GGG | 0.623170 | 4_1:-64380216 | Msa0563930:CDS |
| AACAACTTGAGGGATTGCAT+TGG | 0.627002 | 4_1:+64383940 | None:intergenic |
| GCAACAAATAATCGGTACTG+CGG | 0.655716 | 4_1:+64380784 | None:intergenic |
| GCAACAAATAATCGGTACTG+CGG | 0.655716 | 4_1:+64383418 | None:intergenic |
| GCGTTATTGATAGCTTACAA+GGG | 0.660753 | 4_1:-64380217 | Msa0563930:CDS |
| CTTCTTAATAACTTCCACAG+AGG | 0.665684 | 4_1:+64383498 | None:intergenic |
| AAAGTTTAAAGAAAATGCAG+AGG | 0.668498 | 4_1:-64382873 | Msa0563930:CDS |
| TTTCTTAATAACTTCCACAG+AGG | 0.674484 | 4_1:+64380864 | None:intergenic |
| GCATTATTGATAGCTTACAA+GGG | 0.683408 | 4_1:-64382851 | Msa0563930:CDS |
| TCTTAATAACTTCCACAGAG+GGG | 0.703925 | 4_1:+64380866 | None:intergenic |
| TCTTAATAACTTCCACAGAG+GGG | 0.711124 | 4_1:+64383500 | None:intergenic |
| AAGGTGTAAAGAAAATGCAG+AGG | 0.716574 | 4_1:-64380239 | Msa0563930:CDS |
| AATGAGCACAGAAAAGAACG+AGG | 0.763123 | 4_1:+64381254 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAATAAAATAAAAAA+GGG | + | chr4_1:64383209-64383228 | None:intergenic | 0.0% |
| !! | ATAAAAAAATAAAATAAAAA+AGG | + | chr4_1:64383210-64383229 | None:intergenic | 0.0% |
| !!! | CATTTGATTTAAAAAATAAA+AGG | - | chr4_1:64379326-64379345 | Msa0563930:intron | 10.0% |
| !!! | ATATATATCTTTTTTTTACA+GGG | + | chr4_1:64379401-64379420 | None:intergenic | 10.0% |
| !!! | AATATATATCTTTTTTTTAC+AGG | + | chr4_1:64379402-64379421 | None:intergenic | 10.0% |
| !!! | TACAATTTTTGTTTATTTTT+GGG | - | chr4_1:64382040-64382059 | Msa0563930:intron | 10.0% |
| !! | TATTTGTAATTTAATAGAGA+CGG | + | chr4_1:64378572-64378591 | None:intergenic | 15.0% |
| !!! | TTTTGAAGGTATTTAAAATA+AGG | - | chr4_1:64378626-64378645 | Msa0563930:intron | 15.0% |
| !!! | AATAAGAAGATTTTTAAGTT+TGG | - | chr4_1:64378667-64378686 | Msa0563930:intron | 15.0% |
| !!! | ATAAGAAGATTTTTAAGTTT+GGG | - | chr4_1:64378668-64378687 | Msa0563930:intron | 15.0% |
| !!! | TCAAAACTTCTAAAATAAAA+AGG | - | chr4_1:64378938-64378957 | Msa0563930:intron | 15.0% |
| !! | GTTACAATATAAGAAATTAT+AGG | - | chr4_1:64379014-64379033 | Msa0563930:intron | 15.0% |
| !! | ATCAAAATAACTACTAAAAT+AGG | - | chr4_1:64379094-64379113 | Msa0563930:intron | 15.0% |
| !! | AACTAACTTTACATTAAAAT+TGG | - | chr4_1:64379524-64379543 | Msa0563930:intron | 15.0% |
| !! | AAGTTATTAAGAAATTTGTA+CGG | - | chr4_1:64380188-64380207 | Msa0563930:intron | 15.0% |
| !! | AAATTATATCTCATAGTAAT+TGG | + | chr4_1:64380967-64380986 | None:intergenic | 15.0% |
| !!! | TTCTGAAATATACTTAATAA+TGG | + | chr4_1:64381074-64381093 | None:intergenic | 15.0% |
| !! | TGAATATCAATAATAACTTT+GGG | + | chr4_1:64381377-64381396 | None:intergenic | 15.0% |
| !! | ATGAATATCAATAATAACTT+TGG | + | chr4_1:64381378-64381397 | None:intergenic | 15.0% |
| !!! | GTACAATTTTTGTTTATTTT+TGG | - | chr4_1:64382039-64382058 | Msa0563930:intron | 15.0% |
| !!! | ACAATTTTTGTTTATTTTTG+GGG | - | chr4_1:64382041-64382060 | Msa0563930:intron | 15.0% |
| !!! | TTTTGAAATATATTTGATAG+TGG | + | chr4_1:64382412-64382431 | None:intergenic | 15.0% |
| !! | CATAAATTTACAACAAAAAA+AGG | + | chr4_1:64382650-64382669 | None:intergenic | 15.0% |
| !!! | CTTTTTTTGTTGTAAATTTA+TGG | - | chr4_1:64382648-64382667 | Msa0563930:intron | 15.0% |
| !! | AGGATATAATAATAAATAGT+GGG | + | chr4_1:64383118-64383137 | None:intergenic | 15.0% |
| !! | TAGGATATAATAATAAATAG+TGG | + | chr4_1:64383119-64383138 | None:intergenic | 15.0% |
| !! | AAATAAAATAAAAAAGGGAT+GGG | + | chr4_1:64383204-64383223 | None:intergenic | 15.0% |
| !! | AAAATAAAATAAAAAAGGGA+TGG | + | chr4_1:64383205-64383224 | None:intergenic | 15.0% |
| !!! | GAATTCAATTTTATGTTTAA+GGG | + | chr4_1:64383811-64383830 | None:intergenic | 15.0% |
| !!! | AGAATTCAATTTTATGTTTA+AGG | + | chr4_1:64383812-64383831 | None:intergenic | 15.0% |
| !!! | AGATTTATGTAATTTGGAAT+TGG | + | chr4_1:64377251-64377270 | None:intergenic | 20.0% |
| !!! | AAAAAGTTGATTACAGATAA+GGG | + | chr4_1:64377325-64377344 | None:intergenic | 20.0% |
| !!! | ATCAACTTTTTCAAACAAAT+TGG | - | chr4_1:64377334-64377353 | Msa0563930:CDS | 20.0% |
| !!! | AAGTTATTAAGAAGTTTGTT+CGG | - | chr4_1:64377554-64377573 | Msa0563930:CDS | 20.0% |
| !!! | AATTGTGTTTTGTATAAATG+TGG | - | chr4_1:64377592-64377611 | Msa0563930:intron | 20.0% |
| !!! | GCTTGTTTTTAAATGTTTTA+TGG | + | chr4_1:64377840-64377859 | None:intergenic | 20.0% |
| !! | AATTTATACCTCATAACAAT+TGG | + | chr4_1:64378334-64378353 | None:intergenic | 20.0% |
| !!! | TTATGAGGTATAAATTTTGA+TGG | - | chr4_1:64378338-64378357 | Msa0563930:intron | 20.0% |
| !! | TACTCAAAAATACTTATGAT+GGG | + | chr4_1:64378506-64378525 | None:intergenic | 20.0% |
| !!! | CTTAAGTGTTTAAATTTTGA+AGG | - | chr4_1:64378612-64378631 | Msa0563930:intron | 20.0% |
| !!! | ACACAAACTAATTTTTATGA+AGG | - | chr4_1:64378757-64378776 | Msa0563930:intron | 20.0% |
| !!! | TATTTTAGAAGTTTTGAACA+AGG | + | chr4_1:64378935-64378954 | None:intergenic | 20.0% |
| !!! | TTTGATTCGATTAATAGATT+TGG | + | chr4_1:64379080-64379099 | None:intergenic | 20.0% |
| !!! | AAAAAGTTGATTACAGATAA+GGG | + | chr4_1:64377325-64377344 | None:intergenic | 20.0% |
| !!! | ATCAACTTTTTCAAACAAAT+TGG | - | chr4_1:64377334-64377353 | Msa0563930:CDS | 20.0% |
| !!! | TTCTAATAATCCAAACATTT+TGG | - | chr4_1:64380129-64380148 | Msa0563930:intron | 20.0% |
| !!! | TACTATATTATCTTTTTCTG+AGG | - | chr4_1:64380756-64380775 | Msa0563930:CDS | 20.0% |
| !! | TTATAAAAATAACGCTACAT+AGG | + | chr4_1:64381010-64381029 | None:intergenic | 20.0% |
| !! | TATACTTAATAATGGCTTAT+CGG | + | chr4_1:64381066-64381085 | None:intergenic | 20.0% |
| !! | GAATATCAATAATAACTTTG+GGG | + | chr4_1:64381376-64381395 | None:intergenic | 20.0% |
| !! | ATAAACAAAAATTGTACAGA+AGG | + | chr4_1:64382036-64382055 | None:intergenic | 20.0% |
| !! | AAAGAAGGTAAATAATAAGA+AGG | + | chr4_1:64382288-64382307 | None:intergenic | 20.0% |
| !! | ATTTCTCAAATACTTATTAC+GGG | + | chr4_1:64382527-64382546 | None:intergenic | 20.0% |
| !! | CATTTCTCAAATACTTATTA+CGG | + | chr4_1:64382528-64382547 | None:intergenic | 20.0% |
| !! | AAGTATTTGAGAAATGATAT+TGG | - | chr4_1:64382532-64382551 | Msa0563930:intron | 20.0% |
| !! | TAAAAAAACAACTTCTAATG+AGG | + | chr4_1:64382807-64382826 | None:intergenic | 20.0% |
| !!! | GTAATTTGATTTTGGAATTA+AGG | + | chr4_1:64383631-64383650 | None:intergenic | 20.0% |
| !!! | AGATATAGGTAATTTGATTT+TGG | + | chr4_1:64383639-64383658 | None:intergenic | 20.0% |
| !! | AATTGAATTCTTTCAACAAT+TGG | - | chr4_1:64383821-64383840 | Msa0563930:CDS | 20.0% |
| !! | ATTGAATTCTTTCAACAATT+GGG | - | chr4_1:64383822-64383841 | Msa0563930:CDS | 20.0% |
| !! | GTAATTTGGAATTGGAATTA+AGG | + | chr4_1:64377243-64377262 | None:intergenic | 25.0% |
| ! | GGATTCAGATTTATGTAATT+TGG | + | chr4_1:64377257-64377276 | None:intergenic | 25.0% |
| ! | AACAAGTTTAGATACATAGA+TGG | + | chr4_1:64377278-64377297 | None:intergenic | 25.0% |
| !! | TATGTATCTAAACTTGTTTC+AGG | - | chr4_1:64377280-64377299 | Msa0563930:CDS | 25.0% |
| !! | GAAAAAGTTGATTACAGATA+AGG | + | chr4_1:64377326-64377345 | None:intergenic | 25.0% |
| !!! | AACTCAAGTACTTTTTTCAA+AGG | - | chr4_1:64377396-64377415 | Msa0563930:CDS | 25.0% |
| ! | AAACTAGCAATCAAAATGTT+TGG | + | chr4_1:64377508-64377527 | None:intergenic | 25.0% |
| !! | TTGATTTTATTCAGCGTTTT+GGG | - | chr4_1:64377860-64377879 | Msa0563930:intron | 25.0% |
| ! | AATTGAGTTCTTCTTACATA+CGG | - | chr4_1:64377963-64377982 | Msa0563930:intron | 25.0% |
| ! | ATCACAAAATCTATGTAAGA+AGG | - | chr4_1:64378086-64378105 | Msa0563930:intron | 25.0% |
| ! | TTACATGTTATGTTTATCTG+AGG | - | chr4_1:64378122-64378141 | Msa0563930:intron | 25.0% |
| !! | TCTGCATTTTCTTTAAACTT+TGG | + | chr4_1:64378171-64378190 | None:intergenic | 25.0% |
| ! | AAAGTTTAAAGAAAATGCAG+AGG | - | chr4_1:64378170-64378189 | Msa0563930:intron | 25.0% |
| !! | TTTTAGCAACAAAAACATGT+AGG | - | chr4_1:64378416-64378435 | Msa0563930:intron | 25.0% |
| ! | GTACTCAAAAATACTTATGA+TGG | + | chr4_1:64378507-64378526 | None:intergenic | 25.0% |
| ! | TTAAAAGACACCTTCATAAA+AGG | + | chr4_1:64378709-64378728 | None:intergenic | 25.0% |
| ! | AAATTATAGGTCATCACTTT+AGG | - | chr4_1:64379027-64379046 | Msa0563930:intron | 25.0% |
| ! | TATTTACACTGTTATGGTTA+AGG | + | chr4_1:64379250-64379269 | None:intergenic | 25.0% |
| ! | TTCAAGTATTTACACTGTTA+TGG | + | chr4_1:64379256-64379275 | None:intergenic | 25.0% |
| ! | AGGAATTCGTTAATATTACA+AGG | + | chr4_1:64379370-64379389 | None:intergenic | 25.0% |
| ! | ACATGAAAATTGTGAAAAAG+TGG | + | chr4_1:64379652-64379671 | None:intergenic | 25.0% |
| ! | AACAAGTTTAGATACATAGA+TGG | + | chr4_1:64377278-64377297 | None:intergenic | 25.0% |
| !! | TATGTATCTAAACTTGTTTC+AGG | - | chr4_1:64377280-64377299 | Msa0563930:CDS | 25.0% |
| !! | GAAAAAGTTGATTACAGATA+AGG | + | chr4_1:64377326-64377345 | None:intergenic | 25.0% |
| !! | ATTCGTGTTTTGTATAAATG+TGG | - | chr4_1:64380226-64380245 | Msa0563930:CDS | 25.0% |
| !!! | GCTTGTTTTGAAATGTTTTA+TGG | + | chr4_1:64380474-64380493 | None:intergenic | 25.0% |
| !! | TTGATTTTATTCAGCGTTTT+GGG | - | chr4_1:64377860-64377879 | Msa0563930:intron | 25.0% |
| ! | GATAATATAGTAACAAAGCT+TGG | + | chr4_1:64380748-64380767 | None:intergenic | 25.0% |
| ! | ATATCTCATAGTAATTGGAA+AGG | + | chr4_1:64380962-64380981 | None:intergenic | 25.0% |
| ! | GACTCAAAAATACTTAAGAT+GGG | + | chr4_1:64381182-64381201 | None:intergenic | 25.0% |
| !! | CATTTCCTTCACAATAATTT+TGG | - | chr4_1:64381244-64381263 | Msa0563930:CDS | 25.0% |
| ! | TATTGCCAAAATTATTGTGA+AGG | + | chr4_1:64381252-64381271 | None:intergenic | 25.0% |
| !!! | ACAATAATTTTGGCAATACA+GGG | - | chr4_1:64381254-64381273 | Msa0563930:CDS | 25.0% |
| ! | GTGGACCATTATAAAAATAA+CGG | - | chr4_1:64381276-64381295 | Msa0563930:CDS | 25.0% |
| ! | AAACTTTAAACAACTGACAA+GGG | + | chr4_1:64381500-64381519 | None:intergenic | 25.0% |
| ! | TAAACTTTAAACAACTGACA+AGG | + | chr4_1:64381501-64381520 | None:intergenic | 25.0% |
| ! | AAGCCATAAATACTTATGAT+GGG | + | chr4_1:64381749-64381768 | None:intergenic | 25.0% |
| ! | GCATATTTGTATCTAATTTG+TGG | - | chr4_1:64381878-64381897 | Msa0563930:intron | 25.0% |
| ! | AAAATCAACATACATCAGTT+GGG | + | chr4_1:64381995-64382014 | None:intergenic | 25.0% |
| ! | AAAAATCAACATACATCAGT+TGG | + | chr4_1:64381996-64382015 | None:intergenic | 25.0% |
| !!! | GATGTATGTTGATTTTTAAG+TGG | - | chr4_1:64381999-64382018 | Msa0563930:intron | 25.0% |
| ! | ATGTAAGATGGAGTTTATAA+GGG | - | chr4_1:64382079-64382098 | Msa0563930:intron | 25.0% |
| !! | ATTTCAAAATGACTTGTGTA+TGG | - | chr4_1:64382133-64382152 | Msa0563930:intron | 25.0% |
| !! | ATAGTAAAGAGTGCAAAATA+GGG | + | chr4_1:64382215-64382234 | None:intergenic | 25.0% |
| !! | TATAGTAAAGAGTGCAAAAT+AGG | + | chr4_1:64382216-64382235 | None:intergenic | 25.0% |
| !! | TATAGAAGCTAGGAAATTTT+GGG | - | chr4_1:64382232-64382251 | Msa0563930:intron | 25.0% |
| ! | AATCTATATCTCATAGCAAT+TGG | + | chr4_1:64382311-64382330 | None:intergenic | 25.0% |
| !! | CTATGAGATATAGATTTTGA+TGG | - | chr4_1:64382315-64382334 | Msa0563930:intron | 25.0% |
| ! | TGAATATATAGAAGATAGCT+AGG | + | chr4_1:64382353-64382372 | None:intergenic | 25.0% |
| ! | ACAGAAATCAAAACAATAGA+GGG | + | chr4_1:64382617-64382636 | None:intergenic | 25.0% |
| ! | TCACTAAATCCTTTATCATT+TGG | - | chr4_1:64382858-64382877 | Msa0563930:CDS | 25.0% |
| ! | CACTAAATCCTTTATCATTT+GGG | - | chr4_1:64382859-64382878 | Msa0563930:CDS | 25.0% |
| ! | AAAACCAACATCACAAAATT+TGG | - | chr4_1:64382969-64382988 | Msa0563930:intron | 25.0% |
| ! | AAAAAGAGGACACATAATAA+AGG | + | chr4_1:64383389-64383408 | None:intergenic | 25.0% |
| !!! | ATTTGATTTTGGAATTAAGG+AGG | + | chr4_1:64383628-64383647 | None:intergenic | 25.0% |
| !! | AAATAGAGGATTTGAGATAT+AGG | + | chr4_1:64383653-64383672 | None:intergenic | 25.0% |
| ! | AAAAAGTTGAGAACAGATAA+GGG | + | chr4_1:64383705-64383724 | None:intergenic | 25.0% |
| AAACAGAAAAGTGGTTTCTT+CGG | + | chr4_1:64377215-64377234 | None:intergenic | 30.0% | |
| ! | ATTTGGAATTGGAATTAAGG+AGG | + | chr4_1:64377240-64377259 | None:intergenic | 30.0% |
| TGTTGAAAGAGTTCAACTTT+AGG | + | chr4_1:64377439-64377458 | None:intergenic | 30.0% | |
| AGTTGAACTCTTTCAACAAT+TGG | - | chr4_1:64377441-64377460 | Msa0563930:CDS | 30.0% | |
| GTTGAACTCTTTCAACAATT+GGG | - | chr4_1:64377442-64377461 | Msa0563930:CDS | 30.0% | |
| ! | TTTCAACAATTGGGTTTTCA+GGG | - | chr4_1:64377451-64377470 | Msa0563930:CDS | 30.0% |
| ! | TGCTAGTTTGAACAAAACAT+TGG | - | chr4_1:64377519-64377538 | Msa0563930:CDS | 30.0% |
| TTCTTAATAACTTCCACAGA+GGG | + | chr4_1:64377547-64377566 | None:intergenic | 30.0% | |
| CAATGTTGGCAACAAATAAT+CGG | + | chr4_1:64377636-64377655 | None:intergenic | 30.0% | |
| TAGTTTCTAATACGAGATTG+TGG | + | chr4_1:64377736-64377755 | None:intergenic | 30.0% | |
| ! | CCAACATTCTTGAATTTTGA+GGG | + | chr4_1:64377786-64377805 | None:intergenic | 30.0% |
| ! | ACCAACATTCTTGAATTTTG+AGG | + | chr4_1:64377787-64377806 | None:intergenic | 30.0% |
| ! | CTTGATTTTATTCAGCGTTT+TGG | - | chr4_1:64377859-64377878 | Msa0563930:intron | 30.0% |
| GGTATCAGAGAAGAAATTAA+AGG | - | chr4_1:64377936-64377955 | Msa0563930:intron | 30.0% | |
| TCAGAGAAGAAATTAAAGGT+TGG | - | chr4_1:64377940-64377959 | Msa0563930:intron | 30.0% | |
| ATGCTGTACATCAAAATCAT+AGG | + | chr4_1:64378021-64378040 | None:intergenic | 30.0% | |
| !! | TATGATTTTGATGTACAGCA+TGG | - | chr4_1:64378020-64378039 | Msa0563930:intron | 30.0% |
| CATAACATGTAAACAAAGCT+TGG | + | chr4_1:64378114-64378133 | None:intergenic | 30.0% | |
| ! | GCATTATTGATAGCTTACAA+GGG | - | chr4_1:64378192-64378211 | Msa0563930:intron | 30.0% |
| !! | ATGAAGCTTTAGGAAATTTG+AGG | - | chr4_1:64378270-64378289 | Msa0563930:intron | 30.0% |
| !! | TGAAGCTTTAGGAAATTTGA+GGG | - | chr4_1:64378271-64378290 | Msa0563930:intron | 30.0% |
| ATACCTCATAACAATTGGAA+AGG | + | chr4_1:64378329-64378348 | None:intergenic | 30.0% | |
| AAAGCATATAGAAGATAGCT+AGG | + | chr4_1:64378380-64378399 | None:intergenic | 30.0% | |
| ! | CTAGAATACACCTTTTATGA+AGG | - | chr4_1:64378696-64378715 | Msa0563930:intron | 30.0% |
| GCAAAGTTGTAACTAAAAAG+TGG | - | chr4_1:64378789-64378808 | Msa0563930:intron | 30.0% | |
| ! | TGAAGATGTCTTTTAGCAAT+GGG | + | chr4_1:64378833-64378852 | None:intergenic | 30.0% |
| ! | ATGAAGATGTCTTTTAGCAA+TGG | + | chr4_1:64378834-64378853 | None:intergenic | 30.0% |
| ATTGCTAAAAGACATCTTCA+TGG | - | chr4_1:64378833-64378852 | Msa0563930:intron | 30.0% | |
| TTGCTAAAAGACATCTTCAT+GGG | - | chr4_1:64378834-64378853 | Msa0563930:intron | 30.0% | |
| TATCTAATCTATAGCAAGTG+TGG | + | chr4_1:64378903-64378922 | None:intergenic | 30.0% | |
| AATATTACAAGGACGAAAAG+AGG | + | chr4_1:64379359-64379378 | None:intergenic | 30.0% | |
| !!! | TTTTTTACAGGGACTAAAAC+AGG | + | chr4_1:64379390-64379409 | None:intergenic | 30.0% |
| ! | AAGAAATTGTGGTGGAAAAA+TGG | + | chr4_1:64379595-64379614 | None:intergenic | 30.0% |
| TGATTGCTATGAAGAAATTG+TGG | + | chr4_1:64379606-64379625 | None:intergenic | 30.0% | |
| CAATTTCTTCATAGCAATCA+AGG | - | chr4_1:64379606-64379625 | Msa0563930:intron | 30.0% | |
| AAACAGAAAAGTGGTTTCTT+CGG | + | chr4_1:64377215-64377234 | None:intergenic | 30.0% | |
| ! | AGATTTATGCAGTTTGGAAT+TGG | + | chr4_1:64379886-64379905 | None:intergenic | 30.0% |
| ! | AACTCAAGTACTCTTTTCAA+AGG | - | chr4_1:64380031-64380050 | Msa0563930:intron | 30.0% |
| ! | AGAGTTCAACTTTAGGTTTA+AGG | + | chr4_1:64377432-64377451 | None:intergenic | 30.0% |
| TGTTGAAAGAGTTCAACTTT+AGG | + | chr4_1:64377439-64377458 | None:intergenic | 30.0% | |
| AGTTGAACTCTTTCAACAAT+TGG | - | chr4_1:64377441-64377460 | Msa0563930:CDS | 30.0% | |
| GTTGAACTCTTTCAACAATT+GGG | - | chr4_1:64377442-64377461 | Msa0563930:CDS | 30.0% | |
| ! | TTTCAACAATTGGGTTTTCA+GGG | - | chr4_1:64377451-64377470 | Msa0563930:CDS | 30.0% |
| ! | TGCTAGTTTGAACAAAACAT+TGG | - | chr4_1:64377519-64377538 | Msa0563930:CDS | 30.0% |
| TTCTTAATAACTTCCACAGA+GGG | + | chr4_1:64377547-64377566 | None:intergenic | 30.0% | |
| TTTCTTAATAACTTCCACAG+AGG | + | chr4_1:64380182-64380201 | None:intergenic | 30.0% | |
| CAATGTTGGCAACAAATAAT+CGG | + | chr4_1:64377636-64377655 | None:intergenic | 30.0% | |
| TAGTTTCTAATACGAGATTG+TGG | + | chr4_1:64377736-64377755 | None:intergenic | 30.0% | |
| ! | CCAACATTCTTGAATTTTGA+GGG | + | chr4_1:64377786-64377805 | None:intergenic | 30.0% |
| ! | ACCAACATTCTTGAATTTTG+AGG | + | chr4_1:64377787-64377806 | None:intergenic | 30.0% |
| ! | CTTGATTTTATTCAGCGTTT+TGG | - | chr4_1:64377859-64377878 | Msa0563930:intron | 30.0% |
| GTCATCAGAGAAGAAATTAA+AGG | - | chr4_1:64380570-64380589 | Msa0563930:CDS | 30.0% | |
| TCAGAGAAGAAATTAAAGGT+TGG | - | chr4_1:64377940-64377959 | Msa0563930:intron | 30.0% | |
| ATGCTATACGTCAAAATCAT+AGG | + | chr4_1:64380655-64380674 | None:intergenic | 30.0% | |
| !! | TATGATTTTGACGTATAGCA+TGG | - | chr4_1:64380654-64380673 | Msa0563930:CDS | 30.0% |
| ATCACAAAATCTATGTCAGA+AGG | - | chr4_1:64380720-64380739 | Msa0563930:CDS | 30.0% | |
| ! | TTTTCTTTTCACGAAGCTTT+AGG | - | chr4_1:64380894-64380913 | Msa0563930:CDS | 30.0% |
| AAAAATAACGCTACATAGGA+AGG | + | chr4_1:64381006-64381025 | None:intergenic | 30.0% | |
| TAGCAACAAAAACATGTATG+AGG | - | chr4_1:64381109-64381128 | Msa0563930:CDS | 30.0% | |
| CGACTCAAAAATACTTAAGA+TGG | + | chr4_1:64381183-64381202 | None:intergenic | 30.0% | |
| !! | CACAATAATTTTGGCAATAC+AGG | - | chr4_1:64381253-64381272 | Msa0563930:CDS | 30.0% |
| !!! | AGTCGCCGTTATTTTTATAA+TGG | + | chr4_1:64381284-64381303 | None:intergenic | 30.0% |
| !! | CTTTGGGGTTAAGTATTATT+AGG | + | chr4_1:64381361-64381380 | None:intergenic | 30.0% |
| AGAAACAGATTGTCTACAAT+TGG | + | chr4_1:64381472-64381491 | None:intergenic | 30.0% | |
| ! | TTTTTGCATTTTACGAAACC+TGG | - | chr4_1:64381640-64381659 | Msa0563930:intron | 30.0% |
| AAGCCCATCATAAGTATTTA+TGG | - | chr4_1:64381743-64381762 | Msa0563930:intron | 30.0% | |
| CAAGCCATAAATACTTATGA+TGG | + | chr4_1:64381750-64381769 | None:intergenic | 30.0% | |
| ! | CAGTTCTTTTAGATGTAAGA+TGG | - | chr4_1:64382067-64382086 | Msa0563930:intron | 30.0% |
| GATGTAAGATGGAGTTTATA+AGG | - | chr4_1:64382078-64382097 | Msa0563930:intron | 30.0% | |
| ! | CTATAGAAGCTAGGAAATTT+TGG | - | chr4_1:64382231-64382250 | Msa0563930:intron | 30.0% |
| TATATAGAAGATAGCTAGGT+AGG | + | chr4_1:64382349-64382368 | None:intergenic | 30.0% | |
| !! | TATATTTGATAGTGGCTTGT+TGG | + | chr4_1:64382404-64382423 | None:intergenic | 30.0% |
| TGTGGAAAATGGTGATTTAA+AGG | + | chr4_1:64382500-64382519 | None:intergenic | 30.0% | |
| AGAAAGTTGTCACAACAAAA+TGG | + | chr4_1:64382563-64382582 | None:intergenic | 30.0% | |
| CACAGAAATCAAAACAATAG+AGG | + | chr4_1:64382618-64382637 | None:intergenic | 30.0% | |
| !!! | GTCAAGTCATTTTGAAATTC+GGG | + | chr4_1:64382771-64382790 | None:intergenic | 30.0% |
| !!! | GGTCAAGTCATTTTGAAATT+CGG | + | chr4_1:64382772-64382791 | None:intergenic | 30.0% |
| GAAATCGAACTTGTCAAATT+GGG | + | chr4_1:64382907-64382926 | None:intergenic | 30.0% | |
| ! | AAAGCATCATTTGTGATCTT+GGG | + | chr4_1:64382939-64382958 | None:intergenic | 30.0% |
| TAATAGTGTCAATACGACTT+AGG | + | chr4_1:64383138-64383157 | None:intergenic | 30.0% | |
| ! | TAATGAGGGGATTTTATAAC+AGG | + | chr4_1:64383424-64383443 | None:intergenic | 30.0% |
| AAGGAGGTTAAATAGAAAAG+TGG | + | chr4_1:64383612-64383631 | None:intergenic | 30.0% | |
| GAAAAAGTTGAGAACAGATA+AGG | + | chr4_1:64383706-64383725 | None:intergenic | 30.0% | |
| !!! | CTCAACTTTTTCAAACAAAC+TGG | - | chr4_1:64383714-64383733 | Msa0563930:intron | 30.0% |
| ! | TTTCAACAATTGGGTTTTCA+GGG | - | chr4_1:64377451-64377470 | Msa0563930:CDS | 30.0% |
| !! | TTCTAAGAATCCAACCATTT+TGG | - | chr4_1:64383875-64383894 | Msa0563930:CDS | 30.0% |
| CAGAAAAGAACGAAGTGAAT+TGG | + | chr4_1:64377149-64377168 | None:intergenic | 35.0% | |
| GGTCGAAGATTGATTAATTG+GGG | + | chr4_1:64377194-64377213 | None:intergenic | 35.0% | |
| CGGTCGAAGATTGATTAATT+GGG | + | chr4_1:64377195-64377214 | None:intergenic | 35.0% | |
| TCGGTCGAAGATTGATTAAT+TGG | + | chr4_1:64377196-64377215 | None:intergenic | 35.0% | |
| AAGGAGGTTAAACAGAAAAG+TGG | + | chr4_1:64377224-64377243 | None:intergenic | 35.0% | |
| ! | TTACAGATAAGGGCTTTTCA+GGG | + | chr4_1:64377315-64377334 | None:intergenic | 35.0% |
| ! | ATTACAGATAAGGGCTTTTC+AGG | + | chr4_1:64377316-64377335 | None:intergenic | 35.0% |
| ! | CTTTCAACAATTGGGTTTTC+AGG | - | chr4_1:64377450-64377469 | Msa0563930:CDS | 35.0% |
| TCTTAATAACTTCCACAGAG+GGG | + | chr4_1:64377546-64377565 | None:intergenic | 35.0% | |
| CTTCTTAATAACTTCCACAG+AGG | + | chr4_1:64377548-64377567 | None:intergenic | 35.0% | |
| ! | GTGTTTTGTATAAATGTGGC+TGG | - | chr4_1:64377596-64377615 | Msa0563930:intron | 35.0% |
| ! | ACTCTCTAAGAAAGCAATGT+TGG | + | chr4_1:64377650-64377669 | None:intergenic | 35.0% |
| ATTGCTTTCTTAGAGAGTTG+TGG | - | chr4_1:64377652-64377671 | Msa0563930:intron | 35.0% | |
| CCCTCAAAATTCAAGAATGT+TGG | - | chr4_1:64377783-64377802 | Msa0563930:intron | 35.0% | |
| GAGCTTGCAAATGTTCAAAA+AGG | - | chr4_1:64377897-64377916 | Msa0563930:intron | 35.0% | |
| !! | CAAAGTCAGCATTGGTAAAT+CGG | - | chr4_1:64377995-64378014 | Msa0563930:intron | 35.0% |
| AGCTGAAAAACTCTAAATCG+AGG | + | chr4_1:64378060-64378079 | None:intergenic | 35.0% | |
| ! | GGCATTATTGATAGCTTACA+AGG | - | chr4_1:64378191-64378210 | Msa0563930:intron | 35.0% |
| TCTTCTCTACATGAAGCTTT+AGG | - | chr4_1:64378260-64378279 | Msa0563930:intron | 35.0% | |
| CATATAGAAGATAGCTAGGT+AGG | + | chr4_1:64378376-64378395 | None:intergenic | 35.0% | |
| TAGCAACAAAAACATGTAGG+AGG | - | chr4_1:64378419-64378438 | Msa0563930:intron | 35.0% | |
| TGGATAAGGCGATTAGAAAA+TGG | + | chr4_1:64378477-64378496 | None:intergenic | 35.0% | |
| !!! | ATACTTATGATGGGCTTTTG+TGG | + | chr4_1:64378497-64378516 | None:intergenic | 35.0% |
| ! | TCTAACACACCCTTTTCATT+GGG | + | chr4_1:64378532-64378551 | None:intergenic | 35.0% |
| TTTAATAGAGACGGATGCTA+GGG | + | chr4_1:64378563-64378582 | None:intergenic | 35.0% | |
| ATTTAATAGAGACGGATGCT+AGG | + | chr4_1:64378564-64378583 | None:intergenic | 35.0% | |
| ! | GTAGTAGTGGGAAACTTAAA+GGG | + | chr4_1:64378875-64378894 | None:intergenic | 35.0% |
| TACACTTTGTTGCAAGATGT+TGG | + | chr4_1:64379133-64379152 | None:intergenic | 35.0% | |
| ACACTGTTATGGTTAAGGTA+TGG | + | chr4_1:64379245-64379264 | None:intergenic | 35.0% | |
| TGGAAGAATCTGCAATTACA+GGG | + | chr4_1:64379429-64379448 | None:intergenic | 35.0% | |
| ! | ATTGCAGATTCTTCCACTTT+TGG | - | chr4_1:64379433-64379452 | Msa0563930:intron | 35.0% |
| AAAAATGGATGAACAAGCGT+AGG | + | chr4_1:64379580-64379599 | None:intergenic | 35.0% | |
| TTGCTATGAAGAAATTGTGG+TGG | + | chr4_1:64379603-64379622 | None:intergenic | 35.0% | |
| ! | TTGCATCACGTTTTTGTAGT+AGG | + | chr4_1:64379722-64379741 | None:intergenic | 35.0% |
| GGTCGAAGATTGATTAATTG+GGG | + | chr4_1:64377194-64377213 | None:intergenic | 35.0% | |
| CGGTCGAAGATTGATTAATT+GGG | + | chr4_1:64377195-64377214 | None:intergenic | 35.0% | |
| TCGGTCGAAGATTGATTAAT+TGG | + | chr4_1:64377196-64377215 | None:intergenic | 35.0% | |
| AAGGAGGTTAAACAGAAAAG+TGG | + | chr4_1:64377224-64377243 | None:intergenic | 35.0% | |
| ! | GTTTGGAATTGGAATTAAGG+AGG | + | chr4_1:64379875-64379894 | None:intergenic | 35.0% |
| ! | GCAGTTTGGAATTGGAATTA+AGG | + | chr4_1:64379878-64379897 | None:intergenic | 35.0% |
| GGATTCAGATTTATGCAGTT+TGG | + | chr4_1:64379892-64379911 | None:intergenic | 35.0% | |
| ! | TTACAGATAAGGGCTTTTCA+GGG | + | chr4_1:64377315-64377334 | None:intergenic | 35.0% |
| ! | ATTACAGATAAGGGCTTTTC+AGG | + | chr4_1:64377316-64377335 | None:intergenic | 35.0% |
| ! | CTTTCAACAATTGGGTTTTC+AGG | - | chr4_1:64377450-64377469 | Msa0563930:CDS | 35.0% |
| AAACTAGCAGCCAAAATGTT+TGG | + | chr4_1:64380142-64380161 | None:intergenic | 35.0% | |
| TCTTAATAACTTCCACAGAG+GGG | + | chr4_1:64377546-64377565 | None:intergenic | 35.0% | |
| ! | GTGTTTTGTATAAATGTGGC+TGG | - | chr4_1:64377596-64377615 | Msa0563930:intron | 35.0% |
| ! | ACTCTCTAAGAAAGCAATGT+TGG | + | chr4_1:64377650-64377669 | None:intergenic | 35.0% |
| ATTGCTTTCTTAGAGAGTTG+TGG | - | chr4_1:64377652-64377671 | Msa0563930:intron | 35.0% | |
| CCCTCAAAATTCAAGAATGT+TGG | - | chr4_1:64377783-64377802 | Msa0563930:intron | 35.0% | |
| GAGCTTGCAAATGTTCAAAA+AGG | - | chr4_1:64377897-64377916 | Msa0563930:intron | 35.0% | |
| !! | TGACTAACCAATGTTGACTT+TGG | + | chr4_1:64380631-64380650 | None:intergenic | 35.0% |
| AGCTGAAAAACTCTAAATCG+AGG | + | chr4_1:64378060-64378079 | None:intergenic | 35.0% | |
| !! | TTTTTCTGAGGACAAGTTCT+TGG | - | chr4_1:64380768-64380787 | Msa0563930:CDS | 35.0% |
| TCTTGGACAGGTTTATATCA+AGG | - | chr4_1:64380785-64380804 | Msa0563930:CDS | 35.0% | |
| AAGGTGTAAAGAAAATGCAG+AGG | - | chr4_1:64380804-64380823 | Msa0563930:CDS | 35.0% | |
| ! | GCGTTATTGATAGCTTACAA+GGG | - | chr4_1:64380826-64380845 | Msa0563930:CDS | 35.0% |
| ! | CGTTATTGATAGCTTACAAG+GGG | - | chr4_1:64380827-64380846 | Msa0563930:CDS | 35.0% |
| TTTGGGGATCAAAACTTTGT+TGG | - | chr4_1:64380920-64380939 | Msa0563930:CDS | 35.0% | |
| TCTCATAGTAATTGGAAAGG+AGG | + | chr4_1:64380959-64380978 | None:intergenic | 35.0% | |
| !! | ATACTTAAGATGGGCTTTTG+TGG | + | chr4_1:64381173-64381192 | None:intergenic | 35.0% |
| ACTCATCATTCTTCCCTTTA+TGG | - | chr4_1:64381204-64381223 | Msa0563930:CDS | 35.0% | |
| GAAATGCAATGAGTATGCTT+GGG | + | chr4_1:64381230-64381249 | None:intergenic | 35.0% | |
| !! | ATAATTTTGGCAATACAGGG+TGG | - | chr4_1:64381257-64381276 | Msa0563930:CDS | 35.0% |
| ACTATTATGGAATTGGAGCT+GGG | + | chr4_1:64381593-64381612 | None:intergenic | 35.0% | |
| AACTATTATGGAATTGGAGC+TGG | + | chr4_1:64381594-64381613 | None:intergenic | 35.0% | |
| CTCCAATTCCATAATAGTTC+TGG | - | chr4_1:64381595-64381614 | Msa0563930:intron | 35.0% | |
| AGCCAGAACTATTATGGAAT+TGG | + | chr4_1:64381600-64381619 | None:intergenic | 35.0% | |
| TTTGTCAGCCAGAACTATTA+TGG | + | chr4_1:64381606-64381625 | None:intergenic | 35.0% | |
| ! | CATTTTACGAAACCTGGTTT+TGG | - | chr4_1:64381646-64381665 | Msa0563930:intron | 35.0% |
| TAGATGTCAAAACCAAAACC+AGG | + | chr4_1:64381661-64381680 | None:intergenic | 35.0% | |
| !!! | TGATGGGCTTTTGAATCAAA+GGG | + | chr4_1:64381733-64381752 | None:intergenic | 35.0% |
| !!! | ATGATGGGCTTTTGAATCAA+AGG | + | chr4_1:64381734-64381753 | None:intergenic | 35.0% |
| AGAATGTTTCACAAACCAGA+CGG | + | chr4_1:64381846-64381865 | None:intergenic | 35.0% | |
| TACAAATATGCAACGAGTGT+AGG | + | chr4_1:64381869-64381888 | None:intergenic | 35.0% | |
| AACGAAAGGAAGGATATTGA+GGG | - | chr4_1:64381927-64381946 | Msa0563930:intron | 35.0% | |
| TCATTATGCATCTTGAAGCT+CGG | + | chr4_1:64382182-64382201 | None:intergenic | 35.0% | |
| CACTCTTTACTATAGAAGCT+AGG | - | chr4_1:64382222-64382241 | Msa0563930:intron | 35.0% | |
| TCTCATAGCAATTGGAAAGA+AGG | + | chr4_1:64382303-64382322 | None:intergenic | 35.0% | |
| ATACTTATTACGGGCATTTG+TGG | + | chr4_1:64382518-64382537 | None:intergenic | 35.0% | |
| ! | CGATTTGTGTGACAACTTTT+GGG | + | chr4_1:64382678-64382697 | None:intergenic | 35.0% |
| ! | ACGATTTGTGTGACAACTTT+TGG | + | chr4_1:64382679-64382698 | None:intergenic | 35.0% |
| !! | AACCTCCAAGTATTTTTGAG+TGG | - | chr4_1:64382741-64382760 | Msa0563930:intron | 35.0% |
| TACCACTCAAAAATACTTGG+AGG | + | chr4_1:64382746-64382765 | None:intergenic | 35.0% | |
| GTGTACCACTCAAAAATACT+TGG | + | chr4_1:64382749-64382768 | None:intergenic | 35.0% | |
| ATTTCAAAATGACTTGACCG+TGG | - | chr4_1:64382773-64382792 | Msa0563930:intron | 35.0% | |
| TTTCAAAATGACTTGACCGT+GGG | - | chr4_1:64382774-64382793 | Msa0563930:intron | 35.0% | |
| CGAAATCGAACTTGTCAAAT+TGG | + | chr4_1:64382908-64382927 | None:intergenic | 35.0% | |
| !! | GAAAGCATCATTTGTGATCT+TGG | + | chr4_1:64382940-64382959 | None:intergenic | 35.0% |
| ! | GTGTCCAAATTTTGTGATGT+TGG | + | chr4_1:64382976-64382995 | None:intergenic | 35.0% |
| TTACTAGCGACAAACAAATG+CGG | - | chr4_1:64383051-64383070 | Msa0563930:CDS | 35.0% | |
| AGTGGGAATAGTTAAAGAAG+TGG | + | chr4_1:64383101-64383120 | None:intergenic | 35.0% | |
| ! | GGTTTGAAATCACGAAAAAG+AGG | + | chr4_1:64383403-64383422 | None:intergenic | 35.0% |
| TTGCATAAGGTTTGTGTAGT+AGG | + | chr4_1:64383487-64383506 | None:intergenic | 35.0% | |
| ! | AAGAGAGCGTAACAATTTGA+GGG | + | chr4_1:64383516-64383535 | None:intergenic | 35.0% |
| AGAAAATGAACGAAGTGAGT+TGG | + | chr4_1:64383549-64383568 | None:intergenic | 35.0% | |
| !!! | AGTTGAAGATTGGTTTTCTG+GGG | + | chr4_1:64383582-64383601 | None:intergenic | 35.0% |
| !!! | GAGTTGAAGATTGGTTTTCT+GGG | + | chr4_1:64383583-64383602 | None:intergenic | 35.0% |
| !!! | TGAGTTGAAGATTGGTTTTC+TGG | + | chr4_1:64383584-64383603 | None:intergenic | 35.0% |
| !! | TGGTTTCTTGAGTTGAAGAT+TGG | + | chr4_1:64383592-64383611 | None:intergenic | 35.0% |
| ! | CTTTCAACAATTGGGTTTTC+AGG | - | chr4_1:64377450-64377469 | Msa0563930:CDS | 35.0% |
| ! | TGCTAGTTTGAGCAAAACAT+TGG | - | chr4_1:64383899-64383918 | Msa0563930:CDS | 35.0% |
| TCTTAATAGCTTCCACAGAT+GGG | + | chr4_1:64383931-64383950 | None:intergenic | 35.0% | |
| TTCTTAATAGCTTCCACAGA+TGG | + | chr4_1:64383932-64383951 | None:intergenic | 35.0% | |
| ! | AAGAGAGCGTAACAACTTGA+GGG | + | chr4_1:64377116-64377135 | None:intergenic | 40.0% |
| CGAAGTGAATTGGAACTGAA+AGG | + | chr4_1:64377139-64377158 | None:intergenic | 40.0% | |
| ! | TACAGATAAGGGCTTTTCAG+GGG | + | chr4_1:64377314-64377333 | None:intergenic | 40.0% |
| TTGAGTTCTCTGACGAATGA+TGG | + | chr4_1:64377383-64377402 | None:intergenic | 40.0% | |
| !! | GGTTTTCAGGGTTCTCAATT+AGG | - | chr4_1:64377463-64377482 | Msa0563930:CDS | 40.0% |
| CAACAAATAATCGGTACTGC+GGG | + | chr4_1:64377627-64377646 | None:intergenic | 40.0% | |
| GCAACAAATAATCGGTACTG+CGG | + | chr4_1:64377628-64377647 | None:intergenic | 40.0% | |
| TTAGAGAGTTGTGGCATTGT+TGG | - | chr4_1:64377661-64377680 | Msa0563930:intron | 40.0% | |
| TTGTGGCATTGTTGGAAATC+AGG | - | chr4_1:64377669-64377688 | Msa0563930:intron | 40.0% | |
| ! | AAAAGGCTCCAGTTTTGCTT+CGG | - | chr4_1:64377914-64377933 | Msa0563930:intron | 40.0% |
| !! | CGATTTACCAATGCTGACTT+TGG | + | chr4_1:64377997-64378016 | None:intergenic | 40.0% |
| !! | GATTTTGATGTACAGCATGG+AGG | - | chr4_1:64378023-64378042 | Msa0563930:intron | 40.0% |
| TTGAGGGATCACAACTTTGA+TGG | - | chr4_1:64378287-64378306 | Msa0563930:intron | 40.0% | |
| !! | CACAACTTTGATGGTGCTTA+TGG | - | chr4_1:64378296-64378315 | Msa0563930:intron | 40.0% |
| CCTCATAACAATTGGAAAGG+AGG | + | chr4_1:64378326-64378345 | None:intergenic | 40.0% | |
| CCTCCTTTCCAATTGTTATG+AGG | - | chr4_1:64378323-64378342 | Msa0563930:intron | 40.0% | |
| TAGAAGATAGCTAGGTAGGA+AGG | + | chr4_1:64378372-64378391 | None:intergenic | 40.0% | |
| !!! | ATGATGGGCTTTTGTGGATA+AGG | + | chr4_1:64378491-64378510 | None:intergenic | 40.0% |
| TTGAGTACACCCCAATGAAA+AGG | - | chr4_1:64378519-64378538 | Msa0563930:intron | 40.0% | |
| TGAGTACACCCCAATGAAAA+GGG | - | chr4_1:64378520-64378539 | Msa0563930:intron | 40.0% | |
| ! | CTAACACACCCTTTTCATTG+GGG | + | chr4_1:64378531-64378550 | None:intergenic | 40.0% |
| ! | CTCTAACACACCCTTTTCAT+TGG | + | chr4_1:64378533-64378552 | None:intergenic | 40.0% |
| AAAGTGGAAATCACACCTTG+AGG | - | chr4_1:64378805-64378824 | Msa0563930:intron | 40.0% | |
| CTAAAAGACATCTTCATGGG+TGG | - | chr4_1:64378837-64378856 | Msa0563930:intron | 40.0% | |
| ! | GGTAGTAGTGGGAAACTTAA+AGG | + | chr4_1:64378876-64378895 | None:intergenic | 40.0% |
| ATCTATAGCAAGTGTGGAGT+TGG | + | chr4_1:64378897-64378916 | None:intergenic | 40.0% | |
| CTTTGTTGCAAGATGTTGGT+TGG | + | chr4_1:64379129-64379148 | None:intergenic | 40.0% | |
| ATGGTTAAGGTATGGTTCGT+TGG | + | chr4_1:64379237-64379256 | None:intergenic | 40.0% | |
| GTGGAAGAATCTGCAATTAC+AGG | + | chr4_1:64379430-64379449 | None:intergenic | 40.0% | |
| ! | ATTGCTGTTGTCACATGCAA+AGG | + | chr4_1:64379491-64379510 | None:intergenic | 40.0% |
| ! | CACGTTTTTGTAGTAGGACT+AGG | + | chr4_1:64379716-64379735 | None:intergenic | 40.0% |
| CAGAAAAGAACGAGGTGAAT+TGG | + | chr4_1:64379784-64379803 | None:intergenic | 40.0% | |
| AATGAGCACAGAAAAGAACG+AGG | + | chr4_1:64379792-64379811 | None:intergenic | 40.0% | |
| ! | TACAGATAAGGGCTTTTCAG+GGG | + | chr4_1:64377314-64377333 | None:intergenic | 40.0% |
| TTGAGTTCTCTGACGAATGA+TGG | + | chr4_1:64377383-64377402 | None:intergenic | 40.0% | |
| !! | GGTTTTCAGGGTTCTCAATT+AGG | - | chr4_1:64377463-64377482 | Msa0563930:CDS | 40.0% |
| CAACAAATAATCGGTACTGC+GGG | + | chr4_1:64377627-64377646 | None:intergenic | 40.0% | |
| GCAACAAATAATCGGTACTG+CGG | + | chr4_1:64377628-64377647 | None:intergenic | 40.0% | |
| TTAGAGAGTTGTGGCATTGT+TGG | - | chr4_1:64377661-64377680 | Msa0563930:intron | 40.0% | |
| TTGTGGCATTGTTGGAAATC+AGG | - | chr4_1:64377669-64377688 | Msa0563930:intron | 40.0% | |
| AAAAGGTTCCAGCTTTGCTT+AGG | - | chr4_1:64380548-64380567 | Msa0563930:CDS | 40.0% | |
| TATGCTGCCAAAGTCAACAT+TGG | - | chr4_1:64380621-64380640 | Msa0563930:CDS | 40.0% | |
| !! | GATTTTGACGTATAGCATGG+AGG | - | chr4_1:64380657-64380676 | Msa0563930:CDS | 40.0% |
| ! | GGCGTTATTGATAGCTTACA+AGG | - | chr4_1:64380825-64380844 | Msa0563930:CDS | 40.0% |
| !! | TCACGAAGCTTTAGGCAATT+TGG | - | chr4_1:64380902-64380921 | Msa0563930:CDS | 40.0% |
| !! | CACGAAGCTTTAGGCAATTT+GGG | - | chr4_1:64380903-64380922 | Msa0563930:CDS | 40.0% |
| !! | ACGAAGCTTTAGGCAATTTG+GGG | - | chr4_1:64380904-64380923 | Msa0563930:CDS | 40.0% |
| !! | AAGATGGGCTTTTGTGGAAA+TGG | + | chr4_1:64381167-64381186 | None:intergenic | 40.0% |
| GGAAATGCAATGAGTATGCT+TGG | + | chr4_1:64381231-64381250 | None:intergenic | 40.0% | |
| TGGAGCAAAGTCTGTCAAAT+TGG | + | chr4_1:64381452-64381471 | None:intergenic | 40.0% | |
| TTGCTCCACTTGTGAATTCT+TGG | - | chr4_1:64381548-64381567 | Msa0563930:intron | 40.0% | |
| TTCGTCCAAGAATTCACAAG+TGG | + | chr4_1:64381556-64381575 | None:intergenic | 40.0% | |
| AATTGGAGCTGGGATGATAA+AGG | + | chr4_1:64381583-64381602 | None:intergenic | 40.0% | |
| CATAGAGTTTGTAAAGCACG+CGG | + | chr4_1:64381698-64381717 | None:intergenic | 40.0% | |
| GAATGTTTCACAAACCAGAC+GGG | + | chr4_1:64381845-64381864 | None:intergenic | 40.0% | |
| GAACGAAAGGAAGGATATTG+AGG | - | chr4_1:64381926-64381945 | Msa0563930:intron | 40.0% | |
| CATTATGCATCTTGAAGCTC+GGG | + | chr4_1:64382181-64382200 | None:intergenic | 40.0% | |
| TAGCAACAAGAACTTGTACG+AGG | - | chr4_1:64382446-64382465 | Msa0563930:intron | 40.0% | |
| TTACGGGCATTTGTGGAAAA+TGG | + | chr4_1:64382511-64382530 | None:intergenic | 40.0% | |
| CTAATGAGGAACATTTCCCA+CGG | + | chr4_1:64382793-64382812 | None:intergenic | 40.0% | |
| CTACTTGGCCCAAATGATAA+AGG | + | chr4_1:64382870-64382889 | None:intergenic | 40.0% | |
| CTTTATCATTTGGGCCAAGT+AGG | - | chr4_1:64382868-64382887 | Msa0563930:CDS | 40.0% | |
| !!! | TGATGTTGGTTTTGCATGAG+TGG | + | chr4_1:64382962-64382981 | None:intergenic | 40.0% |
| TTGCGTGCATGAATAATGAG+GGG | + | chr4_1:64383437-64383456 | None:intergenic | 40.0% | |
| GTTGCGTGCATGAATAATGA+GGG | + | chr4_1:64383438-64383457 | None:intergenic | 40.0% | |
| TGTTGCGTGCATGAATAATG+AGG | + | chr4_1:64383439-64383458 | None:intergenic | 40.0% | |
| TTGAGGGATAGCATTGCATA+AGG | + | chr4_1:64383500-64383519 | None:intergenic | 40.0% | |
| ! | GAAGAGAGCGTAACAATTTG+AGG | + | chr4_1:64383517-64383536 | None:intergenic | 40.0% |
| ! | CGAAGTGAGTTGGAATTGAA+AGG | + | chr4_1:64383539-64383558 | None:intergenic | 40.0% |
| !! | GGATCTGGTTCTTGAAATAG+AGG | + | chr4_1:64383667-64383686 | None:intergenic | 40.0% |
| ! | AGAACAGATAAGGGCTTTTC+AGG | + | chr4_1:64383696-64383715 | None:intergenic | 40.0% |
| TTGAGTTCTCTGACGAATGA+TGG | + | chr4_1:64377383-64377402 | None:intergenic | 40.0% | |
| !! | GGTTTTCAGGGTTCTCAATT+AGG | - | chr4_1:64377463-64377482 | Msa0563930:CDS | 40.0% |
| AAACTAGCAGCCAAAATGGT+TGG | + | chr4_1:64383888-64383907 | None:intergenic | 40.0% | |
| ! | GAAGAGAGCGTAACAACTTG+AGG | + | chr4_1:64377117-64377136 | None:intergenic | 45.0% |
| TGTTTCCCAAGCTGAAGACT+TGG | - | chr4_1:64377756-64377775 | Msa0563930:intron | 45.0% | |
| GTTTCCCAAGCTGAAGACTT+GGG | - | chr4_1:64377757-64377776 | Msa0563930:intron | 45.0% | |
| GAAACCCAAGTCTTCAGCTT+GGG | + | chr4_1:64377764-64377783 | None:intergenic | 45.0% | |
| ! | AAAGGCTCCAGTTTTGCTTC+GGG | - | chr4_1:64377915-64377934 | Msa0563930:intron | 45.0% |
| TCTGATACCCGAAGCAAAAC+TGG | + | chr4_1:64377925-64377944 | None:intergenic | 45.0% | |
| TATGCTGCCAAAGTCAGCAT+TGG | - | chr4_1:64377987-64378006 | Msa0563930:intron | 45.0% | |
| ! | TTTTAGCAATGGGCACCTCA+AGG | + | chr4_1:64378823-64378842 | None:intergenic | 45.0% |
| !! | AGTGTGGAGTTGGTAGTAGT+GGG | + | chr4_1:64378887-64378906 | None:intergenic | 45.0% |
| !! | AAGTGTGGAGTTGGTAGTAG+TGG | + | chr4_1:64378888-64378907 | None:intergenic | 45.0% |
| GTGAAATGAGGGACCAAAAG+TGG | + | chr4_1:64379449-64379468 | None:intergenic | 45.0% | |
| ATGCAATCCCGCAAGTTGTT+AGG | - | chr4_1:64379741-64379760 | Msa0563930:intron | 45.0% | |
| AAGAGAGCCTAACAACTTGC+GGG | + | chr4_1:64379751-64379770 | None:intergenic | 45.0% | |
| GAAGAGAGCCTAACAACTTG+CGG | + | chr4_1:64379752-64379771 | None:intergenic | 45.0% | |
| CGAGGTGAATTGGAACTGAA+AGG | + | chr4_1:64379774-64379793 | None:intergenic | 45.0% | |
| TGTTTCCCAAGCTGAAGACT+TGG | - | chr4_1:64377756-64377775 | Msa0563930:intron | 45.0% | |
| GTTTCCCAAGCTGAAGACTT+GGG | - | chr4_1:64377757-64377776 | Msa0563930:intron | 45.0% | |
| GAAACCCAAGTCTTCAGCTT+GGG | + | chr4_1:64377764-64377783 | None:intergenic | 45.0% | |
| TCTGATGACCTAAGCAAAGC+TGG | + | chr4_1:64380559-64380578 | None:intergenic | 45.0% | |
| GAGTATGCTTGGGCCATAAA+GGG | + | chr4_1:64381220-64381239 | None:intergenic | 45.0% | |
| TGAGTATGCTTGGGCCATAA+AGG | + | chr4_1:64381221-64381240 | None:intergenic | 45.0% | |
| CGGCGACTAGTGTATAAACA+AGG | - | chr4_1:64381296-64381315 | Msa0563930:CDS | 45.0% | |
| AGGAGACAAGCTAATCGAGT+GGG | + | chr4_1:64381341-64381360 | None:intergenic | 45.0% | |
| TAGGAGACAAGCTAATCGAG+TGG | + | chr4_1:64381342-64381361 | None:intergenic | 45.0% | |
| ATTCACAAGTGGAGCAAGCA+AGG | + | chr4_1:64381545-64381564 | None:intergenic | 45.0% | |
| CGCGTGCTTTACAAACTCTA+TGG | - | chr4_1:64381696-64381715 | Msa0563930:intron | 45.0% | |
| TGAAGCTCGGGCAAAAACTA+GGG | + | chr4_1:64382169-64382188 | None:intergenic | 45.0% | |
| TTGAAGCTCGGGCAAAAACT+AGG | + | chr4_1:64382170-64382189 | None:intergenic | 45.0% | |
| !! | GGCTTGTTGGTTTGCAAACT+GGG | + | chr4_1:64382391-64382410 | None:intergenic | 45.0% |
| !! | TGGCTTGTTGGTTTGCAAAC+TGG | + | chr4_1:64382392-64382411 | None:intergenic | 45.0% |
| ATCATTTGGGCCAAGTAGGT+CGG | - | chr4_1:64382872-64382891 | Msa0563930:CDS | 45.0% | |
| GTTCAACATTCCGACCTACT+TGG | + | chr4_1:64382885-64382904 | None:intergenic | 45.0% | |
| TTGGACACATTATTGCAGCG+TGG | - | chr4_1:64382988-64383007 | Msa0563930:intron | 45.0% | |
| TCTCCACTTTCTCAAACTCC+TGG | - | chr4_1:64383021-64383040 | Msa0563930:CDS | 45.0% | |
| CTCCACTTTCTCAAACTCCT+GGG | - | chr4_1:64383022-64383041 | Msa0563930:CDS | 45.0% | |
| AACCCAGGAGTTTGAGAAAG+TGG | + | chr4_1:64383027-64383046 | None:intergenic | 45.0% | |
| !! | GTGTGTGGATTGGACTTTGT+GGG | + | chr4_1:64383279-64383298 | None:intergenic | 45.0% |
| GAGTCTCTCAACACTATGCA+AGG | + | chr4_1:64383315-64383334 | None:intergenic | 45.0% | |
| ATGAGAAAGCAGCACAAGGT+GGG | + | chr4_1:64383360-64383379 | None:intergenic | 45.0% | |
| TGAGATGAGAAAGCAGCACA+AGG | + | chr4_1:64383364-64383383 | None:intergenic | 45.0% | |
| !!! | AGATAAGGGCTTTTCAGGTG+AGG | + | chr4_1:64383691-64383710 | None:intergenic | 45.0% |
| GCTCAAACTAGCAGCCAAAA+TGG | + | chr4_1:64383892-64383911 | None:intergenic | 45.0% | |
| ATAGCTTCCACAGATGGGAT+GGG | + | chr4_1:64383926-64383945 | None:intergenic | 45.0% | |
| AATAGCTTCCACAGATGGGA+TGG | + | chr4_1:64383927-64383946 | None:intergenic | 45.0% | |
| !!! | ATTTGATTTAAAAAATAAAA+GGG | - | chr4_1:64379327-64379346 | Msa0563930:intron | 5.0% |
| !!! | TTTCTAAAAATAAAAAATAT+TGG | - | chr4_1:64382714-64382733 | Msa0563930:intron | 5.0% |
| CAAAACATTGGTCCCCTCTG+TGG | - | chr4_1:64377531-64377550 | Msa0563930:CDS | 50.0% | |
| GGAAACCCAAGTCTTCAGCT+TGG | + | chr4_1:64377765-64377784 | None:intergenic | 50.0% | |
| CTGCTGACGTGGTGAAATGA+GGG | + | chr4_1:64379460-64379479 | None:intergenic | 50.0% | |
| TCTGCTGACGTGGTGAAATG+AGG | + | chr4_1:64379461-64379480 | None:intergenic | 50.0% | |
| CCAGCACGATGCTTGTGTAA+CGG | + | chr4_1:64379552-64379571 | None:intergenic | 50.0% | |
| CAAAACATTGGTCCCCTCTG+TGG | - | chr4_1:64377531-64377550 | Msa0563930:CDS | 50.0% | |
| GGAAACCCAAGTCTTCAGCT+TGG | + | chr4_1:64377765-64377784 | None:intergenic | 50.0% | |
| CTGAGGACAAGTTCTTGGAC+AGG | - | chr4_1:64380773-64380792 | Msa0563930:CDS | 50.0% | |
| CAGTTGCGCGATAGAACGAA+AGG | - | chr4_1:64381913-64381932 | Msa0563930:intron | 50.0% | |
| TGCGCGATAGAACGAAAGGA+AGG | - | chr4_1:64381917-64381936 | Msa0563930:intron | 50.0% | |
| AGGATATTGAGGGCTGCAGT+TGG | - | chr4_1:64381937-64381956 | Msa0563930:intron | 50.0% | |
| GACACATTATTGCAGCGTGG+CGG | - | chr4_1:64382991-64383010 | Msa0563930:intron | 50.0% | |
| GTCGCTAGTAAACTCAACCC+AGG | + | chr4_1:64383042-64383061 | None:intergenic | 50.0% | |
| GATTGGACTTTGTGGGTGGA+TGG | + | chr4_1:64383272-64383291 | None:intergenic | 50.0% | |
| !! | TGTGGATTGGACTTTGTGGG+TGG | + | chr4_1:64383276-64383295 | None:intergenic | 50.0% |
| !! | CGTGTGTGGATTGGACTTTG+TGG | + | chr4_1:64383280-64383299 | None:intergenic | 50.0% |
| TGAGAAAGCAGCACAAGGTG+GGG | + | chr4_1:64383359-64383378 | None:intergenic | 50.0% | |
| GATGAGAAAGCAGCACAAGG+TGG | + | chr4_1:64383361-64383380 | None:intergenic | 50.0% | |
| !!! | CTTTTCAGGTGAGGTGGATC+TGG | + | chr4_1:64383682-64383701 | None:intergenic | 50.0% |
| !!! | TAAGGGCTTTTCAGGTGAGG+TGG | + | chr4_1:64383688-64383707 | None:intergenic | 50.0% |
| AGGCTGTGATTCTGCTGACG+TGG | + | chr4_1:64379471-64379490 | None:intergenic | 55.0% | |
| ! | CCGTTACACAAGCATCGTGC+TGG | - | chr4_1:64379549-64379568 | Msa0563930:intron | 55.0% |
| TTTGTAAAGCACGCGGCAGG+AGG | + | chr4_1:64381691-64381710 | None:intergenic | 55.0% | |
| GAGTTTGTAAAGCACGCGGC+AGG | + | chr4_1:64381694-64381713 | None:intergenic | 55.0% | |
| TTCACAAACCAGACGGGTCG+CGG | + | chr4_1:64381839-64381858 | None:intergenic | 55.0% | |
| AGAAAGCAGCACAAGGTGGG+GGG | + | chr4_1:64383357-64383376 | None:intergenic | 55.0% | |
| GAGAAAGCAGCACAAGGTGG+GGG | + | chr4_1:64383358-64383377 | None:intergenic | 55.0% | |
| CATTGGTCCCATCCCATCTG+TGG | - | chr4_1:64383916-64383935 | Msa0563930:CDS | 55.0% | |
| AGTGGAGCAAGCAAGGCAGC+AGG | + | chr4_1:64381538-64381557 | None:intergenic | 60.0% | |
| TTCATTTGCCGCGACCCGTC+TGG | - | chr4_1:64381828-64381847 | Msa0563930:intron | 60.0% | |
| TGCGTCGTGCGTGTGTGGAT+TGG | + | chr4_1:64383289-64383308 | None:intergenic | 60.0% | |
| GGTCTTGCGTCGTGCGTGTG+TGG | + | chr4_1:64383294-64383313 | None:intergenic | 65.0% | |
| AGCACAAGGTGGGGGGAGGA+GGG | + | chr4_1:64383350-64383369 | None:intergenic | 65.0% | |
| AAGCAGCACAAGGTGGGGGG+AGG | + | chr4_1:64383354-64383373 | None:intergenic | 65.0% | |
| CAGCACAAGGTGGGGGGAGG+AGG | + | chr4_1:64383351-64383370 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 64377106 | 64383959 | 64377106 | ID=Msa0563930;Name=Msa0563930 |
| chr4_1 | mRNA | 64377106 | 64383959 | 64377106 | ID=Msa0563930-mRNA-1;Parent=Msa0563930;Name=Msa0563930-mRNA-1;_AED=0.14;_eAED=0.19;_QI=0|0|0|1|0|0|13|0|847 |
| chr4_1 | exon | 64383735 | 64383959 | 64383735 | ID=Msa0563930-mRNA-1:exon:20605;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64383510 | 64383692 | 64383510 | ID=Msa0563930-mRNA-1:exon:20604;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64383261 | 64383500 | 64383261 | ID=Msa0563930-mRNA-1:exon:20603;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64383015 | 64383191 | 64383015 | ID=Msa0563930-mRNA-1:exon:20602;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64382846 | 64382987 | 64382846 | ID=Msa0563930-mRNA-1:exon:20601;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64381100 | 64381347 | 64381100 | ID=Msa0563930-mRNA-1:exon:20600;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64380968 | 64381057 | 64380968 | ID=Msa0563930-mRNA-1:exon:20599;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64380753 | 64380959 | 64380753 | ID=Msa0563930-mRNA-1:exon:20598;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64380523 | 64380740 | 64380523 | ID=Msa0563930-mRNA-1:exon:20597;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64380283 | 64380495 | 64380283 | ID=Msa0563930-mRNA-1:exon:20596;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64380202 | 64380270 | 64380202 | ID=Msa0563930-mRNA-1:exon:20595;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64379550 | 64379604 | 64379550 | ID=Msa0563930-mRNA-1:exon:20594;Parent=Msa0563930-mRNA-1 |
| chr4_1 | exon | 64377106 | 64377582 | 64377106 | ID=Msa0563930-mRNA-1:exon:20593;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64383735 | 64383959 | 64383735 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64383510 | 64383692 | 64383510 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64383261 | 64383500 | 64383261 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64383015 | 64383191 | 64383015 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64382846 | 64382987 | 64382846 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64381100 | 64381347 | 64381100 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64380968 | 64381057 | 64380968 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64380753 | 64380959 | 64380753 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64380523 | 64380740 | 64380523 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64380283 | 64380495 | 64380283 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64380202 | 64380270 | 64380202 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64379550 | 64379604 | 64379550 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| chr4_1 | CDS | 64377106 | 64377582 | 64377106 | ID=Msa0563930-mRNA-1:cds;Parent=Msa0563930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
