AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0566480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566480 MtrunA17_Chr8g0380981 94.286 1050 35 2 15 1057 25 1056 0.0 1977
Msa0566480 MtrunA17_Chr2g0303101 59.508 1057 348 15 2 1054 21 1001 0.0 1150
Msa0566480 MtrunA17_Chr1g0189211 56.915 564 236 2 14 574 131 690 0.0 670
Msa0566480 MtrunA17_Chr1g0189211 29.851 335 175 7 732 1054 941 1227 5.54e-37 151
Msa0566480 MtrunA17_Chr7g0261401 43.130 575 311 7 15 575 99 671 4.03e-149 466
Msa0566480 MtrunA17_Chr5g0397501 38.739 444 226 6 136 568 288 696 5.20e-85 301
Msa0566480 MtrunA17_Chr5g0397501 50.000 74 33 1 28 101 23 92 3.50e-14 77.8
Msa0566480 MtrunA17_Chr5g0410721 37.376 404 172 11 30 421 86 420 9.59e-61 223
Msa0566480 MtrunA17_Chr1g0164731 36.693 387 172 9 29 407 41 362 5.11e-56 205
Msa0566480 MtrunA17_Chr3g0116441 34.988 403 191 10 33 425 18 359 1.47e-52 201
Msa0566480 MtrunA17_Chr1g0164761 34.278 388 162 9 29 407 4 307 4.92e-52 192
Msa0566480 MtrunA17_Chr1g0199511 39.367 221 124 3 229 439 272 492 5.57e-41 164
Msa0566480 MtrunA17_Chr7g0214951 42.609 115 41 4 275 381 104 201 8.04e-16 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566480 AT1G08620.3 43.461 1017 480 16 14 954 141 1138 0.0 765
Msa0566480 AT1G08620.2 43.461 1017 480 16 14 954 127 1124 0.0 765
Msa0566480 AT1G08620.4 43.461 1017 480 16 14 954 127 1124 0.0 765
Msa0566480 AT1G08620.1 43.461 1017 480 16 14 954 127 1124 0.0 765
Msa0566480 AT4G20400.1 59.612 567 224 3 2 566 25 588 0.0 717
Msa0566480 AT4G20400.1 39.216 255 105 4 803 1053 743 951 2.20e-42 168
Msa0566480 AT1G30810.3 62.413 572 205 5 2 570 28 592 0.0 706
Msa0566480 AT1G30810.3 46.341 205 79 4 788 992 646 819 1.08e-45 178
Msa0566480 AT1G30810.2 62.413 572 205 5 2 570 28 592 0.0 706
Msa0566480 AT1G30810.2 46.341 205 79 4 788 992 646 819 1.08e-45 178
Msa0566480 AT1G30810.1 62.413 572 205 5 2 570 28 592 0.0 706
Msa0566480 AT1G30810.1 46.341 205 79 4 788 992 646 819 1.08e-45 178
Msa0566480 AT2G34880.1 59.825 570 202 10 5 566 33 583 0.0 687
Msa0566480 AT2G34880.1 42.857 217 95 4 775 991 618 805 1.15e-39 159
Msa0566480 AT4G20400.2 60.227 528 205 3 41 566 7 531 0.0 669
Msa0566480 AT4G20400.2 39.216 255 105 4 803 1053 686 894 2.95e-42 167
Msa0566480 AT2G38950.1 42.045 528 278 4 29 556 104 603 3.51e-135 425
Msa0566480 AT1G63490.1 40.898 423 206 6 142 554 38 426 3.61e-90 315
Msa0566480 AT1G63490.4 40.898 423 206 6 142 554 291 679 2.03e-89 315
Msa0566480 AT1G63490.4 54.412 68 27 1 34 101 32 95 1.39e-13 76.3
Msa0566480 AT1G63490.2 40.898 423 206 6 142 554 291 679 2.12e-89 315
Msa0566480 AT1G63490.2 54.412 68 27 1 34 101 32 95 1.39e-13 76.3
Msa0566480 AT5G46910.2 34.592 503 239 16 32 523 102 525 2.93e-62 224
Msa0566480 AT5G46910.1 34.394 503 240 15 32 523 102 525 6.32e-62 226
Msa0566480 AT5G04240.1 31.746 441 237 11 33 422 16 443 2.00e-46 182
Msa0566480 AT3G48430.1 31.884 414 209 11 33 422 20 384 1.73e-41 166
Msa0566480 AT1G63490.3 38.655 238 123 4 322 554 1 220 6.75e-41 164

Find 234 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCATGATAAGTTGTTATT+TGG 0.119436 4_1:-67578109 Msa0566480:CDS
TATCGCACTGTCCAGCATTC+TGG 0.177670 4_1:-67578286 Msa0566480:CDS
GTCATTCCTGCTGGATTTCT+TGG 0.180288 4_1:-67576587 Msa0566480:CDS
AAAATCTAAAATGTTTAAAT+TGG 0.189270 4_1:-67578033 Msa0566480:CDS
TCTAGAAAGATTCCTGAAAA+AGG 0.206821 4_1:-67575861 Msa0566480:CDS
ATCACTACCTTTACCATCTT+TGG 0.219822 4_1:+67579661 None:intergenic
CTGCAAATGCACTCAGATTT+AGG 0.254376 4_1:-67576953 Msa0566480:CDS
CGATTTCTGTAGGTGTATTA+TGG 0.257794 4_1:-67579477 Msa0566480:intron
ACACTTATTGTGACGGATTT+CGG 0.268838 4_1:+67577141 None:intergenic
TTCGGTTGAGCTTGTTAGTT+TGG 0.273455 4_1:-67576831 Msa0566480:CDS
AGTTCTTTGTATTTGAATAT+TGG 0.274068 4_1:-67577205 Msa0566480:CDS
CCTTTCGCCATCCATTATTC+AGG 0.275215 4_1:-67576236 Msa0566480:intron
TCTGAATCTGATGATAAGTT+TGG 0.276549 4_1:-67579770 Msa0566480:CDS
CTCAAAGAATTTCAGCAATA+TGG 0.283663 4_1:-67579722 Msa0566480:CDS
GGTACACCATACCATACTTT+TGG 0.284346 4_1:+67578707 None:intergenic
CAAGTTAATTCTGGATCTTC+AGG 0.284422 4_1:-67576034 Msa0566480:CDS
AATAACTTTGCGCGACTTCC+AGG 0.284607 4_1:-67579354 Msa0566480:CDS
AAATTGTCCCTCCAGCTTGC+TGG 0.294266 4_1:-67579994 Msa0566480:CDS
ATCAATGGTCATAAAATGTT+TGG 0.302237 4_1:-67576262 Msa0566480:CDS
CATATCTCTTTCTCCTTAAG+AGG 0.303958 4_1:+67579959 None:intergenic
CATCAATCCACAACACAAAA+AGG 0.310969 4_1:-67580424 Msa0566480:intron
ACCAACTCGTTGAGTAGATT+TGG 0.312207 4_1:+67578617 None:intergenic
AATCACAAACAAGTTAATTC+TGG 0.322127 4_1:-67576043 Msa0566480:CDS
TGTGGATCTGACTGGTGATA+TGG 0.338493 4_1:-67577284 Msa0566480:CDS
CCAACTAATGTTCGAAATTC+CGG 0.341000 4_1:-67577010 Msa0566480:CDS
ACAGGTGTTTCACCGATTAT+AGG 0.342856 4_1:+67580194 None:intergenic
CGAGAGACGTGAACCGTCTT+TGG 0.347777 4_1:-67579627 Msa0566480:CDS
AATGGATAAAAGATTTGTTC+TGG 0.348982 4_1:-67577614 Msa0566480:CDS
AGTTTGCATTACCTGAATAA+TGG 0.351329 4_1:+67576225 None:intergenic
CGAAATTCCGGTACACTTGA+TGG 0.353346 4_1:-67576998 Msa0566480:CDS
CCGGAATTTCGAACATTAGT+TGG 0.354395 4_1:+67577010 None:intergenic
CAAAGATGGGAACGTGTAAT+AGG 0.357690 4_1:-67579829 Msa0566480:CDS
GATAAGTTTGGATTCCAATC+AGG 0.359070 4_1:-67579758 Msa0566480:CDS
GGCTCCACCTTGCCCTCTTA+AGG 0.362816 4_1:-67579972 Msa0566480:CDS
TGCTGGTGGTATTTCTGTCT+TGG 0.365569 4_1:-67577053 Msa0566480:CDS
CTAAGACAAGAATAGTTATC+AGG 0.379211 4_1:+67577664 None:intergenic
TATGGAGCTGACTTGGAAAC+TGG 0.379640 4_1:-67579459 Msa0566480:CDS
GGTTGCTCTTCAAACAAATC+AGG 0.381453 4_1:+67578638 None:intergenic
CAATAAAGTTAAGGAGGATA+AGG 0.382232 4_1:-67577230 Msa0566480:CDS
TGTCAAAGATATATTTGTAT+TGG 0.383264 4_1:+67576886 None:intergenic
TCAGTTAAGGATGATGTCTT+AGG 0.384378 4_1:+67579417 None:intergenic
CTTTCAGAGACAACTCTTCA+TGG 0.388357 4_1:-67578061 Msa0566480:CDS
TCGGTTGAGCTTGTTAGTTT+GGG 0.393615 4_1:-67576830 Msa0566480:CDS
TTCAGCATCTTTAAATGATC+CGG 0.400591 4_1:+67577778 None:intergenic
ATCGCACTGTCCAGCATTCT+GGG 0.402356 4_1:-67578285 Msa0566480:CDS
GCAAATCAACTTGCTGAATA+CGG 0.404788 4_1:+67579915 None:intergenic
ACTGGGGTGACCCAAAAGTA+TGG 0.405240 4_1:-67578718 Msa0566480:CDS
TCCTCAGACTTAAGTATTGA+AGG 0.408574 4_1:+67578319 None:intergenic
CTCTTAAGGAGAAAGAGATA+TGG 0.410495 4_1:-67579958 Msa0566480:CDS
ATTCACTTAATTATCTGCAC+TGG 0.413564 4_1:-67578736 Msa0566480:CDS
TGTTCTTACCAATGCAGTTA+AGG 0.414403 4_1:-67577987 Msa0566480:intron
ATCCAAATAACAACTTATCA+TGG 0.414820 4_1:+67578107 None:intergenic
ACATTGGTTGAAGCATTAGA+AGG 0.417317 4_1:-67577565 Msa0566480:CDS
CTTGATGGTTGTAAATTGTT+TGG 0.418077 4_1:-67576983 Msa0566480:CDS
ACTGGGATCTTGAGCTTCAA+TGG 0.419115 4_1:+67576087 None:intergenic
AAATATATTCCAGGTTACTT+TGG 0.419381 4_1:-67576425 Msa0566480:CDS
CAAAGATATATTTGTATTGG+AGG 0.424188 4_1:+67576889 None:intergenic
GTGTTTGTGAAAACCTCGTT+GGG 0.424363 4_1:+67576394 None:intergenic
GAAGCATGTCGGCCTATAAT+CGG 0.425042 4_1:-67580206 Msa0566480:CDS
CTTCGATTCGGTTGAGGAAA+GGG 0.427057 4_1:-67577743 Msa0566480:CDS
TCAGATTTGTATGCTATGTC+TGG 0.427067 4_1:-67579387 Msa0566480:CDS
AGAGAGGCTTGAATGGCTTC+CGG 0.431090 4_1:-67577797 Msa0566480:CDS
ACATAGTTACAGATGCTTGA+TGG 0.431354 4_1:+67576617 None:intergenic
ATCTGAATCACTCTCAGTTA+AGG 0.431446 4_1:+67579404 None:intergenic
AATTGTCCCTCCAGCTTGCT+GGG 0.433006 4_1:-67579993 Msa0566480:CDS
ATATTTAGCAAAGAATTTGC+AGG 0.436457 4_1:+67577166 None:intergenic
GTTTGTGAAGTCATTCCTGC+TGG 0.436870 4_1:-67576596 Msa0566480:CDS
TGCTTCGACTGGATCCCATC+TGG 0.438506 4_1:+67580223 None:intergenic
CTTAATAGTATGCTTGAAAC+GGG 0.448898 4_1:-67576923 Msa0566480:CDS
GACTTGGAAACTGGAGCACT+TGG 0.449548 4_1:-67579450 Msa0566480:CDS
AGTTTGGGATCTGTTGTGTA+TGG 0.451056 4_1:-67576815 Msa0566480:CDS
TTGCATGCACGAACAAGATA+TGG 0.452082 4_1:-67577473 Msa0566480:CDS
GGTCATGGACAATAAAGTTA+AGG 0.453833 4_1:-67577239 Msa0566480:CDS
GGAACGTGTAATAGGAGAAC+TGG 0.458459 4_1:-67579821 Msa0566480:CDS
AATAAAGTTAAGGAGGATAA+GGG 0.464006 4_1:-67577229 Msa0566480:CDS
CAAGGTGGAGCCCAGCAAGC+TGG 0.465917 4_1:+67579983 None:intergenic
GACTTGCACCTCTCTGCTGT+TGG 0.469090 4_1:-67577700 Msa0566480:CDS
AATCATTACCTTAACTGCAT+TGG 0.469539 4_1:+67577979 None:intergenic
GTCATGAATGTGTAGGGTAC+TGG 0.470928 4_1:-67576066 Msa0566480:CDS
TGGTGTCGATTTGATAAAGC+TGG 0.472194 4_1:-67575936 Msa0566480:CDS
AAAAGATCGCCTTCTTGTAC+AGG 0.472566 4_1:-67577412 Msa0566480:CDS
ATAAATAAGCGCAAGAGTCT+CGG 0.473275 4_1:-67576322 Msa0566480:CDS
AATTCTTTGAGTGTGAAGTC+TGG 0.473727 4_1:+67579734 None:intergenic
CGCATTGCTCGTAACTCGTC+AGG 0.474777 4_1:+67575833 None:intergenic
GAAACTGGAGCACTTGGAAG+TGG 0.475135 4_1:-67579444 Msa0566480:CDS
AGGATATTGAAGGTGAATAC+TGG 0.475212 4_1:-67579604 Msa0566480:CDS
AAAGTATGGTATGGTGTACC+TGG 0.475229 4_1:-67578704 Msa0566480:CDS
CCATGCATAAACCAATCATA+TGG 0.479121 4_1:+67578181 None:intergenic
TCTTAAGGAGAAAGAGATAT+GGG 0.479506 4_1:-67579957 Msa0566480:CDS
ACTTAATAGTATGCTTGAAA+CGG 0.483422 4_1:-67576924 Msa0566480:CDS
TTTGAAGGAAGTGACATCTC+AGG 0.484096 4_1:-67579318 Msa0566480:CDS
CAATGACTTCGATTCGGTTG+AGG 0.485568 4_1:-67577749 Msa0566480:CDS
ACACCTCAGCAGATAAGTGC+TGG 0.487268 4_1:-67576375 Msa0566480:CDS
TTCACTTAATTATCTGCACT+GGG 0.487394 4_1:-67578735 Msa0566480:CDS
ACGTGGAAAGCAGTCAAAGA+TGG 0.489358 4_1:-67579843 Msa0566480:CDS
TGAATGTGGCTCCATATGAT+TGG 0.492536 4_1:-67578192 Msa0566480:CDS
AGCCGATGAGGAAGAAAAGT+AGG 0.498687 4_1:-67579880 Msa0566480:CDS
CAGTCACATTTCTTCAGAGT+TGG 0.502183 4_1:-67577347 Msa0566480:CDS
TTGACAGACAAGGATAATGA+TGG 0.505126 4_1:-67577824 Msa0566480:intron
AATTTGTTATCACGTTTCCA+AGG 0.505646 4_1:-67578261 Msa0566480:CDS
TAACAAATTCCCCAGAATGC+TGG 0.506467 4_1:+67578275 None:intergenic
TGAACTAGACATGCCTCCCT+TGG 0.507459 4_1:-67576299 Msa0566480:CDS
CAAATCAACTTGCTGAATAC+GGG 0.511163 4_1:+67579916 None:intergenic
CCGTCTTTGGAGGATATTGA+AGG 0.513289 4_1:-67579614 Msa0566480:CDS
TTAGTTCCATGGCTGTATGT+TGG 0.515006 4_1:-67579291 Msa0566480:CDS
TTGAAGGAAGTGACATCTCA+GGG 0.515084 4_1:-67579317 Msa0566480:CDS
AACTTCTCGTACACCTTATG+TGG 0.516226 4_1:-67577302 Msa0566480:CDS
GAGACGTGAACCGTCTTTGG+AGG 0.516381 4_1:-67579624 Msa0566480:CDS
GTTGTTATTTGGATCTGCTA+AGG 0.517525 4_1:-67578098 Msa0566480:CDS
GATGGACAATGACTTCGATT+CGG 0.519329 4_1:-67577755 Msa0566480:CDS
AAGCCACAGTGGTATGCCCT+TGG 0.519658 4_1:+67578244 None:intergenic
TCATTTAAAGATGCTGAAGA+TGG 0.519800 4_1:-67577773 Msa0566480:CDS
AAACTGAGAATTACAAAGAA+GGG 0.521718 4_1:-67577435 Msa0566480:CDS
ATTTGTATGCTATGTCTGGC+TGG 0.521950 4_1:-67579383 Msa0566480:CDS
AAGTTCTCATTCGTTTGAAG+AGG 0.523017 4_1:-67575894 Msa0566480:CDS
AAGCATGCAATATATCCAAA+AGG 0.529982 4_1:-67576776 Msa0566480:intron
CTTAAAACAGAAACAAGGTC+AGG 0.530095 4_1:+67576543 None:intergenic
CTAAGGGACGTATCTTAGCT+AGG 0.531048 4_1:+67580038 None:intergenic
ACTTCGATTCGGTTGAGGAA+AGG 0.531289 4_1:-67577744 Msa0566480:CDS
CGTGGAAAGCAGTCAAAGAT+GGG 0.533229 4_1:-67579842 Msa0566480:CDS
GAGCTACTGCACAACATCAA+TGG 0.533625 4_1:-67576277 Msa0566480:CDS
ATAGGCCGACATGCTTCGAC+TGG 0.534634 4_1:+67580212 None:intergenic
ATAGCTGAAGCATGGCTCCC+AGG 0.534934 4_1:+67578686 None:intergenic
GTGTGAAGTCTGGCCCTGAT+TGG 0.535187 4_1:+67579744 None:intergenic
TCTATCAGCACTTTCAGCGC+AGG 0.535328 4_1:+67575770 None:intergenic
TAAATTGGAGAAATGCTTGT+GGG 0.535780 4_1:-67578018 Msa0566480:CDS
GGTTCAAGTAATAGCTCTCT+AGG 0.535894 4_1:-67575980 Msa0566480:CDS
TTAAGAGGTACCTCAAATGT+TGG 0.536321 4_1:+67580164 None:intergenic
GATGACTCTAAGTTAACTTG+TGG 0.541352 4_1:-67576001 Msa0566480:CDS
TACCACTGTGGCTTCAGCAG+TGG 0.544420 4_1:-67578235 Msa0566480:CDS
GGTGTATTATGGAGCTGACT+TGG 0.544686 4_1:-67579466 Msa0566480:CDS
TCAAAACATAATGCAGAACC+TGG 0.546610 4_1:+67579336 None:intergenic
TTTCATGATGAGACTCTGAA+TGG 0.546643 4_1:+67577323 None:intergenic
AGTTAACTTAGAGTCATCAA+TGG 0.547322 4_1:+67576006 None:intergenic
GCAGATAATTAAGTGAATAG+AGG 0.549173 4_1:+67578741 None:intergenic
TCTTTCTCCTTAAGAGGGCA+AGG 0.549473 4_1:+67579965 None:intergenic
AAAACTGAGAATTACAAAGA+AGG 0.549929 4_1:-67577436 Msa0566480:CDS
GTACCCTACACATTCATGAC+TGG 0.551735 4_1:+67576069 None:intergenic
TCCAAATAACAACTTATCAT+GGG 0.552438 4_1:+67578108 None:intergenic
ATAAGTTTGGATTCCAATCA+GGG 0.554076 4_1:-67579757 Msa0566480:CDS
ATGTGACTGTGAGGACTGCT+AGG 0.556875 4_1:+67577361 None:intergenic
TCACCAGTCAGATCCACATA+AGG 0.560398 4_1:+67577289 None:intergenic
CCATATGATTGGTTTATGCA+TGG 0.561009 4_1:-67578181 Msa0566480:CDS
ATCCCAGTCATGAATGTGTA+GGG 0.562524 4_1:-67576072 Msa0566480:CDS
ACATTAGTTGGACATGGTGA+AGG 0.562740 4_1:+67577022 None:intergenic
TGCCGCAGATATCATCCAGA+TGG 0.562975 4_1:-67580238 Msa0566480:intron
TAGGAGTTTGAAGACACGCT+TGG 0.563769 4_1:-67580064 Msa0566480:CDS
ATGGAACACACTTATTGTGA+CGG 0.563827 4_1:+67577134 None:intergenic
AGTGATGCCAAAGATGGTAA+AGG 0.565685 4_1:-67579668 Msa0566480:CDS
CATGAAGAGTTGTCTCTGAA+AGG 0.565752 4_1:+67578062 None:intergenic
TGCATTACCTGAATAATGGA+TGG 0.567093 4_1:+67576229 None:intergenic
GGTGTTCTTCCAAAGTAACC+TGG 0.567586 4_1:+67576416 None:intergenic
ATGCCATACGGTTCAGCTAA+GGG 0.571367 4_1:+67580022 None:intergenic
ATATCTCTTTCTCCTTAAGA+GGG 0.572645 4_1:+67579960 None:intergenic
AGTTGTTTCTGCTAGTGTTG+AGG 0.574329 4_1:-67577500 Msa0566480:CDS
AGAAATGCTTGTGGGAAAGA+TGG 0.574345 4_1:-67578010 Msa0566480:CDS
TGCTGGACAGTGCGATACAC+AGG 0.576053 4_1:+67578292 None:intergenic
ACTACATACCCAGCAAAATG+AGG 0.576860 4_1:+67579257 None:intergenic
TACCCTACACATTCATGACT+GGG 0.577744 4_1:+67576070 None:intergenic
GGGTTGAGTGATGCCAAAGA+TGG 0.578033 4_1:-67579674 Msa0566480:CDS
TTTACAACCATCAAGTGTAC+CGG 0.580118 4_1:+67576991 None:intergenic
TCTGCTAAGGAAGCTGTACA+TGG 0.580656 4_1:-67578085 Msa0566480:CDS
GGTGTTTGTGAAAACCTCGT+TGG 0.582249 4_1:+67576393 None:intergenic
GATGTTGTGCAGTAGCTCCA+AGG 0.582324 4_1:+67576282 None:intergenic
CGATTTGATAAAGCTGGAGG+AGG 0.582351 4_1:-67575930 Msa0566480:CDS
CCTGAATAATGGATGGCGAA+AGG 0.582584 4_1:+67576236 None:intergenic
ACCAAATCTACTCAACGAGT+TGG 0.584203 4_1:-67578618 Msa0566480:intron
CAATAAGTGTGTTCCATATG+CGG 0.587501 4_1:-67577128 Msa0566480:CDS
ATTTGTTATCACGTTTCCAA+GGG 0.587884 4_1:-67578260 Msa0566480:CDS
CATGGGACAAGGATGTCTTA+CGG 0.588015 4_1:+67578125 None:intergenic
TTTCGAACATTAGTTGGACA+TGG 0.589138 4_1:+67577016 None:intergenic
GGTGGAGCCCAGCAAGCTGG+AGG 0.590956 4_1:+67579986 None:intergenic
ACCACGTGCAATAGAAGCGT+GGG 0.592481 4_1:-67577539 Msa0566480:CDS
TCATTAGTTCCTGTACAAGA+AGG 0.593267 4_1:+67577403 None:intergenic
TTCAATACTTAAGTCTGAGG+AGG 0.593936 4_1:-67578317 Msa0566480:CDS
ACACCTTATGTGGATCTGAC+TGG 0.594288 4_1:-67577292 Msa0566480:CDS
GCGTGGGAAACTAGAAACAT+TGG 0.596035 4_1:-67577523 Msa0566480:CDS
CATGGACAATAAAGTTAAGG+AGG 0.596567 4_1:-67577236 Msa0566480:CDS
CAACTTGAATGATACTATGT+TGG 0.596879 4_1:-67577260 Msa0566480:CDS
AATAGATGAGCTAAGTACAT+TGG 0.598739 4_1:-67577581 Msa0566480:CDS
CACCTCAGCAGATAAGTGCT+GGG 0.599510 4_1:-67576374 Msa0566480:CDS
GTTCTGATGCACAATTGACT+CGG 0.601460 4_1:-67575799 Msa0566480:CDS
GATCCCAGTCATGAATGTGT+AGG 0.603075 4_1:-67576073 Msa0566480:CDS
ATGTTGTGCAGTAGCTCCAA+GGG 0.604106 4_1:+67576283 None:intergenic
GCCGATGAGGAAGAAAAGTA+GGG 0.604404 4_1:-67579879 Msa0566480:CDS
GAATGATACTATGTTGGTCA+TGG 0.604927 4_1:-67577254 Msa0566480:CDS
TTCCCAGCACTTATCTGCTG+AGG 0.605988 4_1:+67576372 None:intergenic
AACATAGAACTTAGTGCTGG+TGG 0.608237 4_1:-67577067 Msa0566480:CDS
CGTCCCTTAGCTGAACCGTA+TGG 0.608504 4_1:-67580025 Msa0566480:CDS
GACAACATAGAACTTAGTGC+TGG 0.610680 4_1:-67577070 Msa0566480:CDS
CACATTCCAACATACAGCCA+TGG 0.611126 4_1:+67579285 None:intergenic
TCCTTCAATACTTAAGTCTG+AGG 0.614807 4_1:-67578320 Msa0566480:CDS
CCTTCAATATCCTCCAAAGA+CGG 0.614825 4_1:+67579614 None:intergenic
GCCGCAGATATCATCCAGAT+GGG 0.615605 4_1:-67580237 Msa0566480:intron
AAAGGGCCAAGAAATCCAGC+AGG 0.615665 4_1:+67576581 None:intergenic
AAGACGGTTCACGTCTCTCG+TGG 0.616908 4_1:+67579630 None:intergenic
GAAACCGACTGATGAGGTCG+AGG 0.617162 4_1:-67579570 Msa0566480:intron
TATGCCATACGGTTCAGCTA+AGG 0.620993 4_1:+67580021 None:intergenic
TTCAGAACCGAGAGCCGATG+AGG 0.624951 4_1:-67579892 Msa0566480:CDS
GTGGAGCCCAGCAAGCTGGA+GGG 0.625471 4_1:+67579987 None:intergenic
AATAGAGAAACCGACTGATG+AGG 0.625485 4_1:-67579576 Msa0566480:CDS
TTGTGCAGAGGCTGTGAATG+TGG 0.627642 4_1:-67578206 Msa0566480:CDS
CTTGTACAGGAACTAATGAG+AGG 0.627759 4_1:-67577399 Msa0566480:CDS
AACCACGTGCAATAGAAGCG+TGG 0.632059 4_1:-67577540 Msa0566480:CDS
TTCTCCTTAAGAGGGCAAGG+TGG 0.634638 4_1:+67579968 None:intergenic
ATTACCTCGACCTCATCAGT+CGG 0.637187 4_1:+67579566 None:intergenic
TGAGGAAGAAAAGTAGGGCA+AGG 0.637571 4_1:-67579874 Msa0566480:CDS
CATCTTCTATAGCTGAAGCA+TGG 0.639567 4_1:+67578678 None:intergenic
CAGTGGCTTCAATTGTGCAG+AGG 0.641990 4_1:-67578218 Msa0566480:CDS
TTAAATTGGAGAAATGCTTG+TGG 0.644063 4_1:-67578019 Msa0566480:CDS
TCAAATGTTGGATAAAACAC+AGG 0.645267 4_1:+67580176 None:intergenic
GGGATCCAGTCGAAGCATGT+CGG 0.647902 4_1:-67580217 Msa0566480:CDS
AAGCTGGAGGAGGATGACAT+AGG 0.648499 4_1:-67575920 Msa0566480:CDS
TCAACTTGCTGAATACGGGT+CGG 0.649157 4_1:+67579920 None:intergenic
TCCCACGCTTCTATTGCACG+TGG 0.656740 4_1:+67577538 None:intergenic
AAGTATGGTATGGTGTACCT+GGG 0.658392 4_1:-67578703 Msa0566480:CDS
CAGCTATAGAAGATGCAATG+AGG 0.660862 4_1:-67578670 Msa0566480:CDS
TAACAACTTATCATGGGACA+AGG 0.661705 4_1:+67578114 None:intergenic
TCGCACTGTCCAGCATTCTG+GGG 0.664789 4_1:-67578284 Msa0566480:CDS
GGTGACCCAAAAGTATGGTA+TGG 0.666509 4_1:-67578713 Msa0566480:CDS
TGTCGATTTGATAAAGCTGG+AGG 0.667838 4_1:-67575933 Msa0566480:CDS
ATAGCTCTCTAGGTGACTCG+AGG 0.683160 4_1:-67575970 Msa0566480:CDS
TTGTGCAGTAGCTCCAAGGG+AGG 0.695431 4_1:+67576286 None:intergenic
CTGATGCACAATTGACTCGG+TGG 0.695486 4_1:-67575796 Msa0566480:CDS
AGGGCAAGGAAACGAAAACG+TGG 0.698161 4_1:-67579860 Msa0566480:CDS
CTGTTGTGTATGGAAAACAT+TGG 0.709730 4_1:-67576805 Msa0566480:CDS
TGAAGGAAGTGACATCTCAG+GGG 0.710950 4_1:-67579316 Msa0566480:CDS
AGCCACTGCTGAAGCCACAG+TGG 0.722140 4_1:+67578233 None:intergenic
TCTGAAGAAATGTGACTGTG+AGG 0.731640 4_1:+67577352 None:intergenic
TTTCCAAGGGCATACCACTG+TGG 0.743487 4_1:-67578247 Msa0566480:CDS
TGTTTGTGAAAACCTCGTTG+GGG 0.744486 4_1:+67576395 None:intergenic
TTTGGAAGAACACCCCAACG+AGG 0.753244 4_1:-67576407 Msa0566480:CDS
ACTCACAACCAACAGCAGAG+AGG 0.754541 4_1:+67577692 None:intergenic
TCACTTAATTATCTGCACTG+GGG 0.758613 4_1:-67578734 Msa0566480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATCTAAACATATATTTAT+AGG + chr4_1:67575879-67575898 None:intergenic 10.0%
!! AATAATTATAATCTAATTGA+AGG - chr4_1:67577139-67577158 Msa0566480:CDS 10.0%
!!! AAAATCTAAAATGTTTAAAT+TGG - chr4_1:67578159-67578178 Msa0566480:CDS 10.0%
!!! ATTTTTCTAAATATATGAAA+GGG + chr4_1:67578269-67578288 None:intergenic 10.0%
!!! TTAATTTTATTCTTCTCATT+AGG - chr4_1:67576109-67576128 Msa0566480:intron 15.0%
!! ATCAGAAGATATATAAAATA+AGG + chr4_1:67577808-67577827 None:intergenic 15.0%
!!! TTTTTCTAAATATATGAAAG+GGG + chr4_1:67578268-67578287 None:intergenic 15.0%
!!! GATTTTTCTAAATATATGAA+AGG + chr4_1:67578270-67578289 None:intergenic 15.0%
!! CACAAAAATATAAACAAAAA+AGG + chr4_1:67578333-67578352 None:intergenic 15.0%
!!! AAATACTAAACTTTTTCATT+GGG + chr4_1:67579343-67579362 None:intergenic 15.0%
!! AATGAAAAAGTTTAGTATTT+CGG - chr4_1:67579343-67579362 Msa0566480:CDS 15.0%
!!! TTTAACTTTTCTTTTTCTTT+TGG - chr4_1:67579501-67579520 Msa0566480:intron 15.0%
!! TTCAATAAAAAATATATTCC+AGG - chr4_1:67579758-67579777 Msa0566480:CDS 15.0%
!!! TTTTGAAATTGAATGTAACA+TGG - chr4_1:67575913-67575932 Msa0566480:CDS 20.0%
!! AATATTGTTGACAACATTAT+TGG - chr4_1:67576646-67576665 Msa0566480:CDS 20.0%
!! TATGAATGAAGAAAAGTTTA+AGG - chr4_1:67576987-67577006 Msa0566480:CDS 20.0%
!! AAAAAAACATATAACTCTAC+AGG + chr4_1:67577065-67577084 None:intergenic 20.0%
!! ATAATCTAATTGAAGGTTAA+TGG - chr4_1:67577146-67577165 Msa0566480:CDS 20.0%
!!! ATGCATAATGTATATTTTGT+AGG - chr4_1:67577696-67577715 Msa0566480:CDS 20.0%
!! AGTTCTTTGTATTTGAATAT+TGG - chr4_1:67578987-67579006 Msa0566480:intron 20.0%
!! TGTCAAAGATATATTTGTAT+TGG + chr4_1:67579309-67579328 None:intergenic 20.0%
!!! AATACTAAACTTTTTCATTG+GGG + chr4_1:67579342-67579361 None:intergenic 20.0%
!!! GAAATACTAAACTTTTTCAT+TGG + chr4_1:67579344-67579363 None:intergenic 20.0%
!! ACTTATAATATATACGTCTA+TGG + chr4_1:67580047-67580066 None:intergenic 20.0%
!! ACATGATAGTGATAATTAAG+AGG + chr4_1:67576046-67576065 None:intergenic 25.0%
!! CTATCATGTACTATAGATTT+TGG - chr4_1:67576057-67576076 Msa0566480:CDS 25.0%
!! ACAATTTTACATATGCCATA+CGG + chr4_1:67576185-67576204 None:intergenic 25.0%
!!! TCTTTTAAAGATTGCTACTT+CGG - chr4_1:67576497-67576516 Msa0566480:intron 25.0%
! TATTACTATACGATTTCTGT+AGG - chr4_1:67576705-67576724 Msa0566480:intron 25.0%
!! AAGCTAAGTTGACAAATTTA+AGG - chr4_1:67577094-67577113 Msa0566480:CDS 25.0%
! GTAAGCACTCATAATATTTA+AGG - chr4_1:67577262-67577281 Msa0566480:CDS 25.0%
! TATATATCTTCTGATTGTAG+TGG - chr4_1:67577813-67577832 Msa0566480:CDS 25.0%
! TCCAAATAACAACTTATCAT+GGG + chr4_1:67578087-67578106 None:intergenic 25.0%
! ATCCAAATAACAACTTATCA+TGG + chr4_1:67578088-67578107 None:intergenic 25.0%
! TAGAAAAATCCGTAAAACTT+TGG - chr4_1:67578280-67578299 Msa0566480:CDS 25.0%
!! AAATACCATCCAAAGTTTTA+CGG + chr4_1:67578292-67578311 None:intergenic 25.0%
!! AATGGATAAAAGATTTGTTC+TGG - chr4_1:67578578-67578597 Msa0566480:intron 25.0%
! AAAACTGAGAATTACAAAGA+AGG - chr4_1:67578756-67578775 Msa0566480:CDS 25.0%
! AAACTGAGAATTACAAAGAA+GGG - chr4_1:67578757-67578776 Msa0566480:CDS 25.0%
! AATAAAGTTAAGGAGGATAA+GGG - chr4_1:67578963-67578982 Msa0566480:intron 25.0%
! ATATTTAGCAAAGAATTTGC+AGG + chr4_1:67579029-67579048 None:intergenic 25.0%
! ACTTAATAGTATGCTTGAAA+CGG - chr4_1:67579268-67579287 Msa0566480:CDS 25.0%
! CAAAGATATATTTGTATTGG+AGG + chr4_1:67579306-67579325 None:intergenic 25.0%
!! ATAAAAGAACAATCTAAGAC+CGG + chr4_1:67579464-67579483 None:intergenic 25.0%
!! TTCTTTTGGTGAAATTATGA+AGG - chr4_1:67579515-67579534 Msa0566480:intron 25.0%
! AAATATATTCCAGGTTACTT+TGG - chr4_1:67579767-67579786 Msa0566480:CDS 25.0%
! ATCAATGGTCATAAAATGTT+TGG - chr4_1:67579930-67579949 Msa0566480:CDS 25.0%
! ACTGAAACAGTTTATCATAA+TGG + chr4_1:67580085-67580104 None:intergenic 25.0%
! AATCACAAACAAGTTAATTC+TGG - chr4_1:67580149-67580168 Msa0566480:intron 25.0%
! GTAAATACCTTTTTGTGTTG+TGG + chr4_1:67575778-67575797 None:intergenic 30.0%
TCAAATGTTGGATAAAACAC+AGG + chr4_1:67576019-67576038 None:intergenic 30.0%
! TGTGTTTTATCCAACATTTG+AGG - chr4_1:67576018-67576037 Msa0566480:CDS 30.0%
! TCATGTACTATAGATTTTGG+CGG - chr4_1:67576060-67576079 Msa0566480:CDS 30.0%
ATATCTCTTTCTCCTTAAGA+GGG + chr4_1:67576235-67576254 None:intergenic 30.0%
TCTTAAGGAGAAAGAGATAT+GGG - chr4_1:67576235-67576254 Msa0566480:intron 30.0%
TCTGAATCTGATGATAAGTT+TGG - chr4_1:67576422-67576441 Msa0566480:CDS 30.0%
ATAAGTTTGGATTCCAATCA+GGG - chr4_1:67576435-67576454 Msa0566480:CDS 30.0%
CTCAAAGAATTTCAGCAATA+TGG - chr4_1:67576470-67576489 Msa0566480:intron 30.0%
!! CTTTTAAAGATTGCTACTTC+GGG - chr4_1:67576498-67576517 Msa0566480:intron 30.0%
! ATTTGTCAACTTAGCTTTCA+TGG + chr4_1:67577091-67577110 None:intergenic 30.0%
! AAATCATTTGATGATCGCAT+TGG + chr4_1:67577218-67577237 None:intergenic 30.0%
! CGGTGTTAATTACTCTTTAT+AGG + chr4_1:67577386-67577405 None:intergenic 30.0%
GCAGATAATTAAGTGAATAG+AGG + chr4_1:67577454-67577473 None:intergenic 30.0%
ATTCACTTAATTATCTGCAC+TGG - chr4_1:67577456-67577475 Msa0566480:CDS 30.0%
TTCACTTAATTATCTGCACT+GGG - chr4_1:67577457-67577476 Msa0566480:CDS 30.0%
TTGTTCACGAATTATGTACA+TGG + chr4_1:67577663-67577682 None:intergenic 30.0%
!! AATTTGTTATCACGTTTCCA+AGG - chr4_1:67577931-67577950 Msa0566480:intron 30.0%
!! ATTTGTTATCACGTTTCCAA+GGG - chr4_1:67577932-67577951 Msa0566480:intron 30.0%
! TCCCATGATAAGTTGTTATT+TGG - chr4_1:67578083-67578102 Msa0566480:CDS 30.0%
TTAAATTGGAGAAATGCTTG+TGG - chr4_1:67578173-67578192 Msa0566480:CDS 30.0%
TAAATTGGAGAAATGCTTGT+GGG - chr4_1:67578174-67578193 Msa0566480:CDS 30.0%
AATCATTACCTTAACTGCAT+TGG + chr4_1:67578216-67578235 None:intergenic 30.0%
AAAATCCGTAAAACTTTGGA+TGG - chr4_1:67578284-67578303 Msa0566480:CDS 30.0%
TTCAGCATCTTTAAATGATC+CGG + chr4_1:67578417-67578436 None:intergenic 30.0%
TCATTTAAAGATGCTGAAGA+TGG - chr4_1:67578419-67578438 Msa0566480:intron 30.0%
CTAAGACAAGAATAGTTATC+AGG + chr4_1:67578531-67578550 None:intergenic 30.0%
AATAGATGAGCTAAGTACAT+TGG - chr4_1:67578611-67578630 Msa0566480:intron 30.0%
CAACTTGAATGATACTATGT+TGG - chr4_1:67578932-67578951 Msa0566480:intron 30.0%
CAATAAAGTTAAGGAGGATA+AGG - chr4_1:67578962-67578981 Msa0566480:intron 30.0%
! CTTGATGGTTGTAAATTGTT+TGG - chr4_1:67579209-67579228 Msa0566480:intron 30.0%
CTTAATAGTATGCTTGAAAC+GGG - chr4_1:67579269-67579288 Msa0566480:CDS 30.0%
AAGCATGCAATATATCCAAA+AGG - chr4_1:67579416-67579435 Msa0566480:CDS 30.0%
TTGAGCTTAAAACAGAAACA+AGG + chr4_1:67579657-67579676 None:intergenic 30.0%
AGTTTGCATTACCTGAATAA+TGG + chr4_1:67579970-67579989 None:intergenic 30.0%
TGTTAGGTGTAAGCTAAAAA+AGG + chr4_1:67580018-67580037 None:intergenic 30.0%
AGTTAACTTAGAGTCATCAA+TGG + chr4_1:67580189-67580208 None:intergenic 30.0%
TCTAGAAAGATTCCTGAAAA+AGG - chr4_1:67580331-67580350 Msa0566480:intron 30.0%
CTAGAAAGATTCCTGAAAAA+GGG - chr4_1:67580332-67580351 Msa0566480:intron 30.0%
!! CTTTTTGTGTTGTGGATTGA+TGG + chr4_1:67575770-67575789 None:intergenic 35.0%
CATCAATCCACAACACAAAA+AGG - chr4_1:67575768-67575787 Msa0566480:CDS 35.0%
!! TTAAGAGGTACCTCAAATGT+TGG + chr4_1:67576031-67576050 None:intergenic 35.0%
CATATCTCTTTCTCCTTAAG+AGG + chr4_1:67576236-67576255 None:intergenic 35.0%
CTCTTAAGGAGAAAGAGATA+TGG - chr4_1:67576234-67576253 Msa0566480:intron 35.0%
!! CAAATCAACTTGCTGAATAC+GGG + chr4_1:67576279-67576298 None:intergenic 35.0%
!! GCAAATCAACTTGCTGAATA+CGG + chr4_1:67576280-67576299 None:intergenic 35.0%
GATAAGTTTGGATTCCAATC+AGG - chr4_1:67576434-67576453 Msa0566480:CDS 35.0%
AATTCTTTGAGTGTGAAGTC+TGG + chr4_1:67576461-67576480 None:intergenic 35.0%
ATCACTACCTTTACCATCTT+TGG + chr4_1:67576534-67576553 None:intergenic 35.0%
AGGATATTGAAGGTGAATAC+TGG - chr4_1:67576588-67576607 Msa0566480:CDS 35.0%
CGATTTCTGTAGGTGTATTA+TGG - chr4_1:67576715-67576734 Msa0566480:intron 35.0%
TCAGTTAAGGATGATGTCTT+AGG + chr4_1:67576778-67576797 None:intergenic 35.0%
ATCTGAATCACTCTCAGTTA+AGG + chr4_1:67576791-67576810 None:intergenic 35.0%
TCAGATTTGTATGCTATGTC+TGG - chr4_1:67576805-67576824 Msa0566480:CDS 35.0%
TCAAAACATAATGCAGAACC+TGG + chr4_1:67576859-67576878 None:intergenic 35.0%
!! GGTTCTGCATTATGTTTTGA+AGG - chr4_1:67576859-67576878 Msa0566480:CDS 35.0%
!! ACTGCTTGTGTTGATTTGTT+TGG - chr4_1:67577289-67577308 Msa0566480:CDS 35.0%
TCACTTAATTATCTGCACTG+GGG - chr4_1:67577458-67577477 Msa0566480:CDS 35.0%
! GTACACCATACCATACTTTT+GGG + chr4_1:67577487-67577506 None:intergenic 35.0%
!!! TCCTCATTGCTGCTATTTTT+TGG - chr4_1:67577613-67577632 Msa0566480:CDS 35.0%
ACCAAAAAATAGCAGCAATG+AGG + chr4_1:67577617-67577636 None:intergenic 35.0%
ACCAAAATCACGATGACATT+TGG - chr4_1:67577748-67577767 Msa0566480:CDS 35.0%
! TCCAAATGTCATCGTGATTT+TGG + chr4_1:67577752-67577771 None:intergenic 35.0%
TCCTTCAATACTTAAGTCTG+AGG - chr4_1:67577872-67577891 Msa0566480:intron 35.0%
!! TCCTCAGACTTAAGTATTGA+AGG + chr4_1:67577876-67577895 None:intergenic 35.0%
TTCAATACTTAAGTCTGAGG+AGG - chr4_1:67577875-67577894 Msa0566480:intron 35.0%
CCATGCATAAACCAATCATA+TGG + chr4_1:67578014-67578033 None:intergenic 35.0%
!! CCATATGATTGGTTTATGCA+TGG - chr4_1:67578011-67578030 Msa0566480:CDS 35.0%
TAACAACTTATCATGGGACA+AGG + chr4_1:67578081-67578100 None:intergenic 35.0%
!! GTTGTTATTTGGATCTGCTA+AGG - chr4_1:67578094-67578113 Msa0566480:CDS 35.0%
TGTTCTTACCAATGCAGTTA+AGG - chr4_1:67578205-67578224 Msa0566480:CDS 35.0%
!! ATCCTTACTTTTGACAGACA+AGG - chr4_1:67578358-67578377 Msa0566480:intron 35.0%
ATCCTTGTCTGTCAAAAGTA+AGG + chr4_1:67578363-67578382 None:intergenic 35.0%
TTGACAGACAAGGATAATGA+TGG - chr4_1:67578368-67578387 Msa0566480:intron 35.0%
! GGATAATGATGGAAAAAGAG+AGG - chr4_1:67578379-67578398 Msa0566480:intron 35.0%
!! GTTGTTTTGCTCATGTGAAA+TGG - chr4_1:67578560-67578579 Msa0566480:intron 35.0%
! ACATTGGTTGAAGCATTAGA+AGG - chr4_1:67578627-67578646 Msa0566480:CDS 35.0%
TCATTAGTTCCTGTACAAGA+AGG + chr4_1:67578792-67578811 None:intergenic 35.0%
TTTCATGATGAGACTCTGAA+TGG + chr4_1:67578872-67578891 None:intergenic 35.0%
GAATGATACTATGTTGGTCA+TGG - chr4_1:67578938-67578957 Msa0566480:intron 35.0%
GGTCATGGACAATAAAGTTA+AGG - chr4_1:67578953-67578972 Msa0566480:intron 35.0%
CATGGACAATAAAGTTAAGG+AGG - chr4_1:67578956-67578975 Msa0566480:intron 35.0%
!! ACACTTATTGTGACGGATTT+CGG + chr4_1:67579054-67579073 None:intergenic 35.0%
ATGGAACACACTTATTGTGA+CGG + chr4_1:67579061-67579080 None:intergenic 35.0%
CAATAAGTGTGTTCCATATG+CGG - chr4_1:67579064-67579083 Msa0566480:intron 35.0%
!! CTAGTAACTTTTTCCGCATA+TGG + chr4_1:67579080-67579099 None:intergenic 35.0%
TTTCGAACATTAGTTGGACA+TGG + chr4_1:67579179-67579198 None:intergenic 35.0%
CCAACTAATGTTCGAAATTC+CGG - chr4_1:67579182-67579201 Msa0566480:intron 35.0%
TTTACAACCATCAAGTGTAC+CGG + chr4_1:67579204-67579223 None:intergenic 35.0%
CTGTTGTGTATGGAAAACAT+TGG - chr4_1:67579387-67579406 Msa0566480:CDS 35.0%
! GCTTTCTGTAACATCTTTTC+CGG - chr4_1:67579442-67579461 Msa0566480:CDS 35.0%
ACATAGTTACAGATGCTTGA+TGG + chr4_1:67579578-67579597 None:intergenic 35.0%
!!! ATTTCTTGGCCCTTTTTTCA+GGG - chr4_1:67579619-67579638 Msa0566480:CDS 35.0%
GGAATGATACCCTGAAAAAA+GGG + chr4_1:67579631-67579650 None:intergenic 35.0%
AGGAATGATACCCTGAAAAA+AGG + chr4_1:67579632-67579651 None:intergenic 35.0%
CTTAAAACAGAAACAAGGTC+AGG + chr4_1:67579652-67579671 None:intergenic 35.0%
ATAAATAAGCGCAAGAGTCT+CGG - chr4_1:67579870-67579889 Msa0566480:CDS 35.0%
! TGCATTACCTGAATAATGGA+TGG + chr4_1:67579966-67579985 None:intergenic 35.0%
ACGTCTATGGTACTAATGTT+AGG + chr4_1:67580034-67580053 None:intergenic 35.0%
CAAGTTAATTCTGGATCTTC+AGG - chr4_1:67580158-67580177 Msa0566480:intron 35.0%
! GATGACTCTAAGTTAACTTG+TGG - chr4_1:67580191-67580210 Msa0566480:CDS 35.0%
CAAATCGACACCAAAAAGTT+TGG + chr4_1:67580249-67580268 None:intergenic 35.0%
AAGTTCTCATTCGTTTGAAG+AGG - chr4_1:67580298-67580317 Msa0566480:intron 35.0%
! ACAGGTGTTTCACCGATTAT+AGG + chr4_1:67576001-67576020 None:intergenic 40.0%
!! TGTACTATAGATTTTGGCGG+TGG - chr4_1:67576063-67576082 Msa0566480:CDS 40.0%
CAAAGATGGGAACGTGTAAT+AGG - chr4_1:67576363-67576382 Msa0566480:CDS 40.0%
AGTGATGCCAAAGATGGTAA+AGG - chr4_1:67576524-67576543 Msa0566480:intron 40.0%
CCTTCAATATCCTCCAAAGA+CGG + chr4_1:67576581-67576600 None:intergenic 40.0%
AATAGAGAAACCGACTGATG+AGG - chr4_1:67576616-67576635 Msa0566480:CDS 40.0%
ATTTGTATGCTATGTCTGGC+TGG - chr4_1:67576809-67576828 Msa0566480:CDS 40.0%
TTTGAAGGAAGTGACATCTC+AGG - chr4_1:67576874-67576893 Msa0566480:CDS 40.0%
TTGAAGGAAGTGACATCTCA+GGG - chr4_1:67576875-67576894 Msa0566480:CDS 40.0%
TTAGTTCCATGGCTGTATGT+TGG - chr4_1:67576901-67576920 Msa0566480:CDS 40.0%
! TGTGCTTTTCCTCATTTTGC+TGG - chr4_1:67576926-67576945 Msa0566480:CDS 40.0%
! GTGCTTTTCCTCATTTTGCT+GGG - chr4_1:67576927-67576946 Msa0566480:CDS 40.0%
ACTACATACCCAGCAAAATG+AGG + chr4_1:67576938-67576957 None:intergenic 40.0%
ATCTTCAACATGCTGTTCCA+AGG + chr4_1:67577426-67577445 None:intergenic 40.0%
! GGTACACCATACCATACTTT+TGG + chr4_1:67577488-67577507 None:intergenic 40.0%
AAAGTATGGTATGGTGTACC+TGG - chr4_1:67577488-67577507 Msa0566480:CDS 40.0%
AAGTATGGTATGGTGTACCT+GGG - chr4_1:67577489-67577508 Msa0566480:CDS 40.0%
CATCTTCTATAGCTGAAGCA+TGG + chr4_1:67577517-67577536 None:intergenic 40.0%
CAGCTATAGAAGATGCAATG+AGG - chr4_1:67577522-67577541 Msa0566480:CDS 40.0%
GGTTGCTCTTCAAACAAATC+AGG + chr4_1:67577557-67577576 None:intergenic 40.0%
ACCAAATCTACTCAACGAGT+TGG - chr4_1:67577574-67577593 Msa0566480:CDS 40.0%
ACCAACTCGTTGAGTAGATT+TGG + chr4_1:67577578-67577597 None:intergenic 40.0%
TTCTGATCGCATCTTTGTAC+AGG - chr4_1:67577836-67577855 Msa0566480:intron 40.0%
TAACAAATTCCCCAGAATGC+TGG + chr4_1:67577920-67577939 None:intergenic 40.0%
TGAATGTGGCTCCATATGAT+TGG - chr4_1:67578000-67578019 Msa0566480:CDS 40.0%
CATGAAGAGTTGTCTCTGAA+AGG + chr4_1:67578133-67578152 None:intergenic 40.0%
CTTTCAGAGACAACTCTTCA+TGG - chr4_1:67578131-67578150 Msa0566480:CDS 40.0%
AGAAATGCTTGTGGGAAAGA+TGG - chr4_1:67578182-67578201 Msa0566480:CDS 40.0%
GGTTCAAATCAAAGAGGAGA+GGG + chr4_1:67578247-67578266 None:intergenic 40.0%
GAAAGGGGTTCAAATCAAAG+AGG + chr4_1:67578253-67578272 None:intergenic 40.0%
TGGAAAAAGAGAGGCTTGAA+TGG - chr4_1:67578388-67578407 Msa0566480:intron 40.0%
GATGGACAATGACTTCGATT+CGG - chr4_1:67578437-67578456 Msa0566480:intron 40.0%
!! AGTTGTTTCTGCTAGTGTTG+AGG - chr4_1:67578692-67578711 Msa0566480:CDS 40.0%
TTGCATGCACGAACAAGATA+TGG - chr4_1:67578719-67578738 Msa0566480:CDS 40.0%
AAAAGATCGCCTTCTTGTAC+AGG - chr4_1:67578780-67578799 Msa0566480:intron 40.0%
CTTGTACAGGAACTAATGAG+AGG - chr4_1:67578793-67578812 Msa0566480:intron 40.0%
TCTGAAGAAATGTGACTGTG+AGG + chr4_1:67578843-67578862 None:intergenic 40.0%
CAGTCACATTTCTTCAGAGT+TGG - chr4_1:67578845-67578864 Msa0566480:intron 40.0%
AACTTCTCGTACACCTTATG+TGG - chr4_1:67578890-67578909 Msa0566480:intron 40.0%
GACAACATAGAACTTAGTGC+TGG - chr4_1:67579122-67579141 Msa0566480:intron 40.0%
! AACATAGAACTTAGTGCTGG+TGG - chr4_1:67579125-67579144 Msa0566480:intron 40.0%
ACATTAGTTGGACATGGTGA+AGG + chr4_1:67579173-67579192 None:intergenic 40.0%
CCGGAATTTCGAACATTAGT+TGG + chr4_1:67579185-67579204 None:intergenic 40.0%
CTGCAAATGCACTCAGATTT+AGG - chr4_1:67579239-67579258 Msa0566480:intron 40.0%
!!! ACTTTTTCATTGGGGAGCTT+TGG + chr4_1:67579334-67579353 None:intergenic 40.0%
!! TTCGGTTGAGCTTGTTAGTT+TGG - chr4_1:67579361-67579380 Msa0566480:CDS 40.0%
!! TCGGTTGAGCTTGTTAGTTT+GGG - chr4_1:67579362-67579381 Msa0566480:CDS 40.0%
! AGTTTGGGATCTGTTGTGTA+TGG - chr4_1:67579377-67579396 Msa0566480:CDS 40.0%
!! GTTACAGAAAGCGTACCTTT+TGG + chr4_1:67579434-67579453 None:intergenic 40.0%
!!! GATTTCTTGGCCCTTTTTTC+AGG - chr4_1:67579618-67579637 Msa0566480:CDS 40.0%
TGTTTGTGAAAACCTCGTTG+GGG + chr4_1:67579800-67579819 None:intergenic 40.0%
GTGTTTGTGAAAACCTCGTT+GGG + chr4_1:67579801-67579820 None:intergenic 40.0%
ATCCCAGTCATGAATGTGTA+GGG - chr4_1:67580120-67580139 Msa0566480:intron 40.0%
TACCCTACACATTCATGACT+GGG + chr4_1:67580125-67580144 None:intergenic 40.0%
GGTTCAAGTAATAGCTCTCT+AGG - chr4_1:67580212-67580231 Msa0566480:CDS 40.0%
!! TGGTGTCGATTTGATAAAGC+TGG - chr4_1:67580256-67580275 Msa0566480:intron 40.0%
!! TGTCGATTTGATAAAGCTGG+AGG - chr4_1:67580259-67580278 Msa0566480:intron 40.0%
GTTCTGATGCACAATTGACT+CGG - chr4_1:67580393-67580412 Msa0566480:intron 40.0%
AACAAGACACGTGCTCAACA+CGG + chr4_1:67575810-67575829 None:intergenic 45.0%
TCCCATCTGGATGATATCTG+CGG + chr4_1:67575959-67575978 None:intergenic 45.0%
GAAGCATGTCGGCCTATAAT+CGG - chr4_1:67575986-67576005 Msa0566480:CDS 45.0%
TAGGAGTTTGAAGACACGCT+TGG - chr4_1:67576128-67576147 Msa0566480:intron 45.0%
CTAAGGGACGTATCTTAGCT+AGG + chr4_1:67576157-67576176 None:intergenic 45.0%
ATGCCATACGGTTCAGCTAA+GGG + chr4_1:67576173-67576192 None:intergenic 45.0%
TATGCCATACGGTTCAGCTA+AGG + chr4_1:67576174-67576193 None:intergenic 45.0%
TCTTTCTCCTTAAGAGGGCA+AGG + chr4_1:67576230-67576249 None:intergenic 45.0%
!! TCAACTTGCTGAATACGGGT+CGG + chr4_1:67576275-67576294 None:intergenic 45.0%
!!! TTTTCTTCCTCATCGGCTCT+CGG + chr4_1:67576310-67576329 None:intergenic 45.0%
AGCCGATGAGGAAGAAAAGT+AGG - chr4_1:67576312-67576331 Msa0566480:CDS 45.0%
GCCGATGAGGAAGAAAAGTA+GGG - chr4_1:67576313-67576332 Msa0566480:CDS 45.0%
!! GCCCTACTTTTCTTCCTCAT+CGG + chr4_1:67576317-67576336 None:intergenic 45.0%
TGAGGAAGAAAAGTAGGGCA+AGG - chr4_1:67576318-67576337 Msa0566480:CDS 45.0%
ACGTGGAAAGCAGTCAAAGA+TGG - chr4_1:67576349-67576368 Msa0566480:CDS 45.0%
CGTGGAAAGCAGTCAAAGAT+GGG - chr4_1:67576350-67576369 Msa0566480:CDS 45.0%
GGAACGTGTAATAGGAGAAC+TGG - chr4_1:67576371-67576390 Msa0566480:CDS 45.0%
! CCGTCTTTGGAGGATATTGA+AGG - chr4_1:67576578-67576597 Msa0566480:CDS 45.0%
ATTACCTCGACCTCATCAGT+CGG + chr4_1:67576629-67576648 None:intergenic 45.0%
GGTGTATTATGGAGCTGACT+TGG - chr4_1:67576726-67576745 Msa0566480:intron 45.0%
!! TATGGAGCTGACTTGGAAAC+TGG - chr4_1:67576733-67576752 Msa0566480:intron 45.0%
AATAACTTTGCGCGACTTCC+AGG - chr4_1:67576838-67576857 Msa0566480:CDS 45.0%
TGAAGGAAGTGACATCTCAG+GGG - chr4_1:67576876-67576895 Msa0566480:CDS 45.0%
!!! TCTCAGGGGTTTTAGTTCCA+TGG - chr4_1:67576890-67576909 Msa0566480:CDS 45.0%
CACATTCCAACATACAGCCA+TGG + chr4_1:67576910-67576929 None:intergenic 45.0%
! GGTGACCCAAAAGTATGGTA+TGG - chr4_1:67577479-67577498 Msa0566480:CDS 45.0%
! GCAGCAATGAGGAAAGTACA+AGG + chr4_1:67577606-67577625 None:intergenic 45.0%
CATGGGACAAGGATGTCTTA+CGG + chr4_1:67578070-67578089 None:intergenic 45.0%
TCTGCTAAGGAAGCTGTACA+TGG - chr4_1:67578107-67578126 Msa0566480:CDS 45.0%
GGGTTCAAATCAAAGAGGAG+AGG + chr4_1:67578248-67578267 None:intergenic 45.0%
!! CAATGACTTCGATTCGGTTG+AGG - chr4_1:67578443-67578462 Msa0566480:intron 45.0%
!! ACTTCGATTCGGTTGAGGAA+AGG - chr4_1:67578448-67578467 Msa0566480:intron 45.0%
!! CTTCGATTCGGTTGAGGAAA+GGG - chr4_1:67578449-67578468 Msa0566480:intron 45.0%
GCGTGGGAAACTAGAAACAT+TGG - chr4_1:67578669-67578688 Msa0566480:CDS 45.0%
ACACCTTATGTGGATCTGAC+TGG - chr4_1:67578900-67578919 Msa0566480:intron 45.0%
TCACCAGTCAGATCCACATA+AGG + chr4_1:67578906-67578925 None:intergenic 45.0%
TGTGGATCTGACTGGTGATA+TGG - chr4_1:67578908-67578927 Msa0566480:intron 45.0%
! TGCTGGTGGTATTTCTGTCT+TGG - chr4_1:67579139-67579158 Msa0566480:intron 45.0%
CGAAATTCCGGTACACTTGA+TGG - chr4_1:67579194-67579213 Msa0566480:intron 45.0%
GTTTGTGAAGTCATTCCTGC+TGG - chr4_1:67579596-67579615 Msa0566480:CDS 45.0%
GTCATTCCTGCTGGATTTCT+TGG - chr4_1:67579605-67579624 Msa0566480:CDS 45.0%
GGTGTTCTTCCAAAGTAACC+TGG + chr4_1:67579779-67579798 None:intergenic 45.0%
GGTGTTTGTGAAAACCTCGT+TGG + chr4_1:67579802-67579821 None:intergenic 45.0%
ATGTTGTGCAGTAGCTCCAA+GGG + chr4_1:67579912-67579931 None:intergenic 45.0%
GAGCTACTGCACAACATCAA+TGG - chr4_1:67579915-67579934 Msa0566480:CDS 45.0%
!! CCTGAATAATGGATGGCGAA+AGG + chr4_1:67579959-67579978 None:intergenic 45.0%
CCTTTCGCCATCCATTATTC+AGG - chr4_1:67579956-67579975 Msa0566480:CDS 45.0%
ACTGGGATCTTGAGCTTCAA+TGG + chr4_1:67580108-67580127 None:intergenic 45.0%
GATCCCAGTCATGAATGTGT+AGG - chr4_1:67580119-67580138 Msa0566480:intron 45.0%
GTACCCTACACATTCATGAC+TGG + chr4_1:67580126-67580145 None:intergenic 45.0%
GTCATGAATGTGTAGGGTAC+TGG - chr4_1:67580126-67580145 Msa0566480:intron 45.0%
! GACTCGAGGACCAAACTTTT+TGG - chr4_1:67580236-67580255 Msa0566480:intron 45.0%
CGATTTGATAAAGCTGGAGG+AGG - chr4_1:67580262-67580281 Msa0566480:intron 45.0%
TCTGGATGATATCTGCGGCA+TGG + chr4_1:67575954-67575973 None:intergenic 50.0%
TGCCGCAGATATCATCCAGA+TGG - chr4_1:67575954-67575973 Msa0566480:CDS 50.0%
GCCGCAGATATCATCCAGAT+GGG - chr4_1:67575955-67575974 Msa0566480:CDS 50.0%
AAATTGTCCCTCCAGCTTGC+TGG - chr4_1:67576198-67576217 Msa0566480:intron 50.0%
! AATTGTCCCTCCAGCTTGCT+GGG - chr4_1:67576199-67576218 Msa0566480:intron 50.0%
TTCTCCTTAAGAGGGCAAGG+TGG + chr4_1:67576227-67576246 None:intergenic 50.0%
AGGGCAAGGAAACGAAAACG+TGG - chr4_1:67576332-67576351 Msa0566480:CDS 50.0%
GGGTTGAGTGATGCCAAAGA+TGG - chr4_1:67576518-67576537 Msa0566480:intron 50.0%
! GACTTGGAAACTGGAGCACT+TGG - chr4_1:67576742-67576761 Msa0566480:intron 50.0%
! GAAACTGGAGCACTTGGAAG+TGG - chr4_1:67576748-67576767 Msa0566480:intron 50.0%
AGGAGCAGGGAATGAAAACG+CGG + chr4_1:67577406-67577425 None:intergenic 50.0%
! CGTTTTCATTCCCTGCTCCT+TGG - chr4_1:67577406-67577425 Msa0566480:CDS 50.0%
ACATGCTGTTCCAAGGAGCA+GGG + chr4_1:67577419-67577438 None:intergenic 50.0%
AACATGCTGTTCCAAGGAGC+AGG + chr4_1:67577420-67577439 None:intergenic 50.0%
ACTGGGGTGACCCAAAAGTA+TGG - chr4_1:67577474-67577493 Msa0566480:CDS 50.0%
TATCGCACTGTCCAGCATTC+TGG - chr4_1:67577906-67577925 Msa0566480:intron 50.0%
ATCGCACTGTCCAGCATTCT+GGG - chr4_1:67577907-67577926 Msa0566480:intron 50.0%
! TTTCCAAGGGCATACCACTG+TGG - chr4_1:67577945-67577964 Msa0566480:intron 50.0%
CAGTGGCTTCAATTGTGCAG+AGG - chr4_1:67577974-67577993 Msa0566480:intron 50.0%
TTGTGCAGAGGCTGTGAATG+TGG - chr4_1:67577986-67578005 Msa0566480:intron 50.0%
AGAGAGGCTTGAATGGCTTC+CGG - chr4_1:67578395-67578414 Msa0566480:intron 50.0%
ACTCACAACCAACAGCAGAG+AGG + chr4_1:67578503-67578522 None:intergenic 50.0%
AACCACGTGCAATAGAAGCG+TGG - chr4_1:67578652-67578671 Msa0566480:CDS 50.0%
! ACCACGTGCAATAGAAGCGT+GGG - chr4_1:67578653-67578672 Msa0566480:CDS 50.0%
ATGTGACTGTGAGGACTGCT+AGG + chr4_1:67578834-67578853 None:intergenic 50.0%
AAAGGGCCAAGAAATCCAGC+AGG + chr4_1:67579614-67579633 None:intergenic 50.0%
TTTGGAAGAACACCCCAACG+AGG - chr4_1:67579785-67579804 Msa0566480:CDS 50.0%
ACACCTCAGCAGATAAGTGC+TGG - chr4_1:67579817-67579836 Msa0566480:CDS 50.0%
CACCTCAGCAGATAAGTGCT+GGG - chr4_1:67579818-67579837 Msa0566480:CDS 50.0%
TTCCCAGCACTTATCTGCTG+AGG + chr4_1:67579823-67579842 None:intergenic 50.0%
TGAACTAGACATGCCTCCCT+TGG - chr4_1:67579893-67579912 Msa0566480:CDS 50.0%
GATGTTGTGCAGTAGCTCCA+AGG + chr4_1:67579913-67579932 None:intergenic 50.0%
ATAGCTCTCTAGGTGACTCG+AGG - chr4_1:67580222-67580241 Msa0566480:CDS 50.0%
AAGCTGGAGGAGGATGACAT+AGG - chr4_1:67580272-67580291 Msa0566480:intron 50.0%
! CGTCAGGACTTCCCTTTTTC+AGG + chr4_1:67580346-67580365 None:intergenic 50.0%
!! CTGATGCACAATTGACTCGG+TGG - chr4_1:67580396-67580415 Msa0566480:intron 50.0%
TCTATCAGCACTTTCAGCGC+AGG + chr4_1:67580425-67580444 None:intergenic 50.0%
TGCTTCGACTGGATCCCATC+TGG + chr4_1:67575972-67575991 None:intergenic 55.0%
GGGATCCAGTCGAAGCATGT+CGG - chr4_1:67575975-67575994 Msa0566480:CDS 55.0%
ATAGGCCGACATGCTTCGAC+TGG + chr4_1:67575983-67576002 None:intergenic 55.0%
CGTCCCTTAGCTGAACCGTA+TGG - chr4_1:67576167-67576186 Msa0566480:intron 55.0%
TTCAGAACCGAGAGCCGATG+AGG - chr4_1:67576300-67576319 Msa0566480:CDS 55.0%
GTGTGAAGTCTGGCCCTGAT+TGG + chr4_1:67576451-67576470 None:intergenic 55.0%
AAGACGGTTCACGTCTCTCG+TGG + chr4_1:67576565-67576584 None:intergenic 55.0%
CGAGAGACGTGAACCGTCTT+TGG - chr4_1:67576565-67576584 Msa0566480:CDS 55.0%
GAGACGTGAACCGTCTTTGG+AGG - chr4_1:67576568-67576587 Msa0566480:CDS 55.0%
GAAACCGACTGATGAGGTCG+AGG - chr4_1:67576622-67576641 Msa0566480:CDS 55.0%
ATAGCTGAAGCATGGCTCCC+AGG + chr4_1:67577509-67577528 None:intergenic 55.0%
TGCTGGACAGTGCGATACAC+AGG + chr4_1:67577903-67577922 None:intergenic 55.0%
TCGCACTGTCCAGCATTCTG+GGG - chr4_1:67577908-67577927 Msa0566480:intron 55.0%
AAGCCACAGTGGTATGCCCT+TGG + chr4_1:67577951-67577970 None:intergenic 55.0%
TACCACTGTGGCTTCAGCAG+TGG - chr4_1:67577957-67577976 Msa0566480:intron 55.0%
GACTTGCACCTCTCTGCTGT+TGG - chr4_1:67578492-67578511 Msa0566480:intron 55.0%
TCCCACGCTTCTATTGCACG+TGG + chr4_1:67578657-67578676 None:intergenic 55.0%
TTGTGCAGTAGCTCCAAGGG+AGG + chr4_1:67579909-67579928 None:intergenic 55.0%
CGCATTGCTCGTAACTCGTC+AGG + chr4_1:67580362-67580381 None:intergenic 55.0%
GGCTCCACCTTGCCCTCTTA+AGG - chr4_1:67576220-67576239 Msa0566480:intron 60.0%
AGCCACTGCTGAAGCCACAG+TGG + chr4_1:67577962-67577981 None:intergenic 60.0%
GTGGAGCCCAGCAAGCTGGA+GGG + chr4_1:67576208-67576227 None:intergenic 65.0%
CAAGGTGGAGCCCAGCAAGC+TGG + chr4_1:67576212-67576231 None:intergenic 65.0%
GGTGGAGCCCAGCAAGCTGG+AGG + chr4_1:67576209-67576228 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 67575745 67580469 67575745 ID=Msa0566480;Name=Msa0566480
chr4_1 mRNA 67575745 67580469 67575745 ID=Msa0566480-mRNA-1;Parent=Msa0566480;Name=Msa0566480-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.22|0.1|1|0.88|0.7|10|0|1057
chr4_1 exon 67580425 67580469 67580425 ID=Msa0566480-mRNA-1:exon:22182;Parent=Msa0566480-mRNA-1
chr4_1 exon 67580175 67580252 67580175 ID=Msa0566480-mRNA-1:exon:22181;Parent=Msa0566480-mRNA-1
chr4_1 exon 67579571 67580083 67579571 ID=Msa0566480-mRNA-1:exon:22180;Parent=Msa0566480-mRNA-1
chr4_1 exon 67579266 67579487 67579266 ID=Msa0566480-mRNA-1:exon:22179;Parent=Msa0566480-mRNA-1
chr4_1 exon 67578619 67578780 67578619 ID=Msa0566480-mRNA-1:exon:22178;Parent=Msa0566480-mRNA-1
chr4_1 exon 67577988 67578356 67577988 ID=Msa0566480-mRNA-1:exon:22177;Parent=Msa0566480-mRNA-1
chr4_1 exon 67576777 67577839 67576777 ID=Msa0566480-mRNA-1:exon:22176;Parent=Msa0566480-mRNA-1
chr4_1 exon 67576557 67576677 67576557 ID=Msa0566480-mRNA-1:exon:22175;Parent=Msa0566480-mRNA-1
chr4_1 exon 67576237 67576471 67576237 ID=Msa0566480-mRNA-1:exon:22174;Parent=Msa0566480-mRNA-1
chr4_1 exon 67575745 67576110 67575745 ID=Msa0566480-mRNA-1:exon:22173;Parent=Msa0566480-mRNA-1
chr4_1 CDS 67580425 67580469 67580425 ID=Msa0566480-mRNA-1:cds;Parent=Msa0566480-mRNA-1
chr4_1 CDS 67580175 67580252 67580175 ID=Msa0566480-mRNA-1:cds;Parent=Msa0566480-mRNA-1
chr4_1 CDS 67579571 67580083 67579571 ID=Msa0566480-mRNA-1:cds;Parent=Msa0566480-mRNA-1
chr4_1 CDS 67579266 67579487 67579266 ID=Msa0566480-mRNA-1:cds;Parent=Msa0566480-mRNA-1
chr4_1 CDS 67578619 67578780 67578619 ID=Msa0566480-mRNA-1:cds;Parent=Msa0566480-mRNA-1
chr4_1 CDS 67577988 67578356 67577988 ID=Msa0566480-mRNA-1:cds;Parent=Msa0566480-mRNA-1
chr4_1 CDS 67576777 67577839 67576777 ID=Msa0566480-mRNA-1:cds;Parent=Msa0566480-mRNA-1
chr4_1 CDS 67576557 67576677 67576557 ID=Msa0566480-mRNA-1:cds;Parent=Msa0566480-mRNA-1
chr4_1 CDS 67576237 67576471 67576237 ID=Msa0566480-mRNA-1:cds;Parent=Msa0566480-mRNA-1
chr4_1 CDS 67575745 67576110 67575745 ID=Msa0566480-mRNA-1:cds;Parent=Msa0566480-mRNA-1
Gene Sequence

>Msa0566480

ATGGAAAATACACTTGAATCTTCCATCAATCCACAACACAAAAAGATATCATCCAGATGGGATCCAGTCGAAGCATGTCGGCCTATAATCGGTGAAACACCTGTGTTTTATCCAACATTTGAGGAGTTTGAAGACACGCTTGGTTACCTAGCTAAGATACGTCCCTTAGCTGAACCGTATGGCATATGTAAAATTGTCCCTCCAGCTTGCTGGGCTCCACCTTGCCCTCTTAAGGAGAAAGAGATATGGGAAAATGCTAAATTTCCGACCCGTATTCAGCAAGTTGATTTGCTTCAGAACCGAGAGCCGATGAGGAAGAAAAGTAGGGCAAGGAAACGAAAACGTGGAAAGCAGTCAAAGATGGGAACGTGTAATAGGAGAACTGGAAATTCATGTTCTGAAGCTAATGCTACTTCTGAATCTGATGATAAGTTTGGATTCCAATCAGGGCCAGACTTCACACTCAAAGAATTTCAGCAATATGGAAATTCTTTTAAAGATTGCTACTTCGGGTTGAGTGATGCCAAAGATGGTAAAGGTAGTGATAATAATCACCACGAGAGACGTGAACCGTCTTTGGAGGATATTGAAGGTGAATACTGGCGAATAATAGAGAAACCGACTGATGAGGTCGAGGTGTATTATGGAGCTGACTTGGAAACTGGAGCACTTGGAAGTGGTTTTCCTAAGACATCATCCTTAACTGAGAGTGATTCAGATTTGTATGCTATGTCTGGCTGGAATTTGAATAACTTTGCGCGACTTCCAGGTTCTGCATTATGTTTTGAAGGAAGTGACATCTCAGGGGTTTTAGTTCCATGGCTGTATGTTGGAATGTGCTTTTCCTCATTTTGCTGGCATGTTGAAGATCATCACCTCTATTCACTTAATTATCTGCACTGGGGTGACCCAAAAGTATGGTATGGTGTACCTGGGAGCCATGCTTCAGCTATAGAAGATGCAATGAGGAAACATTTGCCTGATTTGTTTGAAGAGCAACCAAATCTACTCAACGAGTTGGTGACTCAGTTCTCTCCTTCAATACTTAAGTCTGAGGAGGTTCCTGTGTATCGCACTGTCCAGCATTCTGGGGAATTTGTTATCACGTTTCCAAGGGCATACCACTGTGGCTTCAGCAGTGGCTTCAATTGTGCAGAGGCTGTGAATGTGGCTCCATATGATTGGTTTATGCATGGTCAGAACGCTGCAGAGATTTACAGTCTACAGTGCCGTAAGACATCCTTGTCCCATGATAAGTTGTTATTTGGATCTGCTAAGGAAGCTGTACATGGCCTTTCAGAGACAACTCTTCATGGAAAAGAAAATCTAAAATGTTTAAATTGGAGAAATGCTTGTGGGAAAGATGGTGTTCTTACCAATGCAGTTAAGACAAGGATAATGATGGAAAAAGAGAGGCTTGAATGGCTTCCGGATCATTTAAAGATGCTGAAGATGGACAATGACTTCGATTCGGTTGAGGAAAGGGAATGTTACTATTGCTTCTATGACTTGCACCTCTCTGCTGTTGGTTGTGAGTGCTTTCCTGATAACTATTCTTGTCTTAGACATTTCAAGTTGTTTTGCTCATGTGAAATGGATAAAAGATTTGTTCTGGTTCGTTATACAATAGATGAGCTAAGTACATTGGTTGAAGCATTAGAAGGAGAACCACGTGCAATAGAAGCGTGGGAAACTAGAAACATTGGAGTTGTTTCTGCTAGTGTTGAGGATGCTTGCATGCACGAACAAGATATGGAGAGAGTCATGTGCAAAACTGAGAATTACAAAGAAGGGAAAAGATCGCCTTCTTGTACAGGAACTAATGAGAGGTTAAATTCAAATTTACCTAGCAGTCCTCACAGTCACATTTCTTCAGAGTTGGTCCATTCAGAGTCTCATCATGAAACTTCTCGTACACCTTATGTGGATCTGACTGGTGATATGGACAACTTGAATGATACTATGTTGGTCATGGACAATAAAGTTAAGGAGGATAAGGGAAGTTCTTTGTATTTGAATATTGGTGATATCTCTGATAAACCTGCAAATTCTTTGCTAAATATAGCCGAAATCCGTCACAATAAGTGTGTTCCATATGCGGAAAAAGTTACTAGTGCAGAGATCAGAAAAGAACGAGACAACATAGAACTTAGTGCTGGTGGTATTTCTGTCTTGGAAAATGAACCTTCACCATGTCCAACTAATGTTCGAAATTCCGGTACACTTGATGGTTGTAAATTGTTTGGTGTCAATCTGCAAATGCACTCAGATTTAGGACAGAAACTTAATAGTATGCTTGAAACGGGAGTTCTAGACACCTCCAATACAAATATATCTTTGACAAACCAAAGCTCCCCAATGAAAAAGTTTAGTATTTCGGTTGAGCTTGTTAGTTTGGGATCTGTTGTGTATGGAAAACATTGGTGCAGTAAGCATGCAATATATCCAAAAGGATTCAAGAGTCGTGTAAAGTTCTTTAGCATTCTTGATCCATCAAGCATCTGTAACTATGTTTGTGAAGTCATTCCTGCTGGATTTCTTGGCCCTTTTTTCAGGGTATCATTCCTGACCTTTATATTTCTTTCTCTTTCAATAAAAAATATATTCCAGGTTACTTTGGAAGAACACCCCAACGAGGTTTTCACAAACACCTCAGCAGATAAGTGCTGGGAATCTGTTATTGATAGACTAAACTACGAAATAAATAAGCGCAAGAGTCTCGGTGAACTAGACATGCCTCCCTTGGAGCTACTGCACAACATCAATGGTCATAAAATGTTTGGATTCCTTTCGCCATCCATTATTCAGTCCATTGAAGCTCAAGATCCCAGTCATGAATGTGTAGGGTACTGGAATCACAAACAAGTTAATTCTGGATCTTCAGGCAAAGCCATTGATGACTCTAAGTTAACTTGTGGTTCAAGTAATAGCTCTCTAGGTGACTCGAGGACCAAACTTTTTGGTGTCGATTTGATAAAGCTGGAGGAGGATGACATAGGAGAAAGTTCTCATTCGTTTGAAGAGGTGAAGTTGATTCTAGAAAGATTCCTGAAAAAGGGAAGTCCTGACGAGTTACGAGCAATGCGTCAGTTATTCAGTTCTGATGCACAATTGACTCGGTGGAGACCTGCGCTGAAAGTGCTGATAGAGAAAATCCAGAAAGATTGTGAATAA
Protein sequence

>Msa0566480

MENTLESSINPQHKKISSRWDPVEACRPIIGETPVFYPTFEEFEDTLGYLAKIRPLAEPYGICKIVPPACWAPPCPLKEKEIWENAKFPTRIQQVDLLQNREPMRKKSRARKRKRGKQSKMGTCNRRTGNSCSEANATSESDDKFGFQSGPDFTLKEFQQYGNSFKDCYFGLSDAKDGKGSDNNHHERREPSLEDIEGEYWRIIEKPTDEVEVYYGADLETGALGSGFPKTSSLTESDSDLYAMSGWNLNNFARLPGSALCFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHASAIEDAMRKHLPDLFEEQPNLLNELVTQFSPSILKSEEVPVYRTVQHSGEFVITFPRAYHCGFSSGFNCAEAVNVAPYDWFMHGQNAAEIYSLQCRKTSLSHDKLLFGSAKEAVHGLSETTLHGKENLKCLNWRNACGKDGVLTNAVKTRIMMEKERLEWLPDHLKMLKMDNDFDSVEERECYYCFYDLHLSAVGCECFPDNYSCLRHFKLFCSCEMDKRFVLVRYTIDELSTLVEALEGEPRAIEAWETRNIGVVSASVEDACMHEQDMERVMCKTENYKEGKRSPSCTGTNERLNSNLPSSPHSHISSELVHSESHHETSRTPYVDLTGDMDNLNDTMLVMDNKVKEDKGSSLYLNIGDISDKPANSLLNIAEIRHNKCVPYAEKVTSAEIRKERDNIELSAGGISVLENEPSPCPTNVRNSGTLDGCKLFGVNLQMHSDLGQKLNSMLETGVLDTSNTNISLTNQSSPMKKFSISVELVSLGSVVYGKHWCSKHAIYPKGFKSRVKFFSILDPSSICNYVCEVIPAGFLGPFFRVSFLTFIFLSLSIKNIFQVTLEEHPNEVFTNTSADKCWESVIDRLNYEINKRKSLGELDMPPLELLHNINGHKMFGFLSPSIIQSIEAQDPSHECVGYWNHKQVNSGSSGKAIDDSKLTCGSSNSSLGDSRTKLFGVDLIKLEEDDIGESSHSFEEVKLILERFLKKGSPDELRAMRQLFSSDAQLTRWRPALKVLIEKIQKDCE*