Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568350 | XP_024629481.1 | 93.805 | 791 | 17 | 8 | 1 | 787 | 1 | 763 | 0.0 | 1474 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568350 | sp|O94481|TFC5_SCHPO | 34.109 | 129 | 70 | 4 | 561 | 689 | 321 | 434 | 2.19e-13 | 77.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568350 | A0A396GS65 | 93.805 | 791 | 17 | 8 | 1 | 787 | 1 | 763 | 0.0 | 1474 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0568350 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568350 | MtrunA17_Chr8g0383101 | 93.805 | 791 | 17 | 8 | 1 | 787 | 1 | 763 | 0.0 | 1474 |
| Msa0568350 | MtrunA17_Chr4g0033581 | 53.941 | 406 | 148 | 11 | 389 | 787 | 132 | 505 | 2.16e-100 | 320 |
| Msa0568350 | MtrunA17_Chr4g0033581 | 34.884 | 172 | 70 | 6 | 3 | 170 | 2 | 135 | 2.26e-11 | 67.0 |
| Msa0568350 | MtrunA17_Chr8g0383111 | 68.696 | 115 | 36 | 0 | 383 | 497 | 46 | 160 | 8.89e-30 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568350 | AT4G39160.1 | 37.984 | 258 | 130 | 4 | 458 | 708 | 287 | 521 | 9.06e-44 | 168 |
| Msa0568350 | AT4G39160.3 | 37.984 | 258 | 130 | 4 | 458 | 708 | 287 | 521 | 9.06e-44 | 168 |
| Msa0568350 | AT4G39160.2 | 27.907 | 559 | 313 | 16 | 188 | 708 | 15 | 521 | 1.48e-43 | 167 |
Find 173 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATATTCCTAACCCTTTC+CGG | 0.169829 | 4_1:+69969486 | None:intergenic |
| TGTTGATGCGCTTGTCTTCT+TGG | 0.180256 | 4_1:+69968038 | None:intergenic |
| CCGATTCCTCTTCTCATTTC+CGG | 0.203819 | 4_1:-69970848 | Msa0568350:five_prime_UTR |
| CTTCTATTATCTTCAGAAAA+TGG | 0.204672 | 4_1:+69969213 | None:intergenic |
| GAAGAAATCAGTGGCTAAAA+AGG | 0.211844 | 4_1:-69968007 | Msa0568350:CDS |
| TCCTAACCCTTTCCGGTTCC+AGG | 0.250680 | 4_1:+69969493 | None:intergenic |
| ATCAACGAACAATACCTATT+AGG | 0.275169 | 4_1:-69967761 | Msa0568350:CDS |
| CCCTTTCCGGTTCCAGGATC+AGG | 0.297732 | 4_1:+69969499 | None:intergenic |
| ACTCTGAAGGCATAGCATTC+AGG | 0.302380 | 4_1:+69969157 | None:intergenic |
| TCTAGGTCGTGGCTTAATCT+TGG | 0.307370 | 4_1:+69969384 | None:intergenic |
| GACCCTCCTTATGTTATTGA+TGG | 0.314436 | 4_1:-69968108 | Msa0568350:CDS |
| ATTGAATTACCAGTCTTTCA+TGG | 0.319869 | 4_1:-69966429 | Msa0568350:CDS |
| TGGATCAATGCCAGATTTCA+TGG | 0.322835 | 4_1:+69968492 | None:intergenic |
| ATAACTTTGATTTGAAAGTT+TGG | 0.329409 | 4_1:-69964656 | None:intergenic |
| TCAGCCAATGTGGGACTATC+TGG | 0.334761 | 4_1:+69968430 | None:intergenic |
| ACAGAAACAAAATTCTAATA+AGG | 0.334895 | 4_1:-69965899 | Msa0568350:CDS |
| TCTTGACAGCAACAAGAGTT+TGG | 0.341051 | 4_1:-69969776 | Msa0568350:CDS |
| GCGGGCTTCAAAAGCGCTTC+AGG | 0.341307 | 4_1:-69969718 | Msa0568350:CDS |
| TCAACGAACAATACCTATTA+GGG | 0.342822 | 4_1:-69967760 | Msa0568350:CDS |
| GATGCCTCAGATTTAATGAT+AGG | 0.358895 | 4_1:-69965859 | Msa0568350:CDS |
| ATATAGGCTATTAGGCAGTT+TGG | 0.359903 | 4_1:-69966225 | Msa0568350:intron |
| AGTAAAATAATATCCCTAAT+AGG | 0.364611 | 4_1:+69967747 | None:intergenic |
| TTGTAACCTCAAATCTCAAA+TGG | 0.372403 | 4_1:+69964842 | None:intergenic |
| CATGAACCTTCCCCATTTGT+AGG | 0.380142 | 4_1:+69969799 | None:intergenic |
| CAAATGGGACAATAGTAAAA+TGG | 0.381145 | 4_1:+69964858 | None:intergenic |
| CATAAAATATCTTCTATTGC+TGG | 0.387802 | 4_1:-69968237 | Msa0568350:CDS |
| AAAGACTGGTAATTCAATAA+AGG | 0.392051 | 4_1:+69966434 | None:intergenic |
| TAAAGATCAAGAAGATTCTA+TGG | 0.395924 | 4_1:-69965057 | Msa0568350:CDS |
| AGTGTTAGTGTACCTTTGAT+TGG | 0.396209 | 4_1:+69967570 | None:intergenic |
| TCAATGGGGCAGTCAGGATC+AGG | 0.398869 | 4_1:+69968538 | None:intergenic |
| TTTGTCAAGCCTTCATGCCT+TGG | 0.399449 | 4_1:+69968457 | None:intergenic |
| GCTTCTGCTTCTGCTTCATC+TGG | 0.399801 | 4_1:-69969340 | Msa0568350:intron |
| TGTGCGCAAACCTTAGTTCC+AGG | 0.400334 | 4_1:+69965817 | None:intergenic |
| AACAAAGAACTGCCTACAAA+TGG | 0.403333 | 4_1:-69969811 | Msa0568350:CDS |
| AGTGATGTCCTCCCTGATCC+TGG | 0.404496 | 4_1:-69969511 | Msa0568350:CDS |
| TCGTCAGATTGCTCTGGAAC+TGG | 0.405106 | 4_1:+69965029 | None:intergenic |
| TGCCTTGGAGTTTCAGATGT+TGG | 0.405235 | 4_1:+69968472 | None:intergenic |
| CTAGGTCGTGGCTTAATCTT+GGG | 0.405320 | 4_1:+69969385 | None:intergenic |
| CAAACCTTAGTTCCAGGTGT+TGG | 0.407219 | 4_1:+69965823 | None:intergenic |
| CTTAAATCTTTCAATGTGAA+TGG | 0.409452 | 4_1:-69968744 | Msa0568350:CDS |
| AGCATTATGAGAATCATGTT+TGG | 0.410582 | 4_1:+69970449 | None:intergenic |
| ACAAGGCACCTAGGGGAAAA+TGG | 0.411092 | 4_1:-69966406 | Msa0568350:CDS |
| GGTGGTCTGGGCTTAGCCTT+AGG | 0.414025 | 4_1:+69970573 | None:intergenic |
| GATTATCAATCCATGAAATC+TGG | 0.414632 | 4_1:-69968502 | Msa0568350:CDS |
| CATAGTGGACAAGGCTCTGC+TGG | 0.417669 | 4_1:-69967799 | Msa0568350:intron |
| AGAGGTTGCAACAGCTGAGC+AGG | 0.420001 | 4_1:-69965099 | Msa0568350:CDS |
| CTCTGAAGGCATAGCATTCA+GGG | 0.422534 | 4_1:+69969158 | None:intergenic |
| GCATTATGAGAATCATGTTT+GGG | 0.424036 | 4_1:+69970450 | None:intergenic |
| CAAAAGTAGGTCGGAAATAC+AGG | 0.424081 | 4_1:-69968685 | Msa0568350:intron |
| GAGAGGCAGGTTTGCGCCTA+AGG | 0.424149 | 4_1:-69970589 | Msa0568350:CDS |
| AAACCTTAGTTCCAGGTGTT+GGG | 0.426302 | 4_1:+69965824 | None:intergenic |
| ACAAAGAACTGCCTACAAAT+GGG | 0.438146 | 4_1:-69969810 | Msa0568350:CDS |
| ACATTGAAAGATTTAAGATC+TGG | 0.441714 | 4_1:+69968750 | None:intergenic |
| GTCCTCCCTGATCCTGGAAC+CGG | 0.446592 | 4_1:-69969505 | Msa0568350:CDS |
| CCGGAAATGAGAAGAGGAAT+CGG | 0.449413 | 4_1:+69970848 | None:intergenic |
| CCTGATCCTGGAACCGGAAA+GGG | 0.454744 | 4_1:-69969499 | Msa0568350:intron |
| GGACCCAACACCTGGAACTA+AGG | 0.455739 | 4_1:-69965827 | Msa0568350:intron |
| ACTGATTTACCAAAGCTAGA+AGG | 0.460360 | 4_1:+69969105 | None:intergenic |
| GCCATGAATAATCGTGGAAA+AGG | 0.463451 | 4_1:-69966096 | Msa0568350:intron |
| ACATTGTCAATGGGGCAGTC+AGG | 0.469696 | 4_1:+69968532 | None:intergenic |
| TGCAACAGCTGAGCAGGAGC+AGG | 0.470277 | 4_1:-69965093 | Msa0568350:CDS |
| ATTGCTGGTGTGGAGGATAA+AGG | 0.470324 | 4_1:-69968222 | Msa0568350:CDS |
| ATTGTCCCATTTGAGATTTG+AGG | 0.471712 | 4_1:-69964848 | Msa0568350:three_prime_UTR |
| TCATCATAGACATTGTCAAT+GGG | 0.474029 | 4_1:+69968523 | None:intergenic |
| ACATTCTCTACAGCATTAGC+AGG | 0.476336 | 4_1:+69969880 | None:intergenic |
| GTATCTACTACTGACTCAAT+AGG | 0.477186 | 4_1:-69969838 | Msa0568350:CDS |
| TCATTGAATGAGGCTGTTAA+CGG | 0.478665 | 4_1:-69968144 | Msa0568350:CDS |
| GAGAATGAGGACCCAACACC+TGG | 0.480041 | 4_1:-69965835 | Msa0568350:CDS |
| AAATTACAATCACGCGCTAC+CGG | 0.481675 | 4_1:+69970829 | None:intergenic |
| TAAAATGAGATCAAAATTCG+TGG | 0.483463 | 4_1:+69964929 | None:intergenic |
| TAGCATTCAGGGAGTCAGAA+TGG | 0.488808 | 4_1:+69969169 | None:intergenic |
| TTAATTAGATGTCACGCAAT+CGG | 0.489373 | 4_1:+69970772 | None:intergenic |
| CAGTATCGTCTTGCTGCAAA+AGG | 0.489581 | 4_1:+69968407 | None:intergenic |
| TTCTGAAGATAATAGAAGCT+TGG | 0.493783 | 4_1:-69969208 | Msa0568350:CDS |
| ATCATCATAGACATTGTCAA+TGG | 0.494759 | 4_1:+69968522 | None:intergenic |
| CGGAAATGAGAAGAGGAATC+GGG | 0.500025 | 4_1:+69970849 | None:intergenic |
| ATTCTCAACCATGATGCAAC+TGG | 0.501051 | 4_1:-69968958 | Msa0568350:CDS |
| TGTAACCTCAAATCTCAAAT+GGG | 0.501769 | 4_1:+69964843 | None:intergenic |
| AACCATGATGCAACTGGTAC+AGG | 0.505460 | 4_1:-69968952 | Msa0568350:intron |
| CTTGATCTTTAACATTGATG+TGG | 0.506223 | 4_1:+69965069 | None:intergenic |
| GGCTAATGATGATTCAGAAA+AGG | 0.506523 | 4_1:-69967959 | Msa0568350:CDS |
| TCATCTCCATCAATAACATA+AGG | 0.510363 | 4_1:+69968102 | None:intergenic |
| TCACTATCGTCAGATTGCTC+TGG | 0.510890 | 4_1:+69965023 | None:intergenic |
| CTTGTCTGCGGAAATCGAGC+TGG | 0.511468 | 4_1:-69969542 | Msa0568350:CDS |
| TTTCATGGACAAGGCACCTA+GGG | 0.515232 | 4_1:-69966414 | Msa0568350:CDS |
| AATAAGGAAGAAGATACTGC+TGG | 0.517268 | 4_1:-69965883 | Msa0568350:CDS |
| ATGCCTCAGATTTAATGATA+GGG | 0.518508 | 4_1:-69965858 | Msa0568350:CDS |
| CCCTGATCCTGGAACCGGAA+AGG | 0.518602 | 4_1:-69969500 | Msa0568350:CDS |
| TTGCACTGTTCTCGACCTGC+CGG | 0.519763 | 4_1:-69970923 | Msa0568350:five_prime_UTR |
| GACCTGCCGGAAAACGCGAC+CGG | 0.520846 | 4_1:-69970910 | Msa0568350:five_prime_UTR |
| GCAGAAGCAGAAGCAGTAGC+TGG | 0.523053 | 4_1:+69969349 | None:intergenic |
| GTGCCTTGTCCATGAAAGAC+TGG | 0.528971 | 4_1:+69966420 | None:intergenic |
| GCTGATATCCATGTCAATAA+CGG | 0.533062 | 4_1:-69970429 | Msa0568350:intron |
| ATGGCATCAGTTAACAGTAA+AGG | 0.533326 | 4_1:+69966114 | None:intergenic |
| AGCATTCAGGGAGTCAGAAT+GGG | 0.534554 | 4_1:+69969170 | None:intergenic |
| TTTAATGATAGGGGAGAATG+AGG | 0.536462 | 4_1:-69965848 | Msa0568350:CDS |
| CCTTTCCGGTTCCAGGATCA+GGG | 0.543738 | 4_1:+69969500 | None:intergenic |
| TCTGAAACTCCAAGGCATGA+AGG | 0.546371 | 4_1:-69968466 | Msa0568350:CDS |
| TAGAGATGAATTTAGAGACC+TGG | 0.547077 | 4_1:-69966498 | Msa0568350:CDS |
| CTGCAAAAGGTCAGCCAATG+TGG | 0.547743 | 4_1:+69968420 | None:intergenic |
| TGCAGAACATAAGGAGCGGT+TGG | 0.551127 | 4_1:-69967724 | Msa0568350:CDS |
| AATATCTTCTATTGCTGGTG+TGG | 0.552691 | 4_1:-69968232 | Msa0568350:CDS |
| GTGTACCTTTGATTGGTGGA+AGG | 0.552725 | 4_1:+69967577 | None:intergenic |
| CTTTCATGGACAAGGCACCT+AGG | 0.554899 | 4_1:-69966415 | Msa0568350:CDS |
| CACCTGTACCAGTTGCATCA+TGG | 0.562328 | 4_1:+69968950 | None:intergenic |
| TGGCTCGATCATCATCATCC+AGG | 0.563395 | 4_1:+69966480 | None:intergenic |
| AGAACATAAGGAGCGGTTGG+CGG | 0.564104 | 4_1:-69967721 | Msa0568350:intron |
| CTAATTAATTAATTGCGTCA+TGG | 0.565730 | 4_1:-69970757 | Msa0568350:exon |
| ATCTTCTATTGCTGGTGTGG+AGG | 0.566330 | 4_1:-69968229 | Msa0568350:CDS |
| GTTAGTGTACCTTTGATTGG+TGG | 0.573797 | 4_1:+69967573 | None:intergenic |
| CTCCCCTATCATTAAATCTG+AGG | 0.577536 | 4_1:+69965855 | None:intergenic |
| GTTTCCGGCGAGCGAAACTC+CGG | 0.579972 | 4_1:+69970891 | None:intergenic |
| TCTCCATCAATAACATAAGG+AGG | 0.580123 | 4_1:+69968105 | None:intergenic |
| TCGTGAACTGCAGACTCTGA+AGG | 0.582141 | 4_1:+69969144 | None:intergenic |
| GCGACCGGAGTTTCGCTCGC+CGG | 0.582555 | 4_1:-69970895 | Msa0568350:five_prime_UTR |
| AAAATGAGATCAAGTGCAAG+AGG | 0.583327 | 4_1:+69964797 | None:intergenic |
| CAGGATACGATGGCAAAAGT+AGG | 0.587039 | 4_1:-69968698 | Msa0568350:CDS |
| TGCCTCAGATTTAATGATAG+GGG | 0.588626 | 4_1:-69965857 | Msa0568350:CDS |
| TGAGTTTGGAGAAGTGCGAG+AGG | 0.590260 | 4_1:-69969650 | Msa0568350:intron |
| GTCATCGAGTGATTCTAGCC+CGG | 0.591218 | 4_1:+69968981 | None:intergenic |
| CTTTGGTAAATCAGTTGCAG+AGG | 0.593038 | 4_1:-69969097 | Msa0568350:intron |
| GCTGGTGTATTGCTGACTCT+AGG | 0.593908 | 4_1:+69969367 | None:intergenic |
| CAATCTGACGATAGTGACGA+TGG | 0.595092 | 4_1:-69965017 | Msa0568350:CDS |
| AATTAAGTTGAAGTACAAGA+AGG | 0.595648 | 4_1:-69966151 | Msa0568350:CDS |
| TACAAAATAATGAAGACGCA+TGG | 0.600991 | 4_1:-69964992 | Msa0568350:CDS |
| TTTCTTCGTCGAGATGCATG+GGG | 0.601698 | 4_1:+69967910 | None:intergenic |
| AAACACCTTCCACCAATCAA+AGG | 0.604763 | 4_1:-69967582 | Msa0568350:intron |
| AAGAGACATTATAAATATCG+TGG | 0.604919 | 4_1:+69964692 | None:intergenic |
| CAATAACATAAGGAGGGTCG+AGG | 0.606753 | 4_1:+69968112 | None:intergenic |
| ATAAAGGTGGTAAAACCTCA+AGG | 0.609003 | 4_1:-69968206 | Msa0568350:CDS |
| ATCTTTCAATGTGAATGGCG+CGG | 0.609959 | 4_1:-69968739 | Msa0568350:CDS |
| ACTGATGCCATGAATAATCG+TGG | 0.614136 | 4_1:-69966102 | Msa0568350:CDS |
| GGCTGATGCTAATTATGAAG+AGG | 0.617871 | 4_1:-69966546 | Msa0568350:CDS |
| AGAGACATTATAAATATCGT+GGG | 0.621493 | 4_1:+69964693 | None:intergenic |
| ATAACTCACCGTTATTGACA+TGG | 0.622723 | 4_1:+69970421 | None:intergenic |
| ATCCAACATCTGAAACTCCA+AGG | 0.623240 | 4_1:-69968474 | Msa0568350:CDS |
| CTCCATCAATAACATAAGGA+GGG | 0.625247 | 4_1:+69968106 | None:intergenic |
| TGCAAAAGGTCAGCCAATGT+GGG | 0.626313 | 4_1:+69968421 | None:intergenic |
| TTGGTGGAAGGTGTTTGCGA+AGG | 0.627136 | 4_1:+69967589 | None:intergenic |
| TTCTTGTATCTGAAACAAGT+CGG | 0.631555 | 4_1:-69970948 | Msa0568350:five_prime_UTR |
| CAATGGGGCAGTCAGGATCA+GGG | 0.632141 | 4_1:+69968539 | None:intergenic |
| CAAAGAACTGCCTACAAATG+GGG | 0.632541 | 4_1:-69969809 | Msa0568350:CDS |
| TTATGTTCAGGTCTTGTCTG+CGG | 0.632639 | 4_1:-69969554 | Msa0568350:intron |
| TTACCAGTCTTTCATGGACA+AGG | 0.633575 | 4_1:-69966423 | Msa0568350:CDS |
| TAGTTGAGATTCTTTGTGAG+TGG | 0.635988 | 4_1:+69970479 | None:intergenic |
| TTCTCCAGATAGTCCCACAT+TGG | 0.636578 | 4_1:-69968434 | Msa0568350:CDS |
| GTATTGCTGACTCTAGGTCG+TGG | 0.639699 | 4_1:+69969373 | None:intergenic |
| GAACTGCCTACAAATGGGGA+AGG | 0.640951 | 4_1:-69969805 | Msa0568350:CDS |
| GCGCTACCGGAAATGAGAAG+AGG | 0.643266 | 4_1:+69970842 | None:intergenic |
| TTCAGGGAGTCAGAATGGGA+AGG | 0.643999 | 4_1:+69969174 | None:intergenic |
| ATACGATGGCAAAAGTAGGT+CGG | 0.644577 | 4_1:-69968694 | Msa0568350:CDS |
| TTTGTCCTTCCAGGATACGA+TGG | 0.645335 | 4_1:-69968708 | Msa0568350:CDS |
| TCAGGGAGGACATCACTGAA+AGG | 0.647641 | 4_1:+69969517 | None:intergenic |
| AATATCTATATGCAGTGATG+GGG | 0.653102 | 4_1:-69966600 | Msa0568350:intron |
| TCAGAGTCTGCAGTTCACGA+TGG | 0.663364 | 4_1:-69969141 | Msa0568350:CDS |
| CATTCTCTACAGCATTAGCA+GGG | 0.663600 | 4_1:+69969881 | None:intergenic |
| AATCTGACGATAGTGACGAT+GGG | 0.666315 | 4_1:-69965016 | Msa0568350:CDS |
| CATCATAGACATTGTCAATG+GGG | 0.666547 | 4_1:+69968524 | None:intergenic |
| TACTTGCAGAACATAAGGAG+CGG | 0.669846 | 4_1:-69967728 | Msa0568350:CDS |
| CTAGAGATTAGCCTAAACGC+GGG | 0.676355 | 4_1:-69969736 | Msa0568350:CDS |
| TTTCAATGTGAATGGCGCGG+AGG | 0.676830 | 4_1:-69968736 | Msa0568350:CDS |
| ACTTGAAGAAAATGACGATG+AGG | 0.678395 | 4_1:-69968079 | Msa0568350:CDS |
| TTCTTCGTCGAGATGCATGG+GGG | 0.683443 | 4_1:+69967911 | None:intergenic |
| AAATGACGATGAGGACGACG+TGG | 0.683807 | 4_1:-69968070 | Msa0568350:CDS |
| ACTAGAGATTAGCCTAAACG+CGG | 0.695442 | 4_1:-69969737 | Msa0568350:CDS |
| GCTTCAGGCGACATTAACAA+TGG | 0.697080 | 4_1:-69969703 | Msa0568350:CDS |
| AAGTTCAAAGAAGAAATCAG+TGG | 0.701783 | 4_1:-69968016 | Msa0568350:CDS |
| TTCATGGACAAGGCACCTAG+GGG | 0.703716 | 4_1:-69966413 | Msa0568350:CDS |
| TTCCGGTTCCAGGATCAGGG+AGG | 0.714895 | 4_1:+69969503 | None:intergenic |
| GCTGGTGTGGAGGATAAAGG+TGG | 0.724198 | 4_1:-69968219 | Msa0568350:CDS |
| CAAGAAGAGCAAAGCCACAG+CGG | 0.728849 | 4_1:+69970965 | None:intergenic |
| AGAGAATGTATTGAATAATG+CGG | 0.729081 | 4_1:-69969866 | Msa0568350:CDS |
| TTACAAAGTCAAACTCACTG+AGG | 0.765503 | 4_1:-69964825 | Msa0568350:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAACTTATTTGATAAAT+AGG | + | chr4_1:69966414-69966433 | None:intergenic | 10.0% |
| !!! | ATAATTTTTTGGTATAAAAA+TGG | - | chr4_1:69967064-69967083 | Msa0568350:intron | 10.0% |
| !!! | TAATTTTTTGGTATAAAAAT+GGG | - | chr4_1:69967065-69967084 | Msa0568350:intron | 10.0% |
| !!! | ACTTTTCATTTTTTAAATAT+AGG | - | chr4_1:69969424-69969443 | Msa0568350:intron | 10.0% |
| !!! | ATTTGTGTATTTTTTTTTTA+TGG | - | chr4_1:69970197-69970216 | Msa0568350:intron | 10.0% |
| !! | TAAAAATCAATACTATTATA+AGG | - | chr4_1:69970235-69970254 | Msa0568350:intron | 10.0% |
| !!! | TATTATTTTATATCACTAAA+TGG | + | chr4_1:69970715-69970734 | None:intergenic | 10.0% |
| !!! | ATCTCATTTTAAAAAAAAAT+GGG | - | chr4_1:69970748-69970767 | Msa0568350:exon | 10.0% |
| !!! | TTAATCAATGTATTGAATTT+TGG | - | chr4_1:69965029-69965048 | Msa0568350:CDS | 15.0% |
| !!! | ATTTTTTTGGCATATATTTT+AGG | + | chr4_1:69967040-69967059 | None:intergenic | 15.0% |
| !! | AAAGTTAATATTTCGATAAA+TGG | - | chr4_1:69968535-69968554 | Msa0568350:CDS | 15.0% |
| !! | GAAAAGTTAATTTATTGAAA+AGG | + | chr4_1:69969411-69969430 | None:intergenic | 15.0% |
| !!! | TTTTTTAAATATAGGCTATT+AGG | - | chr4_1:69969432-69969451 | Msa0568350:intron | 15.0% |
| !! | TGAATAAAATATATACTCTT+TGG | - | chr4_1:69969704-69969723 | Msa0568350:CDS | 15.0% |
| !!! | AGATCTTTCTTTTTTTAAAT+TGG | - | chr4_1:69969733-69969752 | Msa0568350:CDS | 15.0% |
| !!! | CAAAGTAAAAATGTTAATTT+TGG | + | chr4_1:69970021-69970040 | None:intergenic | 15.0% |
| !!! | CAAAATTAACATTTTTACTT+TGG | - | chr4_1:69970019-69970038 | Msa0568350:intron | 15.0% |
| !!! | TATAATTATCTTTATTTGCT+AGG | + | chr4_1:69970429-69970448 | None:intergenic | 15.0% |
| !! | CAAATAAAGATAATTATAAG+TGG | - | chr4_1:69970431-69970450 | Msa0568350:CDS | 15.0% |
| !!! | GATCTCATTTTAAAAAAAAA+TGG | - | chr4_1:69970747-69970766 | Msa0568350:exon | 15.0% |
| !!! | TCTCATTTTAAAAAAAAATG+GGG | - | chr4_1:69970749-69970768 | Msa0568350:exon | 15.0% |
| !! | AGTGATTATATCAATGTATT+TGG | - | chr4_1:69965402-69965421 | Msa0568350:intron | 20.0% |
| !! | TATGTATATGTTTGATTCTT+TGG | + | chr4_1:69965679-69965698 | None:intergenic | 20.0% |
| !!! | TACAGATAATTTATCTTTTC+AGG | + | chr4_1:69966230-69966249 | None:intergenic | 20.0% |
| !! | AAAATTACAAATCATCTACA+CGG | + | chr4_1:69967357-69967376 | None:intergenic | 20.0% |
| !! | TAGTAAAAATATAGTTTGAC+AGG | + | chr4_1:69967794-69967813 | None:intergenic | 20.0% |
| !!! | AAGTATTTTCATTTTCATAG+TGG | - | chr4_1:69967851-69967870 | Msa0568350:intron | 20.0% |
| !! | AGTAAAATAATATCCCTAAT+AGG | + | chr4_1:69967921-69967940 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTGTTTTTGTTGT+TGG | - | chr4_1:69968425-69968444 | Msa0568350:CDS | 20.0% |
| !!! | ATTTTCATCGTTCAAAAAAT+TGG | - | chr4_1:69968584-69968603 | Msa0568350:intron | 20.0% |
| !! | TATGAATACCAAAAAAAGAA+GGG | + | chr4_1:69968889-69968908 | None:intergenic | 20.0% |
| !!! | ATACACAATAATTGTCTTTT+TGG | - | chr4_1:69969365-69969384 | Msa0568350:CDS | 20.0% |
| !!! | TACACAATAATTGTCTTTTT+GGG | - | chr4_1:69969366-69969385 | Msa0568350:CDS | 20.0% |
| !! | AGTTAATTTATTGAAAAGGA+CGG | + | chr4_1:69969407-69969426 | None:intergenic | 20.0% |
| !! | GGTTAATTATAAGTTTAGAA+TGG | - | chr4_1:69969636-69969655 | Msa0568350:intron | 20.0% |
| !!! | TCTTTCTTTTTTTAAATTGG+TGG | - | chr4_1:69969736-69969755 | Msa0568350:CDS | 20.0% |
| !! | ACAGAAACAAAATTCTAATA+AGG | - | chr4_1:69969766-69969785 | Msa0568350:CDS | 20.0% |
| !!! | AAAATGTTAATTTTGGTAGA+AGG | + | chr4_1:69970014-69970033 | None:intergenic | 20.0% |
| !!! | ATTTTAAAAAAAAATGGGGA+AGG | - | chr4_1:69970753-69970772 | Msa0568350:exon | 20.0% |
| !!! | CTTGATCTCATTTTTTAATT+TGG | - | chr4_1:69970877-69970896 | Msa0568350:five_prime_UTR | 20.0% |
| ! | CTAATTAATTAATTGCGTCA+TGG | - | chr4_1:69964908-69964927 | Msa0568350:three_prime_UTR | 25.0% |
| ! | CTTATTTCCATAAACTCTAT+GGG | + | chr4_1:69965325-69965344 | None:intergenic | 25.0% |
| ! | ACTTATTTCCATAAACTCTA+TGG | + | chr4_1:69965326-69965345 | None:intergenic | 25.0% |
| ! | AATCACATGATAGATATGAA+AGG | + | chr4_1:69965742-69965761 | None:intergenic | 25.0% |
| ! | AGAGAATGTATTGAATAATG+CGG | - | chr4_1:69965799-69965818 | Msa0568350:intron | 25.0% |
| !!! | TTACATTCAAGTTTTGAGTT+TGG | - | chr4_1:69966001-69966020 | Msa0568350:intron | 25.0% |
| ! | AAGTTTAATTGTATAAGCTC+AGG | - | chr4_1:69966425-69966444 | Msa0568350:CDS | 25.0% |
| ! | CTTCTATTATCTTCAGAAAA+TGG | + | chr4_1:69966455-69966474 | None:intergenic | 25.0% |
| !!! | TAGAATGCAGATATTTTTTC+CGG | - | chr4_1:69966665-69966684 | Msa0568350:intron | 25.0% |
| !! | ACATTGAAAGATTTAAGATC+TGG | + | chr4_1:69966918-69966937 | None:intergenic | 25.0% |
| ! | CTTAAATCTTTCAATGTGAA+TGG | - | chr4_1:69966921-69966940 | Msa0568350:intron | 25.0% |
| ! | CATAAAATATCTTCTATTGC+TGG | - | chr4_1:69967428-69967447 | Msa0568350:intron | 25.0% |
| !!! | TCATTCAATGAGTTTTTAGT+AGG | + | chr4_1:69967512-69967531 | None:intergenic | 25.0% |
| ! | TACTAAAAACTCATTGAATG+AGG | - | chr4_1:69967511-69967530 | Msa0568350:intron | 25.0% |
| !! | TATTTTACTTGCAGAACATA+AGG | - | chr4_1:69967932-69967951 | Msa0568350:CDS | 25.0% |
| !! | TTGTTTCTCTATGTAGAAAA+AGG | - | chr4_1:69968045-69968064 | Msa0568350:CDS | 25.0% |
| ! | GTATGAATACCAAAAAAAGA+AGG | + | chr4_1:69968890-69968909 | None:intergenic | 25.0% |
| ! | AAAATATCTATATGCAGTGA+TGG | - | chr4_1:69969063-69969082 | Msa0568350:intron | 25.0% |
| ! | AAATATCTATATGCAGTGAT+GGG | - | chr4_1:69969064-69969083 | Msa0568350:intron | 25.0% |
| !!! | AATTATGAAGAGGAGTTTTT+TGG | - | chr4_1:69969129-69969148 | Msa0568350:CDS | 25.0% |
| ! | AAAGACTGGTAATTCAATAA+AGG | + | chr4_1:69969234-69969253 | None:intergenic | 25.0% |
| !!! | AGATACTGAAAAGTTTTATG+AGG | - | chr4_1:69969290-69969309 | Msa0568350:intron | 25.0% |
| !! | ACACAATAATTGTCTTTTTG+GGG | - | chr4_1:69969367-69969386 | Msa0568350:CDS | 25.0% |
| !!! | AATTAAGTTGAAGTACAAGA+AGG | - | chr4_1:69969514-69969533 | Msa0568350:CDS | 25.0% |
| ! | ATGTTATTCACTCTACTTAA+TGG | - | chr4_1:69969615-69969634 | Msa0568350:intron | 25.0% |
| ! | GTAAGAACTTTAATAAACGA+AGG | + | chr4_1:69970051-69970070 | None:intergenic | 25.0% |
| ! | TTGCAGCAATAAAAATAACT+CGG | + | chr4_1:69970113-69970132 | None:intergenic | 25.0% |
| ! | TCACATACAATATAGTAAAG+TGG | + | chr4_1:69970379-69970398 | None:intergenic | 25.0% |
| ! | AGATAATTATAAGTGGATGT+AGG | - | chr4_1:69970438-69970457 | Msa0568350:CDS | 25.0% |
| !!! | CAAATGTATCGATTTAATCA+AGG | + | chr4_1:69970468-69970487 | None:intergenic | 25.0% |
| ! | CAATATGGGATAAGAAATAT+TGG | + | chr4_1:69970505-69970524 | None:intergenic | 25.0% |
| ! | AAAATTAGCAAGGTCAATAT+GGG | + | chr4_1:69970519-69970538 | None:intergenic | 25.0% |
| ! | TAAAATTAGCAAGGTCAATA+TGG | + | chr4_1:69970520-69970539 | None:intergenic | 25.0% |
| !!! | AAGAGTCTTTAAAATTAGCA+AGG | + | chr4_1:69970529-69970548 | None:intergenic | 25.0% |
| ! | TAAAGATCAAGAAGATTCTA+TGG | - | chr4_1:69970608-69970627 | Msa0568350:intron | 25.0% |
| ! | TAAAATGAGATCAAAATTCG+TGG | + | chr4_1:69970739-69970758 | None:intergenic | 25.0% |
| ! | AGAGACATTATAAATATCGT+GGG | + | chr4_1:69970975-69970994 | None:intergenic | 25.0% |
| ! | AAGAGACATTATAAATATCG+TGG | + | chr4_1:69970976-69970995 | None:intergenic | 25.0% |
| ! | TTCTTGTATCTGAAACAAGT+CGG | - | chr4_1:69964717-69964736 | Msa0568350:three_prime_UTR | 30.0% |
| TGAAAAAATGGATGAGTTTC+CGG | + | chr4_1:69964792-69964811 | None:intergenic | 30.0% | |
| GAATCGGGAAAATGAAAAAA+TGG | + | chr4_1:69964804-69964823 | None:intergenic | 30.0% | |
| TTAATTAGATGTCACGCAAT+CGG | + | chr4_1:69964896-69964915 | None:intergenic | 30.0% | |
| !!! | ATTATTGTTTTTACAGCGAG+AGG | - | chr4_1:69965059-69965078 | Msa0568350:CDS | 30.0% |
| ! | ATTGCAGATACATTCTTTTG+AGG | + | chr4_1:69965122-69965141 | None:intergenic | 30.0% |
| GCATTATGAGAATCATGTTT+GGG | + | chr4_1:69965218-69965237 | None:intergenic | 30.0% | |
| AGCATTATGAGAATCATGTT+TGG | + | chr4_1:69965219-69965238 | None:intergenic | 30.0% | |
| ! | GCTTCATGTAGAATCAATTT+TGG | + | chr4_1:69965497-69965516 | None:intergenic | 30.0% |
| !! | TTTTGGTGGATATTATGTTC+AGG | - | chr4_1:69966099-69966118 | Msa0568350:CDS | 30.0% |
| !!! | AATCTTGGGTTGAAACTTTT+TGG | + | chr4_1:69966269-69966288 | None:intergenic | 30.0% |
| AACTTATCATTTGTGCAAGT+GGG | + | chr4_1:69966358-69966377 | None:intergenic | 30.0% | |
| AAACTTATCATTTGTGCAAG+TGG | + | chr4_1:69966359-69966378 | None:intergenic | 30.0% | |
| ! | TTCTGAAGATAATAGAAGCT+TGG | - | chr4_1:69966457-69966476 | Msa0568350:CDS | 30.0% |
| !!! | AGAATGCAGATATTTTTTCC+GGG | - | chr4_1:69966666-69966685 | Msa0568350:intron | 30.0% |
| GTGAAGATTATGTGATTCAT+AGG | - | chr4_1:69967002-69967021 | Msa0568350:intron | 30.0% | |
| ! | TTTTGGTATAAAAATGGGAG+CGG | - | chr4_1:69967070-69967089 | Msa0568350:intron | 30.0% |
| GGTTATTATTTGTTTCAGGA+AGG | - | chr4_1:69967091-69967110 | Msa0568350:intron | 30.0% | |
| TCATCATAGACATTGTCAAT+GGG | + | chr4_1:69967145-69967164 | None:intergenic | 30.0% | |
| ATCATCATAGACATTGTCAA+TGG | + | chr4_1:69967146-69967165 | None:intergenic | 30.0% | |
| GATTATCAATCCATGAAATC+TGG | - | chr4_1:69967163-69967182 | Msa0568350:intron | 30.0% | |
| TCATCTCCATCAATAACATA+AGG | + | chr4_1:69967566-69967585 | None:intergenic | 30.0% | |
| AAGTTCAAAGAAGAAATCAG+TGG | - | chr4_1:69967649-69967668 | Msa0568350:intron | 30.0% | |
| AAGAAATCAGTGGCTAAAAA+GGG | - | chr4_1:69967659-69967678 | Msa0568350:intron | 30.0% | |
| AACATCTAAAAAACGCAAGA+AGG | - | chr4_1:69967685-69967704 | Msa0568350:intron | 30.0% | |
| !!! | TTTCATTTTCATAGTGGACA+AGG | - | chr4_1:69967857-69967876 | Msa0568350:intron | 30.0% |
| ATCAACGAACAATACCTATT+AGG | - | chr4_1:69967904-69967923 | Msa0568350:CDS | 30.0% | |
| TCAACGAACAATACCTATTA+GGG | - | chr4_1:69967905-69967924 | Msa0568350:CDS | 30.0% | |
| TTTCTCTATGTAGAAAAAGG+AGG | - | chr4_1:69968048-69968067 | Msa0568350:CDS | 30.0% | |
| TTGATAGAGTTAGTTAGAGT+TGG | - | chr4_1:69968190-69968209 | Msa0568350:CDS | 30.0% | |
| ! | AGAACTCTACATGTATTTTC+TGG | - | chr4_1:69968247-69968266 | Msa0568350:CDS | 30.0% |
| AGTATACAAGATGTTTACAG+TGG | + | chr4_1:69968304-69968323 | None:intergenic | 30.0% | |
| ! | ATCGTTCAAAAAATTGGTTC+AGG | - | chr4_1:69968590-69968609 | Msa0568350:intron | 30.0% |
| ! | TTCAAAAAATTGGTTCAGGT+GGG | - | chr4_1:69968594-69968613 | Msa0568350:intron | 30.0% |
| AAATCTAGCAGAATCAGTTA+TGG | + | chr4_1:69968734-69968753 | None:intergenic | 30.0% | |
| AGTCAGTGAGTAAAATGTTA+GGG | - | chr4_1:69968848-69968867 | Msa0568350:intron | 30.0% | |
| TGTTAGGGGATATAAATCAA+AGG | - | chr4_1:69968863-69968882 | Msa0568350:intron | 30.0% | |
| TTGGTATTCATACATGCATT+CGG | - | chr4_1:69968897-69968916 | Msa0568350:intron | 30.0% | |
| ! | CTCAGTAGTATTGAACAAAA+AGG | - | chr4_1:69968936-69968955 | Msa0568350:intron | 30.0% |
| AATATCTATATGCAGTGATG+GGG | - | chr4_1:69969065-69969084 | Msa0568350:intron | 30.0% | |
| !! | AGTTGATGTAATCTTTTCAG+TGG | + | chr4_1:69969208-69969227 | None:intergenic | 30.0% |
| ATTGAATTACCAGTCTTTCA+TGG | - | chr4_1:69969236-69969255 | Msa0568350:intron | 30.0% | |
| ! | TGCATAATTTTTACCATGTC+AGG | - | chr4_1:69969317-69969336 | Msa0568350:intron | 30.0% |
| ! | CACAATAATTGTCTTTTTGG+GGG | - | chr4_1:69969368-69969387 | Msa0568350:CDS | 30.0% |
| !!! | TTTGATGACGTGTTTTATCA+GGG | + | chr4_1:69969496-69969515 | None:intergenic | 30.0% |
| !!! | ATTTGATGACGTGTTTTATC+AGG | + | chr4_1:69969497-69969516 | None:intergenic | 30.0% |
| TCTTTATATACTCCTTGATG+AGG | - | chr4_1:69969667-69969686 | Msa0568350:CDS | 30.0% | |
| CTTTATATACTCCTTGATGA+GGG | - | chr4_1:69969668-69969687 | Msa0568350:CDS | 30.0% | |
| ATGCCTCAGATTTAATGATA+GGG | - | chr4_1:69969807-69969826 | Msa0568350:CDS | 30.0% | |
| !!! | GAGTTATTTTTATTGCTGCA+AGG | - | chr4_1:69970112-69970131 | Msa0568350:intron | 30.0% |
| AACAACATAGCTATTAATCG+AGG | + | chr4_1:69970153-69970172 | None:intergenic | 30.0% | |
| !!! | TAGTATTGATTTTTATCCGC+TGG | + | chr4_1:69970230-69970249 | None:intergenic | 30.0% |
| CAAGCGATAATTAGAATAAC+TGG | + | chr4_1:69970279-69970298 | None:intergenic | 30.0% | |
| GATATGACATTAAACCTTTC+CGG | - | chr4_1:69970397-69970416 | Msa0568350:intron | 30.0% | |
| ! | TTTATTTGCTAGGTTATGTC+CGG | + | chr4_1:69970419-69970438 | None:intergenic | 30.0% |
| CTTGATCTTTAACATTGATG+TGG | + | chr4_1:69970599-69970618 | None:intergenic | 30.0% | |
| TACAAAATAATGAAGACGCA+TGG | - | chr4_1:69970673-69970692 | Msa0568350:intron | 30.0% | |
| CAAATGGGACAATAGTAAAA+TGG | + | chr4_1:69970810-69970829 | None:intergenic | 30.0% | |
| TGTAACCTCAAATCTCAAAT+GGG | + | chr4_1:69970825-69970844 | None:intergenic | 30.0% | |
| TTGTAACCTCAAATCTCAAA+TGG | + | chr4_1:69970826-69970845 | None:intergenic | 30.0% | |
| !!! | CGTGATATTTTAGTTTTTCG+CGG | - | chr4_1:69970907-69970926 | Msa0568350:five_prime_UTR | 30.0% |
| !!! | TTTTTTTGTTTGGAGCTGCT+GGG | + | chr4_1:69964675-69964694 | None:intergenic | 35.0% |
| !!! | ATTTTTTTGTTTGGAGCTGC+TGG | + | chr4_1:69964676-69964695 | None:intergenic | 35.0% |
| !!! | AGCGGTTGCATTTTTTTGTT+TGG | + | chr4_1:69964685-69964704 | None:intergenic | 35.0% |
| GTAGTAGTAGTAGTAGTAGT+AGG | + | chr4_1:69964957-69964976 | None:intergenic | 35.0% | |
| TAGTTGAGATTCTTTGTGAG+TGG | + | chr4_1:69965189-69965208 | None:intergenic | 35.0% | |
| GCTGATATCCATGTCAATAA+CGG | - | chr4_1:69965236-69965255 | Msa0568350:intron | 35.0% | |
| ATAACTCACCGTTATTGACA+TGG | + | chr4_1:69965247-69965266 | None:intergenic | 35.0% | |
| TTGCTATCCCATAGAGTTTA+TGG | - | chr4_1:69965315-69965334 | Msa0568350:intron | 35.0% | |
| ! | AAGGTGAAGTGATTTGTGTT+TGG | + | chr4_1:69965594-69965613 | None:intergenic | 35.0% |
| ! | TCTGATTAACAGTGAGTTGA+AGG | + | chr4_1:69965613-69965632 | None:intergenic | 35.0% |
| !! | GTATCTACTACTGACTCAAT+AGG | - | chr4_1:69965827-69965846 | Msa0568350:intron | 35.0% |
| AACAAAGAACTGCCTACAAA+TGG | - | chr4_1:69965854-69965873 | Msa0568350:CDS | 35.0% | |
| ACAAAGAACTGCCTACAAAT+GGG | - | chr4_1:69965855-69965874 | Msa0568350:CDS | 35.0% | |
| TACCATGTATTTCACTGCTT+CGG | - | chr4_1:69966061-69966080 | Msa0568350:intron | 35.0% | |
| ! | GGATGTGTTTAGTCAACTTT+TGG | - | chr4_1:69966082-69966101 | Msa0568350:intron | 35.0% |
| ! | TGTGTTTAGTCAACTTTTGG+TGG | - | chr4_1:69966085-69966104 | Msa0568350:intron | 35.0% |
| ! | AGTTTACCTTTTCACACTTC+AGG | - | chr4_1:69966374-69966393 | Msa0568350:intron | 35.0% |
| !!! | AGAGATTTTCCTTCTAGCTT+TGG | - | chr4_1:69966551-69966570 | Msa0568350:CDS | 35.0% |
| ! | ACTGATTTACCAAAGCTAGA+AGG | + | chr4_1:69966563-69966582 | None:intergenic | 35.0% |
| TATCTGCATTCTATACGTGT+AGG | + | chr4_1:69966658-69966677 | None:intergenic | 35.0% | |
| CATGAGAGTGAGAGAATAAA+TGG | + | chr4_1:69966816-69966835 | None:intergenic | 35.0% | |
| CTCTCACTCTCATGTTTAAT+TGG | - | chr4_1:69966822-69966841 | Msa0568350:intron | 35.0% | |
| ! | GCAAACAATTTTCCAATCAC+TGG | + | chr4_1:69966888-69966907 | None:intergenic | 35.0% |
| GAGCGGTTATTATTTGTTTC+AGG | - | chr4_1:69967087-69967106 | Msa0568350:intron | 35.0% | |
| CATCATAGACATTGTCAATG+GGG | + | chr4_1:69967144-69967163 | None:intergenic | 35.0% | |
| ! | TTTTATTCGCAAGCTTTCTC+AGG | - | chr4_1:69967373-69967392 | Msa0568350:intron | 35.0% |
| AATATCTTCTATTGCTGGTG+TGG | - | chr4_1:69967433-69967452 | Msa0568350:intron | 35.0% | |
| ATAAAGGTGGTAAAACCTCA+AGG | - | chr4_1:69967459-69967478 | Msa0568350:intron | 35.0% | |
| ! | TTGTTTTCTTGGTTTCCTTG+AGG | + | chr4_1:69967477-69967496 | None:intergenic | 35.0% |
| !! | TTACTAGCTGCTTGTTTTCT+TGG | + | chr4_1:69967488-69967507 | None:intergenic | 35.0% |
| TCATTGAATGAGGCTGTTAA+CGG | - | chr4_1:69967521-69967540 | Msa0568350:intron | 35.0% | |
| CTCCATCAATAACATAAGGA+GGG | + | chr4_1:69967562-69967581 | None:intergenic | 35.0% | |
| TCTCCATCAATAACATAAGG+AGG | + | chr4_1:69967563-69967582 | None:intergenic | 35.0% | |
| ACTTGAAGAAAATGACGATG+AGG | - | chr4_1:69967586-69967605 | Msa0568350:CDS | 35.0% | |
| GAAGAAATCAGTGGCTAAAA+AGG | - | chr4_1:69967658-69967677 | Msa0568350:intron | 35.0% | |
| GGCTAATGATGATTCAGAAA+AGG | - | chr4_1:69967706-69967725 | Msa0568350:intron | 35.0% | |
| AATGCTAGCAATTGACATTG+TGG | - | chr4_1:69967998-69968017 | Msa0568350:CDS | 35.0% | |
| ATGCTAGCAATTGACATTGT+GGG | - | chr4_1:69967999-69968018 | Msa0568350:CDS | 35.0% | |
| AGAGAAACAAACGAAACAGT+TGG | + | chr4_1:69968035-69968054 | None:intergenic | 35.0% | |
| AGTGTTAGTGTACCTTTGAT+TGG | + | chr4_1:69968098-69968117 | None:intergenic | 35.0% | |
| TACACAGCTTATGAGTGTAT+CGG | - | chr4_1:69968117-69968136 | Msa0568350:CDS | 35.0% | |
| GTTAGTAGCTTGAGAAGTTA+AGG | - | chr4_1:69968155-69968174 | Msa0568350:CDS | 35.0% | |
| !!! | CACTCATGCTTTTGAAGTAA+AGG | - | chr4_1:69968351-69968370 | Msa0568350:intron | 35.0% |
| TGTATGCCATATGATGGTTT+CGG | + | chr4_1:69968477-69968496 | None:intergenic | 35.0% | |
| ! | GTTCAAAAAATTGGTTCAGG+TGG | - | chr4_1:69968593-69968612 | Msa0568350:intron | 35.0% |
| CTTCTGTTCAGTCCAAATTT+AGG | - | chr4_1:69968685-69968704 | Msa0568350:intron | 35.0% | |
| GATGTACTAGCTCCTAAATT+TGG | + | chr4_1:69968700-69968719 | None:intergenic | 35.0% | |
| GAGTCAGTGAGTAAAATGTT+AGG | - | chr4_1:69968847-69968866 | Msa0568350:intron | 35.0% | |
| GTCAGTGAGTAAAATGTTAG+GGG | - | chr4_1:69968849-69968868 | Msa0568350:intron | 35.0% | |
| !!! | ATCAAAGGCCCTTCTTTTTT+TGG | - | chr4_1:69968878-69968897 | Msa0568350:intron | 35.0% |
| TGTTCAATACTACTGAGAAG+AGG | + | chr4_1:69968933-69968952 | None:intergenic | 35.0% | |
| TTCAACAGTGACAGTAACAA+TGG | + | chr4_1:69969009-69969028 | None:intergenic | 35.0% | |
| ! | TGATGTGGATTTTCATCATG+AGG | - | chr4_1:69969098-69969117 | Msa0568350:CDS | 35.0% |
| TAGAGATGAATTTAGAGACC+TGG | - | chr4_1:69969167-69969186 | Msa0568350:CDS | 35.0% | |
| GAAAATATTAACGCCTGACA+TGG | + | chr4_1:69969333-69969352 | None:intergenic | 35.0% | |
| !! | ATAATTGTCTTTTTGGGGGA+TGG | - | chr4_1:69969372-69969391 | Msa0568350:CDS | 35.0% |
| !! | TAATTGTCTTTTTGGGGGAT+GGG | - | chr4_1:69969373-69969392 | Msa0568350:CDS | 35.0% |
| ATATAGGCTATTAGGCAGTT+TGG | - | chr4_1:69969440-69969459 | Msa0568350:intron | 35.0% | |
| ATGGCATCAGTTAACAGTAA+AGG | + | chr4_1:69969554-69969573 | None:intergenic | 35.0% | |
| ! | ACCTTTTCCACGATTATTCA+TGG | + | chr4_1:69969573-69969592 | None:intergenic | 35.0% |
| !!! | AGAGTTTTATTCCCTCATCA+AGG | + | chr4_1:69969682-69969701 | None:intergenic | 35.0% |
| AATAAGGAAGAAGATACTGC+TGG | - | chr4_1:69969782-69969801 | Msa0568350:CDS | 35.0% | |
| GATGCCTCAGATTTAATGAT+AGG | - | chr4_1:69969806-69969825 | Msa0568350:CDS | 35.0% | |
| TGCCTCAGATTTAATGATAG+GGG | - | chr4_1:69969808-69969827 | Msa0568350:CDS | 35.0% | |
| TTTAATGATAGGGGAGAATG+AGG | - | chr4_1:69969817-69969836 | Msa0568350:CDS | 35.0% | |
| ! | CACAGTTTTGCTTTCTCTTT+TGG | - | chr4_1:69969867-69969886 | Msa0568350:CDS | 35.0% |
| !!! | TTTTAGCTTTGAAGTTCAGC+TGG | - | chr4_1:69970087-69970106 | Msa0568350:intron | 35.0% |
| ! | TTTTTATGGAAATCCTCCAG+CGG | - | chr4_1:69970211-69970230 | Msa0568350:intron | 35.0% |
| !!! | TATTGATTTTTATCCGCTGG+AGG | + | chr4_1:69970227-69970246 | None:intergenic | 35.0% |
| ! | ATTGTCCCATTTGAGATTTG+AGG | - | chr4_1:69970817-69970836 | Msa0568350:five_prime_UTR | 35.0% |
| TTACAAAGTCAAACTCACTG+AGG | - | chr4_1:69970840-69970859 | Msa0568350:five_prime_UTR | 35.0% | |
| AAAATGAGATCAAGTGCAAG+AGG | + | chr4_1:69970871-69970890 | None:intergenic | 35.0% | |
| ACAAAAAAATGCAACCGCTG+TGG | - | chr4_1:69964686-69964705 | Msa0568350:three_prime_UTR | 40.0% | |
| AAATTACAATCACGCGCTAC+CGG | + | chr4_1:69964839-69964858 | None:intergenic | 40.0% | |
| ACTACTACTACTACTACACG+TGG | - | chr4_1:69964960-69964979 | Msa0568350:exon | 40.0% | |
| !! | GCAGATACATTCTTTTGAGG+CGG | + | chr4_1:69965119-69965138 | None:intergenic | 40.0% |
| ! | GTATTTGGTTCCACTTCTGA+AGG | - | chr4_1:69965417-69965436 | Msa0568350:intron | 40.0% |
| CAATTCTACACCTTCAGAAG+TGG | + | chr4_1:69965430-69965449 | None:intergenic | 40.0% | |
| CATTCTCTACAGCATTAGCA+GGG | + | chr4_1:69965787-69965806 | None:intergenic | 40.0% | |
| ACATTCTCTACAGCATTAGC+AGG | + | chr4_1:69965788-69965807 | None:intergenic | 40.0% | |
| CAAAGAACTGCCTACAAATG+GGG | - | chr4_1:69965856-69965875 | Msa0568350:CDS | 40.0% | |
| TCTTGACAGCAACAAGAGTT+TGG | - | chr4_1:69965889-69965908 | Msa0568350:CDS | 40.0% | |
| !! | ACTAGAGATTAGCCTAAACG+CGG | - | chr4_1:69965928-69965947 | Msa0568350:CDS | 40.0% |
| ATCCGAAGCAGTGAAATACA+TGG | + | chr4_1:69966066-69966085 | None:intergenic | 40.0% | |
| ! | TTATGTTCAGGTCTTGTCTG+CGG | - | chr4_1:69966111-69966130 | Msa0568350:CDS | 40.0% |
| CCAATATTCCTAACCCTTTC+CGG | + | chr4_1:69966182-69966201 | None:intergenic | 40.0% | |
| AGAATGCCTGAAGTGTGAAA+AGG | + | chr4_1:69966383-69966402 | None:intergenic | 40.0% | |
| TTCACACTTCAGGCATTCTT+AGG | - | chr4_1:69966384-69966403 | Msa0568350:CDS | 40.0% | |
| CTTTGGTAAATCAGTTGCAG+AGG | - | chr4_1:69966568-69966587 | Msa0568350:CDS | 40.0% | |
| ATTCTCAACCATGATGCAAC+TGG | - | chr4_1:69966707-69966726 | Msa0568350:intron | 40.0% | |
| ! | CTTTTCAAACGCACGAGTTT+CGG | - | chr4_1:69966777-69966796 | Msa0568350:intron | 40.0% |
| CTCAGCCAATTGTAATTACC+TGG | - | chr4_1:69966847-69966866 | Msa0568350:intron | 40.0% | |
| AATTGTAATTACCTGGCCCT+GGG | - | chr4_1:69966854-69966873 | Msa0568350:intron | 40.0% | |
| ATCACTGGTAAAGAATCCCA+GGG | + | chr4_1:69966873-69966892 | None:intergenic | 40.0% | |
| AATCACTGGTAAAGAATCCC+AGG | + | chr4_1:69966874-69966893 | None:intergenic | 40.0% | |
| TGGGATTCTTTACCAGTGAT+TGG | - | chr4_1:69966873-69966892 | Msa0568350:intron | 40.0% | |
| ATCTTTCAATGTGAATGGCG+CGG | - | chr4_1:69966926-69966945 | Msa0568350:intron | 40.0% | |
| GAGGAAAAATTTGTCCTTCC+AGG | - | chr4_1:69966948-69966967 | Msa0568350:intron | 40.0% | |
| ATACGATGGCAAAAGTAGGT+CGG | - | chr4_1:69966971-69966990 | Msa0568350:intron | 40.0% | |
| CAAAAGTAGGTCGGAAATAC+AGG | - | chr4_1:69966980-69966999 | Msa0568350:intron | 40.0% | |
| TGGATCAATGCCAGATTTCA+TGG | + | chr4_1:69967176-69967195 | None:intergenic | 40.0% | |
| ! | ATCCAACATCTGAAACTCCA+AGG | - | chr4_1:69967191-69967210 | Msa0568350:intron | 40.0% |
| CAGAATCACAATCAGAGAAG+TGG | + | chr4_1:69967333-69967352 | None:intergenic | 40.0% | |
| GACCCTCCTTATGTTATTGA+TGG | - | chr4_1:69967557-69967576 | Msa0568350:intron | 40.0% | |
| ! | TTTTCTTCGTCGAGATGCAT+GGG | + | chr4_1:69967759-69967778 | None:intergenic | 40.0% |
| ! | TTTTTCTTCGTCGAGATGCA+TGG | + | chr4_1:69967760-69967779 | None:intergenic | 40.0% |
| TCTCGACGAAGAAAAAGATG+TGG | - | chr4_1:69967764-69967783 | Msa0568350:CDS | 40.0% | |
| TACTTGCAGAACATAAGGAG+CGG | - | chr4_1:69967937-69967956 | Msa0568350:CDS | 40.0% | |
| AAACACCTTCCACCAATCAA+AGG | - | chr4_1:69968083-69968102 | Msa0568350:CDS | 40.0% | |
| GTTAGTGTACCTTTGATTGG+TGG | + | chr4_1:69968095-69968114 | None:intergenic | 40.0% | |
| GTCTAACTGAAAGCAAGCAT+AGG | + | chr4_1:69968221-69968240 | None:intergenic | 40.0% | |
| ATGCAGTGTATGCCATATGA+TGG | + | chr4_1:69968483-69968502 | None:intergenic | 40.0% | |
| TCTAGCAGAATCAGTTATGG+CGG | + | chr4_1:69968731-69968750 | None:intergenic | 40.0% | |
| CATAAACTGCTGCAGAGAAA+AGG | + | chr4_1:69968823-69968842 | None:intergenic | 40.0% | |
| ! | TGGGGATTTTCATCATGATG+TGG | - | chr4_1:69969083-69969102 | Msa0568350:intron | 40.0% |
| GGCTGATGCTAATTATGAAG+AGG | - | chr4_1:69969119-69969138 | Msa0568350:CDS | 40.0% | |
| TTACCAGTCTTTCATGGACA+AGG | - | chr4_1:69969242-69969261 | Msa0568350:intron | 40.0% | |
| ACTGATGCCATGAATAATCG+TGG | - | chr4_1:69969563-69969582 | Msa0568350:intron | 40.0% | |
| GCCATGAATAATCGTGGAAA+AGG | - | chr4_1:69969569-69969588 | Msa0568350:intron | 40.0% | |
| CTCCCCTATCATTAAATCTG+AGG | + | chr4_1:69969813-69969832 | None:intergenic | 40.0% | |
| AAACCTTAGTTCCAGGTGTT+GGG | + | chr4_1:69969844-69969863 | None:intergenic | 40.0% | |
| CACTATTCTCTTGATGCACA+TGG | - | chr4_1:69969893-69969912 | Msa0568350:CDS | 40.0% | |
| CTCTTGATGCACATGGTTTA+TGG | - | chr4_1:69969900-69969919 | Msa0568350:CDS | 40.0% | |
| ! | TATTGCATGATGTTTTCCCG+TGG | - | chr4_1:69969968-69969987 | Msa0568350:intron | 40.0% |
| AGTTAAGTTCCACACTTCCA+CGG | + | chr4_1:69969988-69970007 | None:intergenic | 40.0% | |
| TCTATGTAGCAGAGGGATAA+AGG | - | chr4_1:69970344-69970363 | Msa0568350:intron | 40.0% | |
| CTATGTAGCAGAGGGATAAA+GGG | - | chr4_1:69970345-69970364 | Msa0568350:intron | 40.0% | |
| TATGTAGCAGAGGGATAAAG+GGG | - | chr4_1:69970346-69970365 | Msa0568350:intron | 40.0% | |
| AATCTGACGATAGTGACGAT+GGG | - | chr4_1:69970649-69970668 | Msa0568350:intron | 40.0% | |
| CGGAAATGAGAAGAGGAATC+GGG | + | chr4_1:69964819-69964838 | None:intergenic | 45.0% | |
| CCGGAAATGAGAAGAGGAAT+CGG | + | chr4_1:69964820-69964839 | None:intergenic | 45.0% | |
| CCGATTCCTCTTCTCATTTC+CGG | - | chr4_1:69964817-69964836 | Msa0568350:three_prime_UTR | 45.0% | |
| CTACACGTGGTAACTGCTAA+TGG | - | chr4_1:69964973-69964992 | Msa0568350:CDS | 45.0% | |
| !!! | TTGTTTTTACAGCGAGAGGC+AGG | - | chr4_1:69965063-69965082 | Msa0568350:CDS | 45.0% |
| !!! | GATACATTCTTTTGAGGCGG+TGG | + | chr4_1:69965116-69965135 | None:intergenic | 45.0% |
| CATGAACCTTCCCCATTTGT+AGG | + | chr4_1:69965869-69965888 | None:intergenic | 45.0% | |
| !! | CTAGAGATTAGCCTAAACGC+GGG | - | chr4_1:69965929-69965948 | Msa0568350:CDS | 45.0% |
| GCTTCAGGCGACATTAACAA+TGG | - | chr4_1:69965962-69965981 | Msa0568350:intron | 45.0% | |
| CCGGAAAGGGTTAGGAATAT+TGG | - | chr4_1:69966179-69966198 | Msa0568350:CDS | 45.0% | |
| CTAGGTCGTGGCTTAATCTT+GGG | + | chr4_1:69966283-69966302 | None:intergenic | 45.0% | |
| TCTAGGTCGTGGCTTAATCT+TGG | + | chr4_1:69966284-69966303 | None:intergenic | 45.0% | |
| AGCATTCAGGGAGTCAGAAT+GGG | + | chr4_1:69966498-69966517 | None:intergenic | 45.0% | |
| TAGCATTCAGGGAGTCAGAA+TGG | + | chr4_1:69966499-69966518 | None:intergenic | 45.0% | |
| ! | CTCTGAAGGCATAGCATTCA+GGG | + | chr4_1:69966510-69966529 | None:intergenic | 45.0% |
| ! | ACTCTGAAGGCATAGCATTC+AGG | + | chr4_1:69966511-69966530 | None:intergenic | 45.0% |
| AACCATGATGCAACTGGTAC+AGG | - | chr4_1:69966713-69966732 | Msa0568350:intron | 45.0% | |
| CAGGGCCAGGTAATTACAAT+TGG | + | chr4_1:69966855-69966874 | None:intergenic | 45.0% | |
| CAATTGTAATTACCTGGCCC+TGG | - | chr4_1:69966853-69966872 | Msa0568350:intron | 45.0% | |
| TTTGTCCTTCCAGGATACGA+TGG | - | chr4_1:69966957-69966976 | Msa0568350:intron | 45.0% | |
| ! | TTTTGCCATCGTATCCTGGA+AGG | + | chr4_1:69966965-69966984 | None:intergenic | 45.0% |
| !! | CTACTTTTGCCATCGTATCC+TGG | + | chr4_1:69966969-69966988 | None:intergenic | 45.0% |
| CAGGATACGATGGCAAAAGT+AGG | - | chr4_1:69966967-69966986 | Msa0568350:intron | 45.0% | |
| TGCCTTGGAGTTTCAGATGT+TGG | + | chr4_1:69967196-69967215 | None:intergenic | 45.0% | |
| ! | TCTGAAACTCCAAGGCATGA+AGG | - | chr4_1:69967199-69967218 | Msa0568350:intron | 45.0% |
| TTTGTCAAGCCTTCATGCCT+TGG | + | chr4_1:69967211-69967230 | None:intergenic | 45.0% | |
| TTCTCCAGATAGTCCCACAT+TGG | - | chr4_1:69967231-69967250 | Msa0568350:intron | 45.0% | |
| TGCAAAAGGTCAGCCAATGT+GGG | + | chr4_1:69967247-69967266 | None:intergenic | 45.0% | |
| CAGTATCGTCTTGCTGCAAA+AGG | + | chr4_1:69967261-69967280 | None:intergenic | 45.0% | |
| ! | CTTTTGCAGCAAGACGATAC+TGG | - | chr4_1:69967259-69967278 | Msa0568350:intron | 45.0% |
| ATCTTCTATTGCTGGTGTGG+AGG | - | chr4_1:69967436-69967455 | Msa0568350:intron | 45.0% | |
| ATTGCTGGTGTGGAGGATAA+AGG | - | chr4_1:69967443-69967462 | Msa0568350:intron | 45.0% | |
| CAATAACATAAGGAGGGTCG+AGG | + | chr4_1:69967556-69967575 | None:intergenic | 45.0% | |
| TGTTGATGCGCTTGTCTTCT+TGG | + | chr4_1:69967630-69967649 | None:intergenic | 45.0% | |
| ! | GATGCATGGGGGAACTTTTT+AGG | + | chr4_1:69967746-69967765 | None:intergenic | 45.0% |
| TTTCTTCGTCGAGATGCATG+GGG | + | chr4_1:69967758-69967777 | None:intergenic | 45.0% | |
| GTGTACCTTTGATTGGTGGA+AGG | + | chr4_1:69968091-69968110 | None:intergenic | 45.0% | |
| ! | CATATGATGGTTTCGGTGCA+GGG | + | chr4_1:69968470-69968489 | None:intergenic | 45.0% |
| CTGCTGCAGAGAAAAGGAAT+TGG | + | chr4_1:69968817-69968836 | None:intergenic | 45.0% | |
| CTACTGAGAAGAGGATGTTG+TGG | + | chr4_1:69968924-69968943 | None:intergenic | 45.0% | |
| GTGACAGTAACAATGGCAAG+TGG | + | chr4_1:69969002-69969021 | None:intergenic | 45.0% | |
| ! | TTTCATGGACAAGGCACCTA+GGG | - | chr4_1:69969251-69969270 | Msa0568350:intron | 45.0% |
| CAAACCTTAGTTCCAGGTGT+TGG | + | chr4_1:69969845-69969864 | None:intergenic | 45.0% | |
| GTTAAGTTCCACACTTCCAC+GGG | + | chr4_1:69969987-69970006 | None:intergenic | 45.0% | |
| ! | GTGGAAGTGTGGAACTTAAC+TGG | - | chr4_1:69969987-69970006 | Msa0568350:intron | 45.0% |
| TACATAGAGTACGAGAGAGG+GGG | + | chr4_1:69970332-69970351 | None:intergenic | 45.0% | |
| CTACATAGAGTACGAGAGAG+GGG | + | chr4_1:69970333-69970352 | None:intergenic | 45.0% | |
| GCTACATAGAGTACGAGAGA+GGG | + | chr4_1:69970334-69970353 | None:intergenic | 45.0% | |
| TGCTACATAGAGTACGAGAG+AGG | + | chr4_1:69970335-69970354 | None:intergenic | 45.0% | |
| TCTCGTACTCTATGTAGCAG+AGG | - | chr4_1:69970336-69970355 | Msa0568350:intron | 45.0% | |
| CTCGTACTCTATGTAGCAGA+GGG | - | chr4_1:69970337-69970356 | Msa0568350:intron | 45.0% | |
| TTGCTAGGTTATGTCCGGAA+AGG | + | chr4_1:69970414-69970433 | None:intergenic | 45.0% | |
| ! | GACTCTTGTTATCTGAGTGC+AGG | - | chr4_1:69970542-69970561 | Msa0568350:CDS | 45.0% |
| TGTTATCTGAGTGCAGGAAG+AGG | - | chr4_1:69970548-69970567 | Msa0568350:CDS | 45.0% | |
| TCACTATCGTCAGATTGCTC+TGG | + | chr4_1:69970645-69970664 | None:intergenic | 45.0% | |
| CAATCTGACGATAGTGACGA+TGG | - | chr4_1:69970648-69970667 | Msa0568350:intron | 45.0% | |
| !!! | AAAAATTATCATTATTTTTT+TGG | + | chr4_1:69967053-69967072 | None:intergenic | 5.0% |
| !!! | AAAAAATAATGATAATTTTT+TGG | - | chr4_1:69967053-69967072 | Msa0568350:intron | 5.0% |
| !! | ATTTATTTATTTGATAAATA+TGG | + | chr4_1:69969943-69969962 | None:intergenic | 5.0% |
| CAAGAAGAGCAAAGCCACAG+CGG | + | chr4_1:69964703-69964722 | None:intergenic | 50.0% | |
| !!! | ACATTCTTTTGAGGCGGTGG+TGG | + | chr4_1:69965113-69965132 | None:intergenic | 50.0% |
| GAACTGCCTACAAATGGGGA+AGG | - | chr4_1:69965860-69965879 | Msa0568350:CDS | 50.0% | |
| ! | TGAGTTTGGAGAAGTGCGAG+AGG | - | chr4_1:69966015-69966034 | Msa0568350:intron | 50.0% |
| TCAGGGAGGACATCACTGAA+AGG | + | chr4_1:69966151-69966170 | None:intergenic | 50.0% | |
| !! | GTATTGCTGACTCTAGGTCG+TGG | + | chr4_1:69966295-69966314 | None:intergenic | 50.0% |
| !! | GCTGGTGTATTGCTGACTCT+AGG | + | chr4_1:69966301-69966320 | None:intergenic | 50.0% |
| GCTTCTGCTTCTGCTTCATC+TGG | - | chr4_1:69966325-69966344 | Msa0568350:intron | 50.0% | |
| TTCAGGGAGTCAGAATGGGA+AGG | + | chr4_1:69966494-69966513 | None:intergenic | 50.0% | |
| TCGTGAACTGCAGACTCTGA+AGG | + | chr4_1:69966524-69966543 | None:intergenic | 50.0% | |
| TCAGAGTCTGCAGTTCACGA+TGG | - | chr4_1:69966524-69966543 | Msa0568350:CDS | 50.0% | |
| GTCATCGAGTGATTCTAGCC+CGG | + | chr4_1:69966687-69966706 | None:intergenic | 50.0% | |
| CACCTGTACCAGTTGCATCA+TGG | + | chr4_1:69966718-69966737 | None:intergenic | 50.0% | |
| TTTCAATGTGAATGGCGCGG+AGG | - | chr4_1:69966929-69966948 | Msa0568350:intron | 50.0% | |
| ACATTGTCAATGGGGCAGTC+AGG | + | chr4_1:69967136-69967155 | None:intergenic | 50.0% | |
| TCAGCCAATGTGGGACTATC+TGG | + | chr4_1:69967238-69967257 | None:intergenic | 50.0% | |
| CTGCAAAAGGTCAGCCAATG+TGG | + | chr4_1:69967248-69967267 | None:intergenic | 50.0% | |
| AAATGACGATGAGGACGACG+TGG | - | chr4_1:69967595-69967614 | Msa0568350:CDS | 50.0% | |
| !! | GCATGGGGGAACTTTTTAGG+AGG | + | chr4_1:69967743-69967762 | None:intergenic | 50.0% |
| TTCTTCGTCGAGATGCATGG+GGG | + | chr4_1:69967757-69967776 | None:intergenic | 50.0% | |
| TGCAGAACATAAGGAGCGGT+TGG | - | chr4_1:69967941-69967960 | Msa0568350:CDS | 50.0% | |
| AGAACATAAGGAGCGGTTGG+CGG | - | chr4_1:69967944-69967963 | Msa0568350:CDS | 50.0% | |
| !! | TTGGTGGAAGGTGTTTGCGA+AGG | + | chr4_1:69968079-69968098 | None:intergenic | 50.0% |
| ! | CCATATGATGGTTTCGGTGC+AGG | + | chr4_1:69968471-69968490 | None:intergenic | 50.0% |
| CCTGCACCGAAACCATCATA+TGG | - | chr4_1:69968468-69968487 | Msa0568350:CDS | 50.0% | |
| !! | AAATTGGTTCAGGTGGGCTG+AGG | - | chr4_1:69968600-69968619 | Msa0568350:intron | 50.0% |
| TGGCTCGATCATCATCATCC+AGG | + | chr4_1:69969188-69969207 | None:intergenic | 50.0% | |
| GTGCCTTGTCCATGAAAGAC+TGG | + | chr4_1:69969248-69969267 | None:intergenic | 50.0% | |
| ! | CTTTCATGGACAAGGCACCT+AGG | - | chr4_1:69969250-69969269 | Msa0568350:intron | 50.0% |
| ! | TTCATGGACAAGGCACCTAG+GGG | - | chr4_1:69969252-69969271 | Msa0568350:intron | 50.0% |
| ! | ACAAGGCACCTAGGGGAAAA+TGG | - | chr4_1:69969259-69969278 | Msa0568350:intron | 50.0% |
| !! | TTGTCTTTTTGGGGGATGGG+AGG | - | chr4_1:69969376-69969395 | Msa0568350:CDS | 50.0% |
| TGTGCGCAAACCTTAGTTCC+AGG | + | chr4_1:69969851-69969870 | None:intergenic | 50.0% | |
| ! | GATGTTTTCCCGTGGAAGTG+TGG | - | chr4_1:69969976-69969995 | Msa0568350:intron | 50.0% |
| !! | TCGTCAGATTGCTCTGGAAC+TGG | + | chr4_1:69970639-69970658 | None:intergenic | 50.0% |
| TTGCACTGTTCTCGACCTGC+CGG | - | chr4_1:69964742-69964761 | Msa0568350:three_prime_UTR | 55.0% | |
| ! | GAAACTCCGGTCGCGTTTTC+CGG | + | chr4_1:69964764-69964783 | None:intergenic | 55.0% |
| GCGCTACCGGAAATGAGAAG+AGG | + | chr4_1:69964826-69964845 | None:intergenic | 55.0% | |
| !!! | TTTTGAGGCGGTGGTGGTCT+GGG | + | chr4_1:69965107-69965126 | None:intergenic | 55.0% |
| !!! | CGCTTTTGAAGCCCGCGTTT+AGG | + | chr4_1:69965943-69965962 | None:intergenic | 55.0% |
| CTTGTCTGCGGAAATCGAGC+TGG | - | chr4_1:69966123-69966142 | Msa0568350:CDS | 55.0% | |
| AGTGATGTCCTCCCTGATCC+TGG | - | chr4_1:69966154-69966173 | Msa0568350:CDS | 55.0% | |
| CCTTTCCGGTTCCAGGATCA+GGG | + | chr4_1:69966168-69966187 | None:intergenic | 55.0% | |
| CCTGATCCTGGAACCGGAAA+GGG | - | chr4_1:69966166-69966185 | Msa0568350:CDS | 55.0% | |
| TCCTGGAACCGGAAAGGGTT+AGG | - | chr4_1:69966171-69966190 | Msa0568350:CDS | 55.0% | |
| TCCTAACCCTTTCCGGTTCC+AGG | + | chr4_1:69966175-69966194 | None:intergenic | 55.0% | |
| GCAGAAGCAGAAGCAGTAGC+TGG | + | chr4_1:69966319-69966338 | None:intergenic | 55.0% | |
| TGGTAAAGAATCCCAGGGCC+AGG | + | chr4_1:69966868-69966887 | None:intergenic | 55.0% | |
| CAATGGGGCAGTCAGGATCA+GGG | + | chr4_1:69967129-69967148 | None:intergenic | 55.0% | |
| TCAATGGGGCAGTCAGGATC+AGG | + | chr4_1:69967130-69967149 | None:intergenic | 55.0% | |
| GCTGGTGTGGAGGATAAAGG+TGG | - | chr4_1:69967446-69967465 | Msa0568350:intron | 55.0% | |
| !! | CATAGTGGACAAGGCTCTGC+TGG | - | chr4_1:69967866-69967885 | Msa0568350:intron | 55.0% |
| !! | CGTGCTGACCATTTTCCCCT+AGG | + | chr4_1:69969270-69969289 | None:intergenic | 55.0% |
| !! | CTTTTTGGGGGATGGGAGGA+AGG | - | chr4_1:69969380-69969399 | Msa0568350:CDS | 55.0% |
| GAGAATGAGGACCCAACACC+TGG | - | chr4_1:69969830-69969849 | Msa0568350:CDS | 55.0% | |
| GGACCCAACACCTGGAACTA+AGG | - | chr4_1:69969838-69969857 | Msa0568350:CDS | 55.0% | |
| AGAGGTTGCAACAGCTGAGC+AGG | - | chr4_1:69970566-69970585 | Msa0568350:CDS | 55.0% | |
| GTTTCCGGCGAGCGAAACTC+CGG | + | chr4_1:69964777-69964796 | None:intergenic | 60.0% | |
| GAGAGGCAGGTTTGCGCCTA+AGG | - | chr4_1:69965076-69965095 | Msa0568350:CDS | 60.0% | |
| ! | GGTGGTCTGGGCTTAGCCTT+AGG | + | chr4_1:69965095-69965114 | None:intergenic | 60.0% |
| !!! | CTTTTGAGGCGGTGGTGGTC+TGG | + | chr4_1:69965108-69965127 | None:intergenic | 60.0% |
| !! | GCGGGCTTCAAAAGCGCTTC+AGG | - | chr4_1:69965947-69965966 | Msa0568350:intron | 60.0% |
| GTCCTCCCTGATCCTGGAAC+CGG | - | chr4_1:69966160-69966179 | Msa0568350:CDS | 60.0% | |
| TTCCGGTTCCAGGATCAGGG+AGG | + | chr4_1:69966165-69966184 | None:intergenic | 60.0% | |
| CCCTGATCCTGGAACCGGAA+AGG | - | chr4_1:69966165-69966184 | Msa0568350:CDS | 60.0% | |
| CCCTTTCCGGTTCCAGGATC+AGG | + | chr4_1:69966169-69966188 | None:intergenic | 60.0% | |
| !! | GGGTACTGGAGGGAGTGGAA+GGG | + | chr4_1:69970312-69970331 | None:intergenic | 60.0% |
| !! | ACGAGAGAGGGGGTACTGGA+GGG | + | chr4_1:69970322-69970341 | None:intergenic | 60.0% |
| !! | TACGAGAGAGGGGGTACTGG+AGG | + | chr4_1:69970323-69970342 | None:intergenic | 60.0% |
| ! | GAGTACGAGAGAGGGGGTAC+TGG | + | chr4_1:69970326-69970345 | None:intergenic | 60.0% |
| TGCAACAGCTGAGCAGGAGC+AGG | - | chr4_1:69970572-69970591 | Msa0568350:CDS | 60.0% | |
| GACCTGCCGGAAAACGCGAC+CGG | - | chr4_1:69964755-69964774 | Msa0568350:three_prime_UTR | 65.0% | |
| !! | GGTTCAGGTGGGCTGAGGCA+TGG | - | chr4_1:69968605-69968624 | Msa0568350:intron | 65.0% |
| !! | TCAGGTGGGCTGAGGCATGG+AGG | - | chr4_1:69968608-69968627 | Msa0568350:intron | 65.0% |
| ! | GTGGGCTGAGGCATGGAGGA+TGG | - | chr4_1:69968612-69968631 | Msa0568350:intron | 65.0% |
| !! | GGGGTACTGGAGGGAGTGGA+AGG | + | chr4_1:69970313-69970332 | None:intergenic | 65.0% |
| !! | AGAGGGGGTACTGGAGGGAG+TGG | + | chr4_1:69970317-69970336 | None:intergenic | 65.0% |
| ! | CTCCGGTCGCGTTTTCCGGC+AGG | + | chr4_1:69964760-69964779 | None:intergenic | 70.0% |
| GCGACCGGAGTTTCGCTCGC+CGG | - | chr4_1:69964770-69964789 | Msa0568350:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 69964657 | 69971030 | 69964657 | ID=Msa0568350;Name=Msa0568350 |
| chr4_1 | mRNA | 69964657 | 69971030 | 69964657 | ID=Msa0568350-mRNA-1;Parent=Msa0568350;Name=Msa0568350-mRNA-1;_AED=0.23;_eAED=0.23;_QI=270|0.93|0.93|1|1|1|16|311|787 |
| chr4_1 | exon | 69964657 | 69965123 | 69964657 | ID=Msa0568350-mRNA-1:exon:23500;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69965828 | 69965952 | 69965828 | ID=Msa0568350-mRNA-1:exon:23499;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69966097 | 69966241 | 69966097 | ID=Msa0568350-mRNA-1:exon:23498;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69966376 | 69966607 | 69966376 | ID=Msa0568350-mRNA-1:exon:23497;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69967583 | 69967626 | 69967583 | ID=Msa0568350-mRNA-1:exon:23496;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69967722 | 69967816 | 69967722 | ID=Msa0568350-mRNA-1:exon:23495;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69967902 | 69968325 | 69967902 | ID=Msa0568350-mRNA-1:exon:23494;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69968396 | 69968578 | 69968396 | ID=Msa0568350-mRNA-1:exon:23493;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69968686 | 69968777 | 69968686 | ID=Msa0568350-mRNA-1:exon:23492;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69968953 | 69969019 | 69968953 | ID=Msa0568350-mRNA-1:exon:23491;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69969098 | 69969240 | 69969098 | ID=Msa0568350-mRNA-1:exon:23490;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69969341 | 69969421 | 69969341 | ID=Msa0568350-mRNA-1:exon:23489;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69969500 | 69969566 | 69969500 | ID=Msa0568350-mRNA-1:exon:23488;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69969651 | 69969922 | 69969651 | ID=Msa0568350-mRNA-1:exon:23487;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69970430 | 69970612 | 69970430 | ID=Msa0568350-mRNA-1:exon:23486;Parent=Msa0568350-mRNA-1 |
| chr4_1 | exon | 69970706 | 69971030 | 69970706 | ID=Msa0568350-mRNA-1:exon:23485;Parent=Msa0568350-mRNA-1 |
| chr4_1 | five_prime_UTR | 69970761 | 69971030 | 69970761 | ID=Msa0568350-mRNA-1:five_prime_utr;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69970706 | 69970760 | 69970706 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69970430 | 69970612 | 69970430 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69969651 | 69969922 | 69969651 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69969500 | 69969566 | 69969500 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69969341 | 69969421 | 69969341 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69969098 | 69969240 | 69969098 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69968953 | 69969019 | 69968953 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69968686 | 69968777 | 69968686 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69968396 | 69968578 | 69968396 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69967902 | 69968325 | 69967902 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69967722 | 69967816 | 69967722 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69967583 | 69967626 | 69967583 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69966376 | 69966607 | 69966376 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69966097 | 69966241 | 69966097 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69965828 | 69965952 | 69965828 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | CDS | 69964968 | 69965123 | 69964968 | ID=Msa0568350-mRNA-1:cds;Parent=Msa0568350-mRNA-1 |
| chr4_1 | three_prime_UTR | 69964657 | 69964967 | 69964657 | ID=Msa0568350-mRNA-1:three_prime_utr;Parent=Msa0568350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
