AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0569160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0569160 MtrunA17_Chr8g0384201 95.927 491 18 2 1 491 1 489 0.0 959
Msa0569160 MtrunA17_Chr8g0364791 71.811 486 88 7 1 485 1 438 0.0 670
Msa0569160 MtrunA17_Chr3g0130101 62.553 235 82 3 1 229 1 235 1.27e-102 311
Msa0569160 MtrunA17_Chr1g0201021 54.857 175 79 0 7 181 20 194 5.17e-65 220
Msa0569160 MtrunA17_Chr1g0197361 54.651 172 72 3 8 176 10 178 8.01e-64 217
Msa0569160 MtrunA17_Chr3g0092671 52.000 175 78 3 7 178 6 177 4.74e-61 209
Msa0569160 MtrunA17_Chr1g0197351 52.660 188 82 2 6 187 42 228 2.84e-56 194
Msa0569160 MtrunA17_Chr6g0481091 52.941 153 72 0 6 158 6 158 2.19e-54 182
Msa0569160 MtrunA17_Chr2g0309891 52.229 157 74 1 1 156 1 157 6.40e-53 182
Msa0569160 MtrunA17_Chr5g0433781 49.112 169 85 1 1 168 1 169 1.08e-50 182
Msa0569160 MtrunA17_Chr3g0109821 49.112 169 84 2 1 167 1 169 5.74e-50 181
Msa0569160 MtrunA17_Chr5g0428991 46.497 157 84 0 1 157 20 176 4.40e-47 172
Msa0569160 MtrunA17_Chr3g0128151 47.436 156 82 0 1 156 17 172 4.69e-46 169
Msa0569160 MtrunA17_Chr4g0056541 45.078 193 96 6 8 196 9 195 4.89e-46 164
Msa0569160 MtrunA17_Chr5g0400461 43.784 185 94 2 1 178 1 182 1.39e-45 162
Msa0569160 MtrunA17_Chr4g0054791 45.455 165 87 1 1 162 1 165 3.33e-45 160
Msa0569160 MtrunA17_Chr2g0309331 45.882 170 84 4 8 175 12 175 4.66e-45 161
Msa0569160 MtrunA17_Chr3g0128111 46.711 152 77 2 7 156 43 192 5.09e-45 158
Msa0569160 MtrunA17_Chr4g0060931 45.912 159 82 2 6 162 17 173 1.77e-44 160
Msa0569160 MtrunA17_Chr4g0076731 44.872 156 77 4 6 158 54 203 2.68e-44 161
Msa0569160 MtrunA17_Chr8g0372121 48.344 151 75 2 8 157 8 156 4.13e-44 157
Msa0569160 MtrunA17_Chr4g0017921 48.701 154 69 3 8 157 10 157 6.32e-44 158
Msa0569160 MtrunA17_Chr4g0018391 35.178 253 140 8 8 249 9 248 6.65e-44 158
Msa0569160 MtrunA17_Chr7g0217721 42.541 181 86 3 5 169 18 196 7.12e-44 158
Msa0569160 MtrunA17_Chr3g0091921 46.541 159 81 2 6 162 16 172 8.29e-44 156
Msa0569160 MtrunA17_Chr1g0200561 47.239 163 77 4 8 166 21 178 9.47e-44 157
Msa0569160 MtrunA17_Chr6g0453451 43.023 172 90 3 5 172 19 186 7.82e-43 154
Msa0569160 MtrunA17_Chr8g0361731 42.593 162 80 4 6 156 14 173 1.10e-42 156
Msa0569160 MtrunA17_Chr6g0453131 44.099 161 78 4 6 156 15 173 1.22e-42 155
Msa0569160 MtrunA17_Chr2g0318081 40.909 176 99 2 1 173 11 184 3.07e-42 154
Msa0569160 MtrunA17_Chr6g0484441 46.358 151 77 2 6 156 5 151 3.28e-42 152
Msa0569160 MtrunA17_Chr5g0398971 45.455 154 77 4 8 157 9 159 3.85e-42 153
Msa0569160 MtrunA17_Chr2g0316971 48.125 160 75 4 6 160 23 179 8.96e-42 153
Msa0569160 MtrunA17_Chr5g0405211 46.104 154 74 3 8 157 10 158 1.29e-41 152
Msa0569160 MtrunA17_Chr5g0417001 42.857 161 80 4 6 156 14 172 1.55e-41 152
Msa0569160 MtrunA17_Chr8g0346001 42.945 163 77 3 8 157 17 176 1.70e-41 153
Msa0569160 MtrunA17_Chr3g0124761 44.586 157 81 3 5 158 6 159 1.37e-40 147
Msa0569160 MtrunA17_Chr2g0318101 37.668 223 118 7 4 212 13 228 1.68e-40 149
Msa0569160 MtrunA17_Chr4g0038751 49.673 153 67 3 7 156 16 161 3.02e-40 147
Msa0569160 MtrunA17_Chr7g0253011 45.912 159 74 4 6 156 17 171 5.60e-40 148
Msa0569160 MtrunA17_Chr7g0217711 47.482 139 71 1 5 143 18 154 2.27e-39 140
Msa0569160 MtrunA17_Chr6g0461661 44.872 156 78 4 6 156 18 170 2.41e-39 146
Msa0569160 MtrunA17_Chr7g0252971 41.463 164 81 3 6 156 8 169 5.54e-39 144
Msa0569160 MtrunA17_Chr3g0139331 42.767 159 85 3 6 162 11 165 5.94e-39 144
Msa0569160 MtrunA17_Chr4g0042561 42.331 163 88 3 2 160 5 165 7.34e-39 142
Msa0569160 MtrunA17_Chr3g0130731 42.038 157 85 3 5 158 6 159 2.11e-38 141
Msa0569160 MtrunA17_Chr8g0359921 43.871 155 79 3 6 156 14 164 2.19e-38 142
Msa0569160 MtrunA17_Chr7g0263931 41.212 165 88 4 5 163 10 171 5.04e-38 141
Msa0569160 MtrunA17_Chr8g0384721 41.139 158 86 3 5 158 6 160 8.50e-38 140
Msa0569160 MtrunA17_Chr5g0417791 43.312 157 83 3 5 157 2 156 1.10e-37 139
Msa0569160 MtrunA17_Chr7g0214071 43.373 166 81 4 5 166 14 170 4.89e-37 137
Msa0569160 MtrunA17_Chr4g0047841 48.485 132 64 2 4 133 13 142 8.74e-37 139
Msa0569160 MtrunA17_Chr8g0345691 44.295 149 74 5 9 154 15 157 2.41e-36 139
Msa0569160 MtrunA17_Chr2g0311651 40.606 165 82 3 7 156 23 186 2.59e-36 136
Msa0569160 MtrunA17_Chr2g0326361 42.581 155 81 4 8 156 16 168 3.77e-36 136
Msa0569160 MtrunA17_Chr2g0312321 42.767 159 82 4 1 156 6 158 5.51e-36 135
Msa0569160 MtrunA17_Chr5g0442771 40.491 163 83 4 6 156 18 178 6.23e-36 135
Msa0569160 MtrunA17_Chr1g0147421 42.857 154 81 4 6 156 27 176 4.93e-35 134
Msa0569160 MtrunA17_Chr2g0311661 47.328 131 64 2 7 133 22 151 6.54e-35 132
Msa0569160 MtrunA17_Chr3g0144271 45.985 137 69 3 6 139 23 157 1.40e-34 134
Msa0569160 MtrunA17_Chr1g0183741 35.096 208 122 6 6 208 10 209 1.99e-34 130
Msa0569160 MtrunA17_Chr8g0345671 43.243 148 75 5 9 153 14 155 3.35e-34 132
Msa0569160 MtrunA17_Chr8g0345711 46.457 127 64 3 9 132 15 140 7.29e-34 125
Msa0569160 MtrunA17_Chr7g0261411 40.789 152 82 3 6 155 10 155 2.27e-33 128
Msa0569160 MtrunA17_Chr8g0385991 39.080 174 91 4 2 168 10 175 2.32e-33 126
Msa0569160 MtrunA17_Chr8g0345741 48.276 116 56 3 19 131 4 118 1.54e-32 121
Msa0569160 MtrunA17_Chr2g0321741 42.969 128 65 2 26 153 12 131 3.60e-32 126
Msa0569160 MtrunA17_Chr3g0131911 37.572 173 94 3 2 164 10 178 4.46e-31 120
Msa0569160 MtrunA17_Chr8g0345721 40.123 162 61 5 9 135 38 198 4.54e-31 119
Msa0569160 MtrunA17_Chr8g0345731 43.846 130 66 4 9 132 27 155 1.68e-30 116
Msa0569160 MtrunA17_Chr3g0113001 41.379 116 60 3 60 169 17 130 9.53e-28 112
Msa0569160 MtrunA17_Chr2g0321631 36.478 159 93 6 8 158 6 164 1.38e-26 108
Msa0569160 MtrunA17_Chr7g0266701 33.962 159 95 4 8 156 6 164 1.28e-25 105
Msa0569160 MtrunA17_Chr8g0345701 39.007 141 66 5 9 132 10 147 7.47e-25 101
Msa0569160 MtrunA17_Chr3g0113031 41.346 104 54 3 72 169 4 106 4.86e-24 101
Msa0569160 MtrunA17_Chr4g0050701 36.250 160 84 5 6 157 11 160 1.20e-23 98.2
Msa0569160 MtrunA17_Chr4g0026141 34.177 158 97 4 8 158 7 164 2.88e-23 99.0
Msa0569160 MtrunA17_Chr7g0243371 51.282 78 34 2 60 133 14 91 4.11e-20 85.9
Msa0569160 MtrunA17_Chr8g0384351 32.317 164 83 7 5 165 9 147 4.84e-17 79.3
Msa0569160 MtrunA17_Chr3g0130321 32.203 177 97 7 5 167 6 173 3.21e-15 74.7
Msa0569160 MtrunA17_Chr7g0251651 30.469 128 85 4 5 131 17 141 4.87e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0569160 AT5G09330.5 51.562 256 110 3 1 244 1 254 2.91e-85 271
Msa0569160 AT5G09330.2 51.562 256 110 3 1 244 1 254 2.91e-85 271
Msa0569160 AT5G09330.4 51.562 256 110 3 1 244 1 254 2.91e-85 271
Msa0569160 AT5G09330.3 51.562 256 110 3 1 244 1 254 2.91e-85 271
Msa0569160 AT5G09330.1 51.562 256 110 3 1 244 1 254 2.91e-85 271
Msa0569160 AT5G64060.1 53.947 228 103 1 1 228 1 226 7.94e-81 255
Msa0569160 AT5G04410.1 55.056 178 80 0 2 179 5 182 1.87e-70 234
Msa0569160 AT3G10500.1 55.294 170 76 0 2 171 5 174 6.87e-68 227
Msa0569160 AT3G10490.1 53.977 176 79 2 6 180 27 201 8.11e-64 207
Msa0569160 AT3G10490.2 48.325 209 106 2 6 213 27 234 5.45e-63 212
Msa0569160 AT3G10480.2 51.562 192 91 2 6 196 27 217 9.46e-63 211
Msa0569160 AT3G10480.1 51.813 193 90 3 6 196 27 218 9.50e-63 211
Msa0569160 AT1G34180.3 46.196 184 93 1 7 184 17 200 3.74e-57 196
Msa0569160 AT1G34190.1 48.276 174 90 0 7 180 17 190 1.16e-56 197
Msa0569160 AT3G10480.3 44.690 226 89 4 6 196 27 251 1.46e-56 197
Msa0569160 AT1G34180.1 46.196 184 93 1 7 184 17 200 2.09e-56 197
Msa0569160 AT3G17730.1 53.797 158 73 0 1 158 1 158 2.19e-55 186
Msa0569160 AT1G34180.4 43.367 196 93 2 7 184 17 212 9.83e-54 187
Msa0569160 AT1G34180.2 43.367 196 93 2 7 184 17 212 5.56e-53 188
Msa0569160 AT1G65910.1 48.503 167 86 0 1 167 1 167 2.10e-51 185
Msa0569160 AT1G33060.1 49.359 156 79 0 1 156 19 174 1.43e-50 183
Msa0569160 AT1G33060.2 49.359 156 79 0 1 156 19 174 1.55e-50 182
Msa0569160 AT2G27300.1 49.673 153 69 2 1 153 9 153 2.40e-49 172
Msa0569160 AT5G24590.2 47.468 158 82 1 1 157 8 165 2.80e-48 172
Msa0569160 AT3G03200.1 50.955 157 76 1 1 156 1 157 1.31e-47 171
Msa0569160 AT3G49530.2 42.857 189 97 2 1 188 8 186 2.94e-47 169
Msa0569160 AT3G49530.1 42.857 189 97 2 1 188 8 186 1.10e-46 169
Msa0569160 AT5G61430.1 47.799 159 79 2 6 162 16 172 1.71e-46 165
Msa0569160 AT5G17260.1 48.408 157 80 1 1 156 1 157 3.41e-46 167
Msa0569160 AT1G54330.1 48.466 163 81 1 1 163 1 160 4.36e-46 163
Msa0569160 AT5G46590.1 48.366 153 77 2 6 156 6 158 1.05e-45 161
Msa0569160 AT4G10350.1 48.052 154 73 2 8 157 11 161 1.38e-45 162
Msa0569160 AT4G17980.1 48.387 155 76 2 6 156 6 160 2.47e-45 159
Msa0569160 AT4G35580.1 45.513 156 85 0 1 156 4 159 3.23e-45 166
Msa0569160 AT4G17980.2 47.500 160 80 2 1 156 1 160 3.36e-45 160
Msa0569160 AT4G35580.2 45.513 156 85 0 1 156 4 159 3.56e-45 166
Msa0569160 AT4G35580.3 45.513 156 85 0 1 156 4 159 3.65e-45 166
Msa0569160 AT1G71930.2 46.203 158 78 3 8 162 11 164 6.99e-45 160
Msa0569160 AT1G71930.1 46.203 158 78 3 8 162 11 164 6.99e-45 160
Msa0569160 AT1G12260.1 42.308 182 98 4 8 187 9 185 1.29e-44 161
Msa0569160 AT1G12260.2 42.308 182 98 4 8 187 9 185 1.37e-44 160
Msa0569160 AT5G22290.1 46.753 154 73 3 1 153 16 161 1.53e-44 160
Msa0569160 AT1G32870.2 48.810 168 82 2 6 171 10 175 1.72e-44 164
Msa0569160 AT1G32870.1 48.810 168 82 2 6 171 10 175 1.95e-44 164
Msa0569160 AT1G69490.1 36.100 241 139 4 6 235 9 245 2.70e-44 157
Msa0569160 AT5G39610.1 47.799 159 79 2 6 162 20 176 2.98e-44 157
Msa0569160 AT3G44290.2 45.395 152 75 2 2 153 10 153 4.78e-44 155
Msa0569160 AT1G62700.1 41.451 193 101 6 8 196 9 193 4.88e-44 160
Msa0569160 AT1G62700.2 41.451 193 101 6 8 196 9 193 4.88e-44 160
Msa0569160 AT5G46590.2 51.852 135 64 1 6 139 6 140 5.05e-44 157
Msa0569160 AT1G32870.3 48.810 168 82 2 6 171 46 211 5.42e-44 163
Msa0569160 AT5G07680.2 45.912 159 82 2 6 162 3 159 2.11e-43 156
Msa0569160 AT5G07680.1 45.912 159 82 2 6 162 17 173 2.65e-43 156
Msa0569160 AT2G02450.1 44.156 154 81 3 6 158 51 200 3.77e-43 157
Msa0569160 AT3G44290.1 45.395 152 75 2 2 153 10 153 4.96e-43 155
Msa0569160 AT2G02450.2 44.156 154 81 3 6 158 51 200 6.38e-43 157
Msa0569160 AT1G33280.1 46.104 154 73 3 8 157 10 157 1.11e-42 154
Msa0569160 AT4G36160.1 44.509 173 82 4 8 177 12 173 1.25e-42 155
Msa0569160 AT4G36160.3 44.509 173 82 4 8 177 12 173 1.25e-42 155
Msa0569160 AT4G36160.2 44.509 173 82 4 8 177 16 177 1.59e-42 155
Msa0569160 AT1G32510.1 43.396 159 82 2 6 156 6 164 2.28e-42 152
Msa0569160 AT2G18060.3 43.353 173 83 4 8 177 11 171 2.36e-42 154
Msa0569160 AT2G18060.1 43.353 173 83 4 8 177 11 171 2.36e-42 154
Msa0569160 AT1G79580.3 47.368 152 75 3 8 157 19 167 6.78e-42 153
Msa0569160 AT1G79580.5 47.368 152 75 3 8 157 19 167 6.78e-42 153
Msa0569160 AT1G79580.4 47.368 152 75 3 8 157 19 167 6.78e-42 153
Msa0569160 AT1G79580.2 47.368 152 75 3 8 157 19 167 6.78e-42 153
Msa0569160 AT1G79580.1 47.368 152 75 3 8 157 19 167 6.78e-42 153
Msa0569160 AT3G12977.1 43.478 161 88 2 1 160 13 171 1.03e-41 150
Msa0569160 AT3G29035.1 44.910 167 88 2 6 170 24 188 1.54e-41 151
Msa0569160 AT1G26870.1 43.827 162 78 4 6 156 16 175 2.00e-41 153
Msa0569160 AT5G62380.2 44.586 157 84 2 2 157 3 157 2.88e-41 151
Msa0569160 AT5G62380.1 44.586 157 84 2 2 157 3 157 2.88e-41 151
Msa0569160 AT2G24430.2 46.405 153 77 3 6 156 16 165 3.33e-41 150
Msa0569160 AT2G24430.1 46.405 153 77 3 6 156 16 165 3.33e-41 150
Msa0569160 AT5G39820.1 41.379 174 77 4 6 156 20 191 3.78e-41 150
Msa0569160 AT3G04060.1 45.223 157 81 3 6 159 20 174 5.42e-41 150
Msa0569160 AT5G08790.1 43.671 158 81 3 6 158 7 161 6.48e-41 148
Msa0569160 AT3G18400.1 43.312 157 86 2 6 162 5 158 7.69e-41 149
Msa0569160 AT1G01720.1 40.426 188 101 4 5 184 6 190 8.19e-41 148
Msa0569160 AT5G18270.1 46.541 159 76 4 6 159 21 175 8.53e-41 149
Msa0569160 AT5G18270.2 47.170 159 75 4 6 159 21 175 1.00e-40 149
Msa0569160 AT4G27410.2 41.212 165 95 1 1 165 9 171 1.02e-40 148
Msa0569160 AT2G43000.1 45.033 151 80 2 7 156 19 167 1.56e-40 147
Msa0569160 AT5G66300.1 43.636 165 89 3 8 170 14 176 2.30e-40 147
Msa0569160 AT1G76420.1 45.806 155 79 3 6 158 22 173 4.56e-40 147
Msa0569160 AT2G46770.1 41.317 167 78 4 8 157 18 181 9.99e-40 147
Msa0569160 AT1G52890.1 40.936 171 95 2 6 172 14 182 1.14e-39 146
Msa0569160 AT3G15500.1 42.038 157 89 1 1 157 9 163 1.29e-39 146
Msa0569160 AT5G53950.1 48.077 156 73 4 6 156 17 169 1.34e-39 147
Msa0569160 AT3G15170.1 45.283 159 81 3 8 162 22 178 1.73e-39 145
Msa0569160 AT3G61910.1 41.566 166 77 3 8 156 13 175 2.27e-39 145
Msa0569160 AT1G77450.1 43.506 154 81 3 8 158 12 162 5.34e-39 142
Msa0569160 AT2G17040.1 45.098 153 74 3 7 156 7 152 9.76e-39 142
Msa0569160 AT4G27410.3 39.548 177 92 2 1 162 9 185 1.68e-38 143
Msa0569160 AT1G32770.1 41.071 168 82 3 5 158 15 179 3.18e-38 143
Msa0569160 AT5G63790.1 41.772 158 84 3 6 158 50 204 5.24e-38 141
Msa0569160 AT5G63790.2 41.772 158 84 3 6 158 60 214 6.13e-38 141
Msa0569160 AT1G61110.1 42.169 166 81 3 4 156 14 177 1.45e-37 140
Msa0569160 AT5G13180.1 45.122 164 82 3 2 163 10 167 2.79e-37 137
Msa0569160 AT1G56010.2 39.227 181 96 4 1 173 14 188 4.04e-37 139
Msa0569160 AT3G15510.1 43.125 160 76 5 10 156 21 178 3.83e-36 137
Msa0569160 AT3G04070.2 42.683 164 78 4 6 156 10 170 4.14e-36 137
Msa0569160 AT5G04395.1 46.575 146 64 2 6 137 28 173 4.20e-36 132
Msa0569160 AT4G01520.1 45.752 153 73 4 9 156 7 154 7.21e-35 132
Msa0569160 AT2G33480.2 44.937 158 76 3 2 157 11 159 1.02e-34 131
Msa0569160 AT2G33480.1 44.937 158 78 2 2 157 11 161 1.98e-34 130
Msa0569160 AT3G04070.1 37.430 179 82 3 6 156 10 186 3.09e-34 132
Msa0569160 AT4G01540.3 45.860 157 75 4 5 156 3 154 3.71e-34 133
Msa0569160 AT4G01540.4 46.405 153 72 4 9 156 7 154 5.52e-34 132
Msa0569160 AT4G01540.2 46.405 153 72 4 9 156 7 154 9.15e-34 132
Msa0569160 AT4G01540.1 46.405 153 72 4 9 156 7 154 1.11e-33 133
Msa0569160 AT3G12910.1 46.212 132 63 3 7 133 22 150 8.43e-33 127
Msa0569160 AT4G28530.1 40.000 170 78 4 5 156 9 172 8.29e-32 125
Msa0569160 AT3G12977.2 49.515 103 51 1 60 161 17 119 2.66e-31 120
Msa0569160 AT5G61430.2 49.524 105 51 1 60 162 5 109 3.92e-31 121
Msa0569160 AT1G52880.1 40.881 159 80 4 10 156 21 177 6.12e-31 122
Msa0569160 AT4G01550.1 40.909 176 85 5 5 170 3 169 6.73e-31 125
Msa0569160 AT3G10490.4 44.444 135 73 2 80 213 1 134 6.73e-31 123
Msa0569160 AT3G10490.3 44.444 135 73 2 80 213 1 134 6.73e-31 123
Msa0569160 AT4G10350.2 49.474 95 48 0 63 157 20 114 2.95e-29 117
Msa0569160 AT1G56010.1 41.026 117 66 1 60 173 5 121 4.27e-26 107
Msa0569160 AT3G44350.2 36.478 159 96 5 5 158 4 162 1.86e-24 102
Msa0569160 AT5G22380.1 34.161 161 99 5 5 158 4 164 9.88e-24 100
Msa0569160 AT3G44350.1 36.943 157 94 5 5 156 4 160 4.53e-23 95.9
Msa0569160 AT1G02230.1 37.333 150 82 5 9 153 6 148 1.14e-22 99.8
Msa0569160 AT3G04420.2 36.667 150 88 3 9 156 6 150 5.66e-22 96.3
Msa0569160 AT3G04420.1 36.667 150 88 3 9 156 6 150 2.68e-21 95.5
Msa0569160 AT2G33480.3 46.316 95 51 0 63 157 10 104 3.79e-21 92.0
Msa0569160 AT1G02250.1 37.984 129 72 3 9 132 6 131 1.83e-20 93.2
Msa0569160 AT5G64530.1 40.152 132 63 5 6 135 3 120 7.97e-19 84.7
Msa0569160 AT5G64530.2 40.152 132 63 5 6 135 3 120 1.32e-18 83.2
Msa0569160 AT1G02220.1 33.108 148 89 4 9 154 6 145 8.09e-18 85.9
Msa0569160 AT2G18060.2 41.758 91 43 2 87 177 3 83 1.02e-17 84.0
Msa0569160 AT4G28530.2 35.878 131 64 3 5 117 9 137 6.54e-17 82.0
Msa0569160 AT2G43000.2 39.535 86 51 1 72 156 4 89 5.52e-16 77.0
Msa0569160 AT5G22290.2 43.478 69 31 2 86 153 1 62 8.91e-16 77.4
Msa0569160 AT1G01010.1 33.333 156 85 6 9 153 6 153 1.59e-15 79.0
Msa0569160 AT3G56530.1 30.872 149 98 3 8 154 54 199 1.49e-14 75.1
Msa0569160 AT3G04430.1 31.159 138 71 6 12 132 6 136 5.38e-12 65.5

Find 171 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCGAAATAAATAAATTTA+TGG 0.150624 4_1:+70978284 Msa0569160:exon
AATCATTCGATCTCCGATTT+AGG 0.156160 4_1:+70975648 Msa0569160:five_prime_UTR
TTATTTCGACTCCAACTTTC+AGG 0.173690 4_1:-70978272 None:intergenic
ATGAAACGAGCTACGGAAAT+TGG 0.193778 4_1:+70976373 Msa0569160:CDS
TTTGATGGCTATACCTAAAT+TGG 0.207613 4_1:+70976039 Msa0569160:exon
CGAAATCCAGGTACCAATTT+AGG 0.218874 4_1:-70976052 None:intergenic
CCTAGGAATGGTGCGCAATA+TGG 0.233667 4_1:+70977070 Msa0569160:CDS
GATTCGGTCGTTGGCTCTTT+TGG 0.241117 4_1:+70978363 Msa0569160:three_prime_UTR
GAAAGACTCATTGTTTGAAT+TGG 0.255251 4_1:+70978387 Msa0569160:three_prime_UTR
TTTCAAACTAGTGGATATAT+TGG 0.258960 4_1:+70977214 Msa0569160:CDS
TTTATAATCACTATTACTAT+TGG 0.266078 4_1:+70978707 Msa0569160:three_prime_UTR
TTATTAACAGTTTGATTGTT+TGG 0.271416 4_1:-70977751 None:intergenic
CGTGGATTGCTCGGCTGAAT+TGG 0.273008 4_1:+70978121 Msa0569160:CDS
TACTTCAGTTATTATTTATT+AGG 0.277257 4_1:-70978439 None:intergenic
CCTGTTTGACATGGATTTGC+AGG 0.278572 4_1:-70977325 None:intergenic
TTATCTCCAAAACGGGGATT+TGG 0.288256 4_1:+70976300 Msa0569160:CDS
AAATAAATTTATGGGTCTTT+CGG 0.292086 4_1:+70978293 Msa0569160:exon
TGTTATTGAATTTGATTTGA+TGG 0.304787 4_1:+70976024 Msa0569160:exon
CCTGTTTGACAAGAATTAAC+AGG 0.308110 4_1:-70977367 None:intergenic
CTCCAGTCTTCCTCATTAAA+TGG 0.323348 4_1:-70977097 None:intergenic
TCAAAATCGTCTTTCGTCAT+TGG 0.330957 4_1:+70975770 Msa0569160:five_prime_UTR
ATCATTCGATCTCCGATTTA+GGG 0.332550 4_1:+70975649 Msa0569160:five_prime_UTR
CTTGCGAGTTCATGTCAAAT+AGG 0.339836 4_1:+70977580 Msa0569160:CDS
GAGCTACGGAAATTGGGTTT+TGG 0.345895 4_1:+70976380 Msa0569160:CDS
TCCGTAGCTCGTTTCATCCT+TGG 0.348857 4_1:-70976367 None:intergenic
CTTCTATACTTCTTCTCAAT+AGG 0.349880 4_1:-70976340 None:intergenic
TTATTAACAGCTTGATTGTC+TGG 0.351063 4_1:-70977640 None:intergenic
TTTGGATATGAATCATTTGC+AGG 0.354641 4_1:-70977733 None:intergenic
TTATAATCACTATTACTATT+GGG 0.356431 4_1:+70978708 Msa0569160:three_prime_UTR
TGATTAAATACTTTCTTAAG+AGG 0.359307 4_1:+70976098 Msa0569160:CDS
TCTGTTTGACATGAATTTGC+AGG 0.364697 4_1:-70977538 None:intergenic
CCTGTTTGACATGAATTTGC+TGG 0.368512 4_1:-70977412 None:intergenic
AAAGACTCATTGTTTGAATT+GGG 0.372414 4_1:+70978388 Msa0569160:three_prime_UTR
AATTATCTTATCTCCAAAAC+GGG 0.377898 4_1:+70976293 Msa0569160:CDS
ACCACTCCAAATCCCCGTTT+TGG 0.379266 4_1:-70976306 None:intergenic
TGTCCCTTTAGAACCTTGTT+TGG 0.382586 4_1:+70978747 Msa0569160:three_prime_UTR
TCTGGATATGAATCATTTGC+AGG 0.389690 4_1:-70977622 None:intergenic
GCATGACGACTTCGATTTCA+TGG 0.391062 4_1:+70978208 Msa0569160:CDS
GTCGAAATAAATAAATTTAT+GGG 0.392754 4_1:+70978285 Msa0569160:exon
CCTGTTAATTCTTGTCAAAC+AGG 0.394873 4_1:+70977367 Msa0569160:CDS
CACACACGGACTGGCTTCTA+CGG 0.395311 4_1:+70978172 Msa0569160:CDS
TGACAAGAATTCACAGGGTC+TGG 0.397096 4_1:-70977490 None:intergenic
CCTGTGAATTCTTGTCAAAC+AGG 0.404297 4_1:+70977496 Msa0569160:CDS
TGACAAGAATTAACAGGGTC+TGG 0.407202 4_1:-70977361 None:intergenic
TGACATGGATTTGCAGGGTC+AGG 0.408876 4_1:-70977319 None:intergenic
GCTTCTACGGGCAATGTTGT+GGG 0.411525 4_1:+70978185 Msa0569160:CDS
ATTAGATGTCACAGGCAAAC+TGG 0.412373 4_1:-70977167 None:intergenic
TCGACTCCAACTTTCAGGTT+GGG 0.415732 4_1:-70978267 None:intergenic
TTATGAACCTTGGCAGACTT+TGG 0.423046 4_1:+70975740 Msa0569160:five_prime_UTR
ATCAGAATTGGTGCCTTCTC+CGG 0.423053 4_1:+70977258 Msa0569160:CDS
CTGTTTGACATGAATTTGTT+GGG 0.425559 4_1:-70977282 None:intergenic
TGACATGAACTCGCAAGGTC+AGG 0.427713 4_1:-70977574 None:intergenic
CCAACAAATTCATGTCAAAC+AGG 0.430400 4_1:+70977283 Msa0569160:CDS
GTGGATTGCTCGGCTGAATT+GGG 0.430538 4_1:+70978122 Msa0569160:CDS
GGCTTCTACGGGCAATGTTG+TGG 0.430701 4_1:+70978184 Msa0569160:CDS
CCTGTTTGACATGAATTTGT+TGG 0.430797 4_1:-70977283 None:intergenic
GAATTATCTTATCTCCAAAA+CGG 0.437695 4_1:+70976292 Msa0569160:intron
TTGTCCAAACAAGGTTCTAA+AGG 0.439194 4_1:-70978751 None:intergenic
ATATATACAAATACGCTCCT+TGG 0.443195 4_1:+70976167 Msa0569160:CDS
TGAAACGAGCTACGGAAATT+GGG 0.444296 4_1:+70976374 Msa0569160:CDS
CCTGCAAATCCATGTCAAAC+AGG 0.444856 4_1:+70977325 Msa0569160:CDS
GGCTGACAAAGGAATTGTTC+AGG 0.445801 4_1:+70976549 Msa0569160:CDS
CCATATTGCGCACCATTCCT+AGG 0.447039 4_1:-70977070 None:intergenic
GGATTTCGATTCTCTCCAAC+GGG 0.448332 4_1:+70976067 Msa0569160:CDS
AAGAGAGCGAAAACATAAAT+CGG 0.450232 4_1:-70975618 None:intergenic
GTGTGCTAAAGTCTGCATTC+TGG 0.450394 4_1:-70978154 None:intergenic
CTAGGAATGGTGCGCAATAT+GGG 0.452600 4_1:+70977071 Msa0569160:CDS
TGACATGAATTTGTTGGGTC+CGG 0.453148 4_1:-70977277 None:intergenic
ATCTAGACTCTGATACGTTC+TGG 0.454030 4_1:+70978240 Msa0569160:CDS
TCGGCTGAATTGGGATCTGC+TGG 0.459546 4_1:+70978131 Msa0569160:CDS
TGAGTATAGGCTTGAAGATA+AGG 0.460176 4_1:+70976522 Msa0569160:CDS
CTAGGAGGTGATTCGGTCGT+TGG 0.461138 4_1:+70978354 Msa0569160:three_prime_UTR
GTCATCGGCAAACCCTAAAT+CGG 0.463051 4_1:-70975661 None:intergenic
TGTCCAAACAAGGTTCTAAA+GGG 0.463866 4_1:-70978750 None:intergenic
CCAGCAAATTCATGTCAAAC+AGG 0.464214 4_1:+70977412 Msa0569160:CDS
CTATTGCTGTTGTGCTGGCT+AGG 0.464797 4_1:+70978336 Msa0569160:three_prime_UTR
GAATTCACAGGGTCTGGATA+AGG 0.466095 4_1:-70977484 None:intergenic
TGAAAAGAATGTAAAGGGTC+AGG 0.467715 4_1:-70977448 None:intergenic
TATGAATCATTTGCAGGGTC+AGG 0.468577 4_1:-70977616 None:intergenic
TATGAATCATTTGCAGGGTC+GGG 0.476385 4_1:-70977727 None:intergenic
CATGCCGTGTCAATCAGAAT+TGG 0.476656 4_1:+70977246 Msa0569160:CDS
GAATTAACAGGGTCTGGATA+AGG 0.476908 4_1:-70977355 None:intergenic
CTTTCTTAAGAGGAAAGTGT+TGG 0.477525 4_1:+70976108 Msa0569160:CDS
TCATTTGCAGGGTCGGGCGC+AGG 0.479506 4_1:-70977721 None:intergenic
ATTGGGTTATGCATGAGTAT+AGG 0.479985 4_1:+70976509 Msa0569160:CDS
AGTGCAGCCGATTCCGCAAA+AGG 0.480373 4_1:-70977139 None:intergenic
GAATTTGCAGGGTCGGAAGC+AGG 0.480953 4_1:-70977526 None:intergenic
TGACATGAATTTGCTGGGTC+GGG 0.482049 4_1:-70977406 None:intergenic
TTCGACTCCAACTTTCAGGT+TGG 0.483370 4_1:-70978268 None:intergenic
TTTCTTAAGAGGAAAGTGTT+GGG 0.484499 4_1:+70976109 Msa0569160:CDS
CTGTTTGAAAAGAATGTAAA+GGG 0.489842 4_1:-70977453 None:intergenic
GAGCACTATTGCTGTTGTGC+TGG 0.491980 4_1:+70978331 Msa0569160:three_prime_UTR
GACCATTTAATGAGGAAGAC+TGG 0.495616 4_1:+70977095 Msa0569160:CDS
TCGTGGTGATCGAACCGATT+GGG 0.500477 4_1:+70976492 Msa0569160:CDS
GGCAGACCCAACCTGAAAGT+TGG 0.501795 4_1:+70978261 Msa0569160:CDS
GTGAATAAACACGCTCTTGG+TGG 0.502131 4_1:+70978657 Msa0569160:three_prime_UTR
GAATTTGTTGGGTCCGGAGA+AGG 0.503131 4_1:-70977271 None:intergenic
CGTTCTTGCTTTATGAACCT+TGG 0.503227 4_1:+70975730 Msa0569160:five_prime_UTR
CCTGTTTGAAAAGAATGTAA+AGG 0.504024 4_1:-70977454 None:intergenic
CTGTTTGACATGAATTTGCT+GGG 0.507084 4_1:-70977411 None:intergenic
CCTGTTTGACAAGAATTCAC+AGG 0.507170 4_1:-70977496 None:intergenic
AGACTTTAGCACACACGGAC+TGG 0.509776 4_1:+70978163 Msa0569160:CDS
TTGACATGAATTTGCTGGGT+CGG 0.510788 4_1:-70977407 None:intergenic
TATATACAAATACGCTCCTT+GGG 0.512611 4_1:+70976168 Msa0569160:CDS
ATATGAATCATTTGCAGGGT+CGG 0.522037 4_1:-70977728 None:intergenic
GAATTTGCTGGGTCGGGAGA+CGG 0.524781 4_1:-70977400 None:intergenic
ATTGTGAATAAACACGCTCT+TGG 0.529790 4_1:+70978654 Msa0569160:three_prime_UTR
CTGTTTGACATGAATTTGCA+GGG 0.530109 4_1:-70977537 None:intergenic
CTCGTGGTGATCGAACCGAT+TGG 0.531457 4_1:+70976491 Msa0569160:CDS
GGATTCCTACGTAATCTGTA+AGG 0.535028 4_1:+70977024 Msa0569160:intron
GAATGTAAAGGGTCAGGAGA+AGG 0.535783 4_1:-70977442 None:intergenic
AAAGCAAGAACGGTGGCGAA+CGG 0.541820 4_1:-70975719 None:intergenic
TTGAGAAGGTATAGAGTCAT+CGG 0.542248 4_1:-70975676 None:intergenic
GACATGAACTCGCAAGGTCA+GGG 0.545876 4_1:-70977573 None:intergenic
CTGTTTGACATGGATTTGCA+GGG 0.546270 4_1:-70977324 None:intergenic
TAGGCTTGAAGATAAGGACT+TGG 0.547580 4_1:+70976528 Msa0569160:CDS
GTGCTGGCTAGGAGGTGATT+CGG 0.549389 4_1:+70978347 Msa0569160:three_prime_UTR
CAACAGAATAATCAAACGGT+GGG 0.550179 4_1:+70976430 Msa0569160:CDS
CAATTCTGATTGACACGGCA+TGG 0.550897 4_1:-70977245 None:intergenic
ATACTCATGCATAACCCAAT+CGG 0.550912 4_1:-70976506 None:intergenic
TTTCTGAGATACGAGGATTG+AGG 0.552278 4_1:+70975930 Msa0569160:five_prime_UTR
TTGACATGAATTTGCAGGGT+CGG 0.556895 4_1:-70977533 None:intergenic
GCTATACCTAAATTGGTACC+TGG 0.560520 4_1:+70976046 Msa0569160:CDS
GGCATAAATCCTGTTTGACA+TGG 0.562278 4_1:-70977334 None:intergenic
CTTGGAAGACGTGGATTGCT+CGG 0.562682 4_1:+70978112 Msa0569160:CDS
ACACACGGACTGGCTTCTAC+GGG 0.563688 4_1:+70978173 Msa0569160:CDS
GACTGGAGTGATGATGAAGT+AGG 0.564465 4_1:+70977112 Msa0569160:CDS
TTAATCAATTCAACTCCCGT+TGG 0.567688 4_1:-70976082 None:intergenic
GGATTTGCAGGGTCAGGAGA+AGG 0.569179 4_1:-70977313 None:intergenic
GATAAGGACTTGGCTGACAA+AGG 0.573980 4_1:+70976538 Msa0569160:CDS
GTTAATTCTTGTCAAACAGG+AGG 0.576417 4_1:+70977370 Msa0569160:CDS
GTTGGAGAGAATCGAAATCC+AGG 0.580453 4_1:-70976064 None:intergenic
ACAGAACAATTAGATGTCAC+AGG 0.589124 4_1:-70977175 None:intergenic
GAAGGTCCTGGTCCTAGGAA+TGG 0.591114 4_1:+70977058 Msa0569160:CDS
CTGTTTGACAAGAATTCACA+GGG 0.591836 4_1:-70977495 None:intergenic
CTTCTACGGGCAATGTTGTG+GGG 0.592770 4_1:+70978186 Msa0569160:CDS
TTGGATATGAATCATTTGCA+GGG 0.592806 4_1:-70977732 None:intergenic
AGAAGTATAGAAGTGGGCCA+AGG 0.595153 4_1:+70976350 Msa0569160:CDS
TCATTTGCAGGGTCAGGCAA+AGG 0.595550 4_1:-70977610 None:intergenic
TGGATTTCGATTCTCTCCAA+CGG 0.596015 4_1:+70976066 Msa0569160:CDS
ATTGAGAAGAAGTATAGAAG+TGG 0.596690 4_1:+70976343 Msa0569160:CDS
TACGCTCCTTGGGATCTCCC+AGG 0.603024 4_1:+70976178 Msa0569160:CDS
TTGCTGTTGTGCTGGCTAGG+AGG 0.605092 4_1:+70978339 Msa0569160:three_prime_UTR
AAACTACCTGGGAGATCCCA+AGG 0.605145 4_1:-70976184 None:intergenic
CAAGGTTCATAAAGCAAGAA+CGG 0.608438 4_1:-70975729 None:intergenic
TGTTCAACAGAATAATCAAA+CGG 0.610587 4_1:+70976426 Msa0569160:CDS
CTGGATATGAATCATTTGCA+GGG 0.611969 4_1:-70977621 None:intergenic
TGCGCACCATTCCTAGGACC+AGG 0.613457 4_1:-70977064 None:intergenic
CTATTTGACATGAACTCGCA+AGG 0.614626 4_1:-70977579 None:intergenic
CTGTTTGACAAGAATTAACA+GGG 0.620690 4_1:-70977366 None:intergenic
AAAACCCTAATATTTCACAC+TGG 0.629779 4_1:+70976460 Msa0569160:CDS
GCCAAGGATGAAACGAGCTA+CGG 0.632310 4_1:+70976366 Msa0569160:CDS
ATATGGGAGACCATTTAATG+AGG 0.637886 4_1:+70977087 Msa0569160:CDS
TCCAAAACGGGGATTTGGAG+TGG 0.639502 4_1:+70976305 Msa0569160:CDS
ATTCAATCAAATCACAACTG+AGG 0.639509 4_1:-70975980 None:intergenic
ACATGAACTCGCAAGGTCAG+GGG 0.640717 4_1:-70977572 None:intergenic
TTGAGAAGAAGTATAGAAGT+GGG 0.641662 4_1:+70976344 Msa0569160:CDS
AAGAACACCAAAGTCTGCCA+AGG 0.647439 4_1:-70975747 None:intergenic
ATAAGAAAATTGTCCAAACA+AGG 0.650817 4_1:-70978760 None:intergenic
AATGCAGACTTTAGCACACA+CGG 0.659462 4_1:+70978158 Msa0569160:CDS
GGCACCAATTCTGATTGACA+CGG 0.665036 4_1:-70977250 None:intergenic
AACAGAATAATCAAACGGTG+GGG 0.675165 4_1:+70976431 Msa0569160:CDS
AAATACCTTACAGATTACGT+AGG 0.675415 4_1:-70977029 None:intergenic
GAACTCGCAAGGTCAGGGGA+CGG 0.679790 4_1:-70977568 None:intergenic
TCAACAGAATAATCAAACGG+TGG 0.680625 4_1:+70976429 Msa0569160:CDS
TGTCAGGAAAACATTGCTGA+AGG 0.693858 4_1:+70978062 Msa0569160:intron
ATTATCTTATCTCCAAAACG+GGG 0.700642 4_1:+70976294 Msa0569160:CDS
AGACAACGGTGTATTGCCTG+AGG 0.701304 4_1:+70977813 Msa0569160:CDS
CACACTGGAAAATCACCTCG+TGG 0.720810 4_1:+70976475 Msa0569160:CDS
GGTTCATAAAGCAAGAACGG+TGG 0.736733 4_1:-70975726 None:intergenic
CAATCGGTTCGATCACCACG+AGG 0.739524 4_1:-70976490 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACATAATTCTATTTCA+AGG - chr4_1:70976760-70976779 None:intergenic 15.0%
!!! ATAGAATTATGTTATTTCAT+TGG + chr4_1:70976764-70976783 Msa0569160:intron 15.0%
!! AAATAATTAAAAGAAAGCAA+GGG - chr4_1:70976941-70976960 None:intergenic 15.0%
!! AGTCGAAATAAATAAATTTA+TGG + chr4_1:70978284-70978303 Msa0569160:exon 15.0%
!! GTCGAAATAAATAAATTTAT+GGG + chr4_1:70978285-70978304 Msa0569160:exon 15.0%
!! TACTTCAGTTATTATTTATT+AGG - chr4_1:70978442-70978461 None:intergenic 15.0%
!! TTTATAATCACTATTACTAT+TGG + chr4_1:70978707-70978726 Msa0569160:three_prime_UTR 15.0%
!! TTATAATCACTATTACTATT+GGG + chr4_1:70978708-70978727 Msa0569160:three_prime_UTR 15.0%
!!! ACTTGATCAATTTTCAATTA+GGG + chr4_1:70975793-70975812 Msa0569160:five_prime_UTR 20.0%
!!! TGTTATTGAATTTGATTTGA+TGG + chr4_1:70976024-70976043 Msa0569160:exon 20.0%
!! TGATTAAATACTTTCTTAAG+AGG + chr4_1:70976098-70976117 Msa0569160:CDS 20.0%
!!! TTTTTTTCACCAATTTAGTA+TGG + chr4_1:70976204-70976223 Msa0569160:intron 20.0%
!!! TGTTTTATATGAGCTTTATA+TGG + chr4_1:70976591-70976610 Msa0569160:intron 20.0%
!!! TTTAAAGTAGTTGTAATATG+TGG - chr4_1:70976637-70976656 None:intergenic 20.0%
!! AGTAAAAAATGCACTTTATA+AGG - chr4_1:70976817-70976836 None:intergenic 20.0%
!! CAAATAATTAAAAGAAAGCA+AGG - chr4_1:70976942-70976961 None:intergenic 20.0%
!! TTATTAACAGTTTGATTGTT+TGG - chr4_1:70977754-70977773 None:intergenic 20.0%
!! AAATAAATTTATGGGTCTTT+CGG + chr4_1:70978293-70978312 Msa0569160:exon 20.0%
!! GACTTGATCAATTTTCAATT+AGG + chr4_1:70975792-70975811 Msa0569160:five_prime_UTR 25.0%
! GAAAAAACACCATACTAAAT+TGG - chr4_1:70976216-70976235 None:intergenic 25.0%
!!! ATTTAGTATGGTGTTTTTTC+AGG + chr4_1:70976216-70976235 Msa0569160:intron 25.0%
! GAATTATCTTATCTCCAAAA+CGG + chr4_1:70976292-70976311 Msa0569160:intron 25.0%
! AATTATCTTATCTCCAAAAC+GGG + chr4_1:70976293-70976312 Msa0569160:CDS 25.0%
! TGTTCAACAGAATAATCAAA+CGG + chr4_1:70976426-70976445 Msa0569160:CDS 25.0%
!! TTTTCCAGTGTGAAATATTA+GGG - chr4_1:70976467-70976486 None:intergenic 25.0%
!! ATTTTCCAGTGTGAAATATT+AGG - chr4_1:70976468-70976487 None:intergenic 25.0%
! TTACAACTACTTTAAATGCT+AGG + chr4_1:70976641-70976660 Msa0569160:intron 25.0%
! TACAACTACTTTAAATGCTA+GGG + chr4_1:70976642-70976661 Msa0569160:intron 25.0%
!!! ATGTTTTTAACAAGTTCTCT+TGG + chr4_1:70976994-70977013 Msa0569160:intron 25.0%
!! TGTAAGGTATTTCAAAAAGA+AGG + chr4_1:70977040-70977059 Msa0569160:CDS 25.0%
!! TTTCAAACTAGTGGATATAT+TGG + chr4_1:70977214-70977233 Msa0569160:CDS 25.0%
! CTGTTTGAAAAGAATGTAAA+GGG - chr4_1:70977456-70977475 None:intergenic 25.0%
!! CTTGATATTTTCAAAGACAA+CGG + chr4_1:70977691-70977710 Msa0569160:CDS 25.0%
!!! CTTGATATTTTTGAAGACAA+CGG + chr4_1:70977799-70977818 Msa0569160:CDS 25.0%
!!! TGATGTTTCTTTTTTATGTC+TGG + chr4_1:70977887-70977906 Msa0569160:intron 25.0%
! ATCGCTATGATTTAGTAAAA+TGG - chr4_1:70977989-70978008 None:intergenic 25.0%
! AAAGACTCATTGTTTGAATT+GGG + chr4_1:70978388-70978407 Msa0569160:three_prime_UTR 25.0%
!! TTTTCTCAGACAATTATCAA+AGG - chr4_1:70978635-70978654 None:intergenic 25.0%
AAGAGAGCGAAAACATAAAT+CGG - chr4_1:70975621-70975640 None:intergenic 30.0%
ATTCAATCAAATCACAACTG+AGG - chr4_1:70975983-70976002 None:intergenic 30.0%
! TTTGATGGCTATACCTAAAT+TGG + chr4_1:70976039-70976058 Msa0569160:exon 30.0%
!! TTTCTTAAGAGGAAAGTGTT+GGG + chr4_1:70976109-70976128 Msa0569160:CDS 30.0%
ATATATACAAATACGCTCCT+TGG + chr4_1:70976167-70976186 Msa0569160:CDS 30.0%
TATATACAAATACGCTCCTT+GGG + chr4_1:70976168-70976187 Msa0569160:CDS 30.0%
ATTGGTGAAAAAAACTACCT+GGG - chr4_1:70976198-70976217 None:intergenic 30.0%
AATTGGTGAAAAAAACTACC+TGG - chr4_1:70976199-70976218 None:intergenic 30.0%
ATTATCTTATCTCCAAAACG+GGG + chr4_1:70976294-70976313 Msa0569160:CDS 30.0%
CTTCTATACTTCTTCTCAAT+AGG - chr4_1:70976343-70976362 None:intergenic 30.0%
! ATTGAGAAGAAGTATAGAAG+TGG + chr4_1:70976343-70976362 Msa0569160:CDS 30.0%
! TTGAGAAGAAGTATAGAAGT+GGG + chr4_1:70976344-70976363 Msa0569160:CDS 30.0%
AAAACCCTAATATTTCACAC+TGG + chr4_1:70976460-70976479 Msa0569160:CDS 30.0%
TACTTTAAATGCTAGGGTTA+GGG + chr4_1:70976648-70976667 Msa0569160:intron 30.0%
AAATACCTTACAGATTACGT+AGG - chr4_1:70977032-70977051 None:intergenic 30.0%
! GATCAGAATTTTCAAACTAG+TGG + chr4_1:70977205-70977224 Msa0569160:CDS 30.0%
! CTGTTTGACATGAATTTGTT+GGG - chr4_1:70977285-70977304 None:intergenic 30.0%
CTGTTTGACAAGAATTAACA+GGG - chr4_1:70977369-70977388 None:intergenic 30.0%
CCTGTTTGAAAAGAATGTAA+AGG - chr4_1:70977457-70977476 None:intergenic 30.0%
! CCTTTACATTCTTTTCAAAC+AGG + chr4_1:70977454-70977473 Msa0569160:CDS 30.0%
TTATTAACAGCTTGATTGTC+TGG - chr4_1:70977643-70977662 None:intergenic 30.0%
TTGGATATGAATCATTTGCA+GGG - chr4_1:70977735-70977754 None:intergenic 30.0%
TTTGGATATGAATCATTTGC+AGG - chr4_1:70977736-70977755 None:intergenic 30.0%
! TCCTTTTACTTGTGATTTTC+TGG + chr4_1:70977856-70977875 Msa0569160:intron 30.0%
TCCAGAAAATCACAAGTAAA+AGG - chr4_1:70977860-70977879 None:intergenic 30.0%
TATAGTCCTTGATTTCTTGA+AGG + chr4_1:70978012-70978031 Msa0569160:intron 30.0%
AGTTATCCTTCAAGAAATCA+AGG - chr4_1:70978021-70978040 None:intergenic 30.0%
!! CTGAGTTTTGACATTGTTAT+TGG + chr4_1:70978039-70978058 Msa0569160:intron 30.0%
!!! CTCTTAACTGACTTTTTTGA+TGG + chr4_1:70978089-70978108 Msa0569160:CDS 30.0%
GAAAGACTCATTGTTTGAAT+TGG + chr4_1:70978387-70978406 Msa0569160:three_prime_UTR 30.0%
AATCATTCGATCTCCGATTT+AGG + chr4_1:70975648-70975667 Msa0569160:five_prime_UTR 35.0%
ATCATTCGATCTCCGATTTA+GGG + chr4_1:70975649-70975668 Msa0569160:five_prime_UTR 35.0%
! TTGAGAAGGTATAGAGTCAT+CGG - chr4_1:70975679-70975698 None:intergenic 35.0%
CAAGGTTCATAAAGCAAGAA+CGG - chr4_1:70975732-70975751 None:intergenic 35.0%
TCAAAATCGTCTTTCGTCAT+TGG + chr4_1:70975770-70975789 Msa0569160:five_prime_UTR 35.0%
!!! TAATCGTTTTCTGAGATACG+AGG + chr4_1:70975923-70975942 Msa0569160:five_prime_UTR 35.0%
TTAATCAATTCAACTCCCGT+TGG - chr4_1:70976085-70976104 None:intergenic 35.0%
! CTTTCTTAAGAGGAAAGTGT+TGG + chr4_1:70976108-70976127 Msa0569160:CDS 35.0%
TCAACAGAATAATCAAACGG+TGG + chr4_1:70976429-70976448 Msa0569160:CDS 35.0%
CAACAGAATAATCAAACGGT+GGG + chr4_1:70976430-70976449 Msa0569160:CDS 35.0%
AACAGAATAATCAAACGGTG+GGG + chr4_1:70976431-70976450 Msa0569160:CDS 35.0%
ATACTCATGCATAACCCAAT+CGG - chr4_1:70976509-70976528 None:intergenic 35.0%
ATTGGGTTATGCATGAGTAT+AGG + chr4_1:70976509-70976528 Msa0569160:CDS 35.0%
TGAGTATAGGCTTGAAGATA+AGG + chr4_1:70976522-70976541 Msa0569160:CDS 35.0%
CTACTTTAAATGCTAGGGTT+AGG + chr4_1:70976647-70976666 Msa0569160:intron 35.0%
!! TTCATGATAGTTTTGCATGC+AGG + chr4_1:70976729-70976748 Msa0569160:intron 35.0%
!! CATTGGTTGTTTCTAATCAC+TGG + chr4_1:70976781-70976800 Msa0569160:intron 35.0%
AACATATTCGCAACGAGAAT+AGG - chr4_1:70976979-70976998 None:intergenic 35.0%
GTATTTCAAAAAGAAGGTCC+TGG + chr4_1:70977046-70977065 Msa0569160:CDS 35.0%
ATATGGGAGACCATTTAATG+AGG + chr4_1:70977087-70977106 Msa0569160:CDS 35.0%
! TGAAGTAGGAATACCTTTTG+CGG + chr4_1:70977126-70977145 Msa0569160:CDS 35.0%
ACAGAACAATTAGATGTCAC+AGG - chr4_1:70977178-70977197 None:intergenic 35.0%
CCTGTTTGACATGAATTTGT+TGG - chr4_1:70977286-70977305 None:intergenic 35.0%
CCAACAAATTCATGTCAAAC+AGG + chr4_1:70977283-70977302 Msa0569160:CDS 35.0%
CCTGTTTGACAAGAATTAAC+AGG - chr4_1:70977370-70977389 None:intergenic 35.0%
CCTGTTAATTCTTGTCAAAC+AGG + chr4_1:70977367-70977386 Msa0569160:CDS 35.0%
GTTAATTCTTGTCAAACAGG+AGG + chr4_1:70977370-70977389 Msa0569160:CDS 35.0%
! CTGTTTGACATGAATTTGCT+GGG - chr4_1:70977414-70977433 None:intergenic 35.0%
TGAAAAGAATGTAAAGGGTC+AGG - chr4_1:70977451-70977470 None:intergenic 35.0%
CTGTTTGACAAGAATTCACA+GGG - chr4_1:70977498-70977517 None:intergenic 35.0%
CTGTTTGACATGAATTTGCA+GGG - chr4_1:70977540-70977559 None:intergenic 35.0%
TCTGTTTGACATGAATTTGC+AGG - chr4_1:70977541-70977560 None:intergenic 35.0%
CTGGATATGAATCATTTGCA+GGG - chr4_1:70977624-70977643 None:intergenic 35.0%
TCTGGATATGAATCATTTGC+AGG - chr4_1:70977625-70977644 None:intergenic 35.0%
ATATGAATCATTTGCAGGGT+CGG - chr4_1:70977620-70977639 None:intergenic 35.0%
AAAACAGATTAGCATACCTC+AGG - chr4_1:70977832-70977851 None:intergenic 35.0%
AAAATGGCATCAACAGTATG+AGG - chr4_1:70977973-70977992 None:intergenic 35.0%
! TTGACATTGTTATTGGTGTC+AGG + chr4_1:70978046-70978065 Msa0569160:intron 35.0%
!!! AACTGACTTTTTTGATGGCT+TGG + chr4_1:70978094-70978113 Msa0569160:CDS 35.0%
TTATTTCGACTCCAACTTTC+AGG - chr4_1:70978275-70978294 None:intergenic 35.0%
! ACTGAAGTATTATACCCACT+TGG + chr4_1:70978453-70978472 Msa0569160:intron 35.0%
! CTGAAGTATTATACCCACTT+GGG + chr4_1:70978454-70978473 Msa0569160:intron 35.0%
ACTAAATAGCCCACCTAAAT+TGG - chr4_1:70978552-70978571 None:intergenic 35.0%
ATTGTGAATAAACACGCTCT+TGG + chr4_1:70978654-70978673 Msa0569160:three_prime_UTR 35.0%
!! ACGATGATGCACTTTTGAGA+AGG - chr4_1:70975693-70975712 None:intergenic 40.0%
CGTTCTTGCTTTATGAACCT+TGG + chr4_1:70975730-70975749 Msa0569160:five_prime_UTR 40.0%
TTATGAACCTTGGCAGACTT+TGG + chr4_1:70975740-70975759 Msa0569160:five_prime_UTR 40.0%
!! TTTCTGAGATACGAGGATTG+AGG + chr4_1:70975930-70975949 Msa0569160:five_prime_UTR 40.0%
GCTATACCTAAATTGGTACC+TGG + chr4_1:70976046-70976065 Msa0569160:CDS 40.0%
CGAAATCCAGGTACCAATTT+AGG - chr4_1:70976055-70976074 None:intergenic 40.0%
TGGATTTCGATTCTCTCCAA+CGG + chr4_1:70976066-70976085 Msa0569160:CDS 40.0%
TTATCTCCAAAACGGGGATT+TGG + chr4_1:70976300-70976319 Msa0569160:CDS 40.0%
ATGAAACGAGCTACGGAAAT+TGG + chr4_1:70976373-70976392 Msa0569160:CDS 40.0%
TGAAACGAGCTACGGAAATT+GGG + chr4_1:70976374-70976393 Msa0569160:CDS 40.0%
!!! ATTGGGTTTTGGAAAGCTAC+TGG + chr4_1:70976391-70976410 Msa0569160:CDS 40.0%
TAGGCTTGAAGATAAGGACT+TGG + chr4_1:70976528-70976547 Msa0569160:CDS 40.0%
TATTCGCAACGAGAATAGGA+TGG - chr4_1:70976975-70976994 None:intergenic 40.0%
ACAAGTTCTCTTGGTATGAC+AGG + chr4_1:70977003-70977022 Msa0569160:intron 40.0%
GGATTCCTACGTAATCTGTA+AGG + chr4_1:70977024-70977043 Msa0569160:intron 40.0%
GACCATTTAATGAGGAAGAC+TGG + chr4_1:70977095-70977114 Msa0569160:CDS 40.0%
CTCCAGTCTTCCTCATTAAA+TGG - chr4_1:70977100-70977119 None:intergenic 40.0%
! AGGAATACCTTTTGCGGAAT+CGG + chr4_1:70977132-70977151 Msa0569160:CDS 40.0%
ATTAGATGTCACAGGCAAAC+TGG - chr4_1:70977170-70977189 None:intergenic 40.0%
!! TGACATGAATTTGTTGGGTC+CGG - chr4_1:70977280-70977299 None:intergenic 40.0%
CTGTTTGACATGGATTTGCA+GGG - chr4_1:70977327-70977346 None:intergenic 40.0%
GGCATAAATCCTGTTTGACA+TGG - chr4_1:70977337-70977356 None:intergenic 40.0%
GAATTAACAGGGTCTGGATA+AGG - chr4_1:70977358-70977377 None:intergenic 40.0%
TGACAAGAATTAACAGGGTC+TGG - chr4_1:70977364-70977383 None:intergenic 40.0%
!! TTGACATGAATTTGCTGGGT+CGG - chr4_1:70977410-70977429 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+TGG - chr4_1:70977415-70977434 None:intergenic 40.0%
CCAGCAAATTCATGTCAAAC+AGG + chr4_1:70977412-70977431 Msa0569160:CDS 40.0%
CCTGTTTGACAAGAATTCAC+AGG - chr4_1:70977499-70977518 None:intergenic 40.0%
CCTGTGAATTCTTGTCAAAC+AGG + chr4_1:70977496-70977515 Msa0569160:CDS 40.0%
TTGACATGAATTTGCAGGGT+CGG - chr4_1:70977536-70977555 None:intergenic 40.0%
CTATTTGACATGAACTCGCA+AGG - chr4_1:70977582-70977601 None:intergenic 40.0%
CTTGCGAGTTCATGTCAAAT+AGG + chr4_1:70977580-70977599 Msa0569160:CDS 40.0%
TATGAATCATTTGCAGGGTC+AGG - chr4_1:70977619-70977638 None:intergenic 40.0%
TATGAATCATTTGCAGGGTC+GGG - chr4_1:70977619-70977638 None:intergenic 40.0%
TGTCAGGAAAACATTGCTGA+AGG + chr4_1:70978062-70978081 Msa0569160:intron 40.0%
AATGCAGACTTTAGCACACA+CGG + chr4_1:70978158-70978177 Msa0569160:CDS 40.0%
ATCTAGACTCTGATACGTTC+TGG + chr4_1:70978240-70978259 Msa0569160:CDS 40.0%
!! TGTCCCTTTAGAACCTTGTT+TGG + chr4_1:70978747-70978766 Msa0569160:three_prime_UTR 40.0%
GTCATCGGCAAACCCTAAAT+CGG - chr4_1:70975664-70975683 None:intergenic 45.0%
GGTTCATAAAGCAAGAACGG+TGG - chr4_1:70975729-70975748 None:intergenic 45.0%
AAGAACACCAAAGTCTGCCA+AGG - chr4_1:70975750-70975769 None:intergenic 45.0%
GTTGGAGAGAATCGAAATCC+AGG - chr4_1:70976067-70976086 None:intergenic 45.0%
GGATTTCGATTCTCTCCAAC+GGG + chr4_1:70976067-70976086 Msa0569160:CDS 45.0%
! AGAAGTATAGAAGTGGGCCA+AGG + chr4_1:70976350-70976369 Msa0569160:CDS 45.0%
! GAGCTACGGAAATTGGGTTT+TGG + chr4_1:70976380-70976399 Msa0569160:CDS 45.0%
!!! GTTTTGGAAAGCTACTGGTC+AGG + chr4_1:70976396-70976415 Msa0569160:CDS 45.0%
GATAAGGACTTGGCTGACAA+AGG + chr4_1:70976538-70976557 Msa0569160:CDS 45.0%
GGCTGACAAAGGAATTGTTC+AGG + chr4_1:70976549-70976568 Msa0569160:CDS 45.0%
GGTTAGGGTTATCCTTCGAA+GGG + chr4_1:70976663-70976682 Msa0569160:intron 45.0%
ATCCTTCGAAGGGTGAAATG+TGG + chr4_1:70976673-70976692 Msa0569160:intron 45.0%
AAAAAGAAGGTCCTGGTCCT+AGG + chr4_1:70977053-70977072 Msa0569160:CDS 45.0%
CTAGGAATGGTGCGCAATAT+GGG + chr4_1:70977071-70977090 Msa0569160:CDS 45.0%
! GACTGGAGTGATGATGAAGT+AGG + chr4_1:70977112-70977131 Msa0569160:CDS 45.0%
CAATTCTGATTGACACGGCA+TGG - chr4_1:70977248-70977267 None:intergenic 45.0%
CATGCCGTGTCAATCAGAAT+TGG + chr4_1:70977246-70977265 Msa0569160:CDS 45.0%
GGCACCAATTCTGATTGACA+CGG - chr4_1:70977253-70977272 None:intergenic 45.0%
! ATCAGAATTGGTGCCTTCTC+CGG + chr4_1:70977258-70977277 Msa0569160:CDS 45.0%
CCTGTTTGACATGGATTTGC+AGG - chr4_1:70977328-70977347 None:intergenic 45.0%
CCTGCAAATCCATGTCAAAC+AGG + chr4_1:70977325-70977344 Msa0569160:CDS 45.0%
!! TGACATGAATTTGCTGGGTC+GGG - chr4_1:70977409-70977428 None:intergenic 45.0%
GAATGTAAAGGGTCAGGAGA+AGG - chr4_1:70977445-70977464 None:intergenic 45.0%
GAATTCACAGGGTCTGGATA+AGG - chr4_1:70977487-70977506 None:intergenic 45.0%
TGACAAGAATTCACAGGGTC+TGG - chr4_1:70977493-70977512 None:intergenic 45.0%
AGGAGACAATGCAAACTGCA+GGG - chr4_1:70977953-70977972 None:intergenic 45.0%
!! TTTTGATGGCTTGGAAGACG+TGG + chr4_1:70978103-70978122 Msa0569160:CDS 45.0%
GTGTGCTAAAGTCTGCATTC+TGG - chr4_1:70978157-70978176 None:intergenic 45.0%
GCATGACGACTTCGATTTCA+TGG + chr4_1:70978208-70978227 Msa0569160:CDS 45.0%
!! TCGACTCCAACTTTCAGGTT+GGG - chr4_1:70978270-70978289 None:intergenic 45.0%
! TTCGACTCCAACTTTCAGGT+TGG - chr4_1:70978271-70978290 None:intergenic 45.0%
GTGAATAAACACGCTCTTGG+TGG + chr4_1:70978657-70978676 Msa0569160:three_prime_UTR 45.0%
AAAGCAAGAACGGTGGCGAA+CGG - chr4_1:70975722-70975741 None:intergenic 50.0%
AAACTACCTGGGAGATCCCA+AGG - chr4_1:70976187-70976206 None:intergenic 50.0%
TCCAAAACGGGGATTTGGAG+TGG + chr4_1:70976305-70976324 Msa0569160:CDS 50.0%
! ACCACTCCAAATCCCCGTTT+TGG - chr4_1:70976309-70976328 None:intergenic 50.0%
GCCAAGGATGAAACGAGCTA+CGG + chr4_1:70976366-70976385 Msa0569160:CDS 50.0%
TCCGTAGCTCGTTTCATCCT+TGG - chr4_1:70976370-70976389 None:intergenic 50.0%
CACACTGGAAAATCACCTCG+TGG + chr4_1:70976475-70976494 Msa0569160:CDS 50.0%
TCGTGGTGATCGAACCGATT+GGG + chr4_1:70976492-70976511 Msa0569160:CDS 50.0%
GGGTTAGGGTTATCCTTCGA+AGG + chr4_1:70976662-70976681 Msa0569160:intron 50.0%
CTCCACATTTCACCCTTCGA+AGG - chr4_1:70976678-70976697 None:intergenic 50.0%
CCATATTGCGCACCATTCCT+AGG - chr4_1:70977073-70977092 None:intergenic 50.0%
CCTAGGAATGGTGCGCAATA+TGG + chr4_1:70977070-70977089 Msa0569160:CDS 50.0%
!! GAATTTGTTGGGTCCGGAGA+AGG - chr4_1:70977274-70977293 None:intergenic 50.0%
TGACATGGATTTGCAGGGTC+AGG - chr4_1:70977322-70977341 None:intergenic 50.0%
ACATGAACTCGCAAGGTCAG+GGG - chr4_1:70977575-70977594 None:intergenic 50.0%
GACATGAACTCGCAAGGTCA+GGG - chr4_1:70977576-70977595 None:intergenic 50.0%
TGACATGAACTCGCAAGGTC+AGG - chr4_1:70977577-70977596 None:intergenic 50.0%
TCATTTGCAGGGTCAGGCAA+AGG - chr4_1:70977613-70977632 None:intergenic 50.0%
AGACAACGGTGTATTGCCTG+AGG + chr4_1:70977813-70977832 Msa0569160:CDS 50.0%
ACAATGCAAACTGCAGGGGA+TGG - chr4_1:70977948-70977967 None:intergenic 50.0%
GGAGACAATGCAAACTGCAG+GGG - chr4_1:70977952-70977971 None:intergenic 50.0%
GAGGAGACAATGCAAACTGC+AGG - chr4_1:70977954-70977973 None:intergenic 50.0%
! CTTGGAAGACGTGGATTGCT+CGG + chr4_1:70978112-70978131 Msa0569160:CDS 50.0%
! GTGGATTGCTCGGCTGAATT+GGG + chr4_1:70978122-70978141 Msa0569160:CDS 50.0%
AGACTTTAGCACACACGGAC+TGG + chr4_1:70978163-70978182 Msa0569160:CDS 50.0%
GCTTCTACGGGCAATGTTGT+GGG + chr4_1:70978185-70978204 Msa0569160:CDS 50.0%
CTTCTACGGGCAATGTTGTG+GGG + chr4_1:70978186-70978205 Msa0569160:CDS 50.0%
! GAGCACTATTGCTGTTGTGC+TGG + chr4_1:70978331-70978350 Msa0569160:three_prime_UTR 50.0%
!! CTATTGCTGTTGTGCTGGCT+AGG + chr4_1:70978336-70978355 Msa0569160:three_prime_UTR 50.0%
!!! GATTCGGTCGTTGGCTCTTT+TGG + chr4_1:70978363-70978382 Msa0569160:three_prime_UTR 50.0%
!! TATACCCACTTGGGTTGACC+TGG + chr4_1:70978463-70978482 Msa0569160:intron 50.0%
!! TTGGGTTGACCTGGTGGTAT+TGG + chr4_1:70978472-70978491 Msa0569160:intron 50.0%
!! TTGACCTGGTGGTATTGGCT+TGG + chr4_1:70978477-70978496 Msa0569160:intron 50.0%
!! TGACCTGGTGGTATTGGCTT+GGG + chr4_1:70978478-70978497 Msa0569160:intron 50.0%
!! GTGGTATTGGCTTGGGTCTT+GGG + chr4_1:70978485-70978504 Msa0569160:intron 50.0%
GAATCGAACCTGAGACCTTG+CGG - chr4_1:70978522-70978541 None:intergenic 50.0%
AGGTCTCAGGTTCGATTCTC+CGG + chr4_1:70978524-70978543 Msa0569160:intron 50.0%
! CGATTCTCCGGTGCCAATTT+AGG + chr4_1:70978536-70978555 Msa0569160:intron 50.0%
! TTCTCCGGTGCCAATTTAGG+TGG + chr4_1:70978539-70978558 Msa0569160:intron 50.0%
! TCTCCGGTGCCAATTTAGGT+GGG + chr4_1:70978540-70978559 Msa0569160:intron 50.0%
TAGCCCACCTAAATTGGCAC+CGG - chr4_1:70978546-70978565 None:intergenic 50.0%
!! CAATCGGTTCGATCACCACG+AGG - chr4_1:70976493-70976512 None:intergenic 55.0%
CTCGTGGTGATCGAACCGAT+TGG + chr4_1:70976491-70976510 Msa0569160:CDS 55.0%
GAAGGTCCTGGTCCTAGGAA+TGG + chr4_1:70977058-70977077 Msa0569160:CDS 55.0%
! AGTGCAGCCGATTCCGCAAA+AGG - chr4_1:70977142-70977161 None:intergenic 55.0%
GGATTTGCAGGGTCAGGAGA+AGG - chr4_1:70977316-70977335 None:intergenic 55.0%
!! GAATTTGCTGGGTCGGGAGA+CGG - chr4_1:70977403-70977422 None:intergenic 55.0%
GAATTTGCAGGGTCGGAAGC+AGG - chr4_1:70977529-70977548 None:intergenic 55.0%
! CGTGGATTGCTCGGCTGAAT+TGG + chr4_1:70978121-70978140 Msa0569160:CDS 55.0%
TCGGCTGAATTGGGATCTGC+TGG + chr4_1:70978131-70978150 Msa0569160:CDS 55.0%
!! CACACACGGACTGGCTTCTA+CGG + chr4_1:70978172-70978191 Msa0569160:CDS 55.0%
!! ACACACGGACTGGCTTCTAC+GGG + chr4_1:70978173-70978192 Msa0569160:CDS 55.0%
GGCTTCTACGGGCAATGTTG+TGG + chr4_1:70978184-70978203 Msa0569160:CDS 55.0%
GGCAGACCCAACCTGAAAGT+TGG + chr4_1:70978261-70978280 Msa0569160:CDS 55.0%
!! TTGCTGTTGTGCTGGCTAGG+AGG + chr4_1:70978339-70978358 Msa0569160:three_prime_UTR 55.0%
!! GTGCTGGCTAGGAGGTGATT+CGG + chr4_1:70978347-70978366 Msa0569160:three_prime_UTR 55.0%
!! CTAGGAGGTGATTCGGTCGT+TGG + chr4_1:70978354-70978373 Msa0569160:three_prime_UTR 55.0%
ACCACCAGGTCAACCCAAGT+GGG - chr4_1:70978470-70978489 None:intergenic 55.0%
TACCACCAGGTCAACCCAAG+TGG - chr4_1:70978471-70978490 None:intergenic 55.0%
AGACCCAAGCCAATACCACC+AGG - chr4_1:70978484-70978503 None:intergenic 55.0%
!! GGTGGTATTGGCTTGGGTCT+TGG + chr4_1:70978484-70978503 Msa0569160:intron 55.0%
TACGCTCCTTGGGATCTCCC+AGG + chr4_1:70976178-70976197 Msa0569160:CDS 60.0%
TGCGCACCATTCCTAGGACC+AGG - chr4_1:70977067-70977086 None:intergenic 60.0%
GAACTCGCAAGGTCAGGGGA+CGG - chr4_1:70977571-70977590 None:intergenic 60.0%
!! ACCCACTTGGGTTGACCTGG+TGG + chr4_1:70978466-70978485 Msa0569160:intron 60.0%
TCGAACCTGAGACCTTGCGG+AGG - chr4_1:70978519-70978538 None:intergenic 60.0%
TCATTTGCAGGGTCGGGCGC+AGG - chr4_1:70977724-70977743 None:intergenic 65.0%
! TGGGAGTGTGCTCCTCCGCA+AGG + chr4_1:70978504-70978523 Msa0569160:intron 65.0%
GTGCTCCTCCGCAAGGTCTC+AGG + chr4_1:70978511-70978530 Msa0569160:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 70975591 70978771 70975591 ID=Msa0569160;Name=Msa0569160
chr4_1 mRNA 70975591 70978771 70975591 ID=Msa0569160-mRNA-1;Parent=Msa0569160;Name=Msa0569160-mRNA-1;_AED=0.07;_eAED=0.07;_QI=452|1|1|1|0.75|0.6|5|334|491
chr4_1 exon 70975591 70976199 70975591 ID=Msa0569160-mRNA-1:exon:23915;Parent=Msa0569160-mRNA-1
chr4_1 exon 70976293 70976570 70976293 ID=Msa0569160-mRNA-1:exon:23916;Parent=Msa0569160-mRNA-1
chr4_1 exon 70977025 70977834 70977025 ID=Msa0569160-mRNA-1:exon:23917;Parent=Msa0569160-mRNA-1
chr4_1 exon 70978068 70978446 70978068 ID=Msa0569160-mRNA-1:exon:23918;Parent=Msa0569160-mRNA-1
chr4_1 exon 70978586 70978771 70978586 ID=Msa0569160-mRNA-1:exon:23919;Parent=Msa0569160-mRNA-1
chr4_1 five_prime_UTR 70975591 70976042 70975591 ID=Msa0569160-mRNA-1:five_prime_utr;Parent=Msa0569160-mRNA-1
chr4_1 CDS 70976043 70976199 70976043 ID=Msa0569160-mRNA-1:cds;Parent=Msa0569160-mRNA-1
chr4_1 CDS 70976293 70976570 70976293 ID=Msa0569160-mRNA-1:cds;Parent=Msa0569160-mRNA-1
chr4_1 CDS 70977025 70977834 70977025 ID=Msa0569160-mRNA-1:cds;Parent=Msa0569160-mRNA-1
chr4_1 CDS 70978068 70978298 70978068 ID=Msa0569160-mRNA-1:cds;Parent=Msa0569160-mRNA-1
chr4_1 three_prime_UTR 70978299 70978446 70978299 ID=Msa0569160-mRNA-1:three_prime_utr;Parent=Msa0569160-mRNA-1
chr4_1 three_prime_UTR 70978586 70978771 70978586 ID=Msa0569160-mRNA-1:three_prime_utr;Parent=Msa0569160-mRNA-1
Gene Sequence

>Msa0569160

ATGGCTATACCTAAATTGGTACCTGGATTTCGATTCTCTCCAACGGGAGTTGAATTGATTAAATACTTTCTTAAGAGGAAAGTGTTGGGAAAAAAGTTTCATAACGATGTCATTGCTGAACTTGATATATACAAATACGCTCCTTGGGATCTCCCAGAATTATCTTATCTCCAAAACGGGGATTTGGAGTGGTACTTTTTCTGTCCTATTGAGAAGAAGTATAGAAGTGGGCCAAGGATGAAACGAGCTACGGAAATTGGGTTTTGGAAAGCTACTGGTCAGGATCGAGCTGTTCAACAGAATAATCAAACGGTGGGGATGATTAAAACCCTAATATTTCACACTGGAAAATCACCTCGTGGTGATCGAACCGATTGGGTTATGCATGAGTATAGGCTTGAAGATAAGGACTTGGCTGACAAAGGAATTGTTCAGGATTCCTACGTAATCTGTAAGGTATTTCAAAAAGAAGGTCCTGGTCCTAGGAATGGTGCGCAATATGGGAGACCATTTAATGAGGAAGACTGGAGTGATGATGAAGTAGGAATACCTTTTGCGGAATCGGCTGCACTAGTTGCCAGTTTGCCTGTGACATCTAATTGTTCTGTTCTAAATGATCAGAATTTTCAAACTAGTGGATATATTGGTTCAATATCCATGCCGTGTCAATCAGAATTGGTGCCTTCTCCGGACCCAACAAATTCATGTCAAACAGGATTGACACCTTCTCCTGACCCTGCAAATCCATGTCAAACAGGATTTATGCCTTATCCAGACCCTGTTAATTCTTGTCAAACAGGAGGATTTATGCCGTCTCCCGACCCAGCAAATTCATGTCAAACAGGATTGACACCTTCTCCTGACCCTTTACATTCTTTTCAAACAGGATTTATGCCTTATCCAGACCCTGTGAATTCTTGTCAAACAGGATTTATGCCTGCTTCCGACCCTGCAAATTCATGTCAAACAGAATTTATGCCGTCCCCTGACCTTGCGAGTTCATGTCAAATAGGATTGATGCCTTTGCCTGACCCTGCAAATGATTCATATCCAGACAATCAAGCTGTTAATAACGATGATGATGATGATATTCTAGCAATGCTTGATATTTTCAAAGACAACGGCGTATTGCCTGCGCCCGACCCTGCAAATGATTCATATCCAAACAATCAAACTGTTAATAATGATGATGATGATATTCTAGCAATGCTTGATATTTTTGAAGACAACGGTGTATTGCCTGAGGAAAACATTGCTGAAGGTGCACTCTTAACTGACTTTTTTGATGGCTTGGAAGACGTGGATTGCTCGGCTGAATTGGGATCTGCTGGCCAGAATGCAGACTTTAGCACACACGGACTGGCTTCTACGGGCAATGTTGTGGGGCATGACGACTTCGATTTCATGGAGTTGATTGATCTAGACTCTGATACGTTCTGGCAGACCCAACCTGAAAGTTGGAGTCGAAATAAATAA
Protein sequence

>Msa0569160

MAIPKLVPGFRFSPTGVELIKYFLKRKVLGKKFHNDVIAELDIYKYAPWDLPELSYLQNGDLEWYFFCPIEKKYRSGPRMKRATEIGFWKATGQDRAVQQNNQTVGMIKTLIFHTGKSPRGDRTDWVMHEYRLEDKDLADKGIVQDSYVICKVFQKEGPGPRNGAQYGRPFNEEDWSDDEVGIPFAESAALVASLPVTSNCSVLNDQNFQTSGYIGSISMPCQSELVPSPDPTNSCQTGLTPSPDPANPCQTGFMPYPDPVNSCQTGGFMPSPDPANSCQTGLTPSPDPLHSFQTGFMPYPDPVNSCQTGFMPASDPANSCQTEFMPSPDLASSCQIGLMPLPDPANDSYPDNQAVNNDDDDDILAMLDIFKDNGVLPAPDPANDSYPNNQTVNNDDDDILAMLDIFEDNGVLPEENIAEGALLTDFFDGLEDVDCSAELGSAGQNADFSTHGLASTGNVVGHDDFDFMELIDLDSDTFWQTQPESWSRNK*