Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569940 | XP_003630424.1 | 89.241 | 316 | 30 | 2 | 1 | 316 | 1 | 312 | 7.21e-169 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569940 | sp|P81393|MYB08_ANTMA | 65.363 | 179 | 56 | 1 | 1 | 173 | 1 | 179 | 2.67e-81 | 249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569940 | G7LGH2 | 89.241 | 316 | 30 | 2 | 1 | 316 | 1 | 312 | 3.44e-169 | 481 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0569940 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569940 | MtrunA17_Chr8g0385321 | 89.241 | 316 | 30 | 2 | 1 | 316 | 1 | 312 | 6.63e-173 | 481 |
| Msa0569940 | MtrunA17_Chr3g0131121 | 49.026 | 308 | 98 | 7 | 1 | 282 | 1 | 275 | 3.23e-89 | 268 |
| Msa0569940 | MtrunA17_Chr4g0037141 | 47.022 | 319 | 124 | 9 | 1 | 312 | 1 | 281 | 2.55e-86 | 261 |
| Msa0569940 | MtrunA17_Chr5g0435101 | 61.644 | 146 | 51 | 1 | 3 | 148 | 2 | 142 | 5.63e-66 | 206 |
| Msa0569940 | MtrunA17_Chr7g0270891 | 57.862 | 159 | 67 | 0 | 1 | 159 | 1 | 159 | 8.55e-65 | 208 |
| Msa0569940 | MtrunA17_Chr4g0058631 | 42.629 | 251 | 118 | 3 | 1 | 225 | 1 | 251 | 2.15e-64 | 207 |
| Msa0569940 | MtrunA17_Chr1g0193371 | 68.217 | 129 | 41 | 0 | 1 | 129 | 1 | 129 | 5.66e-64 | 206 |
| Msa0569940 | MtrunA17_Chr1g0193801 | 52.247 | 178 | 78 | 1 | 1 | 178 | 1 | 171 | 1.14e-63 | 206 |
| Msa0569940 | MtrunA17_Chr4g0048511 | 66.667 | 129 | 42 | 1 | 1 | 128 | 1 | 129 | 2.15e-63 | 204 |
| Msa0569940 | MtrunA17_Chr2g0281071 | 67.442 | 129 | 41 | 1 | 1 | 128 | 1 | 129 | 3.67e-63 | 203 |
| Msa0569940 | MtrunA17_Chr3g0115821 | 63.636 | 132 | 48 | 0 | 1 | 132 | 1 | 132 | 5.68e-63 | 203 |
| Msa0569940 | MtrunA17_Chr2g0323411 | 67.969 | 128 | 41 | 0 | 1 | 128 | 1 | 128 | 6.99e-63 | 202 |
| Msa0569940 | MtrunA17_Chr4g0039971 | 66.406 | 128 | 43 | 0 | 1 | 128 | 2 | 129 | 9.60e-63 | 202 |
| Msa0569940 | MtrunA17_Chr7g0217741 | 65.625 | 128 | 44 | 0 | 1 | 128 | 1 | 128 | 2.47e-62 | 200 |
| Msa0569940 | MtrunA17_Chr4g0042671 | 49.746 | 197 | 96 | 1 | 1 | 197 | 1 | 194 | 2.59e-62 | 203 |
| Msa0569940 | MtrunA17_Chr4g0057031 | 65.891 | 129 | 44 | 0 | 1 | 129 | 1 | 129 | 5.76e-62 | 198 |
| Msa0569940 | MtrunA17_Chr5g0410961 | 66.406 | 128 | 43 | 0 | 1 | 128 | 1 | 128 | 1.09e-61 | 199 |
| Msa0569940 | MtrunA17_Chr3g0117091 | 65.891 | 129 | 44 | 0 | 1 | 129 | 1 | 129 | 1.84e-61 | 199 |
| Msa0569940 | MtrunA17_Chr8g0349261 | 57.233 | 159 | 66 | 2 | 1 | 157 | 1 | 159 | 2.58e-61 | 197 |
| Msa0569940 | MtrunA17_Chr5g0434571 | 62.590 | 139 | 51 | 1 | 1 | 139 | 37 | 174 | 6.91e-61 | 198 |
| Msa0569940 | MtrunA17_Chr1g0211161 | 55.414 | 157 | 59 | 1 | 3 | 159 | 4 | 149 | 8.03e-61 | 194 |
| Msa0569940 | MtrunA17_Chr3g0110351 | 61.268 | 142 | 52 | 1 | 1 | 142 | 1 | 139 | 4.52e-60 | 194 |
| Msa0569940 | MtrunA17_Chr6g0453471 | 55.346 | 159 | 69 | 1 | 1 | 157 | 1 | 159 | 5.62e-60 | 196 |
| Msa0569940 | MtrunA17_Chr7g0271241 | 68.217 | 129 | 41 | 0 | 1 | 129 | 1 | 129 | 9.33e-60 | 196 |
| Msa0569940 | MtrunA17_Chr4g0044421 | 64.000 | 125 | 44 | 1 | 3 | 126 | 2 | 126 | 2.73e-59 | 188 |
| Msa0569940 | MtrunA17_Chr7g0228891 | 44.776 | 201 | 103 | 2 | 1 | 199 | 1 | 195 | 8.80e-59 | 190 |
| Msa0569940 | MtrunA17_Chr3g0121241 | 48.947 | 190 | 88 | 2 | 5 | 185 | 35 | 224 | 1.25e-58 | 190 |
| Msa0569940 | MtrunA17_Chr1g0187761 | 58.278 | 151 | 59 | 1 | 1 | 151 | 1 | 147 | 2.49e-58 | 188 |
| Msa0569940 | MtrunA17_Chr1g0203411 | 67.241 | 116 | 38 | 0 | 1 | 116 | 1 | 116 | 6.84e-58 | 188 |
| Msa0569940 | MtrunA17_Chr8g0342541 | 52.469 | 162 | 73 | 1 | 1 | 162 | 1 | 158 | 1.28e-57 | 189 |
| Msa0569940 | MtrunA17_Chr2g0330041 | 59.859 | 142 | 54 | 1 | 1 | 142 | 1 | 139 | 3.33e-57 | 189 |
| Msa0569940 | MtrunA17_Chr8g0342521 | 53.704 | 162 | 67 | 2 | 1 | 162 | 1 | 154 | 5.84e-57 | 187 |
| Msa0569940 | MtrunA17_Chr5g0395281 | 60.938 | 128 | 50 | 0 | 1 | 128 | 1 | 128 | 1.01e-56 | 186 |
| Msa0569940 | MtrunA17_Chr4g0068061 | 68.376 | 117 | 37 | 0 | 1 | 117 | 1 | 117 | 1.36e-56 | 186 |
| Msa0569940 | MtrunA17_Chr7g0275911 | 51.786 | 168 | 80 | 1 | 1 | 167 | 1 | 168 | 1.97e-56 | 183 |
| Msa0569940 | MtrunA17_Chr3g0103281 | 54.902 | 153 | 68 | 1 | 1 | 153 | 1 | 152 | 2.40e-56 | 185 |
| Msa0569940 | MtrunA17_Chr1g0167691 | 55.333 | 150 | 67 | 0 | 1 | 150 | 1 | 150 | 2.94e-56 | 182 |
| Msa0569940 | MtrunA17_Chr2g0309911 | 62.903 | 124 | 46 | 0 | 6 | 129 | 5 | 128 | 9.12e-56 | 183 |
| Msa0569940 | MtrunA17_Chr4g0070611 | 66.379 | 116 | 39 | 0 | 1 | 116 | 1 | 116 | 1.09e-55 | 183 |
| Msa0569940 | MtrunA17_Chr6g0452271 | 52.980 | 151 | 68 | 1 | 1 | 151 | 1 | 148 | 1.39e-55 | 183 |
| Msa0569940 | MtrunA17_Chr4g0070641 | 66.379 | 116 | 39 | 0 | 1 | 116 | 1 | 116 | 2.00e-55 | 177 |
| Msa0569940 | MtrunA17_Chr8g0346561 | 66.379 | 116 | 39 | 0 | 1 | 116 | 1 | 116 | 2.63e-55 | 182 |
| Msa0569940 | MtrunA17_Chr7g0274581 | 55.862 | 145 | 63 | 1 | 1 | 145 | 1 | 144 | 3.60e-54 | 176 |
| Msa0569940 | MtrunA17_Chr1g0167661 | 53.247 | 154 | 71 | 1 | 1 | 154 | 1 | 153 | 3.66e-54 | 177 |
| Msa0569940 | MtrunA17_Chr7g0261281 | 65.517 | 116 | 40 | 0 | 1 | 116 | 1 | 116 | 1.16e-53 | 177 |
| Msa0569940 | MtrunA17_Chr8g0387421 | 64.655 | 116 | 41 | 0 | 1 | 116 | 1 | 116 | 1.52e-53 | 177 |
| Msa0569940 | MtrunA17_Chr8g0342481 | 51.534 | 163 | 73 | 2 | 1 | 162 | 1 | 158 | 3.97e-53 | 179 |
| Msa0569940 | MtrunA17_Chr1g0194951 | 62.500 | 128 | 48 | 0 | 1 | 128 | 1 | 128 | 4.84e-53 | 178 |
| Msa0569940 | MtrunA17_Chr7g0269831 | 64.662 | 133 | 46 | 1 | 1 | 132 | 1 | 133 | 1.55e-52 | 176 |
| Msa0569940 | MtrunA17_Chr5g0397231 | 66.364 | 110 | 37 | 0 | 1 | 110 | 1 | 110 | 7.42e-52 | 174 |
| Msa0569940 | MtrunA17_Chr4g0022881 | 64.035 | 114 | 41 | 0 | 1 | 114 | 1 | 114 | 1.84e-51 | 169 |
| Msa0569940 | MtrunA17_Chr2g0311221 | 67.273 | 110 | 36 | 0 | 2 | 111 | 4 | 113 | 1.62e-50 | 170 |
| Msa0569940 | MtrunA17_Chr4g0060721 | 62.069 | 116 | 44 | 0 | 1 | 116 | 2 | 117 | 2.37e-50 | 170 |
| Msa0569940 | MtrunA17_Chr2g0323351 | 62.069 | 116 | 44 | 0 | 1 | 116 | 1 | 116 | 4.34e-50 | 167 |
| Msa0569940 | MtrunA17_Chr3g0135311 | 39.744 | 234 | 130 | 3 | 1 | 226 | 1 | 231 | 4.37e-50 | 169 |
| Msa0569940 | MtrunA17_Chr4g0022891 | 55.882 | 136 | 56 | 1 | 1 | 132 | 1 | 136 | 5.77e-50 | 166 |
| Msa0569940 | MtrunA17_Chr4g0022931 | 60.684 | 117 | 45 | 1 | 1 | 116 | 1 | 117 | 5.84e-50 | 167 |
| Msa0569940 | MtrunA17_Chr7g0217221 | 59.483 | 116 | 47 | 0 | 1 | 116 | 1 | 116 | 6.53e-50 | 167 |
| Msa0569940 | MtrunA17_Chr2g0328771 | 66.990 | 103 | 34 | 0 | 14 | 116 | 22 | 124 | 6.75e-50 | 168 |
| Msa0569940 | MtrunA17_Chr1g0151941 | 57.983 | 119 | 49 | 1 | 1 | 118 | 1 | 119 | 7.61e-50 | 166 |
| Msa0569940 | MtrunA17_Chr5g0417821 | 64.348 | 115 | 41 | 0 | 14 | 128 | 9 | 123 | 8.72e-50 | 167 |
| Msa0569940 | MtrunA17_Chr7g0254411 | 58.730 | 126 | 50 | 1 | 1 | 124 | 1 | 126 | 1.27e-49 | 168 |
| Msa0569940 | MtrunA17_Chr5g0400821 | 44.286 | 210 | 97 | 5 | 1 | 197 | 1 | 203 | 1.81e-49 | 167 |
| Msa0569940 | MtrunA17_Chr4g0032401 | 66.990 | 103 | 34 | 0 | 14 | 116 | 19 | 121 | 4.00e-49 | 167 |
| Msa0569940 | MtrunA17_Chr4g0022901 | 55.882 | 136 | 54 | 3 | 1 | 134 | 1 | 132 | 5.53e-49 | 164 |
| Msa0569940 | MtrunA17_Chr4g0028311 | 57.252 | 131 | 54 | 2 | 1 | 130 | 1 | 130 | 5.93e-49 | 166 |
| Msa0569940 | MtrunA17_Chr1g0152011 | 48.750 | 160 | 81 | 1 | 1 | 159 | 1 | 160 | 1.73e-48 | 165 |
| Msa0569940 | MtrunA17_Chr4g0022911 | 59.483 | 116 | 46 | 1 | 1 | 115 | 1 | 116 | 2.52e-48 | 163 |
| Msa0569940 | MtrunA17_Chr1g0203441 | 56.489 | 131 | 55 | 2 | 1 | 130 | 1 | 130 | 2.78e-48 | 162 |
| Msa0569940 | MtrunA17_Chr7g0264641 | 58.824 | 119 | 48 | 1 | 1 | 118 | 1 | 119 | 7.28e-48 | 161 |
| Msa0569940 | MtrunA17_Chr3g0092401 | 59.483 | 116 | 47 | 0 | 1 | 116 | 2 | 117 | 1.07e-47 | 162 |
| Msa0569940 | MtrunA17_Chr3g0088461 | 62.963 | 108 | 40 | 0 | 9 | 116 | 19 | 126 | 2.53e-47 | 162 |
| Msa0569940 | MtrunA17_Chr6g0470971 | 44.809 | 183 | 87 | 3 | 7 | 186 | 9 | 180 | 7.44e-47 | 159 |
| Msa0569940 | MtrunA17_Chr2g0327351 | 62.162 | 111 | 41 | 1 | 1 | 110 | 1 | 111 | 2.33e-46 | 159 |
| Msa0569940 | MtrunA17_Chr7g0228231 | 61.017 | 118 | 44 | 1 | 1 | 116 | 1 | 118 | 1.01e-45 | 154 |
| Msa0569940 | MtrunA17_Chr6g0450101 | 61.017 | 118 | 44 | 1 | 1 | 116 | 1 | 118 | 1.41e-45 | 154 |
| Msa0569940 | MtrunA17_Chr6g0453211 | 57.658 | 111 | 47 | 0 | 1 | 111 | 1 | 111 | 4.76e-45 | 155 |
| Msa0569940 | MtrunA17_Chr4g0054391 | 61.818 | 110 | 41 | 1 | 1 | 109 | 1 | 110 | 6.08e-45 | 154 |
| Msa0569940 | MtrunA17_Chr6g0487491 | 47.742 | 155 | 70 | 4 | 1 | 146 | 1 | 153 | 3.53e-44 | 152 |
| Msa0569940 | MtrunA17_Chr4g0072751 | 61.261 | 111 | 42 | 1 | 1 | 110 | 1 | 111 | 9.64e-44 | 153 |
| Msa0569940 | MtrunA17_Chr1g0186061 | 61.111 | 108 | 42 | 0 | 8 | 115 | 16 | 123 | 1.09e-43 | 150 |
| Msa0569940 | MtrunA17_Chr4g0055981 | 44.304 | 158 | 88 | 0 | 9 | 166 | 52 | 209 | 1.58e-43 | 149 |
| Msa0569940 | MtrunA17_Chr8g0343831 | 56.897 | 116 | 46 | 1 | 1 | 116 | 1 | 112 | 1.97e-43 | 149 |
| Msa0569940 | MtrunA17_Chr7g0247131 | 67.778 | 90 | 29 | 0 | 44 | 133 | 10 | 99 | 2.35e-43 | 150 |
| Msa0569940 | MtrunA17_Chr1g0168661 | 59.091 | 110 | 45 | 0 | 6 | 115 | 15 | 124 | 4.03e-43 | 149 |
| Msa0569940 | MtrunA17_Chr8g0354661 | 63.725 | 102 | 37 | 0 | 14 | 115 | 39 | 140 | 5.58e-43 | 155 |
| Msa0569940 | MtrunA17_Chr1g0209661 | 56.522 | 115 | 50 | 0 | 8 | 122 | 23 | 137 | 6.66e-43 | 150 |
| Msa0569940 | MtrunA17_Chr3g0099131 | 62.745 | 102 | 38 | 0 | 14 | 115 | 43 | 144 | 1.53e-42 | 154 |
| Msa0569940 | MtrunA17_Chr7g0240821 | 47.059 | 153 | 78 | 2 | 16 | 165 | 5 | 157 | 2.98e-42 | 145 |
| Msa0569940 | MtrunA17_Chr1g0180391 | 61.165 | 103 | 40 | 0 | 14 | 116 | 21 | 123 | 1.43e-41 | 144 |
| Msa0569940 | MtrunA17_Chr1g0194301 | 52.101 | 119 | 57 | 0 | 14 | 132 | 35 | 153 | 1.22e-40 | 143 |
| Msa0569940 | MtrunA17_Chr1g0194291 | 61.765 | 102 | 39 | 0 | 14 | 115 | 23 | 124 | 1.86e-40 | 142 |
| Msa0569940 | MtrunA17_Chr3g0080861 | 57.843 | 102 | 43 | 0 | 14 | 115 | 39 | 140 | 5.17e-40 | 146 |
| Msa0569940 | MtrunA17_Chr5g0434931 | 42.308 | 156 | 85 | 1 | 14 | 169 | 37 | 187 | 6.20e-39 | 139 |
| Msa0569940 | MtrunA17_Chr8g0342511 | 65.517 | 87 | 30 | 0 | 1 | 87 | 1 | 87 | 7.00e-39 | 132 |
| Msa0569940 | MtrunA17_Chr7g0220341 | 42.331 | 163 | 87 | 3 | 14 | 174 | 27 | 184 | 7.48e-39 | 138 |
| Msa0569940 | MtrunA17_Chr1g0154031 | 59.804 | 102 | 41 | 0 | 14 | 115 | 78 | 179 | 1.10e-38 | 141 |
| Msa0569940 | MtrunA17_Chr4g0042611 | 63.636 | 88 | 32 | 0 | 1 | 88 | 1 | 88 | 1.24e-38 | 132 |
| Msa0569940 | MtrunA17_Chr5g0434911 | 50.442 | 113 | 56 | 0 | 7 | 119 | 16 | 128 | 1.33e-38 | 137 |
| Msa0569940 | MtrunA17_Chr2g0294811 | 64.773 | 88 | 31 | 0 | 1 | 88 | 1 | 88 | 2.22e-38 | 132 |
| Msa0569940 | MtrunA17_Chr1g0192411 | 51.667 | 120 | 52 | 1 | 14 | 127 | 14 | 133 | 3.13e-38 | 140 |
| Msa0569940 | MtrunA17_Chr5g0434831 | 53.774 | 106 | 49 | 0 | 14 | 119 | 9 | 114 | 3.65e-38 | 134 |
| Msa0569940 | MtrunA17_Chr2g0327821 | 42.953 | 149 | 79 | 2 | 9 | 154 | 3 | 148 | 6.08e-38 | 135 |
| Msa0569940 | MtrunA17_Chr2g0293911 | 62.376 | 101 | 38 | 0 | 14 | 114 | 26 | 126 | 4.48e-37 | 135 |
| Msa0569940 | MtrunA17_Chr8g0342531 | 61.798 | 89 | 34 | 0 | 1 | 89 | 1 | 89 | 5.67e-37 | 130 |
| Msa0569940 | MtrunA17_Chr4g0068921 | 61.386 | 101 | 39 | 0 | 14 | 114 | 26 | 126 | 9.66e-37 | 130 |
| Msa0569940 | MtrunA17_Chr8g0342461 | 61.111 | 90 | 34 | 1 | 1 | 89 | 1 | 90 | 1.01e-36 | 128 |
| Msa0569940 | MtrunA17_Chr8g0342471 | 61.111 | 90 | 34 | 1 | 1 | 89 | 1 | 90 | 2.02e-36 | 127 |
| Msa0569940 | MtrunA17_Chr7g0228991 | 53.774 | 106 | 49 | 0 | 14 | 119 | 31 | 136 | 2.40e-36 | 132 |
| Msa0569940 | MtrunA17_Chr4g0030881 | 51.351 | 111 | 47 | 1 | 12 | 115 | 7 | 117 | 7.06e-36 | 130 |
| Msa0569940 | MtrunA17_Chr2g0322521 | 58.824 | 102 | 42 | 0 | 14 | 115 | 31 | 132 | 1.12e-35 | 132 |
| Msa0569940 | MtrunA17_Chr5g0434841 | 52.830 | 106 | 50 | 0 | 14 | 119 | 22 | 127 | 3.56e-35 | 129 |
| Msa0569940 | MtrunA17_Chr5g0440781 | 52.212 | 113 | 52 | 2 | 12 | 123 | 12 | 123 | 3.88e-35 | 126 |
| Msa0569940 | MtrunA17_Chr5g0440761 | 52.212 | 113 | 52 | 2 | 12 | 123 | 12 | 123 | 8.63e-35 | 127 |
| Msa0569940 | MtrunA17_Chr5g0441141 | 52.212 | 113 | 52 | 2 | 12 | 123 | 12 | 123 | 1.25e-34 | 127 |
| Msa0569940 | MtrunA17_Chr8g0360111 | 54.545 | 99 | 45 | 0 | 14 | 112 | 27 | 125 | 1.37e-34 | 127 |
| Msa0569940 | MtrunA17_Chr8g0334881 | 50.000 | 108 | 53 | 1 | 8 | 114 | 6 | 113 | 1.46e-32 | 122 |
| Msa0569940 | MtrunA17_Chr2g0323321 | 56.522 | 92 | 39 | 1 | 1 | 92 | 1 | 91 | 1.64e-32 | 117 |
| Msa0569940 | MtrunA17_Chr5g0395221 | 57.955 | 88 | 37 | 0 | 1 | 88 | 1 | 88 | 3.45e-32 | 115 |
| Msa0569940 | MtrunA17_Chr5g0401731 | 44.872 | 156 | 84 | 2 | 14 | 169 | 15 | 168 | 1.57e-31 | 120 |
| Msa0569940 | MtrunA17_Chr4g0008551 | 40.437 | 183 | 97 | 4 | 14 | 195 | 38 | 209 | 3.34e-31 | 120 |
| Msa0569940 | MtrunA17_Chr5g0441131 | 50.442 | 113 | 54 | 2 | 12 | 123 | 9 | 120 | 6.35e-31 | 115 |
| Msa0569940 | MtrunA17_Chr4g0013361 | 45.528 | 123 | 64 | 2 | 8 | 127 | 6 | 128 | 2.89e-30 | 116 |
| Msa0569940 | MtrunA17_Chr5g0429661 | 47.170 | 106 | 54 | 2 | 14 | 119 | 122 | 225 | 2.32e-29 | 115 |
| Msa0569940 | MtrunA17_Chr3g0099141 | 56.250 | 80 | 35 | 0 | 14 | 93 | 42 | 121 | 4.65e-29 | 108 |
| Msa0569940 | MtrunA17_Chr3g0093811 | 53.933 | 89 | 41 | 0 | 44 | 132 | 14 | 102 | 1.06e-28 | 111 |
| Msa0569940 | MtrunA17_Chr4g0053431 | 45.070 | 142 | 68 | 3 | 14 | 149 | 5 | 142 | 2.08e-28 | 110 |
| Msa0569940 | MtrunA17_Chr6g0454921 | 37.624 | 202 | 112 | 6 | 14 | 213 | 15 | 204 | 4.72e-28 | 108 |
| Msa0569940 | MtrunA17_Chr7g0229101 | 60.000 | 70 | 28 | 0 | 44 | 113 | 4 | 73 | 8.08e-27 | 104 |
| Msa0569940 | MtrunA17_Chr4g0058991 | 48.598 | 107 | 51 | 3 | 14 | 119 | 209 | 312 | 2.17e-26 | 108 |
| Msa0569940 | MtrunA17_Chr3g0133601 | 50.000 | 102 | 50 | 1 | 14 | 115 | 37 | 137 | 2.34e-26 | 103 |
| Msa0569940 | MtrunA17_Chr3g0117511 | 32.979 | 188 | 100 | 5 | 3 | 167 | 170 | 354 | 6.11e-26 | 107 |
| Msa0569940 | MtrunA17_Chr7g0238631 | 44.860 | 107 | 50 | 2 | 14 | 116 | 113 | 214 | 8.09e-26 | 107 |
| Msa0569940 | MtrunA17_Chr5g0437321 | 49.495 | 99 | 49 | 1 | 14 | 112 | 19 | 116 | 3.02e-25 | 102 |
| Msa0569940 | MtrunA17_Chr7g0229131 | 52.778 | 72 | 34 | 0 | 45 | 116 | 5 | 76 | 6.76e-25 | 98.6 |
| Msa0569940 | MtrunA17_Chr3g0139671 | 42.857 | 105 | 59 | 1 | 14 | 118 | 85 | 188 | 1.82e-24 | 103 |
| Msa0569940 | MtrunA17_Chr7g0228531 | 44.643 | 112 | 56 | 3 | 8 | 115 | 210 | 319 | 2.23e-24 | 102 |
| Msa0569940 | MtrunA17_Chr5g0434901 | 57.353 | 68 | 29 | 0 | 46 | 113 | 7 | 74 | 2.38e-24 | 95.5 |
| Msa0569940 | MtrunA17_Chr1g0157731 | 43.810 | 105 | 58 | 1 | 14 | 118 | 91 | 194 | 3.94e-24 | 103 |
| Msa0569940 | MtrunA17_Chr6g0480581 | 40.650 | 123 | 62 | 4 | 14 | 129 | 4 | 122 | 7.81e-24 | 97.8 |
| Msa0569940 | MtrunA17_Chr5g0425591 | 49.412 | 85 | 42 | 1 | 12 | 95 | 9 | 93 | 1.87e-23 | 92.4 |
| Msa0569940 | MtrunA17_Chr7g0228401 | 33.333 | 204 | 119 | 6 | 25 | 228 | 290 | 476 | 5.59e-23 | 99.0 |
| Msa0569940 | MtrunA17_Chr5g0397841 | 45.833 | 96 | 51 | 1 | 14 | 109 | 110 | 204 | 6.65e-22 | 95.9 |
| Msa0569940 | MtrunA17_Chr6g0453751 | 48.315 | 89 | 37 | 2 | 14 | 93 | 22 | 110 | 7.69e-22 | 89.4 |
| Msa0569940 | MtrunA17_Chr3g0125801 | 45.098 | 102 | 55 | 1 | 14 | 115 | 16 | 116 | 2.32e-21 | 92.0 |
| Msa0569940 | MtrunA17_Chr1g0177901 | 45.652 | 92 | 48 | 2 | 25 | 116 | 5 | 94 | 2.95e-21 | 90.1 |
| Msa0569940 | MtrunA17_Chr5g0417621 | 41.748 | 103 | 59 | 1 | 14 | 116 | 134 | 235 | 3.45e-21 | 93.6 |
| Msa0569940 | MtrunA17_Chr4g0042501 | 41.176 | 102 | 59 | 1 | 14 | 115 | 105 | 205 | 3.46e-21 | 93.2 |
| Msa0569940 | MtrunA17_Chr6g0460661 | 39.175 | 97 | 58 | 1 | 14 | 110 | 16 | 111 | 7.75e-21 | 87.4 |
| Msa0569940 | MtrunA17_Chr7g0238651 | 31.443 | 194 | 107 | 5 | 13 | 182 | 6 | 197 | 1.29e-20 | 90.9 |
| Msa0569940 | MtrunA17_Chr7g0254261 | 32.984 | 191 | 112 | 5 | 1 | 182 | 81 | 264 | 3.18e-20 | 89.7 |
| Msa0569940 | MtrunA17_Chr7g0228481 | 40.000 | 120 | 63 | 4 | 8 | 120 | 210 | 327 | 3.63e-20 | 90.5 |
| Msa0569940 | MtrunA17_Chr6g0460671 | 33.333 | 156 | 101 | 2 | 14 | 169 | 99 | 251 | 4.73e-20 | 89.4 |
| Msa0569940 | MtrunA17_Chr7g0233061 | 42.342 | 111 | 48 | 4 | 12 | 116 | 178 | 278 | 3.42e-19 | 87.0 |
| Msa0569940 | MtrunA17_Chr3g0145551 | 60.784 | 51 | 20 | 0 | 91 | 141 | 1 | 51 | 2.54e-16 | 72.8 |
| Msa0569940 | MtrunA17_Chr1g0193901 | 57.692 | 52 | 22 | 0 | 17 | 68 | 17 | 68 | 1.86e-15 | 71.2 |
| Msa0569940 | MtrunA17_Chr1g0193891 | 57.692 | 52 | 22 | 0 | 17 | 68 | 17 | 68 | 1.86e-15 | 71.2 |
| Msa0569940 | MtrunA17_Chr1g0193871 | 57.692 | 52 | 22 | 0 | 17 | 68 | 17 | 68 | 1.86e-15 | 71.2 |
| Msa0569940 | MtrunA17_Chr1g0193881 | 57.692 | 52 | 22 | 0 | 17 | 68 | 17 | 68 | 1.86e-15 | 71.2 |
| Msa0569940 | MtrunA17_Chr5g0395231 | 56.863 | 51 | 22 | 0 | 78 | 128 | 5 | 55 | 5.73e-15 | 73.6 |
| Msa0569940 | MtrunA17_Chr5g0416341 | 35.354 | 99 | 63 | 1 | 17 | 115 | 29 | 126 | 8.94e-15 | 74.7 |
| Msa0569940 | MtrunA17_Chr4g0042621 | 52.308 | 65 | 31 | 0 | 88 | 152 | 14 | 78 | 1.71e-14 | 73.2 |
| Msa0569940 | MtrunA17_Chr8g0362231 | 36.364 | 99 | 61 | 2 | 17 | 114 | 25 | 122 | 2.92e-14 | 73.2 |
| Msa0569940 | MtrunA17_Chr7g0247141 | 59.574 | 47 | 18 | 1 | 1 | 46 | 1 | 47 | 8.87e-14 | 65.5 |
| Msa0569940 | MtrunA17_Chr5g0434871 | 51.111 | 45 | 22 | 0 | 74 | 118 | 2 | 46 | 2.93e-13 | 63.9 |
| Msa0569940 | MtrunA17_Chr7g0233151 | 47.059 | 51 | 27 | 0 | 65 | 115 | 1 | 51 | 2.61e-12 | 64.3 |
| Msa0569940 | MtrunA17_Chr3g0104491 | 38.028 | 71 | 39 | 2 | 53 | 119 | 1 | 70 | 1.09e-11 | 64.3 |
| Msa0569940 | MtrunA17_Chr5g0434891 | 54.545 | 44 | 20 | 0 | 77 | 120 | 1 | 44 | 4.09e-11 | 60.5 |
| Msa0569940 | MtrunA17_Chr3g0145571 | 88.462 | 26 | 3 | 0 | 1 | 26 | 1 | 26 | 8.50e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569940 | AT4G38620.1 | 76.510 | 149 | 34 | 1 | 1 | 149 | 1 | 148 | 8.82e-82 | 249 |
| Msa0569940 | AT2G16720.1 | 82.171 | 129 | 23 | 0 | 1 | 129 | 1 | 129 | 6.93e-81 | 246 |
| Msa0569940 | AT4G09460.1 | 63.483 | 178 | 50 | 2 | 1 | 176 | 1 | 165 | 1.88e-78 | 239 |
| Msa0569940 | AT4G34990.1 | 67.296 | 159 | 44 | 1 | 1 | 159 | 1 | 151 | 3.37e-78 | 240 |
| Msa0569940 | AT1G22640.1 | 80.315 | 127 | 25 | 0 | 1 | 127 | 1 | 127 | 1.72e-77 | 238 |
| Msa0569940 | AT1G35515.1 | 78.571 | 126 | 27 | 0 | 1 | 126 | 1 | 126 | 5.04e-74 | 227 |
| Msa0569940 | AT4G12350.1 | 49.495 | 198 | 90 | 2 | 1 | 198 | 1 | 188 | 2.31e-66 | 210 |
| Msa0569940 | AT5G26660.1 | 60.248 | 161 | 61 | 1 | 1 | 161 | 1 | 158 | 5.80e-66 | 211 |
| Msa0569940 | AT5G16770.4 | 67.188 | 128 | 42 | 0 | 1 | 128 | 1 | 128 | 1.05e-65 | 209 |
| Msa0569940 | AT5G16770.3 | 67.188 | 128 | 42 | 0 | 1 | 128 | 1 | 128 | 1.05e-65 | 209 |
| Msa0569940 | AT3G02940.2 | 68.750 | 128 | 40 | 0 | 1 | 128 | 1 | 128 | 2.48e-65 | 208 |
| Msa0569940 | AT5G16770.1 | 67.188 | 128 | 42 | 0 | 1 | 128 | 1 | 128 | 2.89e-65 | 209 |
| Msa0569940 | AT5G16770.2 | 67.188 | 128 | 42 | 0 | 1 | 128 | 1 | 128 | 2.89e-65 | 209 |
| Msa0569940 | AT1G57560.2 | 54.688 | 192 | 78 | 2 | 1 | 183 | 1 | 192 | 3.01e-65 | 207 |
| Msa0569940 | AT4G21440.1 | 62.162 | 148 | 53 | 1 | 1 | 145 | 1 | 148 | 4.06e-65 | 209 |
| Msa0569940 | AT1G57560.1 | 59.494 | 158 | 63 | 1 | 1 | 158 | 1 | 157 | 4.57e-65 | 207 |
| Msa0569940 | AT3G02940.1 | 68.750 | 128 | 40 | 0 | 1 | 128 | 1 | 128 | 6.17e-65 | 207 |
| Msa0569940 | AT3G02940.3 | 68.750 | 128 | 40 | 0 | 1 | 128 | 1 | 128 | 6.17e-65 | 207 |
| Msa0569940 | AT4G22680.1 | 68.992 | 129 | 40 | 0 | 1 | 129 | 1 | 129 | 7.05e-65 | 206 |
| Msa0569940 | AT4G28110.1 | 67.188 | 128 | 42 | 0 | 1 | 128 | 1 | 128 | 1.58e-64 | 205 |
| Msa0569940 | AT1G09540.1 | 56.395 | 172 | 74 | 1 | 1 | 171 | 1 | 172 | 8.46e-64 | 206 |
| Msa0569940 | AT3G61250.1 | 57.516 | 153 | 65 | 0 | 1 | 153 | 1 | 153 | 2.09e-63 | 203 |
| Msa0569940 | AT4G05100.1 | 68.217 | 129 | 40 | 1 | 1 | 128 | 1 | 129 | 3.21e-63 | 203 |
| Msa0569940 | AT5G15310.4 | 51.053 | 190 | 85 | 3 | 1 | 185 | 1 | 187 | 7.40e-63 | 199 |
| Msa0569940 | AT4G01680.3 | 51.232 | 203 | 88 | 3 | 1 | 203 | 1 | 192 | 1.64e-62 | 199 |
| Msa0569940 | AT5G15310.2 | 51.053 | 190 | 85 | 3 | 1 | 185 | 1 | 187 | 3.63e-62 | 200 |
| Msa0569940 | AT5G15310.1 | 51.053 | 190 | 85 | 3 | 1 | 185 | 1 | 187 | 4.26e-62 | 200 |
| Msa0569940 | AT4G01680.1 | 66.667 | 132 | 44 | 0 | 1 | 132 | 1 | 132 | 1.03e-61 | 199 |
| Msa0569940 | AT5G07690.1 | 64.341 | 129 | 46 | 0 | 1 | 129 | 1 | 129 | 2.59e-61 | 199 |
| Msa0569940 | AT1G34670.1 | 63.636 | 132 | 48 | 0 | 1 | 132 | 1 | 132 | 3.97e-61 | 199 |
| Msa0569940 | AT3G01140.2 | 51.075 | 186 | 82 | 1 | 1 | 186 | 1 | 177 | 5.03e-61 | 198 |
| Msa0569940 | AT1G74080.1 | 55.280 | 161 | 70 | 1 | 1 | 161 | 1 | 159 | 7.04e-61 | 197 |
| Msa0569940 | AT5G16600.1 | 60.417 | 144 | 57 | 0 | 1 | 144 | 1 | 144 | 1.29e-60 | 196 |
| Msa0569940 | AT5G61420.2 | 63.566 | 129 | 47 | 0 | 1 | 129 | 1 | 129 | 1.54e-60 | 197 |
| Msa0569940 | AT5G60890.1 | 62.791 | 129 | 48 | 0 | 1 | 129 | 1 | 129 | 2.16e-60 | 195 |
| Msa0569940 | AT1G66230.1 | 63.566 | 129 | 47 | 0 | 1 | 129 | 1 | 129 | 4.36e-60 | 194 |
| Msa0569940 | AT3G13540.1 | 63.492 | 126 | 46 | 0 | 4 | 129 | 15 | 140 | 7.48e-60 | 192 |
| Msa0569940 | AT1G18570.1 | 64.615 | 130 | 45 | 1 | 1 | 129 | 1 | 130 | 8.32e-60 | 195 |
| Msa0569940 | AT5G65230.1 | 64.844 | 128 | 45 | 0 | 1 | 128 | 1 | 128 | 1.29e-59 | 193 |
| Msa0569940 | AT5G10280.1 | 60.938 | 128 | 50 | 0 | 1 | 128 | 1 | 128 | 1.30e-59 | 194 |
| Msa0569940 | AT4G17785.1 | 64.341 | 129 | 45 | 1 | 1 | 128 | 1 | 129 | 1.48e-59 | 195 |
| Msa0569940 | AT4G17785.2 | 64.341 | 129 | 45 | 1 | 1 | 128 | 1 | 129 | 1.61e-59 | 194 |
| Msa0569940 | AT5G07700.1 | 62.016 | 129 | 49 | 0 | 1 | 129 | 1 | 129 | 7.02e-59 | 192 |
| Msa0569940 | AT5G07700.2 | 62.016 | 129 | 49 | 0 | 1 | 129 | 1 | 129 | 7.02e-59 | 192 |
| Msa0569940 | AT4G01680.2 | 62.411 | 141 | 41 | 1 | 1 | 129 | 1 | 141 | 3.11e-58 | 191 |
| Msa0569940 | AT3G01140.1 | 50.273 | 183 | 82 | 1 | 4 | 186 | 47 | 220 | 4.31e-58 | 192 |
| Msa0569940 | AT5G62320.1 | 61.654 | 133 | 44 | 1 | 2 | 127 | 3 | 135 | 1.70e-57 | 186 |
| Msa0569940 | AT3G23250.1 | 49.457 | 184 | 90 | 2 | 1 | 183 | 1 | 182 | 3.34e-57 | 186 |
| Msa0569940 | AT5G49330.1 | 67.797 | 118 | 38 | 0 | 1 | 118 | 1 | 118 | 6.67e-57 | 187 |
| Msa0569940 | AT2G47460.1 | 61.429 | 140 | 54 | 0 | 1 | 140 | 1 | 140 | 8.83e-57 | 188 |
| Msa0569940 | AT5G14340.1 | 59.398 | 133 | 54 | 0 | 1 | 133 | 13 | 145 | 9.02e-57 | 185 |
| Msa0569940 | AT5G54230.1 | 65.625 | 128 | 44 | 0 | 1 | 128 | 1 | 128 | 1.10e-56 | 186 |
| Msa0569940 | AT3G13890.2 | 66.949 | 118 | 39 | 0 | 1 | 118 | 1 | 118 | 2.92e-56 | 186 |
| Msa0569940 | AT5G56110.1 | 59.091 | 132 | 54 | 0 | 1 | 132 | 1 | 132 | 3.47e-56 | 185 |
| Msa0569940 | AT1G06180.1 | 51.667 | 180 | 80 | 2 | 1 | 180 | 1 | 173 | 5.11e-56 | 182 |
| Msa0569940 | AT3G62610.1 | 53.750 | 160 | 69 | 1 | 1 | 160 | 1 | 155 | 5.70e-56 | 185 |
| Msa0569940 | AT3G12720.1 | 62.810 | 121 | 45 | 0 | 6 | 126 | 16 | 136 | 6.25e-56 | 184 |
| Msa0569940 | AT2G31180.1 | 54.088 | 159 | 62 | 1 | 1 | 148 | 1 | 159 | 4.97e-55 | 180 |
| Msa0569940 | AT1G16490.1 | 54.605 | 152 | 59 | 1 | 2 | 153 | 4 | 145 | 2.32e-54 | 179 |
| Msa0569940 | AT1G79180.1 | 67.826 | 115 | 37 | 0 | 2 | 116 | 4 | 118 | 7.04e-54 | 178 |
| Msa0569940 | AT1G63910.1 | 55.705 | 149 | 58 | 1 | 1 | 149 | 1 | 141 | 1.25e-53 | 180 |
| Msa0569940 | AT3G13890.1 | 62.205 | 127 | 39 | 1 | 1 | 118 | 1 | 127 | 4.22e-53 | 178 |
| Msa0569940 | AT3G28470.1 | 50.000 | 164 | 81 | 1 | 1 | 164 | 1 | 163 | 1.23e-52 | 176 |
| Msa0569940 | AT3G12820.1 | 65.812 | 117 | 40 | 0 | 3 | 119 | 5 | 121 | 4.08e-52 | 172 |
| Msa0569940 | AT1G56160.1 | 64.348 | 115 | 41 | 0 | 2 | 116 | 4 | 118 | 2.10e-51 | 172 |
| Msa0569940 | AT1G74430.1 | 55.639 | 133 | 59 | 0 | 1 | 133 | 1 | 133 | 3.55e-51 | 171 |
| Msa0569940 | AT1G74650.1 | 62.931 | 116 | 43 | 0 | 1 | 116 | 1 | 116 | 1.66e-50 | 171 |
| Msa0569940 | AT2G36890.1 | 48.876 | 178 | 76 | 2 | 1 | 177 | 1 | 164 | 1.98e-49 | 167 |
| Msa0569940 | AT3G47600.1 | 60.345 | 116 | 46 | 0 | 1 | 116 | 1 | 116 | 3.74e-49 | 167 |
| Msa0569940 | AT2G36890.2 | 48.876 | 178 | 76 | 2 | 1 | 177 | 42 | 205 | 6.43e-49 | 167 |
| Msa0569940 | AT5G14750.1 | 45.304 | 181 | 89 | 3 | 14 | 194 | 18 | 188 | 7.30e-49 | 162 |
| Msa0569940 | AT5G62470.2 | 61.207 | 116 | 45 | 0 | 1 | 116 | 1 | 116 | 7.69e-49 | 167 |
| Msa0569940 | AT1G08810.1 | 62.069 | 116 | 44 | 0 | 1 | 116 | 1 | 116 | 1.02e-48 | 164 |
| Msa0569940 | AT4G37780.1 | 60.833 | 120 | 46 | 1 | 1 | 119 | 1 | 120 | 3.77e-48 | 164 |
| Msa0569940 | AT5G57620.1 | 59.167 | 120 | 48 | 1 | 1 | 119 | 1 | 120 | 4.41e-48 | 164 |
| Msa0569940 | AT5G23000.1 | 59.829 | 117 | 46 | 1 | 1 | 116 | 1 | 117 | 1.14e-47 | 163 |
| Msa0569940 | AT3G28910.1 | 55.039 | 129 | 56 | 1 | 1 | 129 | 1 | 127 | 1.15e-47 | 163 |
| Msa0569940 | AT5G62470.1 | 61.207 | 116 | 44 | 1 | 1 | 116 | 1 | 115 | 2.33e-47 | 163 |
| Msa0569940 | AT5G65790.1 | 57.500 | 120 | 50 | 1 | 1 | 119 | 1 | 120 | 3.19e-47 | 163 |
| Msa0569940 | AT1G79180.2 | 52.703 | 148 | 37 | 1 | 2 | 116 | 4 | 151 | 3.25e-47 | 162 |
| Msa0569940 | AT5G12870.1 | 65.049 | 103 | 36 | 0 | 14 | 116 | 20 | 122 | 5.80e-47 | 160 |
| Msa0569940 | AT3G08500.1 | 62.037 | 108 | 41 | 0 | 9 | 116 | 27 | 134 | 7.65e-47 | 161 |
| Msa0569940 | AT3G49690.1 | 57.500 | 120 | 50 | 1 | 1 | 119 | 1 | 120 | 1.18e-46 | 160 |
| Msa0569940 | AT3G01530.1 | 48.148 | 162 | 82 | 1 | 14 | 175 | 27 | 186 | 5.18e-46 | 155 |
| Msa0569940 | AT5G40330.1 | 56.881 | 109 | 46 | 1 | 9 | 116 | 8 | 116 | 3.50e-45 | 153 |
| Msa0569940 | AT5G40350.1 | 50.350 | 143 | 71 | 0 | 14 | 156 | 19 | 161 | 3.75e-44 | 150 |
| Msa0569940 | AT3G27810.1 | 52.448 | 143 | 55 | 2 | 14 | 156 | 22 | 151 | 4.05e-44 | 150 |
| Msa0569940 | AT5G35550.1 | 59.259 | 108 | 44 | 0 | 9 | 116 | 11 | 118 | 6.00e-44 | 151 |
| Msa0569940 | AT3G27920.1 | 52.500 | 120 | 54 | 1 | 8 | 124 | 10 | 129 | 1.11e-43 | 150 |
| Msa0569940 | AT3G11440.2 | 62.745 | 102 | 38 | 0 | 14 | 115 | 43 | 144 | 1.80e-43 | 155 |
| Msa0569940 | AT5G26660.2 | 59.829 | 117 | 44 | 1 | 45 | 161 | 14 | 127 | 3.34e-43 | 151 |
| Msa0569940 | AT1G18710.1 | 46.032 | 189 | 81 | 3 | 1 | 188 | 1 | 169 | 4.66e-43 | 149 |
| Msa0569940 | AT5G55020.1 | 63.107 | 103 | 38 | 0 | 14 | 116 | 28 | 130 | 5.58e-43 | 155 |
| Msa0569940 | AT3G11440.3 | 62.745 | 102 | 38 | 0 | 14 | 115 | 43 | 144 | 7.84e-43 | 155 |
| Msa0569940 | AT3G11440.4 | 62.745 | 102 | 38 | 0 | 14 | 115 | 43 | 144 | 7.84e-43 | 155 |
| Msa0569940 | AT3G11440.1 | 62.745 | 102 | 38 | 0 | 14 | 115 | 43 | 144 | 7.84e-43 | 155 |
| Msa0569940 | AT3G48920.1 | 58.491 | 106 | 44 | 0 | 9 | 114 | 15 | 120 | 9.12e-43 | 148 |
| Msa0569940 | AT3G24310.1 | 63.725 | 102 | 37 | 0 | 14 | 115 | 20 | 121 | 2.30e-42 | 147 |
| Msa0569940 | AT4G13480.1 | 64.706 | 102 | 36 | 0 | 14 | 115 | 8 | 109 | 2.38e-42 | 147 |
| Msa0569940 | AT1G25340.1 | 38.967 | 213 | 115 | 5 | 14 | 221 | 20 | 222 | 6.15e-42 | 147 |
| Msa0569940 | AT4G26930.1 | 62.376 | 101 | 38 | 0 | 14 | 114 | 21 | 121 | 6.66e-42 | 149 |
| Msa0569940 | AT4G25560.1 | 62.745 | 102 | 38 | 0 | 14 | 115 | 12 | 113 | 8.73e-42 | 146 |
| Msa0569940 | AT2G26960.1 | 42.541 | 181 | 88 | 3 | 9 | 173 | 17 | 197 | 8.99e-42 | 150 |
| Msa0569940 | AT5G06100.1 | 60.784 | 102 | 40 | 0 | 14 | 115 | 34 | 135 | 1.36e-41 | 150 |
| Msa0569940 | AT5G52260.1 | 58.261 | 115 | 48 | 0 | 1 | 115 | 1 | 115 | 2.74e-41 | 145 |
| Msa0569940 | AT5G06100.5 | 60.784 | 102 | 40 | 0 | 14 | 115 | 34 | 135 | 4.27e-41 | 150 |
| Msa0569940 | AT5G06100.2 | 60.784 | 102 | 40 | 0 | 14 | 115 | 34 | 135 | 4.27e-41 | 150 |
| Msa0569940 | AT5G06100.3 | 60.784 | 102 | 40 | 0 | 14 | 115 | 34 | 135 | 4.27e-41 | 150 |
| Msa0569940 | AT5G06100.4 | 60.784 | 102 | 40 | 0 | 14 | 115 | 34 | 135 | 4.27e-41 | 150 |
| Msa0569940 | AT2G32460.2 | 59.804 | 102 | 41 | 0 | 14 | 115 | 8 | 109 | 5.15e-41 | 149 |
| Msa0569940 | AT2G32460.1 | 59.804 | 102 | 41 | 0 | 14 | 115 | 20 | 121 | 5.45e-41 | 149 |
| Msa0569940 | AT5G52600.1 | 41.176 | 170 | 91 | 1 | 9 | 169 | 9 | 178 | 6.20e-41 | 142 |
| Msa0569940 | AT2G47190.1 | 40.415 | 193 | 95 | 3 | 8 | 180 | 16 | 208 | 1.13e-40 | 143 |
| Msa0569940 | AT1G68320.1 | 59.804 | 102 | 41 | 0 | 14 | 115 | 21 | 122 | 6.11e-40 | 142 |
| Msa0569940 | AT1G48000.1 | 58.416 | 101 | 42 | 0 | 14 | 114 | 34 | 134 | 9.57e-40 | 140 |
| Msa0569940 | AT3G30210.1 | 61.386 | 101 | 39 | 0 | 14 | 114 | 29 | 129 | 1.16e-39 | 140 |
| Msa0569940 | AT3G53200.1 | 60.784 | 102 | 40 | 0 | 14 | 115 | 11 | 112 | 2.11e-39 | 139 |
| Msa0569940 | AT5G49620.1 | 48.077 | 156 | 69 | 1 | 8 | 151 | 22 | 177 | 2.65e-38 | 138 |
| Msa0569940 | AT5G59780.3 | 54.206 | 107 | 49 | 0 | 9 | 115 | 5 | 111 | 2.95e-38 | 136 |
| Msa0569940 | AT3G46130.1 | 51.261 | 119 | 56 | 1 | 8 | 124 | 5 | 123 | 3.99e-38 | 136 |
| Msa0569940 | AT3G06490.1 | 56.303 | 119 | 52 | 0 | 14 | 132 | 21 | 139 | 9.65e-38 | 137 |
| Msa0569940 | AT1G25340.2 | 37.559 | 213 | 113 | 6 | 14 | 221 | 20 | 217 | 2.78e-37 | 134 |
| Msa0569940 | AT1G25340.3 | 37.559 | 213 | 113 | 6 | 14 | 221 | 20 | 217 | 5.64e-37 | 134 |
| Msa0569940 | AT1G22640.3 | 81.429 | 70 | 13 | 0 | 58 | 127 | 1 | 70 | 5.99e-37 | 131 |
| Msa0569940 | AT5G14750.3 | 45.161 | 155 | 72 | 4 | 40 | 194 | 13 | 154 | 3.13e-36 | 128 |
| Msa0569940 | AT1G66370.1 | 51.304 | 115 | 52 | 1 | 1 | 115 | 1 | 111 | 5.63e-36 | 130 |
| Msa0569940 | AT5G49620.2 | 44.118 | 170 | 69 | 2 | 8 | 151 | 22 | 191 | 1.33e-34 | 129 |
| Msa0569940 | AT1G66380.1 | 56.863 | 102 | 44 | 0 | 14 | 115 | 10 | 111 | 1.73e-33 | 120 |
| Msa0569940 | AT2G26950.1 | 47.788 | 113 | 58 | 1 | 9 | 121 | 13 | 124 | 3.16e-33 | 126 |
| Msa0569940 | AT3G12820.2 | 73.611 | 72 | 19 | 0 | 48 | 119 | 2 | 73 | 3.79e-33 | 121 |
| Msa0569940 | AT1G56650.1 | 37.019 | 208 | 107 | 5 | 14 | 207 | 10 | 207 | 3.52e-32 | 120 |
| Msa0569940 | AT1G66390.1 | 55.882 | 102 | 45 | 0 | 14 | 115 | 10 | 111 | 4.55e-32 | 120 |
| Msa0569940 | AT3G60460.1 | 49.541 | 109 | 54 | 1 | 7 | 114 | 6 | 114 | 1.60e-31 | 120 |
| Msa0569940 | AT5G35550.2 | 63.636 | 77 | 28 | 0 | 40 | 116 | 45 | 121 | 5.76e-31 | 117 |
| Msa0569940 | AT3G27810.2 | 35.533 | 197 | 81 | 4 | 45 | 241 | 4 | 154 | 1.59e-30 | 114 |
| Msa0569940 | AT3G47600.2 | 66.667 | 72 | 24 | 0 | 45 | 116 | 39 | 110 | 1.61e-30 | 118 |
| Msa0569940 | AT3G46130.3 | 61.446 | 83 | 30 | 1 | 44 | 124 | 9 | 91 | 2.46e-30 | 115 |
| Msa0569940 | AT3G53200.2 | 67.606 | 71 | 23 | 0 | 45 | 115 | 9 | 79 | 2.84e-30 | 114 |
| Msa0569940 | AT5G59780.2 | 67.606 | 71 | 23 | 0 | 45 | 115 | 20 | 90 | 4.36e-30 | 114 |
| Msa0569940 | AT5G40350.2 | 47.321 | 112 | 59 | 0 | 45 | 156 | 5 | 116 | 4.48e-30 | 112 |
| Msa0569940 | AT3G46130.4 | 67.606 | 71 | 23 | 0 | 45 | 115 | 20 | 90 | 5.87e-30 | 114 |
| Msa0569940 | AT3G09230.1 | 41.243 | 177 | 88 | 5 | 14 | 185 | 55 | 220 | 1.21e-29 | 117 |
| Msa0569940 | AT5G67300.1 | 41.463 | 164 | 85 | 5 | 14 | 172 | 6 | 163 | 5.29e-29 | 113 |
| Msa0569940 | AT1G71030.2 | 44.526 | 137 | 71 | 3 | 51 | 183 | 5 | 140 | 7.48e-29 | 109 |
| Msa0569940 | AT5G40360.1 | 43.220 | 118 | 65 | 2 | 1 | 118 | 145 | 260 | 8.54e-29 | 114 |
| Msa0569940 | AT1G71030.1 | 44.526 | 137 | 71 | 3 | 51 | 183 | 19 | 154 | 1.20e-28 | 109 |
| Msa0569940 | AT3G50060.1 | 49.020 | 102 | 51 | 1 | 14 | 115 | 6 | 106 | 3.49e-27 | 108 |
| Msa0569940 | AT3G23250.2 | 43.939 | 132 | 61 | 3 | 58 | 183 | 1 | 125 | 4.03e-27 | 106 |
| Msa0569940 | AT3G27785.1 | 47.170 | 106 | 54 | 2 | 14 | 119 | 189 | 292 | 4.95e-27 | 110 |
| Msa0569940 | AT3G55730.1 | 53.398 | 103 | 45 | 2 | 14 | 115 | 56 | 156 | 7.62e-27 | 109 |
| Msa0569940 | AT5G58850.1 | 44.118 | 102 | 56 | 1 | 14 | 115 | 105 | 205 | 1.14e-26 | 109 |
| Msa0569940 | AT5G14750.4 | 47.619 | 105 | 49 | 2 | 58 | 162 | 1 | 99 | 1.19e-26 | 102 |
| Msa0569940 | AT5G14750.2 | 47.619 | 105 | 49 | 2 | 58 | 162 | 1 | 99 | 1.19e-26 | 102 |
| Msa0569940 | AT4G37260.1 | 43.262 | 141 | 66 | 3 | 14 | 141 | 13 | 152 | 1.53e-26 | 107 |
| Msa0569940 | AT2G23290.1 | 50.980 | 102 | 49 | 1 | 14 | 115 | 13 | 113 | 1.91e-26 | 106 |
| Msa0569940 | AT4G18770.1 | 44.340 | 106 | 58 | 1 | 14 | 119 | 217 | 321 | 1.93e-26 | 108 |
| Msa0569940 | AT2G39880.1 | 50.980 | 102 | 49 | 1 | 14 | 115 | 50 | 150 | 2.12e-26 | 107 |
| Msa0569940 | AT1G18960.1 | 43.220 | 118 | 60 | 4 | 14 | 129 | 10 | 122 | 3.40e-26 | 105 |
| Msa0569940 | AT5G02320.1 | 44.660 | 103 | 56 | 1 | 14 | 116 | 127 | 228 | 7.41e-26 | 107 |
| Msa0569940 | AT5G02320.2 | 44.660 | 103 | 56 | 1 | 14 | 116 | 127 | 228 | 7.41e-26 | 107 |
| Msa0569940 | AT5G02320.3 | 44.660 | 103 | 56 | 1 | 14 | 116 | 67 | 168 | 1.22e-25 | 107 |
| Msa0569940 | AT4G32730.5 | 30.556 | 216 | 127 | 5 | 14 | 225 | 87 | 283 | 1.22e-25 | 107 |
| Msa0569940 | AT4G32730.4 | 30.556 | 216 | 127 | 5 | 14 | 225 | 87 | 283 | 1.22e-25 | 107 |
| Msa0569940 | AT4G32730.3 | 30.556 | 216 | 127 | 5 | 14 | 225 | 87 | 283 | 1.22e-25 | 107 |
| Msa0569940 | AT4G32730.2 | 30.556 | 216 | 127 | 5 | 14 | 225 | 87 | 283 | 1.22e-25 | 107 |
| Msa0569940 | AT4G32730.1 | 30.556 | 216 | 127 | 5 | 14 | 225 | 87 | 283 | 1.42e-25 | 107 |
| Msa0569940 | AT5G11050.1 | 43.137 | 102 | 57 | 1 | 14 | 115 | 105 | 205 | 2.92e-25 | 105 |
| Msa0569940 | AT3G09370.2 | 44.340 | 106 | 50 | 2 | 14 | 115 | 135 | 235 | 1.30e-24 | 104 |
| Msa0569940 | AT3G09370.1 | 44.340 | 106 | 50 | 2 | 14 | 115 | 130 | 230 | 1.33e-24 | 103 |
| Msa0569940 | AT3G09370.3 | 37.580 | 157 | 84 | 3 | 14 | 161 | 143 | 294 | 1.54e-24 | 103 |
| Msa0569940 | AT1G66380.3 | 59.722 | 72 | 29 | 0 | 44 | 115 | 7 | 78 | 4.13e-24 | 95.1 |
| Msa0569940 | AT5G11510.3 | 41.905 | 105 | 60 | 1 | 14 | 118 | 81 | 184 | 1.17e-23 | 102 |
| Msa0569940 | AT5G11510.1 | 41.905 | 105 | 60 | 1 | 14 | 118 | 81 | 184 | 1.17e-23 | 102 |
| Msa0569940 | AT5G11510.4 | 41.905 | 105 | 60 | 1 | 14 | 118 | 81 | 184 | 1.17e-23 | 102 |
| Msa0569940 | AT5G11510.2 | 41.905 | 105 | 60 | 1 | 14 | 118 | 81 | 184 | 1.71e-23 | 101 |
| Msa0569940 | AT5G11510.2 | 33.654 | 104 | 67 | 2 | 10 | 112 | 25 | 127 | 1.09e-11 | 66.2 |
| Msa0569940 | AT5G11510.5 | 41.905 | 105 | 60 | 1 | 14 | 118 | 81 | 184 | 1.88e-23 | 101 |
| Msa0569940 | AT5G11510.5 | 33.654 | 104 | 67 | 2 | 10 | 112 | 25 | 127 | 1.14e-11 | 66.2 |
| Msa0569940 | AT1G17950.1 | 42.105 | 114 | 59 | 2 | 14 | 121 | 5 | 117 | 2.87e-23 | 96.7 |
| Msa0569940 | AT2G25230.1 | 39.316 | 117 | 70 | 1 | 4 | 120 | 16 | 131 | 1.67e-22 | 94.4 |
| Msa0569940 | AT1G69560.2 | 40.741 | 108 | 63 | 1 | 9 | 116 | 118 | 224 | 4.91e-22 | 95.1 |
| Msa0569940 | AT1G69560.1 | 40.741 | 108 | 63 | 1 | 9 | 116 | 102 | 208 | 5.90e-22 | 94.7 |
| Msa0569940 | AT5G17800.1 | 38.462 | 130 | 77 | 2 | 14 | 143 | 93 | 219 | 2.16e-21 | 93.2 |
| Msa0569940 | AT1G26780.1 | 42.157 | 102 | 58 | 1 | 14 | 115 | 98 | 198 | 3.11e-21 | 92.0 |
| Msa0569940 | AT1G26780.2 | 42.157 | 102 | 58 | 1 | 14 | 115 | 98 | 198 | 4.06e-21 | 92.8 |
| Msa0569940 | AT1G73410.1 | 44.660 | 103 | 54 | 2 | 14 | 115 | 6 | 106 | 7.45e-21 | 90.1 |
| Msa0569940 | AT4G33450.1 | 37.168 | 113 | 65 | 2 | 3 | 115 | 13 | 119 | 8.07e-21 | 90.1 |
| Msa0569940 | AT1G73410.2 | 44.660 | 103 | 54 | 2 | 14 | 115 | 6 | 106 | 1.09e-20 | 88.6 |
| Msa0569940 | AT3G29020.1 | 38.835 | 103 | 62 | 1 | 14 | 116 | 65 | 166 | 3.11e-20 | 88.2 |
| Msa0569940 | AT3G29020.2 | 38.835 | 103 | 62 | 1 | 14 | 116 | 67 | 168 | 3.12e-20 | 89.7 |
| Msa0569940 | AT4G00540.2 | 43.396 | 106 | 56 | 2 | 14 | 116 | 103 | 207 | 4.26e-20 | 90.5 |
| Msa0569940 | AT4G00540.1 | 43.396 | 106 | 56 | 2 | 14 | 116 | 101 | 205 | 7.13e-20 | 90.1 |
| Msa0569940 | AT4G00540.1 | 32.432 | 111 | 67 | 3 | 10 | 112 | 40 | 150 | 5.67e-12 | 66.6 |
| Msa0569940 | AT5G61420.1 | 71.429 | 49 | 14 | 0 | 81 | 129 | 2 | 50 | 6.15e-19 | 85.5 |
| Msa0569940 | AT1G66380.2 | 50.633 | 79 | 39 | 0 | 14 | 92 | 10 | 88 | 6.72e-19 | 81.3 |
| Msa0569940 | AT5G40430.1 | 36.036 | 111 | 69 | 2 | 4 | 114 | 44 | 152 | 9.62e-18 | 81.6 |
| Msa0569940 | AT1G22640.2 | 76.190 | 42 | 10 | 0 | 88 | 129 | 16 | 57 | 1.24e-16 | 77.0 |
| Msa0569940 | AT2G37630.1 | 41.667 | 96 | 54 | 1 | 17 | 110 | 7 | 102 | 2.60e-16 | 79.0 |
| Msa0569940 | AT5G39700.1 | 37.000 | 100 | 62 | 1 | 15 | 114 | 57 | 155 | 4.32e-16 | 75.9 |
| Msa0569940 | AT2G02820.2 | 38.384 | 99 | 60 | 1 | 17 | 115 | 33 | 130 | 6.70e-16 | 78.6 |
| Msa0569940 | AT2G02820.1 | 38.384 | 99 | 60 | 1 | 17 | 115 | 33 | 130 | 8.66e-16 | 78.2 |
| Msa0569940 | AT2G02820.3 | 38.384 | 99 | 60 | 1 | 17 | 115 | 33 | 130 | 2.13e-15 | 76.3 |
| Msa0569940 | AT5G59780.1 | 63.043 | 46 | 17 | 0 | 70 | 115 | 1 | 46 | 3.24e-15 | 72.8 |
| Msa0569940 | AT4G25560.2 | 67.442 | 43 | 14 | 0 | 73 | 115 | 5 | 47 | 3.82e-15 | 73.6 |
| Msa0569940 | AT3G46130.2 | 56.140 | 57 | 23 | 1 | 70 | 124 | 1 | 57 | 3.87e-15 | 73.2 |
| Msa0569940 | AT4G28110.2 | 68.293 | 41 | 13 | 0 | 88 | 128 | 4 | 44 | 6.90e-15 | 72.4 |
| Msa0569940 | AT1G14350.2 | 37.374 | 99 | 61 | 1 | 17 | 115 | 28 | 125 | 9.61e-15 | 74.7 |
| Msa0569940 | AT1G14350.1 | 37.374 | 99 | 61 | 1 | 17 | 115 | 28 | 125 | 9.61e-15 | 74.7 |
| Msa0569940 | AT5G15310.3 | 40.777 | 103 | 53 | 3 | 88 | 185 | 9 | 108 | 4.12e-14 | 71.2 |
| Msa0569940 | AT3G28910.2 | 52.830 | 53 | 23 | 1 | 77 | 129 | 1 | 51 | 6.12e-13 | 67.8 |
| Msa0569940 | AT1G74650.3 | 65.000 | 40 | 14 | 0 | 77 | 116 | 1 | 40 | 2.73e-12 | 66.2 |
| Msa0569940 | AT1G74430.2 | 47.368 | 57 | 30 | 0 | 77 | 133 | 8 | 64 | 2.84e-12 | 65.1 |
| Msa0569940 | AT3G18100.1 | 36.792 | 106 | 61 | 2 | 12 | 117 | 544 | 643 | 6.41e-12 | 67.0 |
| Msa0569940 | AT5G14340.2 | 54.348 | 46 | 21 | 0 | 88 | 133 | 10 | 55 | 6.68e-12 | 63.9 |
| Msa0569940 | AT3G18100.4 | 31.757 | 148 | 87 | 4 | 12 | 159 | 383 | 516 | 7.00e-12 | 66.6 |
| Msa0569940 | AT3G18100.3 | 31.757 | 148 | 87 | 4 | 12 | 159 | 496 | 629 | 7.61e-12 | 66.6 |
| Msa0569940 | AT3G18100.2 | 31.973 | 147 | 86 | 4 | 12 | 158 | 331 | 463 | 9.63e-12 | 66.2 |
Find 85 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGGTCTTAACCAATATTT+TGG | 0.112249 | 4_1:+71981198 | Msa0569940:three_prime_UTR |
| CTTTGTCGTCAAATATCTTT+AGG | 0.182062 | 4_1:+71980753 | Msa0569940:CDS |
| GATCTCATTGTCTGTTCTTC+CGG | 0.221330 | 4_1:-71980265 | None:intergenic |
| TTAGGCTTAATCTTATCTTT+TGG | 0.256931 | 4_1:+71980976 | Msa0569940:three_prime_UTR |
| ATCTCATTGTCTGTTCTTCC+GGG | 0.278170 | 4_1:-71980264 | None:intergenic |
| AAATTTATAGCCCAAAATAT+TGG | 0.315592 | 4_1:-71981209 | None:intergenic |
| TAATATATACCTGCGGCTTT+AGG | 0.316628 | 4_1:-71979777 | None:intergenic |
| AATCAACTTGGAACTTTCAT+TGG | 0.322311 | 4_1:+71980686 | Msa0569940:CDS |
| GTTGTTTGATATAGTTAATA+AGG | 0.322850 | 4_1:-71979728 | None:intergenic |
| TTGAGTGGCTGATGTGTTGT+AGG | 0.350899 | 4_1:-71980342 | None:intergenic |
| AACAACAAGGTGAAGGTTGC+TGG | 0.363863 | 4_1:+71979745 | Msa0569940:CDS |
| AATGAAAGTTCCAAGTTGAT+TGG | 0.369039 | 4_1:-71980684 | None:intergenic |
| TTTGTCGTCAAATATCTTTA+GGG | 0.370282 | 4_1:+71980754 | Msa0569940:CDS |
| GGCGCCGCTGCCGCTTCAGC+CGG | 0.372168 | 4_1:+71980375 | Msa0569940:CDS |
| ACAATGAGATCAAGAACTAT+TGG | 0.386834 | 4_1:+71980277 | Msa0569940:CDS |
| AAGGCGTTCATCTTCTTCCT+TGG | 0.409969 | 4_1:-71979709 | None:intergenic |
| GGCTGAAGCGGCAGCGGCGC+CGG | 0.415460 | 4_1:-71980373 | None:intergenic |
| GTATGTGCTAATTGCTATGC+TGG | 0.434434 | 4_1:+71981162 | Msa0569940:three_prime_UTR |
| AAGTTTCCACGTTTAAGATC+AGG | 0.434602 | 4_1:-71979962 | None:intergenic |
| AGAAGCTGCTTCTCCTTCAA+TGG | 0.441772 | 4_1:+71980425 | Msa0569940:CDS |
| AGTACTGCTCTCGTTGGTTG+AGG | 0.444995 | 4_1:-71980484 | None:intergenic |
| TATTGCAGCAACAAGGTTGT+TGG | 0.450474 | 4_1:-71980791 | None:intergenic |
| TTCCCGACGCCGGTGGTAGC+AGG | 0.460111 | 4_1:-71980867 | None:intergenic |
| TCTTAATCTTGTTGTGGTGG+TGG | 0.469641 | 4_1:-71980521 | None:intergenic |
| GTTGCAACTGATTCTGTCCA+TGG | 0.469860 | 4_1:+71980594 | Msa0569940:CDS |
| ACGCCGGTGGTAGCAGGTGG+TGG | 0.472661 | 4_1:-71980861 | None:intergenic |
| CAAATATCTTTAGGGTTACA+TGG | 0.477003 | 4_1:+71980762 | Msa0569940:CDS |
| GCTACCACCGGCGTCGGGAA+TGG | 0.480018 | 4_1:+71980870 | Msa0569940:CDS |
| TTATTATTAACAACCATTGA+AGG | 0.483862 | 4_1:-71980438 | None:intergenic |
| AGCGGCAGCGGCGCCGGAGA+GGG | 0.484893 | 4_1:-71980367 | None:intergenic |
| CACCTGCTACCACCGGCGTC+GGG | 0.491522 | 4_1:+71980865 | Msa0569940:CDS |
| TCAGTAATTTCAGTGGCTCT+CGG | 0.500245 | 4_1:+71980559 | Msa0569940:CDS |
| TGCAGAGGTGGTTGTTGCTG+AGG | 0.503317 | 4_1:-71980403 | None:intergenic |
| CTCTCTCTCTCAACAACCAT+GGG | 0.511071 | 4_1:+71979639 | Msa0569940:exon |
| AGTACCGGCTGAAGCGGCAG+CGG | 0.515809 | 4_1:-71980379 | None:intergenic |
| CACTCTTAATCTTGTTGTGG+TGG | 0.527882 | 4_1:-71980524 | None:intergenic |
| CAGCCACTCAAAACCCTCTC+CGG | 0.529029 | 4_1:+71980354 | Msa0569940:CDS |
| AGTTCCAAGTTGATTGGAGG+AGG | 0.529728 | 4_1:-71980678 | None:intergenic |
| GAAAGTTCCAAGTTGATTGG+AGG | 0.531148 | 4_1:-71980681 | None:intergenic |
| TGAGGGTACTACAGGTAATA+CGG | 0.532096 | 4_1:-71980466 | None:intergenic |
| AGAAGCAGCTTCTGCAGAGG+TGG | 0.535240 | 4_1:-71980415 | None:intergenic |
| TATCATTAGCCTCCACGCTA+TGG | 0.539507 | 4_1:+71980006 | Msa0569940:CDS |
| GTACTGCTCTCGTTGGTTGA+GGG | 0.539997 | 4_1:-71980483 | None:intergenic |
| CAATCAAAACTTGACAATCC+CGG | 0.540131 | 4_1:-71980913 | None:intergenic |
| TCGTTGGTTGAGGGTACTAC+AGG | 0.542515 | 4_1:-71980474 | None:intergenic |
| AACACAGGCTTGGCGAGATG+TGG | 0.548320 | 4_1:+71979902 | Msa0569940:intron |
| AAGCGGCAGCGGCGCCGGAG+AGG | 0.551698 | 4_1:-71980368 | None:intergenic |
| AACACACAAACAAAGGTGCT+TGG | 0.551791 | 4_1:+71979685 | Msa0569940:CDS |
| CGTTCTCTTCCTAAAGCCGC+AGG | 0.552268 | 4_1:+71979768 | Msa0569940:CDS |
| ATTAGCCTCCACGCTATGGT+TGG | 0.553340 | 4_1:+71980010 | Msa0569940:CDS |
| CTGTGGCTGTTGAGAGGGAG+AGG | 0.555159 | 4_1:-71980715 | None:intergenic |
| CCACCTGCTACCACCGGCGT+CGG | 0.562507 | 4_1:+71980864 | Msa0569940:CDS |
| AAACTTGACAATCCCGGCCC+CGG | 0.577725 | 4_1:-71980907 | None:intergenic |
| TGAGGAAGTACCGGCTGAAG+CGG | 0.577777 | 4_1:-71980385 | None:intergenic |
| ACTCACTCTTAATCTTGTTG+TGG | 0.587928 | 4_1:-71980527 | None:intergenic |
| AAACAAAGGTGCTTGGTCCA+AGG | 0.588189 | 4_1:+71979692 | Msa0569940:CDS |
| TTATCCTCCTCCAATCAACT+TGG | 0.588353 | 4_1:+71980674 | Msa0569940:CDS |
| CAGTTATTCAGTAATTTCAG+TGG | 0.590300 | 4_1:+71980552 | Msa0569940:CDS |
| GCTCCACCACCTGCTACCAC+CGG | 0.597086 | 4_1:+71980858 | Msa0569940:CDS |
| CTCAGACCTGATCTTAAACG+TGG | 0.598711 | 4_1:+71979956 | Msa0569940:CDS |
| AAACGCAAACTCTATAGCCG+TGG | 0.599125 | 4_1:+71980312 | Msa0569940:CDS |
| GAAGTTGAAACACCAACGAT+AGG | 0.603237 | 4_1:-71980822 | None:intergenic |
| GGTTGTTGCTGAGGAAGTAC+CGG | 0.604216 | 4_1:-71980394 | None:intergenic |
| GTTACCAACGTCAACGACAA+AGG | 0.612745 | 4_1:+71981065 | Msa0569940:three_prime_UTR |
| AGGAGAAGCAGCTTCTGCAG+AGG | 0.621236 | 4_1:-71980418 | None:intergenic |
| ATGGTATTATTGCAGCAACA+AGG | 0.622111 | 4_1:-71980798 | None:intergenic |
| ACTTGTTTCCAACCATAGCG+TGG | 0.623181 | 4_1:-71980018 | None:intergenic |
| TATATCAAACAACAAGGTGA+AGG | 0.624328 | 4_1:+71979738 | Msa0569940:CDS |
| TAGCAGTGGTGTTACCGTTG+AGG | 0.625555 | 4_1:+71980644 | Msa0569940:CDS |
| CCGACGCCGGTGGTAGCAGG+TGG | 0.625901 | 4_1:-71980864 | None:intergenic |
| GCTACTAGTACTGCTCTCGT+TGG | 0.626573 | 4_1:-71980490 | None:intergenic |
| CTGTCCTTTGTCGTTGACGT+TGG | 0.628310 | 4_1:-71981069 | None:intergenic |
| TCAGTTTCAAACAGTAGCAG+TGG | 0.628636 | 4_1:+71980630 | Msa0569940:CDS |
| AATAATACCATGCCTATCGT+TGG | 0.630120 | 4_1:+71980810 | Msa0569940:CDS |
| ACGTGGAAACTTCACTCATG+AGG | 0.636253 | 4_1:+71979973 | Msa0569940:CDS |
| AGGATAAGCTATATCCTCAA+CGG | 0.643736 | 4_1:-71980658 | None:intergenic |
| CTGATTCTTCAACACCACCA+TGG | 0.645930 | 4_1:-71980611 | None:intergenic |
| AAAACCATTCCCGACGCCGG+TGG | 0.648900 | 4_1:-71980874 | None:intergenic |
| GTGTTGTAGGATCAATTCCA+CGG | 0.654495 | 4_1:-71980329 | None:intergenic |
| TGAAACACCAACGATAGGCA+TGG | 0.666214 | 4_1:-71980817 | None:intergenic |
| ACAGCAAGGAGATCTACCCA+TGG | 0.704613 | 4_1:-71979655 | None:intergenic |
| GCAACTGATTCTGTCCATGG+TGG | 0.713175 | 4_1:+71980597 | Msa0569940:CDS |
| ATTAACTATATCAAACAACA+AGG | 0.716458 | 4_1:+71979732 | Msa0569940:CDS |
| TGTTTCCAACCATAGCGTGG+AGG | 0.719128 | 4_1:-71980015 | None:intergenic |
| GCTGGTTGACTGTTGAACAG+AGG | 0.731993 | 4_1:+71981180 | Msa0569940:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATTTAATATATACCTG+CGG | - | chr4_1:71979787-71979806 | None:intergenic | 15.0% |
| !! | AAAAATAAATAAACGGATAT+GGG | - | chr4_1:71979854-71979873 | None:intergenic | 15.0% |
| !!! | TTTGATAGAATATGATTTTT+GGG | - | chr4_1:71980108-71980127 | None:intergenic | 15.0% |
| !!! | ATTTGATAGAATATGATTTT+TGG | - | chr4_1:71980109-71980128 | None:intergenic | 15.0% |
| !! | ATATATTTAATATATACCTG+CGG | - | chr4_1:71979787-71979806 | None:intergenic | 15.0% |
| !! | AAAAATAAATAAACGGATAT+GGG | - | chr4_1:71979854-71979873 | None:intergenic | 15.0% |
| !!! | TTTGATAGAATATGATTTTT+GGG | - | chr4_1:71980108-71980127 | None:intergenic | 15.0% |
| !!! | ATTTGATAGAATATGATTTT+TGG | - | chr4_1:71980109-71980128 | None:intergenic | 15.0% |
| !! | GTTGTTTGATATAGTTAATA+AGG | - | chr4_1:71979731-71979750 | None:intergenic | 20.0% |
| !! | ATTAACTATATCAAACAACA+AGG | + | chr4_1:71979732-71979751 | Msa0569940:CDS | 20.0% |
| !! | GAAAAATAAATAAACGGATA+TGG | - | chr4_1:71979855-71979874 | None:intergenic | 20.0% |
| !! | TTATTATTAACAACCATTGA+AGG | - | chr4_1:71980441-71980460 | None:intergenic | 20.0% |
| !!! | AATGGTTTTTTCAAATTTTC+CGG | + | chr4_1:71980888-71980907 | Msa0569940:CDS | 20.0% |
| !!! | TTTTGTTGTAGAAGTAATTT+AGG | + | chr4_1:71980958-71980977 | Msa0569940:three_prime_UTR | 20.0% |
| !! | AAATTTATAGCCCAAAATAT+TGG | - | chr4_1:71981212-71981231 | None:intergenic | 20.0% |
| !!! | AATATTTTGGGCTATAAATT+TGG | + | chr4_1:71981211-71981230 | Msa0569940:three_prime_UTR | 20.0% |
| !!! | ATATTTTGGGCTATAAATTT+GGG | + | chr4_1:71981212-71981231 | Msa0569940:three_prime_UTR | 20.0% |
| !! | GTTGTTTGATATAGTTAATA+AGG | - | chr4_1:71979731-71979750 | None:intergenic | 20.0% |
| !! | ATTAACTATATCAAACAACA+AGG | + | chr4_1:71979732-71979751 | Msa0569940:CDS | 20.0% |
| !! | GAAAAATAAATAAACGGATA+TGG | - | chr4_1:71979855-71979874 | None:intergenic | 20.0% |
| !! | TTATTATTAACAACCATTGA+AGG | - | chr4_1:71980441-71980460 | None:intergenic | 20.0% |
| !!! | AATGGTTTTTTCAAATTTTC+CGG | + | chr4_1:71980888-71980907 | Msa0569940:CDS | 20.0% |
| !!! | TTTTGTTGTAGAAGTAATTT+AGG | + | chr4_1:71980958-71980977 | Msa0569940:three_prime_UTR | 20.0% |
| !! | AAATTTATAGCCCAAAATAT+TGG | - | chr4_1:71981212-71981231 | None:intergenic | 20.0% |
| !!! | AATATTTTGGGCTATAAATT+TGG | + | chr4_1:71981211-71981230 | Msa0569940:three_prime_UTR | 20.0% |
| !!! | ATATTTTGGGCTATAAATTT+GGG | + | chr4_1:71981212-71981231 | Msa0569940:three_prime_UTR | 20.0% |
| ! | ATGATTACAGAATTACATGA+AGG | - | chr4_1:71980181-71980200 | None:intergenic | 25.0% |
| !!! | GATTATGTTTTGTTTTCAGA+TGG | + | chr4_1:71980220-71980239 | Msa0569940:intron | 25.0% |
| ! | TTTGTCGTCAAATATCTTTA+GGG | + | chr4_1:71980754-71980773 | Msa0569940:CDS | 25.0% |
| !!! | ATGGTTTTTTCAAATTTTCC+GGG | + | chr4_1:71980889-71980908 | Msa0569940:CDS | 25.0% |
| !!! | TCAAGTTTTGATTGGAAATT+TGG | + | chr4_1:71980922-71980941 | Msa0569940:exon | 25.0% |
| !! | TTAGGCTTAATCTTATCTTT+TGG | + | chr4_1:71980976-71980995 | Msa0569940:three_prime_UTR | 25.0% |
| !! | TAGGCTTAATCTTATCTTTT+GGG | + | chr4_1:71980977-71980996 | Msa0569940:three_prime_UTR | 25.0% |
| !! | TCGAAACTTTTCGAAATTTT+TGG | + | chr4_1:71981112-71981131 | Msa0569940:three_prime_UTR | 25.0% |
| ! | ATGATTACAGAATTACATGA+AGG | - | chr4_1:71980181-71980200 | None:intergenic | 25.0% |
| !!! | GATTATGTTTTGTTTTCAGA+TGG | + | chr4_1:71980220-71980239 | Msa0569940:intron | 25.0% |
| ! | TTTGTCGTCAAATATCTTTA+GGG | + | chr4_1:71980754-71980773 | Msa0569940:CDS | 25.0% |
| !!! | ATGGTTTTTTCAAATTTTCC+GGG | + | chr4_1:71980889-71980908 | Msa0569940:CDS | 25.0% |
| !!! | TCAAGTTTTGATTGGAAATT+TGG | + | chr4_1:71980922-71980941 | Msa0569940:exon | 25.0% |
| !! | TTAGGCTTAATCTTATCTTT+TGG | + | chr4_1:71980976-71980995 | Msa0569940:three_prime_UTR | 25.0% |
| !! | TAGGCTTAATCTTATCTTTT+GGG | + | chr4_1:71980977-71980996 | Msa0569940:three_prime_UTR | 25.0% |
| !! | TCGAAACTTTTCGAAATTTT+TGG | + | chr4_1:71981112-71981131 | Msa0569940:three_prime_UTR | 25.0% |
| GAAAAACAACACACAAACAA+AGG | + | chr4_1:71979678-71979697 | Msa0569940:CDS | 30.0% | |
| TATATCAAACAACAAGGTGA+AGG | + | chr4_1:71979738-71979757 | Msa0569940:CDS | 30.0% | |
| ATAAATAAACGGATATGGGT+GGG | - | chr4_1:71979850-71979869 | None:intergenic | 30.0% | |
| AATAAATAAACGGATATGGG+TGG | - | chr4_1:71979851-71979870 | None:intergenic | 30.0% | |
| ACAATGAGATCAAGAACTAT+TGG | + | chr4_1:71980277-71980296 | Msa0569940:CDS | 30.0% | |
| CAGTTATTCAGTAATTTCAG+TGG | + | chr4_1:71980552-71980571 | Msa0569940:CDS | 30.0% | |
| !! | AATGAAAGTTCCAAGTTGAT+TGG | - | chr4_1:71980687-71980706 | None:intergenic | 30.0% |
| AATCAACTTGGAACTTTCAT+TGG | + | chr4_1:71980686-71980705 | Msa0569940:CDS | 30.0% | |
| CTTTGTCGTCAAATATCTTT+AGG | + | chr4_1:71980753-71980772 | Msa0569940:CDS | 30.0% | |
| !! | CAAATATCTTTAGGGTTACA+TGG | + | chr4_1:71980762-71980781 | Msa0569940:CDS | 30.0% |
| !!! | TGGTTTTTTCAAATTTTCCG+GGG | + | chr4_1:71980890-71980909 | Msa0569940:CDS | 30.0% |
| ! | AGGCTTAATCTTATCTTTTG+GGG | + | chr4_1:71980978-71980997 | Msa0569940:three_prime_UTR | 30.0% |
| ! | AGAGGTCTTAACCAATATTT+TGG | + | chr4_1:71981198-71981217 | Msa0569940:three_prime_UTR | 30.0% |
| ! | GAGGTCTTAACCAATATTTT+GGG | + | chr4_1:71981199-71981218 | Msa0569940:three_prime_UTR | 30.0% |
| GAAAAACAACACACAAACAA+AGG | + | chr4_1:71979678-71979697 | Msa0569940:CDS | 30.0% | |
| TATATCAAACAACAAGGTGA+AGG | + | chr4_1:71979738-71979757 | Msa0569940:CDS | 30.0% | |
| ATAAATAAACGGATATGGGT+GGG | - | chr4_1:71979850-71979869 | None:intergenic | 30.0% | |
| AATAAATAAACGGATATGGG+TGG | - | chr4_1:71979851-71979870 | None:intergenic | 30.0% | |
| ACAATGAGATCAAGAACTAT+TGG | + | chr4_1:71980277-71980296 | Msa0569940:CDS | 30.0% | |
| CAGTTATTCAGTAATTTCAG+TGG | + | chr4_1:71980552-71980571 | Msa0569940:CDS | 30.0% | |
| !! | AATGAAAGTTCCAAGTTGAT+TGG | - | chr4_1:71980687-71980706 | None:intergenic | 30.0% |
| AATCAACTTGGAACTTTCAT+TGG | + | chr4_1:71980686-71980705 | Msa0569940:CDS | 30.0% | |
| CTTTGTCGTCAAATATCTTT+AGG | + | chr4_1:71980753-71980772 | Msa0569940:CDS | 30.0% | |
| !! | CAAATATCTTTAGGGTTACA+TGG | + | chr4_1:71980762-71980781 | Msa0569940:CDS | 30.0% |
| !!! | TGGTTTTTTCAAATTTTCCG+GGG | + | chr4_1:71980890-71980909 | Msa0569940:CDS | 30.0% |
| ! | AGGCTTAATCTTATCTTTTG+GGG | + | chr4_1:71980978-71980997 | Msa0569940:three_prime_UTR | 30.0% |
| ! | AGAGGTCTTAACCAATATTT+TGG | + | chr4_1:71981198-71981217 | Msa0569940:three_prime_UTR | 30.0% |
| ! | GAGGTCTTAACCAATATTTT+GGG | + | chr4_1:71981199-71981218 | Msa0569940:three_prime_UTR | 30.0% |
| TAATATATACCTGCGGCTTT+AGG | - | chr4_1:71979780-71979799 | None:intergenic | 35.0% | |
| ATGCATCTTTACTACAACAC+AGG | + | chr4_1:71979887-71979906 | Msa0569940:intron | 35.0% | |
| GAAAAAGCTGTAGATTGAGA+TGG | + | chr4_1:71979924-71979943 | Msa0569940:CDS | 35.0% | |
| ! | AAGTTTCCACGTTTAAGATC+AGG | - | chr4_1:71979965-71979984 | None:intergenic | 35.0% |
| ACTCACTCTTAATCTTGTTG+TGG | - | chr4_1:71980530-71980549 | None:intergenic | 35.0% | |
| AGGATAAGCTATATCCTCAA+CGG | - | chr4_1:71980661-71980680 | None:intergenic | 35.0% | |
| ATGGTATTATTGCAGCAACA+AGG | - | chr4_1:71980801-71980820 | None:intergenic | 35.0% | |
| AATAATACCATGCCTATCGT+TGG | + | chr4_1:71980810-71980829 | Msa0569940:CDS | 35.0% | |
| CAATCAAAACTTGACAATCC+CGG | - | chr4_1:71980916-71980935 | None:intergenic | 35.0% | |
| TAATATATACCTGCGGCTTT+AGG | - | chr4_1:71979780-71979799 | None:intergenic | 35.0% | |
| ATGCATCTTTACTACAACAC+AGG | + | chr4_1:71979887-71979906 | Msa0569940:intron | 35.0% | |
| GAAAAAGCTGTAGATTGAGA+TGG | + | chr4_1:71979924-71979943 | Msa0569940:CDS | 35.0% | |
| ! | AAGTTTCCACGTTTAAGATC+AGG | - | chr4_1:71979965-71979984 | None:intergenic | 35.0% |
| ACTCACTCTTAATCTTGTTG+TGG | - | chr4_1:71980530-71980549 | None:intergenic | 35.0% | |
| AGGATAAGCTATATCCTCAA+CGG | - | chr4_1:71980661-71980680 | None:intergenic | 35.0% | |
| ATGGTATTATTGCAGCAACA+AGG | - | chr4_1:71980801-71980820 | None:intergenic | 35.0% | |
| AATAATACCATGCCTATCGT+TGG | + | chr4_1:71980810-71980829 | Msa0569940:CDS | 35.0% | |
| CAATCAAAACTTGACAATCC+CGG | - | chr4_1:71980916-71980935 | None:intergenic | 35.0% | |
| !!! | GTGTGTTGTTTTTCACAGCA+AGG | - | chr4_1:71979672-71979691 | None:intergenic | 40.0% |
| !! | AACACACAAACAAAGGTGCT+TGG | + | chr4_1:71979685-71979704 | Msa0569940:CDS | 40.0% |
| TCTTTACTACAACACAGGCT+TGG | + | chr4_1:71979892-71979911 | Msa0569940:intron | 40.0% | |
| CAGATTGCTCAAAAATTGCC+CGG | + | chr4_1:71980246-71980265 | Msa0569940:CDS | 40.0% | |
| ATCTCATTGTCTGTTCTTCC+GGG | - | chr4_1:71980267-71980286 | None:intergenic | 40.0% | |
| GATCTCATTGTCTGTTCTTC+CGG | - | chr4_1:71980268-71980287 | None:intergenic | 40.0% | |
| GTGTTGTAGGATCAATTCCA+CGG | - | chr4_1:71980332-71980351 | None:intergenic | 40.0% | |
| !! | TGAGGGTACTACAGGTAATA+CGG | - | chr4_1:71980469-71980488 | None:intergenic | 40.0% |
| ! | TCTTAATCTTGTTGTGGTGG+TGG | - | chr4_1:71980524-71980543 | None:intergenic | 40.0% |
| ! | CACTCTTAATCTTGTTGTGG+TGG | - | chr4_1:71980527-71980546 | None:intergenic | 40.0% |
| TCAGTAATTTCAGTGGCTCT+CGG | + | chr4_1:71980559-71980578 | Msa0569940:CDS | 40.0% | |
| TCAGTTTCAAACAGTAGCAG+TGG | + | chr4_1:71980630-71980649 | Msa0569940:CDS | 40.0% | |
| TTATCCTCCTCCAATCAACT+TGG | + | chr4_1:71980674-71980693 | Msa0569940:CDS | 40.0% | |
| !! | GAAAGTTCCAAGTTGATTGG+AGG | - | chr4_1:71980684-71980703 | None:intergenic | 40.0% |
| ! | AGACACAAAGCTTTTTGCTG+TGG | - | chr4_1:71980735-71980754 | None:intergenic | 40.0% |
| TATTGCAGCAACAAGGTTGT+TGG | - | chr4_1:71980794-71980813 | None:intergenic | 40.0% | |
| GAAGTTGAAACACCAACGAT+AGG | - | chr4_1:71980825-71980844 | None:intergenic | 40.0% | |
| !! | TTTTTCAAATTTTCCGGGGC+CGG | + | chr4_1:71980894-71980913 | Msa0569940:CDS | 40.0% |
| !! | CGGGATTGTCAAGTTTTGAT+TGG | + | chr4_1:71980914-71980933 | Msa0569940:exon | 40.0% |
| GTATGTGCTAATTGCTATGC+TGG | + | chr4_1:71981162-71981181 | Msa0569940:three_prime_UTR | 40.0% | |
| !!! | GTGTGTTGTTTTTCACAGCA+AGG | - | chr4_1:71979672-71979691 | None:intergenic | 40.0% |
| !! | AACACACAAACAAAGGTGCT+TGG | + | chr4_1:71979685-71979704 | Msa0569940:CDS | 40.0% |
| TCTTTACTACAACACAGGCT+TGG | + | chr4_1:71979892-71979911 | Msa0569940:intron | 40.0% | |
| CAGATTGCTCAAAAATTGCC+CGG | + | chr4_1:71980246-71980265 | Msa0569940:CDS | 40.0% | |
| ATCTCATTGTCTGTTCTTCC+GGG | - | chr4_1:71980267-71980286 | None:intergenic | 40.0% | |
| GATCTCATTGTCTGTTCTTC+CGG | - | chr4_1:71980268-71980287 | None:intergenic | 40.0% | |
| GTGTTGTAGGATCAATTCCA+CGG | - | chr4_1:71980332-71980351 | None:intergenic | 40.0% | |
| !! | TGAGGGTACTACAGGTAATA+CGG | - | chr4_1:71980469-71980488 | None:intergenic | 40.0% |
| ! | TCTTAATCTTGTTGTGGTGG+TGG | - | chr4_1:71980524-71980543 | None:intergenic | 40.0% |
| ! | CACTCTTAATCTTGTTGTGG+TGG | - | chr4_1:71980527-71980546 | None:intergenic | 40.0% |
| TCAGTAATTTCAGTGGCTCT+CGG | + | chr4_1:71980559-71980578 | Msa0569940:CDS | 40.0% | |
| TCAGTTTCAAACAGTAGCAG+TGG | + | chr4_1:71980630-71980649 | Msa0569940:CDS | 40.0% | |
| TTATCCTCCTCCAATCAACT+TGG | + | chr4_1:71980674-71980693 | Msa0569940:CDS | 40.0% | |
| !! | GAAAGTTCCAAGTTGATTGG+AGG | - | chr4_1:71980684-71980703 | None:intergenic | 40.0% |
| ! | AGACACAAAGCTTTTTGCTG+TGG | - | chr4_1:71980735-71980754 | None:intergenic | 40.0% |
| TATTGCAGCAACAAGGTTGT+TGG | - | chr4_1:71980794-71980813 | None:intergenic | 40.0% | |
| GAAGTTGAAACACCAACGAT+AGG | - | chr4_1:71980825-71980844 | None:intergenic | 40.0% | |
| !! | TTTTTCAAATTTTCCGGGGC+CGG | + | chr4_1:71980894-71980913 | Msa0569940:CDS | 40.0% |
| !! | CGGGATTGTCAAGTTTTGAT+TGG | + | chr4_1:71980914-71980933 | Msa0569940:exon | 40.0% |
| GTATGTGCTAATTGCTATGC+TGG | + | chr4_1:71981162-71981181 | Msa0569940:three_prime_UTR | 40.0% | |
| TCTCTCTCTCTCAACAACCA+TGG | + | chr4_1:71979638-71979657 | Msa0569940:exon | 45.0% | |
| CTCTCTCTCTCAACAACCAT+GGG | + | chr4_1:71979639-71979658 | Msa0569940:exon | 45.0% | |
| !! | AAACAAAGGTGCTTGGTCCA+AGG | + | chr4_1:71979692-71979711 | Msa0569940:CDS | 45.0% |
| ! | AAGGCGTTCATCTTCTTCCT+TGG | - | chr4_1:71979712-71979731 | None:intergenic | 45.0% |
| AACAACAAGGTGAAGGTTGC+TGG | + | chr4_1:71979745-71979764 | Msa0569940:CDS | 45.0% | |
| CTCAGACCTGATCTTAAACG+TGG | + | chr4_1:71979956-71979975 | Msa0569940:CDS | 45.0% | |
| ACGTGGAAACTTCACTCATG+AGG | + | chr4_1:71979973-71979992 | Msa0569940:CDS | 45.0% | |
| ! | TATCATTAGCCTCCACGCTA+TGG | + | chr4_1:71980006-71980025 | Msa0569940:CDS | 45.0% |
| ACTTGTTTCCAACCATAGCG+TGG | - | chr4_1:71980021-71980040 | None:intergenic | 45.0% | |
| AAACGCAAACTCTATAGCCG+TGG | + | chr4_1:71980312-71980331 | Msa0569940:CDS | 45.0% | |
| TTGAGTGGCTGATGTGTTGT+AGG | - | chr4_1:71980345-71980364 | None:intergenic | 45.0% | |
| AGAAGCTGCTTCTCCTTCAA+TGG | + | chr4_1:71980425-71980444 | Msa0569940:CDS | 45.0% | |
| ! | GTTGCAACTGATTCTGTCCA+TGG | + | chr4_1:71980594-71980613 | Msa0569940:CDS | 45.0% |
| CTGATTCTTCAACACCACCA+TGG | - | chr4_1:71980614-71980633 | None:intergenic | 45.0% | |
| !! | AGTTCCAAGTTGATTGGAGG+AGG | - | chr4_1:71980681-71980700 | None:intergenic | 45.0% |
| !! | TTTTGCTGTGGCTGTTGAGA+GGG | - | chr4_1:71980723-71980742 | None:intergenic | 45.0% |
| !! | TTTTTGCTGTGGCTGTTGAG+AGG | - | chr4_1:71980724-71980743 | None:intergenic | 45.0% |
| TGAAACACCAACGATAGGCA+TGG | - | chr4_1:71980820-71980839 | None:intergenic | 45.0% | |
| ! | TTTTCAAATTTTCCGGGGCC+GGG | + | chr4_1:71980895-71980914 | Msa0569940:CDS | 45.0% |
| GTTACCAACGTCAACGACAA+AGG | + | chr4_1:71981065-71981084 | Msa0569940:three_prime_UTR | 45.0% | |
| TCTCTCTCTCTCAACAACCA+TGG | + | chr4_1:71979638-71979657 | Msa0569940:exon | 45.0% | |
| CTCTCTCTCTCAACAACCAT+GGG | + | chr4_1:71979639-71979658 | Msa0569940:exon | 45.0% | |
| !! | AAACAAAGGTGCTTGGTCCA+AGG | + | chr4_1:71979692-71979711 | Msa0569940:CDS | 45.0% |
| ! | AAGGCGTTCATCTTCTTCCT+TGG | - | chr4_1:71979712-71979731 | None:intergenic | 45.0% |
| AACAACAAGGTGAAGGTTGC+TGG | + | chr4_1:71979745-71979764 | Msa0569940:CDS | 45.0% | |
| CTCAGACCTGATCTTAAACG+TGG | + | chr4_1:71979956-71979975 | Msa0569940:CDS | 45.0% | |
| ACGTGGAAACTTCACTCATG+AGG | + | chr4_1:71979973-71979992 | Msa0569940:CDS | 45.0% | |
| ! | TATCATTAGCCTCCACGCTA+TGG | + | chr4_1:71980006-71980025 | Msa0569940:CDS | 45.0% |
| ACTTGTTTCCAACCATAGCG+TGG | - | chr4_1:71980021-71980040 | None:intergenic | 45.0% | |
| AAACGCAAACTCTATAGCCG+TGG | + | chr4_1:71980312-71980331 | Msa0569940:CDS | 45.0% | |
| TTGAGTGGCTGATGTGTTGT+AGG | - | chr4_1:71980345-71980364 | None:intergenic | 45.0% | |
| AGAAGCTGCTTCTCCTTCAA+TGG | + | chr4_1:71980425-71980444 | Msa0569940:CDS | 45.0% | |
| ! | GTTGCAACTGATTCTGTCCA+TGG | + | chr4_1:71980594-71980613 | Msa0569940:CDS | 45.0% |
| CTGATTCTTCAACACCACCA+TGG | - | chr4_1:71980614-71980633 | None:intergenic | 45.0% | |
| !! | AGTTCCAAGTTGATTGGAGG+AGG | - | chr4_1:71980681-71980700 | None:intergenic | 45.0% |
| !! | TTTTGCTGTGGCTGTTGAGA+GGG | - | chr4_1:71980723-71980742 | None:intergenic | 45.0% |
| !! | TTTTTGCTGTGGCTGTTGAG+AGG | - | chr4_1:71980724-71980743 | None:intergenic | 45.0% |
| TGAAACACCAACGATAGGCA+TGG | - | chr4_1:71980820-71980839 | None:intergenic | 45.0% | |
| ! | TTTTCAAATTTTCCGGGGCC+GGG | + | chr4_1:71980895-71980914 | Msa0569940:CDS | 45.0% |
| GTTACCAACGTCAACGACAA+AGG | + | chr4_1:71981065-71981084 | Msa0569940:three_prime_UTR | 45.0% | |
| !! | AATTAAGAAAAATAAATAAA+CGG | - | chr4_1:71979861-71979880 | None:intergenic | 5.0% |
| !! | AATTAAGAAAAATAAATAAA+CGG | - | chr4_1:71979861-71979880 | None:intergenic | 5.0% |
| ACAGCAAGGAGATCTACCCA+TGG | - | chr4_1:71979658-71979677 | None:intergenic | 50.0% | |
| ! | ATTAGCCTCCACGCTATGGT+TGG | + | chr4_1:71980010-71980029 | Msa0569940:CDS | 50.0% |
| TGTTTCCAACCATAGCGTGG+AGG | - | chr4_1:71980018-71980037 | None:intergenic | 50.0% | |
| ! | GGTTGTTGCTGAGGAAGTAC+CGG | - | chr4_1:71980397-71980416 | None:intergenic | 50.0% |
| !! | TCGTTGGTTGAGGGTACTAC+AGG | - | chr4_1:71980477-71980496 | None:intergenic | 50.0% |
| ! | GTACTGCTCTCGTTGGTTGA+GGG | - | chr4_1:71980486-71980505 | None:intergenic | 50.0% |
| ! | AGTACTGCTCTCGTTGGTTG+AGG | - | chr4_1:71980487-71980506 | None:intergenic | 50.0% |
| GCTACTAGTACTGCTCTCGT+TGG | - | chr4_1:71980493-71980512 | None:intergenic | 50.0% | |
| ! | GCAACTGATTCTGTCCATGG+TGG | + | chr4_1:71980597-71980616 | Msa0569940:CDS | 50.0% |
| !! | TAGCAGTGGTGTTACCGTTG+AGG | + | chr4_1:71980644-71980663 | Msa0569940:CDS | 50.0% |
| GAAAAAACCATTCCCGACGC+CGG | - | chr4_1:71980880-71980899 | None:intergenic | 50.0% | |
| CTGTCCTTTGTCGTTGACGT+TGG | - | chr4_1:71981072-71981091 | None:intergenic | 50.0% | |
| GCTGGTTGACTGTTGAACAG+AGG | + | chr4_1:71981180-71981199 | Msa0569940:three_prime_UTR | 50.0% | |
| GTTGAGAGAGAGAGAGAGAG+AGG | - | chr4_1:71979633-71979652 | None:intergenic | 50.0% | |
| ACAGCAAGGAGATCTACCCA+TGG | - | chr4_1:71979658-71979677 | None:intergenic | 50.0% | |
| ! | ATTAGCCTCCACGCTATGGT+TGG | + | chr4_1:71980010-71980029 | Msa0569940:CDS | 50.0% |
| TGTTTCCAACCATAGCGTGG+AGG | - | chr4_1:71980018-71980037 | None:intergenic | 50.0% | |
| ! | GGTTGTTGCTGAGGAAGTAC+CGG | - | chr4_1:71980397-71980416 | None:intergenic | 50.0% |
| !! | TCGTTGGTTGAGGGTACTAC+AGG | - | chr4_1:71980477-71980496 | None:intergenic | 50.0% |
| ! | GTACTGCTCTCGTTGGTTGA+GGG | - | chr4_1:71980486-71980505 | None:intergenic | 50.0% |
| ! | AGTACTGCTCTCGTTGGTTG+AGG | - | chr4_1:71980487-71980506 | None:intergenic | 50.0% |
| GCTACTAGTACTGCTCTCGT+TGG | - | chr4_1:71980493-71980512 | None:intergenic | 50.0% | |
| ! | GCAACTGATTCTGTCCATGG+TGG | + | chr4_1:71980597-71980616 | Msa0569940:CDS | 50.0% |
| !! | TAGCAGTGGTGTTACCGTTG+AGG | + | chr4_1:71980644-71980663 | Msa0569940:CDS | 50.0% |
| GAAAAAACCATTCCCGACGC+CGG | - | chr4_1:71980880-71980899 | None:intergenic | 50.0% | |
| CTGTCCTTTGTCGTTGACGT+TGG | - | chr4_1:71981072-71981091 | None:intergenic | 50.0% | |
| GCTGGTTGACTGTTGAACAG+AGG | + | chr4_1:71981180-71981199 | Msa0569940:three_prime_UTR | 50.0% | |
| CGTTCTCTTCCTAAAGCCGC+AGG | + | chr4_1:71979768-71979787 | Msa0569940:CDS | 55.0% | |
| AACACAGGCTTGGCGAGATG+TGG | + | chr4_1:71979902-71979921 | Msa0569940:intron | 55.0% | |
| CAGCCACTCAAAACCCTCTC+CGG | + | chr4_1:71980354-71980373 | Msa0569940:CDS | 55.0% | |
| !! | TGAGGAAGTACCGGCTGAAG+CGG | - | chr4_1:71980388-71980407 | None:intergenic | 55.0% |
| TGCAGAGGTGGTTGTTGCTG+AGG | - | chr4_1:71980406-71980425 | None:intergenic | 55.0% | |
| AGAAGCAGCTTCTGCAGAGG+TGG | - | chr4_1:71980418-71980437 | None:intergenic | 55.0% | |
| AGGAGAAGCAGCTTCTGCAG+AGG | - | chr4_1:71980421-71980440 | None:intergenic | 55.0% | |
| AAACTTGACAATCCCGGCCC+CGG | - | chr4_1:71980910-71980929 | None:intergenic | 55.0% | |
| CGTTCTCTTCCTAAAGCCGC+AGG | + | chr4_1:71979768-71979787 | Msa0569940:CDS | 55.0% | |
| AACACAGGCTTGGCGAGATG+TGG | + | chr4_1:71979902-71979921 | Msa0569940:intron | 55.0% | |
| CAGCCACTCAAAACCCTCTC+CGG | + | chr4_1:71980354-71980373 | Msa0569940:CDS | 55.0% | |
| !! | TGAGGAAGTACCGGCTGAAG+CGG | - | chr4_1:71980388-71980407 | None:intergenic | 55.0% |
| TGCAGAGGTGGTTGTTGCTG+AGG | - | chr4_1:71980406-71980425 | None:intergenic | 55.0% | |
| AGAAGCAGCTTCTGCAGAGG+TGG | - | chr4_1:71980418-71980437 | None:intergenic | 55.0% | |
| AGGAGAAGCAGCTTCTGCAG+AGG | - | chr4_1:71980421-71980440 | None:intergenic | 55.0% | |
| AAACTTGACAATCCCGGCCC+CGG | - | chr4_1:71980910-71980929 | None:intergenic | 55.0% | |
| CTGTGGCTGTTGAGAGGGAG+AGG | - | chr4_1:71980718-71980737 | None:intergenic | 60.0% | |
| AAAACCATTCCCGACGCCGG+TGG | - | chr4_1:71980877-71980896 | None:intergenic | 60.0% | |
| CTGTGGCTGTTGAGAGGGAG+AGG | - | chr4_1:71980718-71980737 | None:intergenic | 60.0% | |
| AAAACCATTCCCGACGCCGG+TGG | - | chr4_1:71980877-71980896 | None:intergenic | 60.0% | |
| !!! | GCGCCGGAGAGGGTTTTGAG+TGG | - | chr4_1:71980360-71980379 | None:intergenic | 65.0% |
| !! | AGTACCGGCTGAAGCGGCAG+CGG | - | chr4_1:71980382-71980401 | None:intergenic | 65.0% |
| GCTCCACCACCTGCTACCAC+CGG | + | chr4_1:71980858-71980877 | Msa0569940:CDS | 65.0% | |
| !!! | GCGCCGGAGAGGGTTTTGAG+TGG | - | chr4_1:71980360-71980379 | None:intergenic | 65.0% |
| !! | AGTACCGGCTGAAGCGGCAG+CGG | - | chr4_1:71980382-71980401 | None:intergenic | 65.0% |
| GCTCCACCACCTGCTACCAC+CGG | + | chr4_1:71980858-71980877 | Msa0569940:CDS | 65.0% | |
| ACGCCGGTGGTAGCAGGTGG+TGG | - | chr4_1:71980864-71980883 | None:intergenic | 70.0% | |
| CCACCTGCTACCACCGGCGT+CGG | + | chr4_1:71980864-71980883 | Msa0569940:CDS | 70.0% | |
| CACCTGCTACCACCGGCGTC+GGG | + | chr4_1:71980865-71980884 | Msa0569940:CDS | 70.0% | |
| TTCCCGACGCCGGTGGTAGC+AGG | - | chr4_1:71980870-71980889 | None:intergenic | 70.0% | |
| ! | GCTACCACCGGCGTCGGGAA+TGG | + | chr4_1:71980870-71980889 | Msa0569940:CDS | 70.0% |
| ACGCCGGTGGTAGCAGGTGG+TGG | - | chr4_1:71980864-71980883 | None:intergenic | 70.0% | |
| CCACCTGCTACCACCGGCGT+CGG | + | chr4_1:71980864-71980883 | Msa0569940:CDS | 70.0% | |
| CACCTGCTACCACCGGCGTC+GGG | + | chr4_1:71980865-71980884 | Msa0569940:CDS | 70.0% | |
| TTCCCGACGCCGGTGGTAGC+AGG | - | chr4_1:71980870-71980889 | None:intergenic | 70.0% | |
| ! | GCTACCACCGGCGTCGGGAA+TGG | + | chr4_1:71980870-71980889 | Msa0569940:CDS | 70.0% |
| CCGACGCCGGTGGTAGCAGG+TGG | - | chr4_1:71980867-71980886 | None:intergenic | 75.0% | |
| CCGACGCCGGTGGTAGCAGG+TGG | - | chr4_1:71980867-71980886 | None:intergenic | 75.0% | |
| !! | AGCGGCAGCGGCGCCGGAGA+GGG | - | chr4_1:71980370-71980389 | None:intergenic | 80.0% |
| !! | AAGCGGCAGCGGCGCCGGAG+AGG | - | chr4_1:71980371-71980390 | None:intergenic | 80.0% |
| ! | GGCTGAAGCGGCAGCGGCGC+CGG | - | chr4_1:71980376-71980395 | None:intergenic | 80.0% |
| !! | GGCGCCGCTGCCGCTTCAGC+CGG | + | chr4_1:71980375-71980394 | Msa0569940:CDS | 80.0% |
| !! | AGCGGCAGCGGCGCCGGAGA+GGG | - | chr4_1:71980370-71980389 | None:intergenic | 80.0% |
| !! | AAGCGGCAGCGGCGCCGGAG+AGG | - | chr4_1:71980371-71980390 | None:intergenic | 80.0% |
| ! | GGCTGAAGCGGCAGCGGCGC+CGG | - | chr4_1:71980376-71980395 | None:intergenic | 80.0% |
| !! | GGCGCCGCTGCCGCTTCAGC+CGG | + | chr4_1:71980375-71980394 | Msa0569940:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 71979631 | 71981256 | 71979631 | ID=Msa0569940;Name=Msa0569940 |
| chr4_1 | mRNA | 71979631 | 71981256 | 71979631 | ID=Msa0569940-mRNA-1;Parent=Msa0569940;Name=Msa0569940-mRNA-1;_AED=0.03;_eAED=0.03;_QI=26|1|1|1|1|1|3|324|318 |
| chr4_1 | exon | 71979631 | 71979789 | 71979631 | ID=Msa0569940-mRNA-1:exon:24481;Parent=Msa0569940-mRNA-1 |
| chr4_1 | exon | 71979909 | 71980038 | 71979909 | ID=Msa0569940-mRNA-1:exon:24482;Parent=Msa0569940-mRNA-1 |
| chr4_1 | exon | 71980239 | 71981256 | 71980239 | ID=Msa0569940-mRNA-1:exon:24483;Parent=Msa0569940-mRNA-1 |
| chr4_1 | five_prime_UTR | 71979631 | 71979656 | 71979631 | ID=Msa0569940-mRNA-1:five_prime_utr;Parent=Msa0569940-mRNA-1 |
| chr4_1 | CDS | 71979657 | 71979789 | 71979657 | ID=Msa0569940-mRNA-1:cds;Parent=Msa0569940-mRNA-1 |
| chr4_1 | CDS | 71979909 | 71980038 | 71979909 | ID=Msa0569940-mRNA-1:cds;Parent=Msa0569940-mRNA-1 |
| chr4_1 | CDS | 71980239 | 71980932 | 71980239 | ID=Msa0569940-mRNA-1:cds;Parent=Msa0569940-mRNA-1 |
| chr4_1 | three_prime_UTR | 71980933 | 71981256 | 71980933 | ID=Msa0569940-mRNA-1:three_prime_utr;Parent=Msa0569940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
