AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0570920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0570920 MtrunA17_Chr8g0385991 95.671 231 6 1 1 231 1 227 6.40e-166 456
Msa0570920 MtrunA17_Chr3g0131911 64.789 213 66 3 1 204 1 213 4.66e-93 273
Msa0570920 MtrunA17_Chr7g0214071 60.795 176 60 3 1 175 1 168 5.54e-74 225
Msa0570920 MtrunA17_Chr4g0042561 49.693 163 75 4 12 171 7 165 3.58e-51 167
Msa0570920 MtrunA17_Chr2g0318101 47.191 178 77 4 14 183 15 183 7.40e-51 169
Msa0570920 MtrunA17_Chr7g0263931 48.447 161 78 3 13 171 10 167 2.14e-50 167
Msa0570920 MtrunA17_Chr7g0252971 46.821 173 76 4 12 172 6 174 2.36e-49 164
Msa0570920 MtrunA17_Chr2g0326361 51.948 154 69 3 14 164 14 165 5.43e-49 163
Msa0570920 MtrunA17_Chr4g0047841 45.304 181 73 3 13 170 14 191 6.95e-49 163
Msa0570920 MtrunA17_Chr5g0417791 50.318 157 73 3 14 168 3 156 7.75e-48 158
Msa0570920 MtrunA17_Chr3g0124761 48.734 158 74 3 13 168 6 158 8.16e-48 159
Msa0570920 MtrunA17_Chr8g0384721 45.882 170 86 3 10 177 3 168 1.76e-47 158
Msa0570920 MtrunA17_Chr5g0398971 51.220 164 62 7 9 164 2 155 1.27e-46 157
Msa0570920 MtrunA17_Chr4g0018391 45.856 181 81 6 9 183 2 171 1.36e-46 157
Msa0570920 MtrunA17_Chr4g0056541 47.059 170 76 6 9 173 2 162 8.85e-45 153
Msa0570920 MtrunA17_Chr3g0130731 44.828 174 85 5 10 179 3 169 5.65e-44 149
Msa0570920 MtrunA17_Chr6g0453131 37.229 231 129 6 9 226 10 237 8.99e-44 151
Msa0570920 MtrunA17_Chr2g0311651 38.596 228 113 8 6 221 13 225 1.26e-43 149
Msa0570920 MtrunA17_Chr8g0361731 43.114 167 85 3 8 164 4 170 1.78e-43 150
Msa0570920 MtrunA17_Chr2g0311661 45.783 166 79 4 16 170 23 188 2.27e-43 147
Msa0570920 MtrunA17_Chr2g0318081 47.059 153 72 3 14 164 16 161 3.63e-43 149
Msa0570920 MtrunA17_Chr8g0372121 45.062 162 75 4 14 170 6 158 8.23e-43 147
Msa0570920 MtrunA17_Chr8g0359921 47.059 153 74 3 14 164 14 161 2.13e-42 146
Msa0570920 MtrunA17_Chr3g0109821 50.323 155 67 4 14 164 6 154 5.63e-42 150
Msa0570920 MtrunA17_Chr5g0433781 44.444 180 82 5 14 183 6 177 9.06e-42 150
Msa0570920 MtrunA17_Chr5g0442771 41.951 205 102 7 16 213 20 214 9.59e-42 144
Msa0570920 MtrunA17_Chr5g0405211 45.062 162 74 5 14 170 8 159 1.78e-41 144
Msa0570920 MtrunA17_Chr1g0200561 46.795 156 67 4 14 163 19 164 2.09e-41 144
Msa0570920 MtrunA17_Chr4g0060931 43.750 160 83 3 14 171 17 171 2.40e-41 144
Msa0570920 MtrunA17_Chr3g0139331 40.588 170 92 2 14 181 11 173 2.53e-41 144
Msa0570920 MtrunA17_Chr2g0316971 43.210 162 87 2 12 171 21 179 2.73e-41 144
Msa0570920 MtrunA17_Chr4g0017921 46.286 175 76 7 14 181 8 171 2.90e-41 144
Msa0570920 MtrunA17_Chr2g0309331 42.941 170 84 4 10 174 6 167 6.56e-41 142
Msa0570920 MtrunA17_Chr3g0091921 44.375 160 82 3 14 171 16 170 7.54e-41 141
Msa0570920 MtrunA17_Chr5g0417001 44.805 154 80 2 16 164 16 169 8.84e-41 143
Msa0570920 MtrunA17_Chr6g0484441 43.791 153 75 3 14 164 5 148 1.16e-40 141
Msa0570920 MtrunA17_Chr8g0346001 41.573 178 89 4 2 168 3 176 1.30e-40 144
Msa0570920 MtrunA17_Chr3g0128111 43.558 163 77 4 17 173 45 198 1.67e-40 139
Msa0570920 MtrunA17_Chr6g0481091 44.785 163 77 4 14 172 6 159 1.14e-39 136
Msa0570920 MtrunA17_Chr5g0428991 45.238 168 77 4 11 172 22 180 1.41e-39 144
Msa0570920 MtrunA17_Chr3g0128151 41.530 183 89 5 11 184 19 192 2.05e-39 143
Msa0570920 MtrunA17_Chr4g0076731 46.875 160 73 5 16 173 56 205 2.97e-39 140
Msa0570920 MtrunA17_Chr3g0130101 42.604 169 80 5 16 175 9 169 3.57e-39 138
Msa0570920 MtrunA17_Chr5g0400461 43.293 164 76 4 10 164 2 157 5.51e-39 137
Msa0570920 MtrunA17_Chr6g0453451 40.994 161 88 3 13 171 19 174 2.37e-38 135
Msa0570920 MtrunA17_Chr2g0309891 48.855 131 61 2 14 140 6 134 2.49e-38 136
Msa0570920 MtrunA17_Chr1g0147421 41.040 173 84 4 14 179 27 188 2.75e-38 136
Msa0570920 MtrunA17_Chr7g0253011 43.226 155 81 3 14 164 17 168 5.49e-38 135
Msa0570920 MtrunA17_Chr1g0183741 41.250 160 83 3 7 164 3 153 9.25e-38 132
Msa0570920 MtrunA17_Chr4g0054791 43.575 179 84 5 12 182 4 173 9.29e-38 134
Msa0570920 MtrunA17_Chr8g0384201 39.655 174 90 4 10 175 2 168 9.58e-37 134
Msa0570920 MtrunA17_Chr8g0345671 42.949 156 73 4 14 164 11 155 1.37e-36 132
Msa0570920 MtrunA17_Chr4g0038751 49.606 127 61 2 16 139 17 143 2.14e-36 130
Msa0570920 MtrunA17_Chr7g0261411 42.581 155 78 3 12 164 8 153 2.46e-36 129
Msa0570920 MtrunA17_Chr6g0461661 39.103 156 90 2 14 167 18 170 3.17e-36 131
Msa0570920 MtrunA17_Chr8g0364791 39.080 174 91 4 10 175 2 168 3.61e-36 132
Msa0570920 MtrunA17_Chr3g0144271 46.512 129 66 2 14 139 23 151 1.63e-35 130
Msa0570920 MtrunA17_Chr8g0345691 42.138 159 76 4 11 164 9 156 2.34e-35 129
Msa0570920 MtrunA17_Chr1g0197351 46.154 156 77 3 14 164 42 195 8.89e-35 129
Msa0570920 MtrunA17_Chr2g0312321 38.125 160 89 4 12 169 9 160 2.17e-34 124
Msa0570920 MtrunA17_Chr7g0217721 44.444 135 71 2 7 139 12 144 5.64e-34 124
Msa0570920 MtrunA17_Chr7g0217711 42.754 138 75 2 7 142 12 147 6.48e-34 120
Msa0570920 MtrunA17_Chr1g0197361 38.554 166 87 5 16 175 10 166 1.97e-33 126
Msa0570920 MtrunA17_Chr1g0201021 48.438 128 60 2 16 139 21 146 6.21e-33 125
Msa0570920 MtrunA17_Chr4g0026141 34.272 213 122 6 14 217 5 208 1.82e-32 118
Msa0570920 MtrunA17_Chr3g0092671 38.554 166 87 5 16 175 7 163 2.27e-32 123
Msa0570920 MtrunA17_Chr2g0321631 40.000 160 85 4 15 166 5 161 2.35e-31 115
Msa0570920 MtrunA17_Chr4g0050701 37.821 156 88 4 14 167 11 159 4.31e-30 110
Msa0570920 MtrunA17_Chr7g0243371 64.000 75 27 0 65 139 17 91 1.12e-29 107
Msa0570920 MtrunA17_Chr7g0266701 36.875 160 90 4 14 164 4 161 1.71e-29 110
Msa0570920 MtrunA17_Chr8g0345711 39.161 143 79 4 14 151 12 151 9.74e-29 106
Msa0570920 MtrunA17_Chr8g0345721 36.364 165 70 4 17 147 38 201 5.25e-27 103
Msa0570920 MtrunA17_Chr8g0345741 45.378 119 59 3 25 138 2 119 2.39e-26 99.8
Msa0570920 MtrunA17_Chr2g0321741 45.833 96 47 2 45 137 23 116 5.93e-26 103
Msa0570920 MtrunA17_Chr8g0345731 38.636 132 74 3 14 138 24 155 1.19e-25 98.6
Msa0570920 MtrunA17_Chr8g0345701 36.301 146 71 5 12 138 5 147 2.11e-23 92.8
Msa0570920 MtrunA17_Chr8g0384351 33.533 167 82 6 13 177 9 148 2.19e-23 92.8
Msa0570920 MtrunA17_Chr3g0113001 43.810 105 53 3 65 168 18 117 3.76e-22 92.0
Msa0570920 MtrunA17_Chr3g0113031 43.158 95 51 2 77 171 5 96 1.11e-20 87.8
Msa0570920 MtrunA17_Chr3g0130321 31.902 163 90 7 13 164 6 158 5.71e-19 82.0
Msa0570920 MtrunA17_Chr7g0251651 27.957 186 110 8 13 194 17 182 7.81e-15 70.5
Msa0570920 MtrunA17_Chr7g0251671 28.148 135 89 4 7 137 3 133 2.28e-13 65.9
Msa0570920 MtrunA17_Chr2g0282871 32.215 149 80 8 9 139 48 193 4.04e-13 67.4
Msa0570920 MtrunA17_Chr8g0367761 28.155 206 112 9 9 196 63 250 2.28e-12 64.7
Msa0570920 MtrunA17_Chr4g0040541 30.667 150 82 7 9 139 43 189 4.34e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0570920 AT5G13180.1 61.628 172 57 3 1 171 1 164 2.44e-71 218
Msa0570920 AT2G33480.1 59.064 171 61 4 1 170 1 163 1.26e-64 202
Msa0570920 AT2G33480.2 58.480 171 60 4 1 170 1 161 9.04e-64 199
Msa0570920 AT3G04070.2 46.512 172 85 3 8 172 4 175 7.09e-51 169
Msa0570920 AT1G69490.1 51.613 155 70 3 12 164 7 158 4.16e-50 164
Msa0570920 AT1G77450.1 40.773 233 118 8 6 226 1 225 5.56e-49 161
Msa0570920 AT1G61110.1 51.190 168 70 5 7 164 9 174 6.38e-49 163
Msa0570920 AT3G15510.1 49.677 155 70 3 18 164 21 175 3.39e-48 162
Msa0570920 AT1G01720.1 45.977 174 82 4 13 184 6 169 8.47e-48 159
Msa0570920 AT3G04070.1 42.553 188 85 4 8 172 4 191 2.52e-47 160
Msa0570920 AT4G17980.1 46.541 159 78 2 10 164 2 157 2.55e-46 155
Msa0570920 AT4G17980.2 46.541 159 78 2 10 164 2 157 4.73e-46 155
Msa0570920 AT5G46590.1 47.531 162 76 3 10 167 2 158 5.55e-46 155
Msa0570920 AT1G12260.2 44.809 183 79 7 9 180 2 173 2.62e-45 154
Msa0570920 AT5G39610.1 46.875 160 78 3 14 171 20 174 3.38e-45 152
Msa0570920 AT1G12260.1 44.809 183 79 7 9 180 2 173 8.33e-45 154
Msa0570920 AT5G46590.2 50.331 151 69 3 10 156 2 150 1.08e-44 151
Msa0570920 AT1G62700.1 44.751 181 84 5 9 183 2 172 1.59e-44 154
Msa0570920 AT1G62700.2 44.751 181 84 5 9 183 2 172 1.59e-44 154
Msa0570920 AT1G33060.1 48.387 155 69 3 14 164 24 171 2.82e-44 157
Msa0570920 AT1G33060.2 48.387 155 69 3 14 164 24 171 3.04e-44 157
Msa0570920 AT5G62380.2 44.253 174 83 5 11 179 4 168 5.69e-44 151
Msa0570920 AT5G62380.1 44.253 174 83 5 11 179 4 168 5.69e-44 151
Msa0570920 AT5G63790.1 37.946 224 121 6 14 229 50 263 1.27e-43 149
Msa0570920 AT4G27410.2 45.000 160 78 4 14 171 14 165 1.53e-43 149
Msa0570920 AT5G63790.2 37.946 224 121 6 14 229 60 273 1.60e-43 149
Msa0570920 AT1G52890.1 46.541 159 76 3 14 170 14 165 2.94e-43 148
Msa0570920 AT3G15500.1 46.541 159 76 3 14 170 14 165 3.64e-43 148
Msa0570920 AT3G10490.1 46.795 156 71 4 14 164 27 175 5.24e-43 145
Msa0570920 AT3G10480.2 47.097 155 71 3 14 164 27 174 1.14e-42 150
Msa0570920 AT5G08790.1 44.172 163 86 2 14 174 7 166 1.44e-42 145
Msa0570920 AT1G71930.2 46.497 157 70 4 12 163 7 154 1.64e-42 146
Msa0570920 AT1G71930.1 46.497 157 70 4 12 163 7 154 1.64e-42 146
Msa0570920 AT1G65910.1 48.466 163 71 4 14 172 6 159 1.84e-42 152
Msa0570920 AT1G76420.1 43.429 175 86 4 14 181 22 190 2.20e-42 146
Msa0570920 AT5G61430.1 44.375 160 82 3 14 171 16 170 2.21e-42 146
Msa0570920 AT2G18060.3 43.860 171 81 5 14 179 9 169 4.10e-42 146
Msa0570920 AT2G18060.1 43.860 171 81 5 14 179 9 169 4.10e-42 146
Msa0570920 AT5G07680.1 44.375 160 82 3 14 171 17 171 4.71e-42 145
Msa0570920 AT5G07680.2 44.375 160 82 3 14 171 3 157 4.79e-42 145
Msa0570920 AT5G39820.1 42.515 167 78 3 16 164 22 188 5.18e-42 145
Msa0570920 AT1G32770.1 41.989 181 85 4 2 168 4 178 7.35e-42 145
Msa0570920 AT3G04060.1 44.231 156 81 3 11 164 17 168 2.22e-41 144
Msa0570920 AT4G35580.1 46.497 157 69 4 14 164 9 156 2.34e-41 147
Msa0570920 AT4G35580.2 46.497 157 69 4 14 164 9 156 2.57e-41 147
Msa0570920 AT1G26870.1 43.949 157 82 2 14 164 16 172 2.62e-41 145
Msa0570920 AT4G35580.3 46.497 157 69 4 14 164 9 156 2.70e-41 147
Msa0570920 AT3G10480.1 46.795 156 71 4 14 164 27 175 3.22e-41 146
Msa0570920 AT3G10490.2 46.795 156 71 4 14 164 27 175 3.73e-41 146
Msa0570920 AT3G03200.1 39.189 222 113 7 14 231 6 209 4.73e-41 146
Msa0570920 AT4G10350.1 45.000 160 76 3 14 168 9 161 5.67e-41 143
Msa0570920 AT1G52880.1 48.077 156 70 4 18 164 21 174 6.31e-41 142
Msa0570920 AT1G79580.3 45.181 166 73 4 10 168 13 167 7.99e-41 143
Msa0570920 AT1G79580.5 45.181 166 73 4 10 168 13 167 7.99e-41 143
Msa0570920 AT1G79580.4 45.181 166 73 4 10 168 13 167 7.99e-41 143
Msa0570920 AT1G79580.2 45.181 166 73 4 10 168 13 167 7.99e-41 143
Msa0570920 AT1G79580.1 45.181 166 73 4 10 168 13 167 7.99e-41 143
Msa0570920 AT4G36160.2 44.375 160 75 4 14 168 14 164 8.32e-41 144
Msa0570920 AT1G32510.1 46.199 171 79 3 12 173 4 170 8.40e-41 141
Msa0570920 AT4G36160.1 44.375 160 75 4 14 168 10 160 9.01e-41 143
Msa0570920 AT4G36160.3 44.375 160 75 4 14 168 10 160 9.01e-41 143
Msa0570920 AT3G29035.1 47.222 144 72 2 14 155 24 165 9.84e-41 142
Msa0570920 AT3G61910.1 40.782 179 81 4 4 164 1 172 1.07e-40 142
Msa0570920 AT4G27410.3 40.678 177 78 4 14 171 14 182 1.13e-40 141
Msa0570920 AT2G24430.2 42.945 163 85 2 14 174 16 172 1.88e-40 141
Msa0570920 AT2G24430.1 42.945 163 85 2 14 174 16 172 1.88e-40 141
Msa0570920 AT5G17260.1 47.097 155 72 4 14 164 6 154 3.28e-40 144
Msa0570920 AT2G46770.1 41.040 173 87 4 9 168 11 181 5.55e-40 141
Msa0570920 AT3G15170.1 40.994 161 84 3 12 167 18 172 6.39e-40 139
Msa0570920 AT5G66300.1 44.242 165 76 6 14 172 12 166 6.56e-40 139
Msa0570920 AT2G43000.1 39.904 208 102 6 16 218 20 209 6.88e-40 138
Msa0570920 AT2G02450.1 46.250 160 74 5 16 173 53 202 1.04e-39 140
Msa0570920 AT2G02450.2 46.250 160 74 5 16 173 53 202 1.10e-39 141
Msa0570920 AT3G18400.1 43.137 153 77 3 14 164 5 149 1.44e-39 139
Msa0570920 AT2G17040.1 50.394 127 60 2 16 139 8 134 2.26e-39 137
Msa0570920 AT5G53950.1 43.590 156 77 3 14 164 17 166 3.03e-39 139
Msa0570920 AT3G17730.1 43.558 163 79 4 14 172 6 159 3.52e-39 135
Msa0570920 AT1G33280.1 43.750 176 81 5 14 181 8 173 4.36e-39 137
Msa0570920 AT3G12977.1 36.667 210 115 5 14 213 18 219 1.10e-38 135
Msa0570920 AT5G18270.1 42.331 163 88 3 4 164 11 169 1.85e-38 136
Msa0570920 AT5G18270.2 42.331 163 88 3 4 164 11 169 1.89e-38 136
Msa0570920 AT3G10500.1 41.279 172 90 3 8 175 3 167 3.45e-38 139
Msa0570920 AT1G54330.1 40.719 167 80 4 14 171 6 162 1.00e-36 131
Msa0570920 AT5G24590.2 44.304 158 78 4 11 164 10 161 1.96e-36 133
Msa0570920 AT3G12910.1 41.765 170 88 4 16 174 23 192 2.93e-36 130
Msa0570920 AT5G09330.5 43.503 177 81 6 10 176 2 169 3.92e-36 133
Msa0570920 AT5G09330.2 43.503 177 81 6 10 176 2 169 3.92e-36 133
Msa0570920 AT5G09330.4 43.503 177 81 6 10 176 2 169 3.92e-36 133
Msa0570920 AT5G09330.3 43.503 177 81 6 10 176 2 169 3.92e-36 133
Msa0570920 AT5G09330.1 43.503 177 81 6 10 176 2 169 3.92e-36 133
Msa0570920 AT1G56010.2 39.024 164 93 4 12 172 17 176 5.10e-36 129
Msa0570920 AT3G10480.3 39.153 189 70 5 14 164 27 208 8.67e-36 132
Msa0570920 AT5G04395.1 43.750 144 65 2 14 141 28 171 9.09e-36 125
Msa0570920 AT5G04410.1 38.418 177 94 4 8 176 3 172 1.87e-35 132
Msa0570920 AT3G49530.2 42.581 155 79 4 14 164 13 161 8.08e-35 128
Msa0570920 AT3G49530.1 42.581 155 79 4 14 164 13 161 2.01e-34 128
Msa0570920 AT3G44290.2 36.702 188 97 5 7 191 7 175 2.10e-34 123
Msa0570920 AT1G34180.3 50.781 128 57 2 16 139 18 143 3.54e-34 127
Msa0570920 AT1G34180.1 50.781 128 57 2 16 139 18 143 9.63e-34 127
Msa0570920 AT5G22290.1 36.082 194 103 5 16 205 23 199 1.47e-33 124
Msa0570920 AT3G44290.1 36.702 188 97 5 7 191 7 175 1.65e-33 123
Msa0570920 AT5G64060.1 40.000 180 91 6 10 183 2 170 3.54e-33 123
Msa0570920 AT4G28530.1 39.227 181 83 5 7 169 3 174 7.23e-33 122
Msa0570920 AT2G27300.1 42.857 140 75 2 1 137 1 138 1.33e-32 121
Msa0570920 AT1G34190.1 48.438 128 60 2 16 139 18 143 1.89e-32 124
Msa0570920 AT2G33480.3 52.679 112 45 3 59 170 3 106 6.30e-32 116
Msa0570920 AT1G34180.4 47.143 140 56 3 16 139 18 155 7.99e-32 121
Msa0570920 AT1G34180.2 47.143 140 56 3 16 139 18 155 1.66e-31 121
Msa0570920 AT5G50820.1 37.500 168 95 6 5 168 7 168 2.23e-29 109
Msa0570920 AT4G01520.1 43.182 132 68 4 15 139 5 136 1.19e-27 107
Msa0570920 AT5G14000.1 34.940 166 96 3 7 170 8 163 3.09e-27 103
Msa0570920 AT5G22380.1 34.091 220 120 7 17 221 8 217 3.57e-27 104
Msa0570920 AT4G01550.1 44.186 129 66 3 17 139 7 135 6.48e-27 107
Msa0570920 AT1G32870.2 47.059 136 64 4 7 139 5 135 6.78e-27 108
Msa0570920 AT1G32870.1 47.059 136 64 4 7 139 5 135 7.04e-27 108
Msa0570920 AT1G32870.3 47.059 136 64 4 7 139 41 171 9.54e-27 107
Msa0570920 AT5G64530.1 36.025 161 82 4 14 164 3 152 1.03e-26 102
Msa0570920 AT5G64530.2 41.732 127 62 3 14 139 3 118 1.13e-26 101
Msa0570920 AT5G14000.2 35.915 142 87 2 7 146 8 147 3.14e-26 100
Msa0570920 AT4G01540.4 42.308 130 68 4 17 139 7 136 5.23e-26 104
Msa0570920 AT4G01540.2 42.308 130 68 4 17 139 7 136 6.06e-26 104
Msa0570920 AT4G01540.1 42.308 130 68 4 17 139 7 136 1.10e-25 104
Msa0570920 AT4G01540.3 42.308 130 68 4 17 139 7 136 1.47e-25 103
Msa0570920 AT3G44350.2 31.674 221 138 6 17 229 8 223 5.90e-25 99.0
Msa0570920 AT3G44350.1 39.286 140 75 4 17 149 8 144 3.50e-24 94.7
Msa0570920 AT3G12977.2 36.538 156 83 4 66 213 19 166 7.33e-24 95.5
Msa0570920 AT5G61430.2 42.991 107 56 2 65 171 6 107 8.22e-24 96.7
Msa0570920 AT4G10350.2 43.519 108 54 2 61 168 14 114 9.85e-24 96.7
Msa0570920 AT1G02230.1 33.721 172 94 6 15 179 4 162 1.11e-23 97.8
Msa0570920 AT1G02250.1 35.625 160 84 5 15 167 4 151 2.05e-23 97.1
Msa0570920 AT1G56010.1 40.187 107 60 2 66 172 7 109 4.49e-22 91.7
Msa0570920 AT3G04420.2 38.931 131 68 4 15 137 4 130 1.53e-21 90.9
Msa0570920 AT3G04420.1 38.931 131 68 4 15 137 4 130 1.97e-21 91.3
Msa0570920 AT1G01010.1 37.313 134 70 4 17 138 6 137 1.57e-19 86.7
Msa0570920 AT3G10490.4 47.561 82 35 3 84 164 1 75 2.74e-19 85.5
Msa0570920 AT3G10490.3 47.561 82 35 3 84 164 1 75 2.74e-19 85.5
Msa0570920 AT2G43000.2 37.931 145 69 5 77 218 5 131 6.25e-19 82.0
Msa0570920 AT2G18060.2 45.556 90 39 4 90 179 2 81 4.30e-18 81.3
Msa0570920 AT1G02220.1 38.931 131 65 5 15 137 4 127 4.69e-18 82.4
Msa0570920 AT3G04430.1 33.898 177 94 7 20 175 6 180 8.22e-17 76.3
Msa0570920 AT4G28530.2 30.357 168 99 3 7 156 3 170 7.76e-16 75.5
Msa0570920 AT3G56530.1 30.061 163 90 6 14 166 52 200 1.37e-15 74.7
Msa0570920 AT5G22290.2 35.345 116 57 4 91 205 2 100 9.16e-14 68.9
Msa0570920 AT1G28470.1 31.875 160 87 9 2 143 66 221 1.85e-13 68.9
Msa0570920 AT4G29230.1 31.579 152 75 8 14 139 48 196 2.00e-11 63.5
Msa0570920 AT4G29230.2 31.579 152 75 8 14 139 47 195 2.09e-11 63.5
Msa0570920 AT4G29230.3 30.921 152 76 8 14 139 48 196 2.37e-11 63.2
Msa0570920 AT3G55210.1 24.277 173 104 4 14 170 11 172 3.93e-11 62.0

Find 55 sgRNAs with CRISPR-Local

Find 173 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTACTCCTTCTCAAAAT+TGG 0.175215 4_1:+73343734 None:intergenic
CATAATCCTCTGGCGTTAAA+TGG 0.201755 4_1:+73342275 None:intergenic
TCAAACATTAATCTCGAATT+AGG 0.265228 4_1:+73342470 None:intergenic
AAAAGAAGTGGTTTAGAATA+TGG 0.287121 4_1:-73342518 Msa0570920:CDS
ATTTCTATACTTTGCTTCCT+TGG 0.288379 4_1:+73343033 None:intergenic
TCAACTTGTAATAGCATTGT+AGG 0.302134 4_1:-73342938 Msa0570920:CDS
AGAGACCTCAATATTGTTAC+TGG 0.305766 4_1:+73342391 None:intergenic
AATCAGTTCTAGACCCATTT+GGG 0.329258 4_1:+73342879 None:intergenic
GAACAACAAAATGTGGATAT+TGG 0.340464 4_1:-73342994 Msa0570920:CDS
CCATGCAAAATTAACTCATT+TGG 0.364633 4_1:-73343812 None:intergenic
CAATCAGTTCTAGACCCATT+TGG 0.376037 4_1:+73342878 None:intergenic
TGTGGATATTGGAAGGCAAC+AGG 0.396475 4_1:-73342983 Msa0570920:CDS
AATTTCAGTGTTTAAGCAAA+TGG 0.405837 4_1:-73343712 Msa0570920:exon
CAGAACTATGGAAATGAGAT+AGG 0.420021 4_1:-73342572 Msa0570920:CDS
TGTTTGCAAGTATGATCCTT+GGG 0.435717 4_1:-73343544 Msa0570920:CDS
AAATGGATGTAGCAAAGAAA+TGG 0.455690 4_1:+73342292 None:intergenic
CAAAGTATAGAAATAGTAAT+CGG 0.458697 4_1:-73343024 Msa0570920:CDS
AAGCTGGAGCTTATTATACA+TGG 0.465979 4_1:+73342148 None:intergenic
AACATTGACCTCAGGAATGA+TGG 0.468324 4_1:+73343563 None:intergenic
AACACAAGCTCTTCATCTGT+TGG 0.471066 4_1:+73343630 None:intergenic
CAAGCTCTTCATCTGTTGGT+TGG 0.493179 4_1:+73343634 None:intergenic
TATGAAGGGAAATCCCCAAA+TGG 0.497265 4_1:-73342893 Msa0570920:CDS
TGGAAATGAGATAGGAGAAT+GGG 0.504294 4_1:-73342564 Msa0570920:CDS
TATGATCCTTGGGATTTGCC+AGG 0.504380 4_1:-73343534 Msa0570920:intron
ATGTTTGCAAGTATGATCCT+TGG 0.507170 4_1:-73343545 Msa0570920:CDS
CAACTTGTAATAGCATTGTA+GGG 0.515784 4_1:-73342937 Msa0570920:CDS
AGGAATGATGGAAGCAGGCA+AGG 0.516507 4_1:+73343575 None:intergenic
ACCTCAGGAATGATGGAAGC+AGG 0.516623 4_1:+73343570 None:intergenic
ATGAAGGGAAATCCCCAAAT+GGG 0.516990 4_1:-73342892 Msa0570920:CDS
CTCAAAATTGGAACAACCAA+AGG 0.521331 4_1:+73343746 None:intergenic
GCATCTAATACATAATCCTC+TGG 0.525247 4_1:+73342265 None:intergenic
AACAAAATGTGGATATTGGA+AGG 0.533417 4_1:-73342990 Msa0570920:CDS
GCCTGCTTCCATCATTCCTG+AGG 0.534650 4_1:-73343571 Msa0570920:CDS
ATGGAAATGAGATAGGAGAA+TGG 0.536346 4_1:-73342565 Msa0570920:CDS
TACTTGCAAACATTGACCTC+AGG 0.544904 4_1:+73343555 None:intergenic
GGAATGATGGAAGCAGGCAA+GGG 0.549247 4_1:+73343576 None:intergenic
CAAATGGGTCTAGAACTGAT+TGG 0.560786 4_1:-73342877 Msa0570920:CDS
ATGAGTAGAACAACAAAATG+TGG 0.563550 4_1:-73343001 Msa0570920:CDS
AACATTAATCTCGAATTAGG+AGG 0.573486 4_1:+73342473 None:intergenic
AAGTTCCAGTAACAATATTG+AGG 0.579160 4_1:-73342396 Msa0570920:CDS
CTACATCCATTTAACGCCAG+AGG 0.579480 4_1:-73342281 Msa0570920:three_prime_UTR
AACTACTAACAACTCAACTC+AGG 0.584456 4_1:-73342822 Msa0570920:intron
TACTGACCTGGCAAATCCCA+AGG 0.595838 4_1:+73343528 None:intergenic
TAGGAGAATGGGTTCTGTGT+CGG 0.601018 4_1:-73342553 Msa0570920:CDS
GGAGTGAGTAGATTGCCTCC+TGG 0.605400 4_1:-73343666 Msa0570920:CDS
GTGGATATTGGAAGGCAACA+GGG 0.617430 4_1:-73342982 Msa0570920:CDS
ATCAGTTCTAGACCCATTTG+GGG 0.628898 4_1:+73342880 None:intergenic
GTTGGTTGGAAACGAAAACC+AGG 0.630000 4_1:+73343648 None:intergenic
GAATGATGGAAGCAGGCAAG+GGG 0.638798 4_1:+73343577 None:intergenic
ACTGGAACTTGAGCATGAAG+AGG 0.652135 4_1:+73342409 None:intergenic
TTATCTGTGAGGAAAAGAAG+TGG 0.657141 4_1:-73342530 Msa0570920:CDS
TAGTAGTTTCTACATTGACG+AGG 0.667081 4_1:+73342837 None:intergenic
TTCTGTGTCGGTTATCTGTG+AGG 0.669962 4_1:-73342541 Msa0570920:CDS
GAGTTTGTGATGAACAAGAG+AGG 0.686120 4_1:-73343069 Msa0570920:CDS
GGTTGGAAACGAAAACCAGG+AGG 0.757632 4_1:+73343651 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTTTTAAAAATAT+TGG + chr4_1:73343280-73343299 None:intergenic 0.0%
!!! AATTTTTTTTTTAAAAATAT+TGG + chr4_1:73343280-73343299 None:intergenic 0.0%
!!! TTAATATAGTTTAACTTTTT+TGG - chr4_1:73343357-73343376 Msa0570920:intron 10.0%
!!! TAATATAGTTTAACTTTTTT+GGG - chr4_1:73343358-73343377 Msa0570920:intron 10.0%
!!! TTAATATAGTTTAACTTTTT+TGG - chr4_1:73343357-73343376 Msa0570920:intron 10.0%
!!! TAATATAGTTTAACTTTTTT+GGG - chr4_1:73343358-73343377 Msa0570920:intron 10.0%
!!! AAGCTGAATTTTATTAAAAA+TGG - chr4_1:73342270-73342289 Msa0570920:three_prime_UTR 15.0%
!!! TCTTCTTTATTATTTGTTAA+TGG + chr4_1:73342826-73342845 None:intergenic 15.0%
!!! ATTAATGTTTGATTTTATGA+TGG - chr4_1:73343498-73343517 Msa0570920:intron 15.0%
!!! TTAGTACAATATTTTAATCA+TGG + chr4_1:73343737-73343756 None:intergenic 15.0%
!!! AAGCTGAATTTTATTAAAAA+TGG - chr4_1:73342270-73342289 Msa0570920:three_prime_UTR 15.0%
!!! TCTTCTTTATTATTTGTTAA+TGG + chr4_1:73342826-73342845 None:intergenic 15.0%
!!! ATTAATGTTTGATTTTATGA+TGG - chr4_1:73343498-73343517 Msa0570920:intron 15.0%
!!! TTAGTACAATATTTTAATCA+TGG + chr4_1:73343737-73343756 None:intergenic 15.0%
!!! GTAACTTTTTCTAGTATTTT+TGG - chr4_1:73342449-73342468 Msa0570920:CDS 20.0%
!! CTAGTTAATAAGATTTAAGT+TGG + chr4_1:73342624-73342643 None:intergenic 20.0%
!!! AAGAAGAACTTATTTGTTAA+TGG + chr4_1:73342683-73342702 None:intergenic 20.0%
!! CTAGTTAATAAGATTTAAGT+TGG + chr4_1:73342624-73342643 None:intergenic 20.0%
!!! TTAACATTGTTTTGTTTGAT+TGG - chr4_1:73342860-73342879 Msa0570920:CDS 20.0%
!!! TAACATTGTTTTGTTTGATT+GGG - chr4_1:73342861-73342880 Msa0570920:CDS 20.0%
!! CAAAGTATAGAAATAGTAAT+CGG - chr4_1:73342933-73342952 Msa0570920:CDS 20.0%
!! CAATAGAGTTCAAATTATTT+CGG - chr4_1:73343202-73343221 Msa0570920:intron 20.0%
!! CAAATTATTTCGGAAATATA+TGG - chr4_1:73343212-73343231 Msa0570920:intron 20.0%
!! TATGTGAAAATAGATCATTA+TGG - chr4_1:73343311-73343330 Msa0570920:intron 20.0%
!!! GTAACTTTTTCTAGTATTTT+TGG - chr4_1:73342449-73342468 Msa0570920:CDS 20.0%
!! CTAGTTAATAAGATTTAAGT+TGG + chr4_1:73342624-73342643 None:intergenic 20.0%
!!! AAGAAGAACTTATTTGTTAA+TGG + chr4_1:73342683-73342702 None:intergenic 20.0%
!! CTAGTTAATAAGATTTAAGT+TGG + chr4_1:73342624-73342643 None:intergenic 20.0%
!!! TTAACATTGTTTTGTTTGAT+TGG - chr4_1:73342860-73342879 Msa0570920:CDS 20.0%
!!! TAACATTGTTTTGTTTGATT+GGG - chr4_1:73342861-73342880 Msa0570920:CDS 20.0%
!! CAAAGTATAGAAATAGTAAT+CGG - chr4_1:73342933-73342952 Msa0570920:CDS 20.0%
!! CAATAGAGTTCAAATTATTT+CGG - chr4_1:73343202-73343221 Msa0570920:intron 20.0%
!! CAAATTATTTCGGAAATATA+TGG - chr4_1:73343212-73343231 Msa0570920:intron 20.0%
!! TATGTGAAAATAGATCATTA+TGG - chr4_1:73343311-73343330 Msa0570920:intron 20.0%
! TAATTACTCCTTCTCAAAAT+TGG + chr4_1:73342226-73342245 None:intergenic 25.0%
! AATTTCAGTGTTTAAGCAAA+TGG - chr4_1:73342245-73342264 Msa0570920:three_prime_UTR 25.0%
! TAGAAAAATATGTAAGATCC+GGG + chr4_1:73342493-73342512 None:intergenic 25.0%
! CTAGAAAAATATGTAAGATC+CGG + chr4_1:73342494-73342513 None:intergenic 25.0%
!! AAAAGAAGTGGTTTAGAATA+TGG - chr4_1:73343439-73343458 Msa0570920:intron 25.0%
! TCAAACATTAATCTCGAATT+AGG + chr4_1:73343490-73343509 None:intergenic 25.0%
!!! ACAATATTTTAATCATGGCT+AGG + chr4_1:73343732-73343751 None:intergenic 25.0%
!! TTGACCAAATGAGTTAATTT+TGG + chr4_1:73342152-73342171 None:intergenic 25.0%
! TAATTACTCCTTCTCAAAAT+TGG + chr4_1:73342226-73342245 None:intergenic 25.0%
! AATTTCAGTGTTTAAGCAAA+TGG - chr4_1:73342245-73342264 Msa0570920:three_prime_UTR 25.0%
! TAGAAAAATATGTAAGATCC+GGG + chr4_1:73342493-73342512 None:intergenic 25.0%
! CTAGAAAAATATGTAAGATC+CGG + chr4_1:73342494-73342513 None:intergenic 25.0%
!! AAAAGAAGTGGTTTAGAATA+TGG - chr4_1:73343439-73343458 Msa0570920:intron 25.0%
! TCAAACATTAATCTCGAATT+AGG + chr4_1:73343490-73343509 None:intergenic 25.0%
!!! ACAATATTTTAATCATGGCT+AGG + chr4_1:73343732-73343751 None:intergenic 25.0%
!!! TCCTATTTTTTTGCTTCCTT+TGG - chr4_1:73342195-73342214 Msa0570920:three_prime_UTR 30.0%
ACCAAAGGAAGCAAAAAAAT+AGG + chr4_1:73342199-73342218 None:intergenic 30.0%
!!! CTAGTATTTTTGGTGTTGTA+CGG - chr4_1:73342459-73342478 Msa0570920:CDS 30.0%
!!! TAGTATTTTTGGTGTTGTAC+GGG - chr4_1:73342460-73342479 Msa0570920:CDS 30.0%
!!! TTGTTTTGTTTGATTGGGAT+AGG - chr4_1:73342866-73342885 Msa0570920:CDS 30.0%
ATTTCTATACTTTGCTTCCT+TGG + chr4_1:73342927-73342946 None:intergenic 30.0%
ATGAGTAGAACAACAAAATG+TGG - chr4_1:73342956-73342975 Msa0570920:CDS 30.0%
GAACAACAAAATGTGGATAT+TGG - chr4_1:73342963-73342982 Msa0570920:CDS 30.0%
AACAAAATGTGGATATTGGA+AGG - chr4_1:73342967-73342986 Msa0570920:CDS 30.0%
TCAACTTGTAATAGCATTGT+AGG - chr4_1:73343019-73343038 Msa0570920:CDS 30.0%
CAACTTGTAATAGCATTGTA+GGG - chr4_1:73343020-73343039 Msa0570920:CDS 30.0%
!!! AAAACTCTGGTTTTCTATGA+AGG - chr4_1:73343049-73343068 Msa0570920:CDS 30.0%
!!! AAACTCTGGTTTTCTATGAA+GGG - chr4_1:73343050-73343069 Msa0570920:CDS 30.0%
AACATTAATCTCGAATTAGG+AGG + chr4_1:73343487-73343506 None:intergenic 30.0%
AAGTTCCAGTAACAATATTG+AGG - chr4_1:73343561-73343580 Msa0570920:CDS 30.0%
AAATGGATGTAGCAAAGAAA+TGG + chr4_1:73343668-73343687 None:intergenic 30.0%
!!! TCCTATTTTTTTGCTTCCTT+TGG - chr4_1:73342195-73342214 Msa0570920:three_prime_UTR 30.0%
ACCAAAGGAAGCAAAAAAAT+AGG + chr4_1:73342199-73342218 None:intergenic 30.0%
!!! CTAGTATTTTTGGTGTTGTA+CGG - chr4_1:73342459-73342478 Msa0570920:CDS 30.0%
!!! TAGTATTTTTGGTGTTGTAC+GGG - chr4_1:73342460-73342479 Msa0570920:CDS 30.0%
!!! TTGTTTTGTTTGATTGGGAT+AGG - chr4_1:73342866-73342885 Msa0570920:CDS 30.0%
ATTTCTATACTTTGCTTCCT+TGG + chr4_1:73342927-73342946 None:intergenic 30.0%
ATGAGTAGAACAACAAAATG+TGG - chr4_1:73342956-73342975 Msa0570920:CDS 30.0%
GAACAACAAAATGTGGATAT+TGG - chr4_1:73342963-73342982 Msa0570920:CDS 30.0%
AACAAAATGTGGATATTGGA+AGG - chr4_1:73342967-73342986 Msa0570920:CDS 30.0%
TCAACTTGTAATAGCATTGT+AGG - chr4_1:73343019-73343038 Msa0570920:CDS 30.0%
CAACTTGTAATAGCATTGTA+GGG - chr4_1:73343020-73343039 Msa0570920:CDS 30.0%
!!! AAAACTCTGGTTTTCTATGA+AGG - chr4_1:73343049-73343068 Msa0570920:CDS 30.0%
!!! AAACTCTGGTTTTCTATGAA+GGG - chr4_1:73343050-73343069 Msa0570920:CDS 30.0%
AACATTAATCTCGAATTAGG+AGG + chr4_1:73343487-73343506 None:intergenic 30.0%
AAGTTCCAGTAACAATATTG+AGG - chr4_1:73343561-73343580 Msa0570920:CDS 30.0%
AAATGGATGTAGCAAAGAAA+TGG + chr4_1:73343668-73343687 None:intergenic 30.0%
CTCAAAATTGGAACAACCAA+AGG + chr4_1:73342214-73342233 None:intergenic 35.0%
!! TGGTTGTTCCAATTTTGAGA+AGG - chr4_1:73342215-73342234 Msa0570920:three_prime_UTR 35.0%
ATGTTTGCAAGTATGATCCT+TGG - chr4_1:73342412-73342431 Msa0570920:CDS 35.0%
TGTTTGCAAGTATGATCCTT+GGG - chr4_1:73342413-73342432 Msa0570920:CDS 35.0%
ACTAGAAAAAGTTACTGACC+TGG + chr4_1:73342444-73342463 None:intergenic 35.0%
!!! AGTATTTTTGGTGTTGTACG+GGG - chr4_1:73342461-73342480 Msa0570920:CDS 35.0%
TGTAGGGTTAAGAAAAACTC+TGG - chr4_1:73343036-73343055 Msa0570920:CDS 35.0%
!! AATCAGTTCTAGACCCATTT+GGG + chr4_1:73343081-73343100 None:intergenic 35.0%
TAGTAGTTTCTACATTGACG+AGG + chr4_1:73343123-73343142 None:intergenic 35.0%
AACTACTAACAACTCAACTC+AGG - chr4_1:73343135-73343154 Msa0570920:intron 35.0%
!!! TTTTTGGGTTGTCAGAACTA+TGG - chr4_1:73343373-73343392 Msa0570920:intron 35.0%
CAGAACTATGGAAATGAGAT+AGG - chr4_1:73343385-73343404 Msa0570920:intron 35.0%
ATGGAAATGAGATAGGAGAA+TGG - chr4_1:73343392-73343411 Msa0570920:intron 35.0%
TGGAAATGAGATAGGAGAAT+GGG - chr4_1:73343393-73343412 Msa0570920:intron 35.0%
TTATCTGTGAGGAAAAGAAG+TGG - chr4_1:73343427-73343446 Msa0570920:intron 35.0%
AGAGACCTCAATATTGTTAC+TGG + chr4_1:73343569-73343588 None:intergenic 35.0%
GCATCTAATACATAATCCTC+TGG + chr4_1:73343695-73343714 None:intergenic 35.0%
CTCAAAATTGGAACAACCAA+AGG + chr4_1:73342214-73342233 None:intergenic 35.0%
!! TGGTTGTTCCAATTTTGAGA+AGG - chr4_1:73342215-73342234 Msa0570920:three_prime_UTR 35.0%
ATGTTTGCAAGTATGATCCT+TGG - chr4_1:73342412-73342431 Msa0570920:CDS 35.0%
TGTTTGCAAGTATGATCCTT+GGG - chr4_1:73342413-73342432 Msa0570920:CDS 35.0%
ACTAGAAAAAGTTACTGACC+TGG + chr4_1:73342444-73342463 None:intergenic 35.0%
!!! AGTATTTTTGGTGTTGTACG+GGG - chr4_1:73342461-73342480 Msa0570920:CDS 35.0%
TGTAGGGTTAAGAAAAACTC+TGG - chr4_1:73343036-73343055 Msa0570920:CDS 35.0%
!! AATCAGTTCTAGACCCATTT+GGG + chr4_1:73343081-73343100 None:intergenic 35.0%
TAGTAGTTTCTACATTGACG+AGG + chr4_1:73343123-73343142 None:intergenic 35.0%
AACTACTAACAACTCAACTC+AGG - chr4_1:73343135-73343154 Msa0570920:intron 35.0%
!!! TTTTTGGGTTGTCAGAACTA+TGG - chr4_1:73343373-73343392 Msa0570920:intron 35.0%
CAGAACTATGGAAATGAGAT+AGG - chr4_1:73343385-73343404 Msa0570920:intron 35.0%
ATGGAAATGAGATAGGAGAA+TGG - chr4_1:73343392-73343411 Msa0570920:intron 35.0%
TGGAAATGAGATAGGAGAAT+GGG - chr4_1:73343393-73343412 Msa0570920:intron 35.0%
TTATCTGTGAGGAAAAGAAG+TGG - chr4_1:73343427-73343446 Msa0570920:intron 35.0%
AGAGACCTCAATATTGTTAC+TGG + chr4_1:73343569-73343588 None:intergenic 35.0%
GCATCTAATACATAATCCTC+TGG + chr4_1:73343695-73343714 None:intergenic 35.0%
AACACAAGCTCTTCATCTGT+TGG + chr4_1:73342330-73342349 None:intergenic 40.0%
AACATTGACCTCAGGAATGA+TGG + chr4_1:73342397-73342416 None:intergenic 40.0%
TACTTGCAAACATTGACCTC+AGG + chr4_1:73342405-73342424 None:intergenic 40.0%
GAGTTTGTGATGAACAAGAG+AGG - chr4_1:73342888-73342907 Msa0570920:CDS 40.0%
TATGAAGGGAAATCCCCAAA+TGG - chr4_1:73343064-73343083 Msa0570920:CDS 40.0%
ATGAAGGGAAATCCCCAAAT+GGG - chr4_1:73343065-73343084 Msa0570920:CDS 40.0%
!! ATCAGTTCTAGACCCATTTG+GGG + chr4_1:73343080-73343099 None:intergenic 40.0%
!! CAATCAGTTCTAGACCCATT+TGG + chr4_1:73343082-73343101 None:intergenic 40.0%
! CAAATGGGTCTAGAACTGAT+TGG - chr4_1:73343080-73343099 Msa0570920:intron 40.0%
CATAATCCTCTGGCGTTAAA+TGG + chr4_1:73343685-73343704 None:intergenic 40.0%
AACACAAGCTCTTCATCTGT+TGG + chr4_1:73342330-73342349 None:intergenic 40.0%
AACATTGACCTCAGGAATGA+TGG + chr4_1:73342397-73342416 None:intergenic 40.0%
TACTTGCAAACATTGACCTC+AGG + chr4_1:73342405-73342424 None:intergenic 40.0%
GAGTTTGTGATGAACAAGAG+AGG - chr4_1:73342888-73342907 Msa0570920:CDS 40.0%
TATGAAGGGAAATCCCCAAA+TGG - chr4_1:73343064-73343083 Msa0570920:CDS 40.0%
ATGAAGGGAAATCCCCAAAT+GGG - chr4_1:73343065-73343084 Msa0570920:CDS 40.0%
!! ATCAGTTCTAGACCCATTTG+GGG + chr4_1:73343080-73343099 None:intergenic 40.0%
!! CAATCAGTTCTAGACCCATT+TGG + chr4_1:73343082-73343101 None:intergenic 40.0%
! CAAATGGGTCTAGAACTGAT+TGG - chr4_1:73343080-73343099 Msa0570920:intron 40.0%
CATAATCCTCTGGCGTTAAA+TGG + chr4_1:73343685-73343704 None:intergenic 40.0%
GTTGGTTGGAAACGAAAACC+AGG + chr4_1:73342312-73342331 None:intergenic 45.0%
CAAGCTCTTCATCTGTTGGT+TGG + chr4_1:73342326-73342345 None:intergenic 45.0%
TATGATCCTTGGGATTTGCC+AGG - chr4_1:73342423-73342442 Msa0570920:CDS 45.0%
!!! GAGGCACTTTTTTAGCTCCA+AGG - chr4_1:73342907-73342926 Msa0570920:CDS 45.0%
TGTGGATATTGGAAGGCAAC+AGG - chr4_1:73342974-73342993 Msa0570920:CDS 45.0%
GTGGATATTGGAAGGCAACA+GGG - chr4_1:73342975-73342994 Msa0570920:CDS 45.0%
! TAGGAGAATGGGTTCTGTGT+CGG - chr4_1:73343404-73343423 Msa0570920:intron 45.0%
!! TTCTGTGTCGGTTATCTGTG+AGG - chr4_1:73343416-73343435 Msa0570920:intron 45.0%
ACTGGAACTTGAGCATGAAG+AGG + chr4_1:73343551-73343570 None:intergenic 45.0%
CTACATCCATTTAACGCCAG+AGG - chr4_1:73343676-73343695 Msa0570920:CDS 45.0%
GTTGGTTGGAAACGAAAACC+AGG + chr4_1:73342312-73342331 None:intergenic 45.0%
CAAGCTCTTCATCTGTTGGT+TGG + chr4_1:73342326-73342345 None:intergenic 45.0%
TATGATCCTTGGGATTTGCC+AGG - chr4_1:73342423-73342442 Msa0570920:CDS 45.0%
!!! GAGGCACTTTTTTAGCTCCA+AGG - chr4_1:73342907-73342926 Msa0570920:CDS 45.0%
TGTGGATATTGGAAGGCAAC+AGG - chr4_1:73342974-73342993 Msa0570920:CDS 45.0%
GTGGATATTGGAAGGCAACA+GGG - chr4_1:73342975-73342994 Msa0570920:CDS 45.0%
! TAGGAGAATGGGTTCTGTGT+CGG - chr4_1:73343404-73343423 Msa0570920:intron 45.0%
!! TTCTGTGTCGGTTATCTGTG+AGG - chr4_1:73343416-73343435 Msa0570920:intron 45.0%
ACTGGAACTTGAGCATGAAG+AGG + chr4_1:73343551-73343570 None:intergenic 45.0%
CTACATCCATTTAACGCCAG+AGG - chr4_1:73343676-73343695 Msa0570920:CDS 45.0%
GGTTGGAAACGAAAACCAGG+AGG + chr4_1:73342309-73342328 None:intergenic 50.0%
! GAATGATGGAAGCAGGCAAG+GGG + chr4_1:73342383-73342402 None:intergenic 50.0%
! GGAATGATGGAAGCAGGCAA+GGG + chr4_1:73342384-73342403 None:intergenic 50.0%
! AGGAATGATGGAAGCAGGCA+AGG + chr4_1:73342385-73342404 None:intergenic 50.0%
! ACCTCAGGAATGATGGAAGC+AGG + chr4_1:73342390-73342409 None:intergenic 50.0%
TACTGACCTGGCAAATCCCA+AGG + chr4_1:73342432-73342451 None:intergenic 50.0%
GGTTGGAAACGAAAACCAGG+AGG + chr4_1:73342309-73342328 None:intergenic 50.0%
! GAATGATGGAAGCAGGCAAG+GGG + chr4_1:73342383-73342402 None:intergenic 50.0%
! GGAATGATGGAAGCAGGCAA+GGG + chr4_1:73342384-73342403 None:intergenic 50.0%
! AGGAATGATGGAAGCAGGCA+AGG + chr4_1:73342385-73342404 None:intergenic 50.0%
! ACCTCAGGAATGATGGAAGC+AGG + chr4_1:73342390-73342409 None:intergenic 50.0%
TACTGACCTGGCAAATCCCA+AGG + chr4_1:73342432-73342451 None:intergenic 50.0%
GGAGTGAGTAGATTGCCTCC+TGG - chr4_1:73342291-73342310 Msa0570920:three_prime_UTR 55.0%
GCCTGCTTCCATCATTCCTG+AGG - chr4_1:73342386-73342405 Msa0570920:CDS 55.0%
GGAGTGAGTAGATTGCCTCC+TGG - chr4_1:73342291-73342310 Msa0570920:three_prime_UTR 55.0%
GCCTGCTTCCATCATTCCTG+AGG - chr4_1:73342386-73342405 Msa0570920:CDS 55.0%
TGTTGTACGGGGTTCGAGCC+CGG - chr4_1:73342472-73342491 Msa0570920:CDS 60.0%
TGTTGTACGGGGTTCGAGCC+CGG - chr4_1:73342472-73342491 Msa0570920:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 73342150 73343829 73342150 ID=Msa0570920;Name=Msa0570920
chr4_1 mRNA 73342150 73343829 73342150 ID=Msa0570920-mRNA-1;Parent=Msa0570920;Name=Msa0570920-mRNA-1;_AED=0.06;_eAED=0.06;_QI=114|1|1|1|1|1|3|196|231
chr4_1 exon 73342150 73342591 73342150 ID=Msa0570920-mRNA-1:exon:25144;Parent=Msa0570920-mRNA-1
chr4_1 exon 73342823 73343091 73342823 ID=Msa0570920-mRNA-1:exon:25143;Parent=Msa0570920-mRNA-1
chr4_1 exon 73343535 73343829 73343535 ID=Msa0570920-mRNA-1:exon:25142;Parent=Msa0570920-mRNA-1
chr4_1 five_prime_UTR 73343716 73343829 73343716 ID=Msa0570920-mRNA-1:five_prime_utr;Parent=Msa0570920-mRNA-1
chr4_1 CDS 73343535 73343715 73343535 ID=Msa0570920-mRNA-1:cds;Parent=Msa0570920-mRNA-1
chr4_1 CDS 73342823 73343091 73342823 ID=Msa0570920-mRNA-1:cds;Parent=Msa0570920-mRNA-1
chr4_1 CDS 73342346 73342591 73342346 ID=Msa0570920-mRNA-1:cds;Parent=Msa0570920-mRNA-1
chr4_1 three_prime_UTR 73342150 73342345 73342150 ID=Msa0570920-mRNA-1:three_prime_utr;Parent=Msa0570920-mRNA-1
Gene Sequence

>Msa0570920

ATGGATAAGCTGAATTTTATTAAAAATGGAGTGAGTAGATTGCCTCCTGGTTTTCGTTTCCAACCAACAGATGAAGAGCTTGTGTTTAATTATTTGAAATGTAAAATCTTCTCATGCCCCTTGCCTGCTTCCATCATTCCTGAGGTCAATGTTTGCAAGTATGATCCTTGGGATTTGCCAGGAGTTTGTGATGAACAAGAGAGGCACTTTTTTAGCTCCAAGGAAGCAAAGTATAGAAATAGTAATCGGATGAGTAGAACAACAAAATGTGGATATTGGAAGGCAACAGGGTCAGACAAAAAAATTTCATCTTCAACTTGTAATAGCATTGTAGGGTTAAGAAAAACTCTGGTTTTCTATGAAGGGAAATCCCCAAATGGGTCTAGAACTGATTGGATCTTGCATGAATATCGCCTCGTCAATGTAGAAACTACTAACAACTCAACTCAGAACTATGGAAATGAGATAGGAGAATGGGTTCTGTGTCGGTTATCTGTGAGGAAAAGAAGTGGTTTAGAATATGGAAGTACTAGTACTCATAATGCTCCTCCTAATTCGAGATTAATGTTTGATTTTATGATGGTAAACAACAAGACATGTTCTTCTACGTCCTCTTCATGCTCAAGTTCCAGTAACAATATTGAGGTCTCTTCAAATGTACAAGATCAAGAACAAGACTATGCTGATCATTTTTAA
Protein sequence

>Msa0570920

MDKLNFIKNGVSRLPPGFRFQPTDEELVFNYLKCKIFSCPLPASIIPEVNVCKYDPWDLPGVCDEQERHFFSSKEAKYRNSNRMSRTTKCGYWKATGSDKKISSSTCNSIVGLRKTLVFYEGKSPNGSRTDWILHEYRLVNVETTNNSTQNYGNEIGEWVLCRLSVRKRSGLEYGSTSTHNAPPNSRLMFDFMMVNNKTCSSTSSSCSSSSNNIEVSSNVQDQEQDYADHF*