AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0572100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0572100 MtrunA17_Chr8g0387501 95.273 275 8 2 1 274 1 271 0.0 540
Msa0572100 MtrunA17_Chr7g0248691 42.373 236 109 7 25 240 42 270 6.03e-43 149
Msa0572100 MtrunA17_Chr8g0348311 44.809 183 84 4 49 219 70 247 1.60e-38 137
Msa0572100 MtrunA17_Chr2g0293481 50.000 140 51 4 89 212 215 351 2.88e-36 134
Msa0572100 MtrunA17_Chr1g0202461 57.265 117 44 3 99 211 225 339 6.85e-36 132
Msa0572100 MtrunA17_Chr2g0284321 56.566 99 40 1 101 196 1 99 1.83e-32 119
Msa0572100 MtrunA17_Chr7g0270051 50.000 114 50 2 91 197 5 118 1.13e-30 115
Msa0572100 MtrunA17_Chr2g0319961 56.044 91 32 1 110 192 50 140 6.46e-28 108
Msa0572100 MtrunA17_Chr8g0379461 58.904 73 30 0 133 205 77 149 1.04e-27 107
Msa0572100 MtrunA17_Chr2g0289181 54.795 73 32 1 133 204 15 87 4.63e-23 94.4
Msa0572100 MtrunA17_Chr4g0071521 51.765 85 41 0 107 191 220 304 3.61e-22 93.6
Msa0572100 MtrunA17_Chr1g0147881 50.602 83 36 2 111 189 238 319 1.42e-21 92.4
Msa0572100 MtrunA17_Chr4g0053281 47.573 103 42 3 110 208 241 335 2.36e-21 91.7
Msa0572100 MtrunA17_Chr5g0401821 51.807 83 35 2 111 189 175 256 3.51e-21 90.1
Msa0572100 MtrunA17_Chr4g0051881 50.617 81 38 2 131 210 177 256 1.74e-20 89.4
Msa0572100 MtrunA17_Chr1g0184691 54.930 71 28 1 123 189 280 350 3.02e-20 89.0
Msa0572100 MtrunA17_Chr7g0228941 59.649 57 23 0 133 189 53 109 5.46e-20 83.2
Msa0572100 MtrunA17_Chr1g0194481 50.704 71 33 2 131 200 157 226 6.11e-20 87.8
Msa0572100 MtrunA17_Chr7g0218081 46.875 96 47 3 104 197 381 474 7.77e-20 89.0
Msa0572100 MtrunA17_Chr7g0218081 47.887 71 33 3 127 195 223 291 8.64e-13 68.2
Msa0572100 MtrunA17_Chr3g0139021 48.193 83 38 2 113 191 292 373 1.71e-19 87.4
Msa0572100 MtrunA17_Chr4g0042831 46.739 92 44 3 104 195 254 340 2.78e-18 83.6
Msa0572100 MtrunA17_Chr4g0042831 43.939 66 36 1 127 192 140 204 2.39e-11 63.5
Msa0572100 MtrunA17_Chr5g0443131 55.556 63 27 1 131 193 156 217 4.08e-18 82.4
Msa0572100 MtrunA17_Chr5g0418191 49.333 75 36 2 118 192 307 379 4.42e-18 83.6
Msa0572100 MtrunA17_Chr5g0418191 45.833 72 35 3 127 196 146 215 1.51e-12 67.0
Msa0572100 MtrunA17_Chr5g0418781 41.053 95 55 1 95 189 87 180 5.39e-18 81.6
Msa0572100 MtrunA17_Chr3g0101131 46.835 79 40 2 118 196 402 478 1.36e-17 82.4
Msa0572100 MtrunA17_Chr3g0101131 44.444 72 36 3 126 195 237 306 6.07e-12 65.5
Msa0572100 MtrunA17_Chr7g0270191 50.725 69 33 1 131 199 144 211 1.89e-17 80.5
Msa0572100 MtrunA17_Chr5g0428351 34.146 164 91 4 65 223 123 274 2.03e-17 80.5
Msa0572100 MtrunA17_Chr5g0445311 44.186 86 43 3 118 200 351 434 2.25e-17 81.6
Msa0572100 MtrunA17_Chr5g0445311 47.887 71 32 4 133 201 201 268 6.95e-12 65.5
Msa0572100 MtrunA17_Chr7g0238921 38.525 122 69 3 73 189 60 180 2.81e-17 80.1
Msa0572100 MtrunA17_Chr3g0099641 35.514 107 63 1 102 202 215 321 3.03e-17 81.3
Msa0572100 MtrunA17_Chr7g0263531 47.945 73 37 1 120 192 349 420 3.36e-17 80.9
Msa0572100 MtrunA17_Chr7g0263531 52.113 71 30 3 133 201 190 258 1.49e-14 73.2
Msa0572100 MtrunA17_Chr4g0051181 39.785 93 54 1 102 192 211 303 1.42e-16 79.3
Msa0572100 MtrunA17_Chr7g0270831 44.444 72 40 0 131 202 215 286 1.51e-16 79.0
Msa0572100 MtrunA17_Chr4g0001361 44.444 81 41 1 133 213 163 239 1.52e-16 78.2
Msa0572100 MtrunA17_Chr2g0294231 48.571 70 34 2 131 199 202 270 1.73e-16 78.6
Msa0572100 MtrunA17_Chr3g0079691 46.250 80 41 2 118 197 482 559 2.06e-16 79.0
Msa0572100 MtrunA17_Chr3g0079691 48.780 82 36 5 124 202 271 349 1.45e-15 76.6
Msa0572100 MtrunA17_Chr5g0447701 45.570 79 42 1 120 198 240 317 3.13e-16 77.8
Msa0572100 MtrunA17_Chr5g0447701 48.333 60 29 2 133 192 93 150 8.56e-11 61.6
Msa0572100 MtrunA17_Chr4g0025051 45.833 72 39 0 131 202 334 405 3.28e-16 78.2
Msa0572100 MtrunA17_Chr4g0025061 40.964 83 49 0 120 202 348 430 3.79e-16 78.2
Msa0572100 MtrunA17_Chr2g0333851 38.095 105 63 1 114 216 149 253 3.81e-16 77.0
Msa0572100 MtrunA17_Chr7g0249311 46.753 77 40 1 120 196 380 455 7.72e-16 77.4
Msa0572100 MtrunA17_Chr7g0249311 49.296 71 32 3 133 201 180 248 3.15e-14 72.4
Msa0572100 MtrunA17_Chr7g0249301 48.649 74 34 3 130 201 60 131 9.43e-16 76.3
Msa0572100 MtrunA17_Chr7g0249301 44.872 78 41 2 118 195 279 354 1.56e-15 75.9
Msa0572100 MtrunA17_Chr2g0288871 48.387 62 32 0 131 192 304 365 1.08e-15 76.6
Msa0572100 MtrunA17_Chr7g0243891 40.816 98 55 3 120 217 363 457 1.45e-15 76.3
Msa0572100 MtrunA17_Chr7g0243891 39.175 97 55 3 133 227 217 311 1.94e-14 72.8
Msa0572100 MtrunA17_Chr2g0302391 42.353 85 47 1 131 213 210 294 1.99e-15 75.5
Msa0572100 MtrunA17_Chr4g0068541 47.619 63 32 1 131 193 207 268 2.54e-15 75.5
Msa0572100 MtrunA17_Chr4g0004911 44.872 78 41 2 118 195 323 398 2.68e-15 75.5
Msa0572100 MtrunA17_Chr4g0004911 48.333 60 30 1 133 192 185 243 4.26e-13 68.9
Msa0572100 MtrunA17_Chr7g0216891 42.466 73 42 0 130 202 217 289 3.97e-15 75.1
Msa0572100 MtrunA17_Chr1g0188941 39.080 87 49 3 107 193 29 111 4.82e-15 69.7
Msa0572100 MtrunA17_Chr3g0136961 27.488 211 115 6 35 217 27 227 6.87e-15 73.2
Msa0572100 MtrunA17_Chr4g0075201 48.333 60 31 0 133 192 268 327 7.26e-15 74.3
Msa0572100 MtrunA17_Chr3g0126391 44.928 69 36 1 121 187 122 190 7.83e-15 73.6
Msa0572100 MtrunA17_Chr1g0150801 35.135 111 67 2 85 191 51 160 1.00e-14 70.1
Msa0572100 MtrunA17_Chr1g0189391 42.000 100 48 4 115 205 80 178 1.19e-14 72.8
Msa0572100 MtrunA17_Chr3g0106491 41.379 87 49 2 118 204 352 436 1.26e-14 73.6
Msa0572100 MtrunA17_Chr3g0106491 47.761 67 31 3 133 197 199 263 1.44e-12 67.4
Msa0572100 MtrunA17_Chr1g0150281 49.123 57 29 0 133 189 141 197 1.27e-14 72.4
Msa0572100 MtrunA17_Chr5g0432161 38.710 93 56 1 105 197 394 485 2.78e-14 72.4
Msa0572100 MtrunA17_Chr5g0432161 48.333 60 29 2 133 192 245 302 1.33e-11 64.7
Msa0572100 MtrunA17_Chr7g0224801 50.000 60 29 1 131 190 92 150 3.04e-14 68.9
Msa0572100 MtrunA17_Chr4g0024391 48.387 62 32 0 131 192 228 289 3.46e-14 72.0
Msa0572100 MtrunA17_Chr8g0347251 38.384 99 50 2 107 194 102 200 3.48e-14 71.6
Msa0572100 MtrunA17_Chr7g0275531 43.243 74 36 2 128 195 114 187 7.94e-14 70.5
Msa0572100 MtrunA17_Chr3g0129321 48.333 60 30 1 133 192 119 177 8.11e-14 68.6
Msa0572100 MtrunA17_Chr4g0060271 46.032 63 34 0 130 192 253 315 9.98e-14 70.9
Msa0572100 MtrunA17_Chr6g0485431 42.500 80 42 3 120 196 142 220 1.07e-13 70.1
Msa0572100 MtrunA17_Chr2g0322391 45.161 62 34 0 131 192 348 409 2.16e-13 70.1
Msa0572100 MtrunA17_Chr7g0248721 49.231 65 31 2 126 190 135 197 2.77e-13 67.4
Msa0572100 MtrunA17_Chr3g0128671 39.506 81 41 2 109 187 110 184 4.16e-13 68.2
Msa0572100 MtrunA17_Chr4g0074001 44.286 70 36 2 129 196 356 424 5.12e-13 68.6
Msa0572100 MtrunA17_Chr3g0129361 45.588 68 35 2 122 189 135 200 5.69e-13 66.6
Msa0572100 MtrunA17_Chr8g0387981 37.234 94 44 2 109 187 96 189 5.78e-13 68.2
Msa0572100 MtrunA17_Chr1g0150271 46.667 60 32 0 133 192 102 161 9.05e-13 66.6
Msa0572100 MtrunA17_Chr8g0383351 47.692 65 32 2 125 189 154 216 9.25e-13 66.2
Msa0572100 MtrunA17_Chr8g0383251 46.667 60 31 1 133 192 109 167 1.85e-12 64.3
Msa0572100 MtrunA17_Chr8g0386241 40.000 75 43 2 116 190 88 160 2.34e-12 64.3
Msa0572100 MtrunA17_Chr8g0335811 49.153 59 29 1 131 189 153 210 3.05e-12 64.7
Msa0572100 MtrunA17_Chr7g0244971 49.123 57 27 1 133 187 124 180 5.05e-11 62.0
Msa0572100 MtrunA17_Chr5g0447711 34.831 89 57 1 120 208 218 305 7.83e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0572100 AT4G23550.1 49.533 214 94 6 1 203 1 211 6.96e-45 154
Msa0572100 AT4G01250.1 41.827 208 98 7 9 204 4 200 8.75e-41 143
Msa0572100 AT5G52830.1 55.372 121 49 3 111 227 145 264 3.97e-38 137
Msa0572100 AT2G34830.1 76.471 68 16 0 133 200 216 283 1.42e-33 127
Msa0572100 AT2G34830.2 76.471 68 16 0 133 200 225 292 1.61e-33 127
Msa0572100 AT1G30650.1 73.529 68 18 0 133 200 218 285 5.51e-32 122
Msa0572100 AT5G45050.1 56.842 95 41 0 106 200 1154 1248 2.10e-31 123
Msa0572100 AT5G45050.2 56.842 95 41 0 106 200 1126 1220 2.19e-31 123
Msa0572100 AT5G45050.4 56.842 95 41 0 106 200 1015 1109 2.26e-31 123
Msa0572100 AT3G58710.1 41.250 160 83 3 110 258 40 199 5.75e-31 116
Msa0572100 AT3G58710.2 39.521 167 86 3 107 258 32 198 6.97e-30 114
Msa0572100 AT1G29280.1 67.123 73 19 1 133 205 75 142 1.87e-29 112
Msa0572100 AT5G45260.1 48.515 101 49 2 106 203 1181 1281 7.83e-24 101
Msa0572100 AT2G30590.1 47.475 99 47 2 98 191 274 372 3.47e-23 97.8
Msa0572100 AT4G31550.1 46.875 96 46 2 110 201 221 315 6.60e-23 96.3
Msa0572100 AT2G24570.1 51.136 88 38 2 110 193 218 304 9.75e-22 93.2
Msa0572100 AT4G31550.2 45.263 95 47 2 111 201 221 314 1.22e-21 92.8
Msa0572100 AT5G46350.1 53.750 80 33 3 125 202 177 254 4.21e-21 91.3
Msa0572100 AT2G23320.1 46.988 83 39 2 111 189 216 297 2.24e-20 89.4
Msa0572100 AT1G29860.1 45.455 88 44 2 131 218 135 218 4.13e-20 87.8
Msa0572100 AT4G24240.1 49.398 83 37 2 111 189 257 338 5.96e-20 88.6
Msa0572100 AT4G18170.1 58.730 63 25 1 131 193 171 232 1.48e-19 87.0
Msa0572100 AT2G04880.2 34.031 191 96 6 29 195 161 345 2.14e-19 87.8
Msa0572100 AT2G04880.2 46.377 69 30 3 133 201 112 173 3.57e-11 63.5
Msa0572100 AT1G68150.1 34.746 118 75 1 96 213 201 316 4.42e-19 86.3
Msa0572100 AT2G04880.1 42.202 109 51 3 97 195 263 369 7.87e-19 86.3
Msa0572100 AT2G04880.1 35.294 102 48 5 133 229 112 200 2.30e-11 63.9
Msa0572100 AT5G28650.1 41.228 114 51 4 90 189 208 319 1.21e-18 84.7
Msa0572100 AT3G04670.1 46.875 96 42 3 101 189 226 319 1.26e-18 84.3
Msa0572100 AT2G03340.1 34.028 144 73 6 88 224 384 512 3.10e-18 84.7
Msa0572100 AT2G03340.1 29.936 157 95 4 88 240 215 360 2.15e-14 73.2
Msa0572100 AT5G49520.1 54.839 62 27 1 131 192 220 280 4.73e-18 83.6
Msa0572100 AT2G37260.2 42.222 90 51 1 100 189 235 323 4.83e-18 83.2
Msa0572100 AT2G37260.2 46.970 66 33 2 128 193 79 142 9.43e-12 64.7
Msa0572100 AT2G37260.3 42.222 90 51 1 100 189 237 325 5.01e-18 83.2
Msa0572100 AT2G37260.3 46.970 66 33 2 128 193 81 144 9.24e-12 65.1
Msa0572100 AT2G37260.1 42.222 90 51 1 100 189 317 405 6.07e-18 83.6
Msa0572100 AT2G37260.1 46.970 66 33 2 128 193 161 224 7.86e-12 65.5
Msa0572100 AT4G30935.1 37.209 129 71 5 116 241 316 437 9.67e-18 82.8
Msa0572100 AT1G13960.1 50.000 70 33 2 120 189 398 465 1.68e-17 82.4
Msa0572100 AT1G13960.1 37.624 101 55 4 102 196 195 293 2.30e-14 73.2
Msa0572100 AT2G21900.1 42.222 90 49 2 106 193 81 169 1.72e-17 79.0
Msa0572100 AT1G13960.2 49.315 73 35 2 120 192 245 315 2.26e-17 81.3
Msa0572100 AT1G13960.2 49.315 73 33 3 127 197 71 141 3.49e-14 72.0
Msa0572100 AT1G80840.1 38.462 117 56 4 113 217 117 229 2.77e-17 80.5
Msa0572100 AT3G62340.1 40.206 97 53 2 114 206 96 191 6.46e-17 79.0
Msa0572100 AT1G69310.4 38.596 114 66 3 79 189 91 203 1.08e-16 78.6
Msa0572100 AT1G69310.2 38.596 114 66 3 79 189 91 203 1.08e-16 78.6
Msa0572100 AT1G69310.1 38.596 114 66 3 79 189 91 203 1.08e-16 78.6
Msa0572100 AT4G04450.2 45.833 72 39 0 131 202 197 268 1.11e-16 79.7
Msa0572100 AT4G04450.1 45.833 72 39 0 131 202 291 362 1.23e-16 79.7
Msa0572100 AT4G26640.5 45.000 80 42 2 118 197 192 269 2.05e-16 78.6
Msa0572100 AT4G26640.5 40.000 100 48 5 103 197 8 100 9.70e-13 67.8
Msa0572100 AT4G26640.6 45.000 80 42 2 118 197 192 269 2.05e-16 78.6
Msa0572100 AT4G26640.6 40.000 100 48 5 103 197 8 100 9.70e-13 67.8
Msa0572100 AT4G26640.4 45.000 80 42 2 118 197 192 269 2.05e-16 78.6
Msa0572100 AT4G26640.4 40.000 100 48 5 103 197 8 100 9.70e-13 67.8
Msa0572100 AT4G26640.3 45.000 80 42 2 118 197 192 269 2.05e-16 78.6
Msa0572100 AT4G26640.3 40.000 100 48 5 103 197 8 100 9.70e-13 67.8
Msa0572100 AT4G26640.7 45.000 80 42 2 118 197 328 405 2.53e-16 79.0
Msa0572100 AT4G26640.7 34.127 126 67 5 74 197 125 236 2.85e-13 69.7
Msa0572100 AT4G26640.1 45.000 80 42 2 118 197 296 373 2.54e-16 79.0
Msa0572100 AT4G26640.1 34.127 126 67 5 74 197 93 204 2.77e-13 69.7
Msa0572100 AT4G26640.2 46.154 78 40 2 120 197 370 445 2.59e-16 79.0
Msa0572100 AT4G26640.2 34.127 126 67 5 74 197 165 276 2.70e-13 70.1
Msa0572100 AT5G07100.2 42.222 90 51 1 108 197 117 205 2.80e-16 76.3
Msa0572100 AT5G07100.2 40.789 76 42 2 124 197 16 90 1.62e-11 62.8
Msa0572100 AT5G07100.4 42.222 90 51 1 108 197 117 205 2.80e-16 76.3
Msa0572100 AT5G07100.4 40.789 76 42 2 124 197 16 90 1.62e-11 62.8
Msa0572100 AT5G07100.5 42.222 90 51 1 108 197 117 205 2.80e-16 76.3
Msa0572100 AT5G07100.5 40.789 76 42 2 124 197 16 90 1.62e-11 62.8
Msa0572100 AT5G07100.3 42.222 90 51 1 108 197 117 205 2.80e-16 76.3
Msa0572100 AT5G07100.3 40.789 76 42 2 124 197 16 90 1.62e-11 62.8
Msa0572100 AT2G30250.1 47.368 76 38 2 118 193 315 388 3.01e-16 78.2
Msa0572100 AT1G62300.1 48.387 62 32 0 131 192 311 372 3.39e-16 78.6
Msa0572100 AT4G26440.1 40.206 97 57 1 101 197 341 436 3.41e-16 78.6
Msa0572100 AT4G26440.1 36.735 98 58 3 133 228 179 274 2.80e-13 70.1
Msa0572100 AT5G07100.1 43.182 88 49 1 108 195 210 296 4.16e-16 77.0
Msa0572100 AT5G07100.1 40.789 76 42 2 124 197 109 183 2.94e-11 63.2
Msa0572100 AT4G22070.4 48.387 62 32 0 131 192 296 357 4.38e-16 78.2
Msa0572100 AT4G22070.3 48.387 62 32 0 131 192 296 357 4.38e-16 78.2
Msa0572100 AT4G22070.2 48.387 62 32 0 131 192 296 357 4.38e-16 78.2
Msa0572100 AT4G22070.1 48.387 62 32 0 131 192 296 357 4.38e-16 78.2
Msa0572100 AT2G47260.1 40.625 96 54 3 97 192 141 233 1.11e-15 76.3
Msa0572100 AT2G38470.1 38.596 114 62 4 120 231 351 458 1.62e-15 76.6
Msa0572100 AT2G38470.1 48.333 60 29 2 133 192 185 242 1.29e-11 65.1
Msa0572100 AT5G56270.1 46.154 78 40 2 118 195 474 549 1.71e-15 76.6
Msa0572100 AT5G56270.1 45.588 68 33 3 133 198 274 339 3.93e-12 66.6
Msa0572100 AT4G01720.1 49.206 63 32 0 130 192 237 299 4.07e-15 75.5
Msa0572100 AT1G69810.1 38.636 88 53 1 116 202 187 274 4.14e-15 75.1
Msa0572100 AT1G64000.1 50.794 63 30 1 128 190 110 171 4.88e-15 72.4
Msa0572100 AT1G69810.2 38.636 88 53 1 116 202 129 216 5.73e-15 73.9
Msa0572100 AT5G41570.1 40.964 83 48 1 108 190 74 155 6.13e-15 71.6
Msa0572100 AT5G15130.1 42.466 73 42 0 130 202 225 297 6.97e-15 74.7
Msa0572100 AT5G15130.2 42.466 73 42 0 130 202 183 255 8.17e-15 74.3
Msa0572100 AT5G26170.1 50.847 59 28 1 131 189 112 169 8.48e-15 71.2
Msa0572100 AT5G13080.1 50.000 60 29 1 131 190 66 124 8.72e-15 70.5
Msa0572100 AT1G18860.1 47.619 63 33 0 130 192 237 299 1.08e-14 73.9
Msa0572100 AT3G01080.2 45.333 75 39 2 118 192 331 403 1.22e-14 73.9
Msa0572100 AT3G01080.2 45.588 68 35 2 133 200 206 271 4.62e-13 69.3
Msa0572100 AT2G25000.2 46.032 63 34 0 130 192 101 163 1.32e-14 71.6
Msa0572100 AT2G25000.4 46.032 63 34 0 130 192 101 163 1.32e-14 71.6
Msa0572100 AT3G01080.1 45.333 75 39 2 118 192 293 365 1.48e-14 73.6
Msa0572100 AT3G01080.1 45.588 68 35 2 133 200 168 233 5.15e-13 68.9
Msa0572100 AT2G25000.3 46.032 63 34 0 130 192 123 185 2.04e-14 71.6
Msa0572100 AT2G25000.1 46.032 63 34 0 130 192 144 206 2.79e-14 71.6
Msa0572100 AT2G46130.1 42.500 80 45 1 111 190 9 87 3.86e-14 67.4
Msa0572100 AT3G56400.1 50.877 57 26 1 133 187 121 177 4.86e-14 71.2
Msa0572100 AT4G31800.2 44.444 63 35 0 130 192 109 171 4.91e-14 70.5
Msa0572100 AT4G31800.1 44.444 63 35 0 130 192 174 236 5.52e-14 71.2
Msa0572100 AT1G55600.1 37.037 81 50 1 112 192 287 366 5.63e-14 72.0
Msa0572100 AT2G46400.1 39.450 109 57 4 109 208 77 185 1.69e-13 69.7
Msa0572100 AT3G01970.1 49.153 59 29 1 131 189 64 121 2.96e-13 66.2
Msa0572100 AT3G01080.3 45.588 68 35 2 133 200 206 271 4.01e-13 68.9
Msa0572100 AT5G43290.1 42.529 87 47 2 103 189 87 170 4.66e-13 68.2
Msa0572100 AT4G39410.1 38.776 98 52 3 98 189 184 279 4.99e-13 68.2
Msa0572100 AT4G23810.1 41.379 87 48 2 126 209 152 238 7.13e-13 68.2
Msa0572100 AT2G44745.1 49.153 59 29 1 131 189 144 201 1.55e-12 65.9
Msa0572100 AT2G40740.1 38.298 94 53 2 133 221 174 267 1.76e-12 66.6
Msa0572100 AT2G40740.3 38.298 94 53 2 133 221 183 276 1.94e-12 66.6
Msa0572100 AT1G66560.1 38.947 95 55 2 133 224 104 198 2.22e-12 65.9
Msa0572100 AT4G11070.2 45.312 64 33 1 126 187 103 166 2.67e-12 65.9
Msa0572100 AT4G11070.1 45.312 64 33 1 126 187 135 198 2.77e-12 66.2
Msa0572100 AT5G64810.1 27.473 182 107 8 15 189 3 166 2.94e-12 64.7
Msa0572100 AT2G40750.1 32.031 128 61 5 133 242 153 272 3.70e-12 66.2
Msa0572100 AT5G24110.1 40.217 92 47 3 102 187 81 170 3.94e-12 65.9
Msa0572100 AT5G01900.1 52.632 57 25 1 133 187 111 167 1.46e-11 63.5
Msa0572100 AT1G69310.3 35.088 114 66 4 79 189 91 199 1.97e-11 63.5
Msa0572100 AT1G66550.2 48.387 62 28 2 130 187 99 160 2.78e-11 62.8
Msa0572100 AT1G66550.1 48.387 62 28 2 130 187 104 165 2.87e-11 62.8
Msa0572100 AT4G12020.6 44.118 68 36 2 127 194 463 528 4.11e-11 63.9
Msa0572100 AT4G12020.8 44.118 68 36 2 127 194 463 528 4.11e-11 63.9
Msa0572100 AT4G12020.1 44.118 68 36 2 127 194 463 528 4.39e-11 63.5
Msa0572100 AT4G12020.9 44.118 68 36 2 127 194 463 528 4.39e-11 63.5
Msa0572100 AT4G12020.10 44.118 68 36 2 127 194 463 528 4.53e-11 63.5
Msa0572100 AT4G12020.7 44.118 68 36 2 127 194 463 528 4.55e-11 63.5
Msa0572100 AT4G12020.3 44.118 68 36 2 127 194 463 528 4.66e-11 63.5
Msa0572100 AT4G12020.5 44.118 68 36 2 127 194 396 461 4.86e-11 63.5
Msa0572100 AT4G12020.4 44.118 68 36 2 127 194 463 528 4.97e-11 63.5
Msa0572100 AT4G12020.2 44.118 68 36 2 127 194 463 528 5.25e-11 63.5
Msa0572100 AT4G12020.11 39.080 87 46 3 127 208 463 547 5.72e-11 63.2
Msa0572100 AT1G80590.1 50.877 57 26 1 133 187 86 142 6.21e-11 61.6

Find 50 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGACTTGTTCAGGCTCTTT+AGG 0.134286 4_1:-74900318 None:intergenic
GATCATGATGAGTTATTATT+TGG 0.156073 4_1:+74900177 Msa0572100:CDS
AGAATAAAATTTGAATGATA+TGG 0.169511 4_1:+74901424 Msa0572100:three_prime_UTR
TTTGGATCCAAAAGTTTATT+TGG 0.173451 4_1:+74900903 Msa0572100:CDS
GGATGAGCTTGCATTCTTAA+TGG 0.203867 4_1:+74900083 Msa0572100:CDS
AATAAGGACATTAGTAGTTT+TGG 0.235044 4_1:-74900217 None:intergenic
ACATGCAGTGGCTGCAGTTT+TGG 0.237934 4_1:+74901209 Msa0572100:exon
TGACTTGTTCAGGCTCTTTA+GGG 0.241877 4_1:-74900317 None:intergenic
GATGAAAGTGGATAGAAATT+AGG 0.255054 4_1:-74900264 None:intergenic
TTAATTTCTTTGACTTGTTC+AGG 0.260130 4_1:-74900327 None:intergenic
GGATAAGGTGAACCCTTTAT+TGG 0.261455 4_1:-74900814 None:intergenic
GCTCTTCAAATTCATGAATA+AGG 0.283800 4_1:-74900233 None:intergenic
TCTTACTTATCTTGTAATAA+TGG 0.288869 4_1:+74900062 Msa0572100:exon
GCATGGGCATGGCGTAAATA+TGG 0.330729 4_1:+74900784 Msa0572100:CDS
TATGTAACCAAATAAACTTT+TGG 0.350399 4_1:-74900910 None:intergenic
AAAGAGCTAGAGGAACTTAT+TGG 0.359530 4_1:+74901165 Msa0572100:CDS
ATTCTTAATGGATTGGGATT+TGG 0.363394 4_1:+74900095 Msa0572100:CDS
AGCAATGTTAAATTTCTTCA+TGG 0.366703 4_1:-74901376 None:intergenic
CTAATATTGTGAGTCAGATA+TGG 0.378660 4_1:+74901328 Msa0572100:three_prime_UTR
AGTATGAAGCAACAAAATAA+AGG 0.394845 4_1:+74901066 Msa0572100:CDS
ACAAGTGGAAAAGAATCATT+TGG 0.397015 4_1:+74900885 Msa0572100:CDS
CTATAGTAGCTTCGTGGATA+AGG 0.400452 4_1:-74900829 None:intergenic
GCTTGCATTCTTAATGGATT+GGG 0.410458 4_1:+74900089 Msa0572100:CDS
AGCTTGCATTCTTAATGGAT+TGG 0.412282 4_1:+74900088 Msa0572100:CDS
CTCAATTATGTGATGATGGT+TGG 0.450519 4_1:+74901133 Msa0572100:CDS
AGTTCCTCTAGCTCTTTGCT+TGG 0.460231 4_1:-74901159 None:intergenic
GCTAATGAATTTCTTCGAGT+TGG 0.462513 4_1:-74900958 None:intergenic
TAACTCATCATGATCTTGTT+CGG 0.463938 4_1:-74900169 None:intergenic
ACTCGAAGAAATTCATTAGC+TGG 0.478608 4_1:+74900961 Msa0572100:CDS
CCAACCACTCAAGAAGATCT+TGG 0.481311 4_1:-74901104 None:intergenic
AAGAAAGTAACAGCAGTAGA+TGG 0.494362 4_1:+74900748 Msa0572100:CDS
GAATTTCTTCGAGTTGGTTG+AGG 0.496581 4_1:-74900952 None:intergenic
TAGCAGTTCTAAAGGATGTT+CGG 0.497075 4_1:+74900855 Msa0572100:CDS
GATCTTCTTGAGTGGTTGGA+TGG 0.515896 4_1:+74901108 Msa0572100:CDS
CCAAGATCTTCTTGAGTGGT+TGG 0.520742 4_1:+74901104 Msa0572100:CDS
TATAGATGTAGCAGTTCTAA+AGG 0.522420 4_1:+74900847 Msa0572100:CDS
CTACATCTATAGTAGCTTCG+TGG 0.523670 4_1:-74900835 None:intergenic
CTCTATGTGATGCATGGGCA+TGG 0.552413 4_1:+74900773 Msa0572100:CDS
GGTGCTCAATTATGTGATGA+TGG 0.555369 4_1:+74901129 Msa0572100:CDS
TTTAGTGAAAATTGAAGAGG+AGG 0.558775 4_1:+74901032 Msa0572100:CDS
AGTTGCGCACAGAGTATACT+CGG 0.570649 4_1:-74901298 None:intergenic
ATTCATTAGCTGGAAGCACT+AGG 0.572420 4_1:+74900971 Msa0572100:CDS
ATGGTACTCTATGTGATGCA+TGG 0.595047 4_1:+74900767 Msa0572100:CDS
ACCTTTAGTGAAAATTGAAG+AGG 0.596002 4_1:+74901029 Msa0572100:CDS
GATTCCAAGCAAAGAGCTAG+AGG 0.602142 4_1:+74901155 Msa0572100:CDS
AAAATGGTTTGAGATGAAAG+TGG 0.604698 4_1:-74900276 None:intergenic
ATGACCAAGATCTTCTTGAG+TGG 0.626463 4_1:+74901100 Msa0572100:CDS
TGGTACTCTATGTGATGCAT+GGG 0.630835 4_1:+74900768 Msa0572100:CDS
TAAGTGTCAATAACATGCAG+TGG 0.632098 4_1:+74901197 Msa0572100:exon
ATGTTCGGCGAAGAAACAAG+TGG 0.637909 4_1:+74900870 Msa0572100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAT+TGG - chr4_1:74900504-74900523 None:intergenic 0.0%
!! AAAAAAAAAAAAAAAAAAAT+TGG - chr4_1:74900504-74900523 None:intergenic 0.0%
!! GAAAATAAATGAGAAAAATA+AGG - chr4_1:74900150-74900169 None:intergenic 15.0%
!! AGAAAAGATTATATTACTAT+AGG - chr4_1:74900562-74900581 None:intergenic 15.0%
!!! TGTTTCAAATTTATTTTTTG+AGG + chr4_1:74900590-74900609 Msa0572100:intron 15.0%
!! AGAATAAAATTTGAATGATA+TGG + chr4_1:74901424-74901443 Msa0572100:three_prime_UTR 15.0%
!! GAAAATAAATGAGAAAAATA+AGG - chr4_1:74900150-74900169 None:intergenic 15.0%
!! AGAAAAGATTATATTACTAT+AGG - chr4_1:74900562-74900581 None:intergenic 15.0%
!!! TGTTTCAAATTTATTTTTTG+AGG + chr4_1:74900590-74900609 Msa0572100:intron 15.0%
!! AGAATAAAATTTGAATGATA+TGG + chr4_1:74901424-74901443 Msa0572100:three_prime_UTR 15.0%
!! TCTTACTTATCTTGTAATAA+TGG + chr4_1:74900062-74900081 Msa0572100:exon 20.0%
!! CAGTATCTAAGTTTAAAAAA+AGG + chr4_1:74900394-74900413 Msa0572100:CDS 20.0%
!!! GATTTAAGATTTTTATGTTG+TGG + chr4_1:74900477-74900496 Msa0572100:intron 20.0%
!!! ATTGTCTTTGTATTTTTGTT+TGG + chr4_1:74900530-74900549 Msa0572100:intron 20.0%
!!! TATGTAACCAAATAAACTTT+TGG - chr4_1:74900913-74900932 None:intergenic 20.0%
!! TCTTACTTATCTTGTAATAA+TGG + chr4_1:74900062-74900081 Msa0572100:exon 20.0%
!! CAGTATCTAAGTTTAAAAAA+AGG + chr4_1:74900394-74900413 Msa0572100:CDS 20.0%
!!! GATTTAAGATTTTTATGTTG+TGG + chr4_1:74900477-74900496 Msa0572100:intron 20.0%
!!! ATTGTCTTTGTATTTTTGTT+TGG + chr4_1:74900530-74900549 Msa0572100:intron 20.0%
!!! TATGTAACCAAATAAACTTT+TGG - chr4_1:74900913-74900932 None:intergenic 20.0%
!!! GAAAAATAAGGATTTGTTGT+TGG - chr4_1:74900138-74900157 None:intergenic 25.0%
! GATCATGATGAGTTATTATT+TGG + chr4_1:74900177-74900196 Msa0572100:CDS 25.0%
!! AATAAGGACATTAGTAGTTT+TGG - chr4_1:74900220-74900239 None:intergenic 25.0%
!!! TTAATTTCTTTGACTTGTTC+AGG - chr4_1:74900330-74900349 None:intergenic 25.0%
!! TTTTTAAACTTAGATACTGC+TGG - chr4_1:74900393-74900412 None:intergenic 25.0%
! CGTTATAATCATTTGCATAT+TGG + chr4_1:74900429-74900448 Msa0572100:intron 25.0%
!!! TATTTTTTGAGGAAACCTAA+TGG + chr4_1:74900601-74900620 Msa0572100:intron 25.0%
!! CGGATATAGAATTTTCTATT+TGG + chr4_1:74900657-74900676 Msa0572100:intron 25.0%
! ATATGGACAAAAACCAATAA+AGG + chr4_1:74900801-74900820 Msa0572100:CDS 25.0%
! TATGGACAAAAACCAATAAA+GGG + chr4_1:74900802-74900821 Msa0572100:CDS 25.0%
! TTTGGATCCAAAAGTTTATT+TGG + chr4_1:74900903-74900922 Msa0572100:CDS 25.0%
! AGTATGAAGCAACAAAATAA+AGG + chr4_1:74901066-74901085 Msa0572100:CDS 25.0%
! AGCAATGTTAAATTTCTTCA+TGG - chr4_1:74901379-74901398 None:intergenic 25.0%
!!! GAAAAATAAGGATTTGTTGT+TGG - chr4_1:74900138-74900157 None:intergenic 25.0%
! GATCATGATGAGTTATTATT+TGG + chr4_1:74900177-74900196 Msa0572100:CDS 25.0%
!! AATAAGGACATTAGTAGTTT+TGG - chr4_1:74900220-74900239 None:intergenic 25.0%
!!! TTAATTTCTTTGACTTGTTC+AGG - chr4_1:74900330-74900349 None:intergenic 25.0%
!! TTTTTAAACTTAGATACTGC+TGG - chr4_1:74900393-74900412 None:intergenic 25.0%
! CGTTATAATCATTTGCATAT+TGG + chr4_1:74900429-74900448 Msa0572100:intron 25.0%
!!! TATTTTTTGAGGAAACCTAA+TGG + chr4_1:74900601-74900620 Msa0572100:intron 25.0%
!! CGGATATAGAATTTTCTATT+TGG + chr4_1:74900657-74900676 Msa0572100:intron 25.0%
! ATATGGACAAAAACCAATAA+AGG + chr4_1:74900801-74900820 Msa0572100:CDS 25.0%
! TATGGACAAAAACCAATAAA+GGG + chr4_1:74900802-74900821 Msa0572100:CDS 25.0%
! TTTGGATCCAAAAGTTTATT+TGG + chr4_1:74900903-74900922 Msa0572100:CDS 25.0%
! AGTATGAAGCAACAAAATAA+AGG + chr4_1:74901066-74901085 Msa0572100:CDS 25.0%
! AGCAATGTTAAATTTCTTCA+TGG - chr4_1:74901379-74901398 None:intergenic 25.0%
!! ATTCTTAATGGATTGGGATT+TGG + chr4_1:74900095-74900114 Msa0572100:CDS 30.0%
TAACTCATCATGATCTTGTT+CGG - chr4_1:74900172-74900191 None:intergenic 30.0%
!!! TTAGTAGTTTTGGAGAATTC+TGG - chr4_1:74900210-74900229 None:intergenic 30.0%
GCTCTTCAAATTCATGAATA+AGG - chr4_1:74900236-74900255 None:intergenic 30.0%
GATGAAAGTGGATAGAAATT+AGG - chr4_1:74900267-74900286 None:intergenic 30.0%
! AAAATGGTTTGAGATGAAAG+TGG - chr4_1:74900279-74900298 None:intergenic 30.0%
! AAGCTTTAATTAACCCTAAG+CGG + chr4_1:74900637-74900656 Msa0572100:intron 30.0%
GAAAATTCTATATCCGCTTA+GGG - chr4_1:74900653-74900672 None:intergenic 30.0%
AGAAAATTCTATATCCGCTT+AGG - chr4_1:74900654-74900673 None:intergenic 30.0%
! TATAGATGTAGCAGTTCTAA+AGG + chr4_1:74900847-74900866 Msa0572100:CDS 30.0%
ACAAGTGGAAAAGAATCATT+TGG + chr4_1:74900885-74900904 Msa0572100:CDS 30.0%
ACCTTTAGTGAAAATTGAAG+AGG + chr4_1:74901029-74901048 Msa0572100:CDS 30.0%
! TCCTCTTCAATTTTCACTAA+AGG - chr4_1:74901033-74901052 None:intergenic 30.0%
TTTAGTGAAAATTGAAGAGG+AGG + chr4_1:74901032-74901051 Msa0572100:CDS 30.0%
CTAATATTGTGAGTCAGATA+TGG + chr4_1:74901328-74901347 Msa0572100:three_prime_UTR 30.0%
!! ATTCTTAATGGATTGGGATT+TGG + chr4_1:74900095-74900114 Msa0572100:CDS 30.0%
TAACTCATCATGATCTTGTT+CGG - chr4_1:74900172-74900191 None:intergenic 30.0%
!!! TTAGTAGTTTTGGAGAATTC+TGG - chr4_1:74900210-74900229 None:intergenic 30.0%
GCTCTTCAAATTCATGAATA+AGG - chr4_1:74900236-74900255 None:intergenic 30.0%
GATGAAAGTGGATAGAAATT+AGG - chr4_1:74900267-74900286 None:intergenic 30.0%
! AAAATGGTTTGAGATGAAAG+TGG - chr4_1:74900279-74900298 None:intergenic 30.0%
! AAGCTTTAATTAACCCTAAG+CGG + chr4_1:74900637-74900656 Msa0572100:intron 30.0%
GAAAATTCTATATCCGCTTA+GGG - chr4_1:74900653-74900672 None:intergenic 30.0%
AGAAAATTCTATATCCGCTT+AGG - chr4_1:74900654-74900673 None:intergenic 30.0%
! TATAGATGTAGCAGTTCTAA+AGG + chr4_1:74900847-74900866 Msa0572100:CDS 30.0%
ACAAGTGGAAAAGAATCATT+TGG + chr4_1:74900885-74900904 Msa0572100:CDS 30.0%
ACCTTTAGTGAAAATTGAAG+AGG + chr4_1:74901029-74901048 Msa0572100:CDS 30.0%
! TCCTCTTCAATTTTCACTAA+AGG - chr4_1:74901033-74901052 None:intergenic 30.0%
TTTAGTGAAAATTGAAGAGG+AGG + chr4_1:74901032-74901051 Msa0572100:CDS 30.0%
CTAATATTGTGAGTCAGATA+TGG + chr4_1:74901328-74901347 Msa0572100:three_prime_UTR 30.0%
! AGCTTGCATTCTTAATGGAT+TGG + chr4_1:74900088-74900107 Msa0572100:CDS 35.0%
!! GCTTGCATTCTTAATGGATT+GGG + chr4_1:74900089-74900108 Msa0572100:CDS 35.0%
TTGACTTACACTTGTCCATT+AGG - chr4_1:74900619-74900638 None:intergenic 35.0%
AAGAAAGTAACAGCAGTAGA+TGG + chr4_1:74900748-74900767 Msa0572100:CDS 35.0%
!! TAGCAGTTCTAAAGGATGTT+CGG + chr4_1:74900855-74900874 Msa0572100:CDS 35.0%
GCTAATGAATTTCTTCGAGT+TGG - chr4_1:74900961-74900980 None:intergenic 35.0%
ACTCGAAGAAATTCATTAGC+TGG + chr4_1:74900961-74900980 Msa0572100:CDS 35.0%
!! CTCAATTATGTGATGATGGT+TGG + chr4_1:74901133-74901152 Msa0572100:CDS 35.0%
AAAGAGCTAGAGGAACTTAT+TGG + chr4_1:74901165-74901184 Msa0572100:CDS 35.0%
TAAGTGTCAATAACATGCAG+TGG + chr4_1:74901197-74901216 Msa0572100:exon 35.0%
! AGCTTGCATTCTTAATGGAT+TGG + chr4_1:74900088-74900107 Msa0572100:CDS 35.0%
!! GCTTGCATTCTTAATGGATT+GGG + chr4_1:74900089-74900108 Msa0572100:CDS 35.0%
TTGACTTACACTTGTCCATT+AGG - chr4_1:74900619-74900638 None:intergenic 35.0%
AAGAAAGTAACAGCAGTAGA+TGG + chr4_1:74900748-74900767 Msa0572100:CDS 35.0%
!! TAGCAGTTCTAAAGGATGTT+CGG + chr4_1:74900855-74900874 Msa0572100:CDS 35.0%
GCTAATGAATTTCTTCGAGT+TGG - chr4_1:74900961-74900980 None:intergenic 35.0%
ACTCGAAGAAATTCATTAGC+TGG + chr4_1:74900961-74900980 Msa0572100:CDS 35.0%
!! CTCAATTATGTGATGATGGT+TGG + chr4_1:74901133-74901152 Msa0572100:CDS 35.0%
AAAGAGCTAGAGGAACTTAT+TGG + chr4_1:74901165-74901184 Msa0572100:CDS 35.0%
TAAGTGTCAATAACATGCAG+TGG + chr4_1:74901197-74901216 Msa0572100:exon 35.0%
GGATGAGCTTGCATTCTTAA+TGG + chr4_1:74900083-74900102 Msa0572100:CDS 40.0%
AGCGAGAGAGCTTGTAAAAA+TGG - chr4_1:74900295-74900314 None:intergenic 40.0%
!! TGACTTGTTCAGGCTCTTTA+GGG - chr4_1:74900320-74900339 None:intergenic 40.0%
!! TTGACTTGTTCAGGCTCTTT+AGG - chr4_1:74900321-74900340 None:intergenic 40.0%
ATGGTACTCTATGTGATGCA+TGG + chr4_1:74900767-74900786 Msa0572100:CDS 40.0%
TGGTACTCTATGTGATGCAT+GGG + chr4_1:74900768-74900787 Msa0572100:CDS 40.0%
GGATAAGGTGAACCCTTTAT+TGG - chr4_1:74900817-74900836 None:intergenic 40.0%
CTATAGTAGCTTCGTGGATA+AGG - chr4_1:74900832-74900851 None:intergenic 40.0%
CTACATCTATAGTAGCTTCG+TGG - chr4_1:74900838-74900857 None:intergenic 40.0%
!! GAATTTCTTCGAGTTGGTTG+AGG - chr4_1:74900955-74900974 None:intergenic 40.0%
!! ATTCATTAGCTGGAAGCACT+AGG + chr4_1:74900971-74900990 Msa0572100:CDS 40.0%
ATGACCAAGATCTTCTTGAG+TGG + chr4_1:74901100-74901119 Msa0572100:CDS 40.0%
GGTGCTCAATTATGTGATGA+TGG + chr4_1:74901129-74901148 Msa0572100:CDS 40.0%
GGATGAGCTTGCATTCTTAA+TGG + chr4_1:74900083-74900102 Msa0572100:CDS 40.0%
AGCGAGAGAGCTTGTAAAAA+TGG - chr4_1:74900295-74900314 None:intergenic 40.0%
!! TGACTTGTTCAGGCTCTTTA+GGG - chr4_1:74900320-74900339 None:intergenic 40.0%
!! TTGACTTGTTCAGGCTCTTT+AGG - chr4_1:74900321-74900340 None:intergenic 40.0%
ATGGTACTCTATGTGATGCA+TGG + chr4_1:74900767-74900786 Msa0572100:CDS 40.0%
TGGTACTCTATGTGATGCAT+GGG + chr4_1:74900768-74900787 Msa0572100:CDS 40.0%
GGATAAGGTGAACCCTTTAT+TGG - chr4_1:74900817-74900836 None:intergenic 40.0%
CTATAGTAGCTTCGTGGATA+AGG - chr4_1:74900832-74900851 None:intergenic 40.0%
CTACATCTATAGTAGCTTCG+TGG - chr4_1:74900838-74900857 None:intergenic 40.0%
!! GAATTTCTTCGAGTTGGTTG+AGG - chr4_1:74900955-74900974 None:intergenic 40.0%
!! ATTCATTAGCTGGAAGCACT+AGG + chr4_1:74900971-74900990 Msa0572100:CDS 40.0%
ATGACCAAGATCTTCTTGAG+TGG + chr4_1:74901100-74901119 Msa0572100:CDS 40.0%
GGTGCTCAATTATGTGATGA+TGG + chr4_1:74901129-74901148 Msa0572100:CDS 40.0%
ATGTTCGGCGAAGAAACAAG+TGG + chr4_1:74900870-74900889 Msa0572100:CDS 45.0%
CCAACCACTCAAGAAGATCT+TGG - chr4_1:74901107-74901126 None:intergenic 45.0%
CCAAGATCTTCTTGAGTGGT+TGG + chr4_1:74901104-74901123 Msa0572100:CDS 45.0%
GATCTTCTTGAGTGGTTGGA+TGG + chr4_1:74901108-74901127 Msa0572100:CDS 45.0%
GATTCCAAGCAAAGAGCTAG+AGG + chr4_1:74901155-74901174 Msa0572100:CDS 45.0%
!! AGTTCCTCTAGCTCTTTGCT+TGG - chr4_1:74901162-74901181 None:intergenic 45.0%
AGTTGCGCACAGAGTATACT+CGG - chr4_1:74901301-74901320 None:intergenic 45.0%
ATGTTCGGCGAAGAAACAAG+TGG + chr4_1:74900870-74900889 Msa0572100:CDS 45.0%
CCAACCACTCAAGAAGATCT+TGG - chr4_1:74901107-74901126 None:intergenic 45.0%
CCAAGATCTTCTTGAGTGGT+TGG + chr4_1:74901104-74901123 Msa0572100:CDS 45.0%
GATCTTCTTGAGTGGTTGGA+TGG + chr4_1:74901108-74901127 Msa0572100:CDS 45.0%
GATTCCAAGCAAAGAGCTAG+AGG + chr4_1:74901155-74901174 Msa0572100:CDS 45.0%
!! AGTTCCTCTAGCTCTTTGCT+TGG - chr4_1:74901162-74901181 None:intergenic 45.0%
AGTTGCGCACAGAGTATACT+CGG - chr4_1:74901301-74901320 None:intergenic 45.0%
CTCTATGTGATGCATGGGCA+TGG + chr4_1:74900773-74900792 Msa0572100:CDS 50.0%
GCATGGGCATGGCGTAAATA+TGG + chr4_1:74900784-74900803 Msa0572100:CDS 50.0%
! ACATGCAGTGGCTGCAGTTT+TGG + chr4_1:74901209-74901228 Msa0572100:exon 50.0%
CTCTATGTGATGCATGGGCA+TGG + chr4_1:74900773-74900792 Msa0572100:CDS 50.0%
GCATGGGCATGGCGTAAATA+TGG + chr4_1:74900784-74900803 Msa0572100:CDS 50.0%
! ACATGCAGTGGCTGCAGTTT+TGG + chr4_1:74901209-74901228 Msa0572100:exon 50.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 74900056 74901478 74900056 ID=Msa0572100;Name=Msa0572100
chr4_1 mRNA 74900056 74901478 74900056 ID=Msa0572100-mRNA-1;Parent=Msa0572100;Name=Msa0572100-mRNA-1;_AED=0.00;_eAED=0.00;_QI=25|1|1|1|1|1|2|269|274
chr4_1 exon 74900056 74900415 74900056 ID=Msa0572100-mRNA-1:exon:25894;Parent=Msa0572100-mRNA-1
chr4_1 exon 74900720 74901478 74900720 ID=Msa0572100-mRNA-1:exon:25895;Parent=Msa0572100-mRNA-1
chr4_1 five_prime_UTR 74900056 74900080 74900056 ID=Msa0572100-mRNA-1:five_prime_utr;Parent=Msa0572100-mRNA-1
chr4_1 CDS 74900081 74900415 74900081 ID=Msa0572100-mRNA-1:cds;Parent=Msa0572100-mRNA-1
chr4_1 CDS 74900720 74901209 74900720 ID=Msa0572100-mRNA-1:cds;Parent=Msa0572100-mRNA-1
chr4_1 three_prime_UTR 74901210 74901478 74901210 ID=Msa0572100-mRNA-1:three_prime_utr;Parent=Msa0572100-mRNA-1
Gene Sequence

>Msa0572100

ATGGATGAGCTTGCATTCTTAATGGATTGGGATTTGGAAGCTATCAGTGAAGTACCAACAACAAATCCTTATTTTTCTCATTTATTTTCCGAACAAGATCATGATGAGTTATTATTTGGAAGTTTTCCAGAATTCTCCAAAACTACTAATGTCCTTATTCATGAATTTGAAGAGCTTTGCAAACCTAATTTCTATCCACTTTCATCTCAAACCATTTTTACAAGCTCTCTCGCTAACCCTAAAGAGCCTGAACAAGTCAAAGAAATTAAAGCAGCAGACAAAGTAGCTTCTCATCAAGATCTGCAAGTTCCAGCAGTATCTAAGTTTAAAAAAAGCAAGAAAAACAAGAACAAGAGTGTTGTGAAGAAAGTAACAGCAGTAGATGGTACTCTATGTGATGCATGGGCATGGCGTAAATATGGACAAAAACCAATAAAGGGTTCACCTTATCCACGAAGCTACTATAGATGTAGCAGTTCTAAAGGATGTTCGGCGAAGAAACAAGTGGAAAAGAATCATTTGGATCCAAAAGTTTATTTGGTTACATACACTGCAGAACACAATCATCCTCAACCAACTCGAAGAAATTCATTAGCTGGAAGCACTAGGAAGAACAATATCTTAGTTACACATTCTTCAAAGACACCTTTAGTGAAAATTGAAGAGGAGGTAAATGTGACAAGTATGAAGCAACAAAATAAAGGATTTGAGAAAGATGACCAAGATCTTCTTGAGTGGTTGGATGGTGCTCAATTATGTGATGATGGTTGGATTCCAAGCAAAGAGCTAGAGGAACTTATTGGACTTGAGAATAAGTGTCAATAA
Protein sequence

>Msa0572100

MDELAFLMDWDLEAISEVPTTNPYFSHLFSEQDHDELLFGSFPEFSKTTNVLIHEFEELCKPNFYPLSSQTIFTSSLANPKEPEQVKEIKAADKVASHQDLQVPAVSKFKKSKKNKNKSVVKKVTAVDGTLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSAKKQVEKNHLDPKVYLVTYTAEHNHPQPTRRNSLAGSTRKNNILVTHSSKTPLVKIEEEVNVTSMKQQNKGFEKDDQDLLEWLDGAQLCDDGWIPSKELEELIGLENKCQ*