AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0573280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573280 MtrunA17_Chr8g0389081 96.080 1097 20 3 1 1074 1 1097 0.0 2162
Msa0573280 MtrunA17_Chr4g0070181 66.456 474 129 8 20 469 15 482 0.0 600
Msa0573280 MtrunA17_Chr2g0285461 56.319 451 162 9 14 436 6 449 6.12e-155 483
Msa0573280 MtrunA17_Chr2g0285461 46.243 173 78 3 892 1061 708 868 1.78e-34 142
Msa0573280 MtrunA17_Chr8g0376771 52.745 510 198 11 14 499 6 496 8.52e-155 483
Msa0573280 MtrunA17_Chr8g0376771 66.667 93 31 0 962 1054 781 873 1.80e-34 142
Msa0573280 MtrunA17_Chr3g0109391 58.124 437 153 9 28 438 23 455 2.65e-152 474
Msa0573280 MtrunA17_Chr3g0109391 64.773 88 31 0 963 1050 724 811 4.85e-31 131
Msa0573280 MtrunA17_Chr5g0433301 54.661 472 174 12 19 459 15 477 2.47e-148 464
Msa0573280 MtrunA17_Chr5g0433301 63.218 87 32 0 964 1050 717 803 1.99e-30 129
Msa0573280 MtrunA17_Chr1g0156321 61.749 366 117 3 28 372 40 403 1.02e-146 460
Msa0573280 MtrunA17_Chr1g0156321 40.291 206 99 6 868 1054 646 846 1.02e-34 143
Msa0573280 MtrunA17_Chr8g0385791 48.108 370 166 5 25 370 53 420 5.31e-109 359
Msa0573280 MtrunA17_Chr8g0385791 43.860 114 59 4 962 1074 710 819 2.02e-19 94.4
Msa0573280 MtrunA17_Chr2g0276781 47.804 387 159 10 13 369 6 379 1.21e-104 343
Msa0573280 MtrunA17_Chr2g0276781 45.000 100 53 2 953 1051 538 636 6.49e-20 95.5
Msa0573280 MtrunA17_Chr8g0346711 48.056 360 152 9 17 348 10 362 8.26e-99 327
Msa0573280 MtrunA17_Chr8g0346711 47.253 91 45 2 961 1050 557 645 7.39e-19 92.0
Msa0573280 MtrunA17_Chr4g0046371 45.600 375 167 8 2 345 9 377 1.03e-94 317
Msa0573280 MtrunA17_Chr2g0282961 48.105 343 153 5 26 345 48 388 5.04e-94 312
Msa0573280 MtrunA17_Chr4g0009751 45.000 380 179 9 26 380 14 388 2.28e-91 305
Msa0573280 MtrunA17_Chr4g0009751 47.826 69 33 2 962 1029 555 621 4.33e-12 70.5
Msa0573280 MtrunA17_Chr4g0029671 44.959 367 165 9 31 364 54 416 2.81e-88 301
Msa0573280 MtrunA17_Chr4g0029671 47.826 92 46 2 962 1052 663 753 1.01e-21 101
Msa0573280 MtrunA17_Chr2g0326281 44.751 362 154 8 31 348 56 415 8.95e-84 290
Msa0573280 MtrunA17_Chr2g0326281 47.826 92 46 2 962 1052 695 785 5.90e-21 99.4
Msa0573280 MtrunA17_Chr7g0239061 43.443 366 174 11 31 370 14 372 1.09e-81 280
Msa0573280 MtrunA17_Chr7g0239061 49.451 91 43 2 962 1051 570 658 4.24e-19 92.8
Msa0573280 MtrunA17_Chr2g0326761 38.653 401 187 8 28 371 8 406 8.45e-73 256
Msa0573280 MtrunA17_Chr1g0199681 36.643 423 208 11 10 378 73 489 8.97e-72 253
Msa0573280 MtrunA17_Chr4g0028971 37.905 401 188 8 21 362 2 400 2.73e-70 249
Msa0573280 MtrunA17_Chr1g0181211 37.722 395 185 6 28 362 24 417 8.69e-70 247
Msa0573280 MtrunA17_Chr7g0264171 36.983 411 186 11 28 370 28 433 3.67e-66 235
Msa0573280 MtrunA17_Chr3g0115271 36.061 391 196 9 23 361 11 399 1.72e-61 221
Msa0573280 MtrunA17_Chr7g0264161 41.786 280 154 5 50 324 26 301 3.49e-59 205
Msa0573280 MtrunA17_Chr2g0301251 41.351 370 166 16 712 1074 774 1099 1.81e-56 213
Msa0573280 MtrunA17_Chr8g0356211 41.304 230 127 4 122 349 2 225 1.65e-52 187
Msa0573280 MtrunA17_Chr5g0417281 34.140 372 200 13 28 374 8 359 2.50e-50 186
Msa0573280 MtrunA17_Chr5g0424931 33.161 386 194 14 28 364 16 386 2.60e-50 187
Msa0573280 MtrunA17_Chr1g0178011 32.011 378 211 12 28 375 9 370 1.17e-45 171
Msa0573280 MtrunA17_Chr5g0436761 33.815 346 188 12 28 347 9 339 4.59e-43 164
Msa0573280 MtrunA17_Chr2g0289221 32.059 340 179 14 13 324 6 321 3.39e-42 158
Msa0573280 MtrunA17_Chr5g0417211 30.838 334 166 11 28 324 9 314 8.88e-38 147
Msa0573280 MtrunA17_Chr2g0277461 30.387 362 210 14 28 364 10 354 2.20e-37 147
Msa0573280 MtrunA17_Chr2g0277531 28.875 329 175 14 28 324 17 318 2.17e-30 122
Msa0573280 MtrunA17_Chr5g0425661 31.429 210 107 5 28 210 34 233 1.45e-27 112
Msa0573280 MtrunA17_Chr5g0424741 25.205 365 222 7 28 344 9 370 1.04e-26 115
Msa0573280 MtrunA17_Chr5g0424801 26.554 354 196 10 28 344 9 335 3.42e-25 108
Msa0573280 MtrunA17_Chr5g0425261 26.462 359 200 10 28 349 9 340 4.95e-24 105
Msa0573280 MtrunA17_Chr1g0156301 33.010 206 98 7 868 1054 69 253 1.81e-22 98.6
Msa0573280 MtrunA17_Chr1g0156311 42.478 113 32 3 232 344 1 80 7.73e-15 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573280 AT5G20730.2 65.342 453 125 8 20 445 16 463 0.0 573
Msa0573280 AT5G20730.2 60.753 186 62 4 890 1074 974 1149 7.18e-56 212
Msa0573280 AT5G20730.3 65.198 454 125 9 20 445 16 464 0.0 568
Msa0573280 AT5G20730.3 60.773 181 60 4 890 1069 975 1145 1.39e-54 208
Msa0573280 AT5G20730.1 65.198 454 125 9 20 445 16 464 0.0 568
Msa0573280 AT5G20730.1 60.753 186 62 4 890 1074 975 1150 8.59e-56 212
Msa0573280 AT1G30330.3 54.316 475 170 11 28 468 22 483 2.67e-150 473
Msa0573280 AT1G30330.3 55.118 127 53 1 928 1054 766 888 1.46e-34 143
Msa0573280 AT1G30330.2 54.316 475 170 11 28 468 22 483 2.67e-150 473
Msa0573280 AT1G30330.2 55.118 127 53 1 928 1054 766 888 1.46e-34 143
Msa0573280 AT1G30330.1 54.316 475 170 11 28 468 20 481 2.76e-150 472
Msa0573280 AT1G30330.1 55.118 127 53 1 928 1054 764 886 1.53e-34 143
Msa0573280 AT1G19850.1 56.713 432 156 7 28 436 51 474 7.46e-144 454
Msa0573280 AT1G19850.1 68.421 95 30 0 960 1054 791 885 2.79e-35 145
Msa0573280 AT1G19850.2 56.713 432 156 7 28 436 40 463 8.00e-144 454
Msa0573280 AT1G19850.2 68.421 95 30 0 960 1054 780 874 3.03e-35 145
Msa0573280 AT5G37020.2 55.204 442 162 9 28 440 19 453 1.04e-143 450
Msa0573280 AT5G37020.2 60.870 69 27 0 962 1030 705 773 2.96e-22 103
Msa0573280 AT5G37020.1 55.204 442 162 9 28 440 19 453 2.60e-143 450
Msa0573280 AT5G37020.1 60.000 100 39 1 962 1061 705 803 1.38e-31 134
Msa0573280 AT5G37020.3 56.986 365 142 7 84 440 1 358 2.48e-119 384
Msa0573280 AT5G37020.3 60.000 100 39 1 962 1061 610 708 8.24e-32 134
Msa0573280 AT5G62000.2 49.198 374 156 7 25 370 55 422 2.78e-110 363
Msa0573280 AT5G62000.2 46.667 90 46 2 962 1050 733 821 6.35e-18 90.1
Msa0573280 AT5G62000.5 49.198 374 156 7 25 370 55 422 2.78e-110 363
Msa0573280 AT5G62000.5 46.667 90 46 2 962 1050 733 821 6.35e-18 90.1
Msa0573280 AT5G62000.3 49.198 374 156 7 25 370 55 422 2.78e-110 363
Msa0573280 AT5G62000.3 46.667 90 46 2 962 1050 733 821 6.35e-18 90.1
Msa0573280 AT5G62000.1 49.198 374 156 7 25 370 55 422 2.78e-110 363
Msa0573280 AT5G62000.1 46.667 90 46 2 962 1050 733 821 6.35e-18 90.1
Msa0573280 AT5G62000.4 49.198 374 156 7 25 370 55 422 4.01e-110 363
Msa0573280 AT5G62000.4 46.667 90 46 2 962 1050 733 821 8.97e-18 89.4
Msa0573280 AT1G59750.1 49.062 373 157 8 26 369 12 380 9.46e-105 343
Msa0573280 AT1G59750.1 45.000 100 53 2 953 1051 533 631 4.61e-19 93.2
Msa0573280 AT1G59750.3 49.062 373 157 8 26 369 12 380 9.46e-105 343
Msa0573280 AT1G59750.3 45.000 100 53 2 953 1051 533 631 4.61e-19 93.2
Msa0573280 AT1G59750.4 49.062 373 157 8 26 369 12 380 9.98e-105 343
Msa0573280 AT1G59750.4 45.000 100 53 2 953 1051 528 626 4.76e-19 93.2
Msa0573280 AT1G59750.2 49.062 373 157 8 26 369 12 380 1.38e-104 343
Msa0573280 AT1G59750.2 45.000 100 53 2 953 1051 530 628 5.04e-19 93.2
Msa0573280 AT5G60450.2 48.913 368 151 9 28 363 38 400 1.87e-95 321
Msa0573280 AT5G60450.2 38.158 152 88 5 903 1053 586 732 2.14e-19 94.7
Msa0573280 AT5G60450.1 48.913 368 151 9 28 363 62 424 3.03e-95 321
Msa0573280 AT5G60450.1 38.158 152 88 5 903 1053 610 756 2.31e-19 94.7
Msa0573280 AT4G23980.2 46.494 385 177 8 24 384 3 382 4.62e-95 316
Msa0573280 AT4G23980.2 46.154 91 46 2 962 1051 521 609 2.11e-17 87.8
Msa0573280 AT4G23980.1 48.087 366 161 8 24 365 3 363 7.31e-95 316
Msa0573280 AT4G23980.1 46.154 91 46 2 962 1051 523 611 2.12e-17 87.8
Msa0573280 AT2G33860.1 46.647 343 158 6 26 345 49 389 1.21e-92 309
Msa0573280 AT2G46530.1 46.197 355 162 8 24 356 14 361 1.50e-92 308
Msa0573280 AT2G46530.1 39.416 137 75 4 928 1058 454 588 3.38e-17 87.0
Msa0573280 AT2G46530.3 46.197 355 162 8 24 356 35 382 4.47e-92 308
Msa0573280 AT2G46530.3 39.416 137 75 4 928 1058 475 609 4.02e-17 87.0
Msa0573280 AT3G61830.1 46.356 343 156 7 28 348 22 358 1.82e-89 300
Msa0573280 AT3G61830.1 44.681 94 49 2 959 1051 486 577 1.18e-15 82.0
Msa0573280 AT3G61830.2 49.329 298 145 5 51 348 16 307 6.00e-85 286
Msa0573280 AT3G61830.2 44.681 94 49 2 959 1051 435 526 8.39e-16 82.4
Msa0573280 AT1G35240.1 40.934 364 187 6 22 365 18 373 1.91e-81 278
Msa0573280 AT1G35240.1 41.935 93 51 2 957 1048 492 582 1.21e-14 79.0
Msa0573280 AT1G34410.1 40.934 364 187 6 22 365 18 373 2.24e-81 278
Msa0573280 AT1G34410.1 43.011 93 50 2 957 1048 506 596 6.19e-15 79.7
Msa0573280 AT1G35520.1 40.659 364 188 6 22 365 18 373 5.88e-80 273
Msa0573280 AT1G35520.1 43.023 86 46 2 957 1041 506 589 1.70e-14 78.6
Msa0573280 AT1G35540.1 40.385 364 189 6 22 365 18 373 1.39e-79 273
Msa0573280 AT1G35540.1 41.053 95 53 2 957 1050 505 597 6.65e-16 82.8
Msa0573280 AT1G34310.1 40.659 364 188 6 22 365 18 373 8.29e-78 267
Msa0573280 AT1G34310.1 44.186 86 45 2 957 1041 506 589 1.79e-14 78.2
Msa0573280 AT1G34390.1 41.209 364 184 7 22 365 18 371 5.02e-77 265
Msa0573280 AT1G34390.1 41.379 87 48 2 957 1042 504 588 1.65e-13 75.1
Msa0573280 AT2G33860.2 52.586 232 109 1 114 345 2 232 1.64e-75 256
Msa0573280 AT2G46530.2 51.004 249 117 4 108 356 31 274 1.92e-75 258
Msa0573280 AT2G46530.2 39.416 137 75 4 928 1058 367 501 2.10e-17 87.4
Msa0573280 AT1G34170.1 40.476 336 170 7 31 344 25 352 6.36e-73 251
Msa0573280 AT4G30080.1 38.313 415 190 13 27 385 15 419 1.07e-68 244
Msa0573280 AT2G28350.2 38.250 400 183 9 28 366 7 403 3.16e-68 242
Msa0573280 AT2G28350.1 38.250 400 183 9 28 366 7 403 6.05e-68 242
Msa0573280 AT1G34170.2 37.202 336 155 6 31 344 25 326 1.45e-64 227
Msa0573280 AT1G34170.3 37.202 336 155 6 31 344 25 326 1.14e-63 226
Msa0573280 AT1G34170.3 38.710 93 54 2 965 1056 436 526 3.39e-13 73.9
Msa0573280 AT1G77850.1 36.634 404 195 13 17 367 6 401 1.37e-60 218
Msa0573280 AT1G77850.2 36.634 404 195 13 17 367 6 401 1.85e-60 218
Msa0573280 AT1G19220.1 41.579 380 170 15 707 1074 731 1070 6.08e-55 209
Msa0573280 AT1G43950.1 37.736 212 105 5 22 213 18 222 3.17e-36 137
Msa0573280 AT3G25730.1 35.593 118 72 3 98 211 167 284 1.88e-11 67.4

Find 324 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAGCTTAGATGGAGATTT+TGG 0.181242 4_1:-76392113 Msa0573280:CDS
CAGTTTCAACAGACTATAAT+TGG 0.188805 4_1:-76393898 Msa0573280:CDS
CAAGAAACCACTATCATTTA+TGG 0.212163 4_1:+76392703 None:intergenic
TTCTCTTCGGGAGGCTTGCT+TGG 0.218621 4_1:-76392827 Msa0573280:CDS
CAAGGCTTAACATCATAATT+TGG 0.241797 4_1:+76393190 None:intergenic
CATAAATGATAGTGGTTTCT+TGG 0.243606 4_1:-76392702 Msa0573280:CDS
ATTATCATTGTTGTTCAAAA+AGG 0.248695 4_1:-76391968 Msa0573280:three_prime_UTR
ATCGAATTAAAGGTCATATC+AGG 0.253718 4_1:+76392734 None:intergenic
TCCGGGTTGTCTTGGTCTCT+TGG 0.260299 4_1:+76394557 None:intergenic
TCTCTTCGGGAGGCTTGCTT+GGG 0.266675 4_1:-76392826 Msa0573280:CDS
TCTTGAAAGGTGGGGCCTTT+TGG 0.267326 4_1:-76391655 Msa0573280:three_prime_UTR
TGAAAAGCAGCAGTTGCTTT+TGG 0.272353 4_1:-76395559 Msa0573280:CDS
GGTGGAATCAATCGAATTAA+AGG 0.294183 4_1:+76392724 None:intergenic
AGATATATGGGTACAGTTAT+TGG 0.295795 4_1:-76394890 Msa0573280:CDS
TTGTCAAATGATTTCTCTTC+GGG 0.297658 4_1:-76392839 Msa0573280:CDS
CGTGTATTTACCAGGCATTC+CGG 0.299568 4_1:+76394539 None:intergenic
TCAAAGTTCTAATGCAAATA+TGG 0.301456 4_1:-76393227 Msa0573280:CDS
GAAGGAAGATTGGAATAGTT+TGG 0.307635 4_1:+76396584 None:intergenic
TCTTCCTGCGCGGTGGTCAT+TGG 0.312151 4_1:+76397159 None:intergenic
CAGATCCTTATGAGCACAAT+AGG 0.312309 4_1:-76393286 Msa0573280:CDS
CTGCTTCCGGTTGCAGTATA+CGG 0.316839 4_1:-76393420 Msa0573280:CDS
TAAACATACCACGGTATATA+TGG 0.317191 4_1:+76395968 None:intergenic
TGAATATCTTGTTATGTCTA+TGG 0.317798 4_1:+76392461 None:intergenic
GCCCAGTCTTGTTGTGCCTT+TGG 0.320530 4_1:+76392868 None:intergenic
AGAAAAGACGGCGGCGAAAT+TGG 0.323897 4_1:+76397238 None:intergenic
GTTCAACAGATGAGCTTAGA+TGG 0.339166 4_1:-76392122 Msa0573280:CDS
AATTTCACCATCATTTGTTC+TGG 0.340101 4_1:+76391875 None:intergenic
AGAAATATCTGATCTTAATA+TGG 0.340243 4_1:+76396264 None:intergenic
TTCTGTCTAGAATGTTGTTC+TGG 0.341108 4_1:+76394069 None:intergenic
TCCCAATTGATGGGCAATAT+CGG 0.347775 4_1:+76394197 None:intergenic
GGCGAAGTAGGGTCTCAATC+TGG 0.354609 4_1:-76394635 Msa0573280:CDS
GTTACATATGTCTGATAATC+AGG 0.354643 4_1:-76393818 Msa0573280:CDS
CTCGCAGTGGCGAAATTTGC+AGG 0.362593 4_1:-76394834 Msa0573280:intron
TGGTAACATAGTTTATTCTT+AGG 0.363884 4_1:-76391999 Msa0573280:three_prime_UTR
AGGATTTGCATGGAAATGTT+TGG 0.365077 4_1:-76395999 Msa0573280:CDS
TGATGGCGGGATTGCTTAAA+CGG 0.367237 4_1:-76392054 Msa0573280:exon
AGCTCATGCCAGGGAAAGCC+TGG 0.368180 4_1:+76394325 None:intergenic
CGAAGATTTGATTCATTAGC+AGG 0.374536 4_1:+76391820 None:intergenic
TAGTATGCACATTGGAATTC+TGG 0.374814 4_1:-76395478 Msa0573280:CDS
CCGGGTTGTCTTGGTCTCTT+GGG 0.376968 4_1:+76394558 None:intergenic
GCTAATCAGTTATCTGCTTC+CGG 0.381077 4_1:-76393433 Msa0573280:CDS
GGTTGGGATGAAGCCACCGC+TGG 0.381936 4_1:-76394663 Msa0573280:CDS
AGTTATTGGTGTTAGTGATC+TGG 0.384884 4_1:-76394876 Msa0573280:CDS
ATCCGATATTGCCCATCAAT+TGG 0.384904 4_1:-76394199 Msa0573280:CDS
CATTCAAAACTTGGAAGTTC+AGG 0.387423 4_1:-76392972 Msa0573280:CDS
GCATATACTTCGTCTGTGTC+TGG 0.387732 4_1:+76396434 None:intergenic
CTATTGTGCTCATAAGGATC+TGG 0.395388 4_1:+76393287 None:intergenic
CCAGGCATTCCGGGTTGTCT+TGG 0.396250 4_1:+76394549 None:intergenic
CTTGTCAATCTTCCTTTACC+TGG 0.396770 4_1:-76396842 Msa0573280:intron
ATTGAAGAATATTGTTCGTT+TGG 0.398297 4_1:+76393983 None:intergenic
TGCTATCCAGACAGATTGTT+TGG 0.404214 4_1:-76393104 Msa0573280:CDS
GGGAGAACTGAACATTGTTC+TGG 0.406967 4_1:+76393557 None:intergenic
GAGTGATTCACGCTTTCATC+AGG 0.408801 4_1:-76393044 Msa0573280:CDS
TACCCTCAGACTTGCTTGAA+TGG 0.410887 4_1:-76393130 Msa0573280:CDS
GGCATGGAAGGCACATGATT+TGG 0.411693 4_1:+76394249 None:intergenic
CATGATCTGGCTCGTAGGTT+TGG 0.411763 4_1:-76392420 Msa0573280:CDS
AACCAAAGGCACAACAAGAC+TGG 0.412678 4_1:-76392870 Msa0573280:CDS
AGGTATTTATGATGCATTTG+TGG 0.412953 4_1:-76391948 Msa0573280:three_prime_UTR
TTTGTCAAATGATTTCTCTT+CGG 0.413068 4_1:-76392840 Msa0573280:CDS
GATTCCACCATAAATGATAG+TGG 0.413135 4_1:-76392710 Msa0573280:CDS
TTCCATTGGCCAAGTACTAC+AGG 0.413274 4_1:-76395283 Msa0573280:CDS
TACGGCGGCGATGGCGGCGG+AGG 0.414117 4_1:+76397131 None:intergenic
CATCTAATTCTTGCCTCTGC+TGG 0.417457 4_1:+76393695 None:intergenic
TGCTAGTGGGAGATGACCCT+TGG 0.417871 4_1:-76392323 Msa0573280:CDS
AGATCCTTATGAGCACAATA+GGG 0.418938 4_1:-76393285 Msa0573280:CDS
CCATCCACTTCTAGTGGATT+GGG 0.419310 4_1:-76394105 Msa0573280:CDS
CGCGCCAACACAGTTATTTG+TGG 0.420327 4_1:+76393330 None:intergenic
ATTCTTGCCTCTGCTGGTCA+TGG 0.420432 4_1:+76393701 None:intergenic
AGCAGGTTATATTACCTTCA+TGG 0.422936 4_1:+76391837 None:intergenic
GGTATTTATGATGCATTTGT+GGG 0.423009 4_1:-76391947 Msa0573280:three_prime_UTR
CGATGAGCTTAAACATGATC+TGG 0.423167 4_1:-76392433 Msa0573280:CDS
AAGGCATTGTATTCTTGAAA+AGG 0.425491 4_1:+76394379 None:intergenic
ATTAATATGATCTGGCATAG+TGG 0.426158 4_1:+76393846 None:intergenic
AATCTTCTCTGCAGCACGGC+GGG 0.426716 4_1:+76396156 None:intergenic
GTGTATTTACCAGGCATTCC+GGG 0.427956 4_1:+76394540 None:intergenic
AATTGATGTGGCGGCGGCGG+CGG 0.428196 4_1:+76392662 None:intergenic
TCTGTTGTACAAAATCTTCC+TGG 0.429011 4_1:-76394222 Msa0573280:CDS
ACCATCCACTTCTAGTGGAT+TGG 0.429363 4_1:-76394106 Msa0573280:CDS
CAATACTCTGGGGATTAAGT+TGG 0.432254 4_1:+76394007 None:intergenic
GAAGCATTATTTAGAGCAAG+TGG 0.433056 4_1:+76391569 None:intergenic
GATTGGAATAGTTTGGTACT+TGG 0.434364 4_1:+76396591 None:intergenic
CTCAGAATTTGTTATTCCAT+TGG 0.434832 4_1:-76395297 Msa0573280:CDS
TGTTCGTTTGGACAATACTC+TGG 0.436345 4_1:+76393995 None:intergenic
CGCTAACTATTCTTCAGTGT+TGG 0.439272 4_1:-76392019 Msa0573280:three_prime_UTR
CCGCTGGGGAAAGGCGAAGT+AGG 0.441513 4_1:-76394647 Msa0573280:CDS
TCCGATATTGCCCATCAATT+GGG 0.442827 4_1:-76394198 Msa0573280:CDS
GGCGGCGGCGGCGGAGCCCA+TGG 0.446244 4_1:+76392671 None:intergenic
CATCCCCTATTGTGCTCATA+AGG 0.447239 4_1:+76393281 None:intergenic
AGTATACGGACTGTAGCAAC+TGG 0.450431 4_1:-76393406 Msa0573280:CDS
ACTGAGGAAGATAAATTAGT+TGG 0.450794 4_1:+76395513 None:intergenic
TACAGTCCGTATACTGCAAC+CGG 0.450974 4_1:+76393414 None:intergenic
AGGATCTGGGATGTGGTCAC+TGG 0.452693 4_1:+76393301 None:intergenic
AGGCAACTTGGAAGGAAGAT+TGG 0.453302 4_1:+76396574 None:intergenic
ATTAGAACTTTGACTCAAGA+TGG 0.454012 4_1:+76393237 None:intergenic
ATAGACATAACAAGATATTC+AGG 0.454220 4_1:-76392459 Msa0573280:CDS
GGTTCTGAGAGAGACTTCTA+TGG 0.455947 4_1:+76393929 None:intergenic
GGATTGCTTAAACGGGGTCT+AGG 0.456319 4_1:-76392046 Msa0573280:exon
CTTCCATGGTTTCACAAACA+TGG 0.456624 4_1:-76392763 Msa0573280:CDS
AGGAATTTCAAACACTTGAC+GGG 0.458374 4_1:+76393645 None:intergenic
TAGAGACAACATTCAAAACT+TGG 0.459122 4_1:-76392981 Msa0573280:CDS
AGCTACGGCGGCGATGGCGG+CGG 0.460031 4_1:+76397128 None:intergenic
GTATATTGCCCTGTAGTACT+TGG 0.461118 4_1:+76395274 None:intergenic
GGTCTCTTGGGTCTGAAGAA+TGG 0.465469 4_1:+76394570 None:intergenic
CTGCTAATGAATCAAATCTT+CGG 0.466022 4_1:-76391819 Msa0573280:three_prime_UTR
CTCTTCGGGAGGCTTGCTTG+GGG 0.468810 4_1:-76392825 Msa0573280:CDS
GTTTCTTGGATAGTGGTCCA+TGG 0.471437 4_1:-76392688 Msa0573280:CDS
CTGGCATGAGCTTAGCTCAA+TGG 0.473543 4_1:-76394314 Msa0573280:CDS
CAATGGTGGCCTTCCAAGAC+AGG 0.473783 4_1:-76392090 Msa0573280:CDS
GTTGTAAGCAAGTGGCGTTT+CGG 0.475274 4_1:+76395815 None:intergenic
TGCGGGAGCTACGGCGGCGA+TGG 0.475877 4_1:+76397122 None:intergenic
TAGATGTCACACACAACTCT+AGG 0.477370 4_1:-76393678 Msa0573280:CDS
AAACGCCACTTGCTTACAAC+CGG 0.479247 4_1:-76395812 Msa0573280:CDS
TGAAATTGATGTGGCGGCGG+CGG 0.479389 4_1:+76392659 None:intergenic
GATGGCGGGATTGCTTAAAC+GGG 0.479556 4_1:-76392053 Msa0573280:exon
ACGTATCCAAACAATCTGTC+TGG 0.482598 4_1:+76393098 None:intergenic
GCTGGTGATTGATGATTAGA+TGG 0.482775 4_1:+76397214 None:intergenic
ACGGCGGCGATGGCGGCGGA+GGG 0.485408 4_1:+76397132 None:intergenic
GATAGTGGTTTCTTGGATAG+TGG 0.485936 4_1:-76392695 Msa0573280:CDS
TGTCTCTAGAAAACATTGAC+TGG 0.487416 4_1:+76392996 None:intergenic
GCATATGGCAATAGCATGAA+TGG 0.488238 4_1:-76392929 Msa0573280:CDS
GTTCGTTTGGACAATACTCT+GGG 0.488396 4_1:+76393996 None:intergenic
GAGCTGCTACTGGCCTGTCT+TGG 0.488820 4_1:+76392077 None:intergenic
GCCAGAACTTTCATCTTCCA+TGG 0.489353 4_1:-76392777 Msa0573280:CDS
GGCTCGTAGGTTTGGTATCG+AGG 0.489770 4_1:-76392412 Msa0573280:CDS
CCAAGACAACCCGGAATGCC+TGG 0.489934 4_1:-76394549 Msa0573280:intron
GAGGAATTTCAAACACTTGA+CGG 0.490640 4_1:+76393644 None:intergenic
AAGAATACAATGCCTTGGCT+TGG 0.490942 4_1:-76394372 Msa0573280:CDS
ATCATTCTAAAGCGCATGCC+AGG 0.491206 4_1:+76395236 None:intergenic
ACCAACCGCAAAATATGATT+AGG 0.491435 4_1:-76393870 Msa0573280:CDS
CCCGCCATCAGAGCTGCTAC+TGG 0.494278 4_1:+76392067 None:intergenic
TTTCTTGGATAGTGGTCCAT+GGG 0.495092 4_1:-76392687 Msa0573280:CDS
ATTCATCTGTCTGCGTCAGC+TGG 0.497706 4_1:+76397196 None:intergenic
TGCTCAAGAACTTGTGGCAA+AGG 0.499028 4_1:-76396019 Msa0573280:CDS
GCTAGTGGGAGATGACCCTT+GGG 0.500146 4_1:-76392322 Msa0573280:CDS
ATGAAGCCACCGCTGGGGAA+AGG 0.500429 4_1:-76394656 Msa0573280:CDS
TTCCATGGTTTCACAAACAT+GGG 0.502002 4_1:-76392762 Msa0573280:CDS
CATTGAGCTAAGCTCATGCC+AGG 0.503153 4_1:+76394315 None:intergenic
AGAAATTCTTGTCTCTTGAA+AGG 0.503169 4_1:-76391668 Msa0573280:three_prime_UTR
TACTATGATCTGTCATCTGA+TGG 0.503223 4_1:+76393581 None:intergenic
AGTTGGAACAAAATTTCTGT+TGG 0.503590 4_1:-76391736 Msa0573280:three_prime_UTR
GACTGGGGATAGTAAGATAA+CGG 0.506028 4_1:+76393013 None:intergenic
AATGTAGCCTTCACTGCACC+GGG 0.507270 4_1:-76394144 Msa0573280:CDS
GAGCTATGGCAAGCTTGTGC+TGG 0.509380 4_1:-76396869 Msa0573280:CDS
ACACTGGCTGAAGTGTCATC+CGG 0.509924 4_1:+76396411 None:intergenic
TTTGCCACAAGTTCTTGAGC+AGG 0.510930 4_1:+76396021 None:intergenic
CTCATCTGTTGAACTTCTTG+AGG 0.510944 4_1:+76392131 None:intergenic
TGCTACTGGCCTGTCTTGGA+AGG 0.511125 4_1:+76392081 None:intergenic
GCATGCCAGGTGATATTTGA+TGG 0.511916 4_1:+76395249 None:intergenic
AATACTCTGGGGATTAAGTT+GGG 0.512674 4_1:+76394008 None:intergenic
GTGAAGAGTACAAGGCAACT+TGG 0.513391 4_1:+76396562 None:intergenic
TCTAAAATGTCTAGTCATGT+TGG 0.513419 4_1:-76393475 Msa0573280:CDS
ATGACCACCGCGCAGGAAGA+AGG 0.513419 4_1:-76397156 Msa0573280:CDS
TGCAATGAGCTAGCCATAGC+AGG 0.513425 4_1:+76394273 None:intergenic
TGGAAGATGAAAGTTCTGGC+TGG 0.513447 4_1:+76392780 None:intergenic
GGTATATAAACGCGGAGCTG+TGG 0.513560 4_1:-76392490 Msa0573280:CDS
AGGCATCCCCGGTGCAGTGA+AGG 0.513824 4_1:+76394137 None:intergenic
TGCTCCCAATCCACTAGAAG+TGG 0.515219 4_1:+76394101 None:intergenic
ATATGTCTGATAATCAGGTT+CGG 0.516344 4_1:-76393813 Msa0573280:CDS
CAGGCCAGTAGCAGCTCTGA+TGG 0.518581 4_1:-76392071 Msa0573280:CDS
GAGTGGAAAATCCCAATTGA+TGG 0.518874 4_1:+76394187 None:intergenic
ACTGATAAATAGACTCCATC+CGG 0.519888 4_1:+76395793 None:intergenic
ATTCTTGTCTCTTGAAAGGT+GGG 0.520350 4_1:-76391664 Msa0573280:three_prime_UTR
ACAACATTCTAGACAGAACT+TGG 0.520367 4_1:-76394064 Msa0573280:CDS
GTGGTGACCTGCGGGAGCTA+CGG 0.520396 4_1:+76397113 None:intergenic
GCCACTGAATCTAGATTCTA+CGG 0.520528 4_1:-76392894 Msa0573280:CDS
ATCGCCGCCGTAGCTCCCGC+AGG 0.521114 4_1:-76397120 Msa0573280:intron
CCAGTAGCAGCTCTGATGGC+GGG 0.522259 4_1:-76392067 Msa0573280:CDS
CCTTCCACAAATAACTGTGT+TGG 0.522427 4_1:-76393334 Msa0573280:CDS
AAGGATCCCCAGGCTTTCCC+TGG 0.522760 4_1:-76394333 Msa0573280:CDS
GGTAGCATCTGAGGCATCCC+CGG 0.523161 4_1:+76394126 None:intergenic
GTCTATTTATCAGTGGAAAG+AGG 0.523603 4_1:-76395784 Msa0573280:CDS
GCGAAGTAGGGTCTCAATCT+GGG 0.524652 4_1:-76394634 Msa0573280:CDS
GAGACAAGAATTTCTCTCAA+AGG 0.525102 4_1:+76391676 None:intergenic
AGTTTCAACAGACTATAATT+GGG 0.527138 4_1:-76393897 Msa0573280:CDS
AAATTTGCCAGTGTAGAAGC+AGG 0.528558 4_1:+76391904 None:intergenic
CAATGTAGCCTTCACTGCAC+CGG 0.529970 4_1:-76394145 Msa0573280:CDS
GGGAGCTACGGCGGCGATGG+CGG 0.530999 4_1:+76397125 None:intergenic
AAGACGGCGGCGAAATTGGC+CGG 0.531971 4_1:+76397242 None:intergenic
TTAATATGATCTGGCATAGT+GGG 0.533492 4_1:+76393847 None:intergenic
ACTTCGCCTTTCCCCAGCGG+TGG 0.533968 4_1:+76394650 None:intergenic
ACCATGGAAGATGAAAGTTC+TGG 0.534141 4_1:+76392776 None:intergenic
CATATGGCAATAGCATGAAT+GGG 0.536374 4_1:-76392928 Msa0573280:CDS
TGATGGGCAATATCGGATCC+AGG 0.538834 4_1:+76394204 None:intergenic
AATAACAAATTCTGAGGGAC+TGG 0.542245 4_1:+76395304 None:intergenic
GCCACAAGTTCTTGAGCAGG+AGG 0.542592 4_1:+76396024 None:intergenic
GCTAGGTGCAATGTTGCATA+TGG 0.543118 4_1:-76392944 Msa0573280:CDS
GCCGGAAAATAGTGAAAGTA+CGG 0.544236 4_1:+76397260 None:intergenic
GTATATAAACGCGGAGCTGT+GGG 0.544584 4_1:-76392489 Msa0573280:CDS
TGAAGAGCCAGAACAAATGA+TGG 0.544719 4_1:-76391882 Msa0573280:three_prime_UTR
ATATGATGTTGTTGTAAAGT+TGG 0.545230 4_1:-76391753 Msa0573280:three_prime_UTR
TCTTCGGGAGGCTTGCTTGG+GGG 0.545254 4_1:-76392824 Msa0573280:CDS
CGCTGGGGAAAGGCGAAGTA+GGG 0.546178 4_1:-76394646 Msa0573280:CDS
TGAAAATGATGTTCTGCTAG+TGG 0.546885 4_1:-76392337 Msa0573280:CDS
ACCTCCTGCTCAAGAACTTG+TGG 0.546993 4_1:-76396025 Msa0573280:CDS
AACTGTTGATTAATATGATC+TGG 0.547585 4_1:+76393838 None:intergenic
TATGTGTATGAAGGATCCCC+AGG 0.547865 4_1:-76394343 Msa0573280:CDS
TATTGTGCTCATAAGGATCT+GGG 0.547958 4_1:+76393288 None:intergenic
ACGACATGGGTACCAGGTAA+AGG 0.548673 4_1:+76396830 None:intergenic
CACTGGCTGAAGTGTCATCC+GGG 0.549878 4_1:+76396412 None:intergenic
CGCCGCCACATCAATTTCAA+CGG 0.550375 4_1:-76392655 Msa0573280:CDS
AGGATTATAAAACACGGTGA+AGG 0.551271 4_1:+76395422 None:intergenic
AGGATCGACAACGAGTAGGT+TGG 0.551361 4_1:-76392380 Msa0573280:CDS
GTCTCTAGAAAACATTGACT+GGG 0.554010 4_1:+76392997 None:intergenic
TTGGGTCTGAAGAATGGAGG+TGG 0.554224 4_1:+76394576 None:intergenic
GCTCATGCCAGGGAAAGCCT+GGG 0.555123 4_1:+76394326 None:intergenic
CATACAGCAAAATCCTGCTA+TGG 0.555985 4_1:-76394286 Msa0573280:CDS
GCTAGTGATACGAGTACTCA+TGG 0.556488 4_1:-76396193 Msa0573280:CDS
AGCGTGAATCACTCTGAGAA+AGG 0.556586 4_1:+76393053 None:intergenic
AATTCTTGTCTCTTGAAAGG+TGG 0.557273 4_1:-76391665 Msa0573280:three_prime_UTR
GTTGGGATGAAGCCACCGCT+GGG 0.559621 4_1:-76394662 Msa0573280:CDS
GTGATCTGGATTCCGTGAGA+TGG 0.560268 4_1:-76394862 Msa0573280:CDS
GCCAGTAGCAGCTCTGATGG+CGG 0.562387 4_1:-76392068 Msa0573280:CDS
ACCAAAGGCACAACAAGACT+GGG 0.563393 4_1:-76392869 Msa0573280:CDS
ATGGTCACAATGTAGCTGTC+TGG 0.564229 4_1:+76391611 None:intergenic
TTACAAAAGGACCAACCAAA+AGG 0.564360 4_1:+76391640 None:intergenic
GTGAGACTGTGAAGAGTACA+AGG 0.565326 4_1:+76396554 None:intergenic
CTCTTGGGTCTGAAGAATGG+AGG 0.566546 4_1:+76394573 None:intergenic
TTACAACAACATCATATGCA+TGG 0.567201 4_1:+76391759 None:intergenic
CAATGGAATAACAAATTCTG+AGG 0.568619 4_1:+76395298 None:intergenic
ATTTAGAGCAAGTGGAAGAG+TGG 0.568819 4_1:+76391577 None:intergenic
GTCTGTTGAAACTGTTGCAG+TGG 0.569313 4_1:+76393907 None:intergenic
TGTCTGGTGATGTTTACAAA+AGG 0.569543 4_1:+76391627 None:intergenic
GGAAGATGAAAGTTCTGGCT+GGG 0.570214 4_1:+76392781 None:intergenic
CCAACACAGTTATTTGTGGA+AGG 0.571284 4_1:+76393334 None:intergenic
CCCAAGAGACCAAGACAACC+CGG 0.575541 4_1:-76394558 Msa0573280:CDS
GCTGTCAAGAACTTCCATGA+AGG 0.575623 4_1:-76391851 Msa0573280:three_prime_UTR
AGTGGAAAATCCCAATTGAT+GGG 0.576510 4_1:+76394188 None:intergenic
ACAACAGATGCAGGCATGGA+AGG 0.576655 4_1:+76394237 None:intergenic
CAACAACAGCAAACACAACC+CGG 0.577673 4_1:-76393505 Msa0573280:CDS
GCACCATTCAAGCAAGTCTG+AGG 0.578071 4_1:+76393127 None:intergenic
GGATTATAAAACACGGTGAA+GGG 0.578882 4_1:+76395423 None:intergenic
TCAAATGATTTCTCTTCGGG+AGG 0.579135 4_1:-76392836 Msa0573280:CDS
TAACATAGTTTATTCTTAGG+CGG 0.581140 4_1:-76391996 Msa0573280:three_prime_UTR
CGTTGAAATTGATGTGGCGG+CGG 0.581323 4_1:+76392656 None:intergenic
ATGCTACCATCCACTTCTAG+TGG 0.582192 4_1:-76394111 Msa0573280:CDS
TGGAAGTTCAGGCTGATGCT+AGG 0.582616 4_1:-76392961 Msa0573280:CDS
TTGTACAACAGATGCAGGCA+TGG 0.582828 4_1:+76394233 None:intergenic
GCTCATAAGGATCTGGGATG+TGG 0.584335 4_1:+76393294 None:intergenic
AGCAACTGGGACAGTGCCAT+CGG 0.588750 4_1:-76393392 Msa0573280:CDS
TTCAAAACCATGACCAGCAG+AGG 0.590529 4_1:-76393708 Msa0573280:CDS
ATCTGGGATGTGGTCACTGG+AGG 0.591723 4_1:+76393304 None:intergenic
ATCTTCTCTGCAGCACGGCG+GGG 0.594206 4_1:+76396157 None:intergenic
GTTATTTGTGGAAGGCGAAG+TGG 0.595059 4_1:+76393342 None:intergenic
AGGCAGAGTACTTACTCCCA+AGG 0.595745 4_1:+76392306 None:intergenic
TCGAATTAAAGGTCATATCA+GGG 0.595965 4_1:+76392735 None:intergenic
GAAGGCGAAGTGGAACAAGA+TGG 0.596572 4_1:+76393352 None:intergenic
AGATGTCACACACAACTCTA+GGG 0.596707 4_1:-76393677 Msa0573280:CDS
TGATTAGCAGTAGTTGCAGA+AGG 0.597385 4_1:+76393448 None:intergenic
TCCCCATGTTTGTGAAACCA+TGG 0.599148 4_1:+76392760 None:intergenic
GAAGTGGATGGTAGCATCTG+AGG 0.599474 4_1:+76394117 None:intergenic
GCCACTTGCTTACAACCGGA+TGG 0.600220 4_1:-76395808 Msa0573280:CDS
TCCATCCGGTTGTAAGCAAG+TGG 0.600492 4_1:+76395807 None:intergenic
TATTTATGATGCATTTGTGG+GGG 0.601287 4_1:-76391945 Msa0573280:three_prime_UTR
GCTCGTAGGTTTGGTATCGA+GGG 0.603070 4_1:-76392411 Msa0573280:CDS
GAAACCACTATCATTTATGG+TGG 0.604205 4_1:+76392706 None:intergenic
GTATTTATGATGCATTTGTG+GGG 0.604855 4_1:-76391946 Msa0573280:three_prime_UTR
ATCCGTTGAAATTGATGTGG+CGG 0.605741 4_1:+76392653 None:intergenic
TGGTGATGATATGTGTATGA+AGG 0.605987 4_1:-76394352 Msa0573280:CDS
AGGCACAACAAGACTGGGCA+AGG 0.606069 4_1:-76392864 Msa0573280:CDS
TTCTTGTCTCTTGAAAGGTG+GGG 0.606515 4_1:-76391663 Msa0573280:three_prime_UTR
CTAATGAATCAAATCTTCGG+TGG 0.607955 4_1:-76391816 Msa0573280:three_prime_UTR
GCCCTGTAGTACTTGGCCAA+TGG 0.609643 4_1:+76395281 None:intergenic
TGATTAGATGGAAGAAAAGA+CGG 0.609708 4_1:+76397226 None:intergenic
ACACAGACGAAGTATATGCC+CGG 0.610600 4_1:-76396430 Msa0573280:CDS
TGATTGAGAGATTTGTTGAG+TGG 0.612624 4_1:+76394170 None:intergenic
TGGTATCGAGGGACAACTAG+AGG 0.612628 4_1:-76392400 Msa0573280:CDS
ACCGTAGAATCTAGATTCAG+TGG 0.613002 4_1:+76392893 None:intergenic
CCCAATCCACTAGAAGTGGA+TGG 0.616543 4_1:+76394105 None:intergenic
GTGGCGTTAACAGTGAGCTA+TGG 0.617036 4_1:-76396883 Msa0573280:CDS
GCATTATCAGTATTTACCGA+TGG 0.617541 4_1:+76393376 None:intergenic
AGAGTACAAGGCAACTTGGA+AGG 0.617752 4_1:+76396566 None:intergenic
TACAGCCATCAAATATCACC+TGG 0.618296 4_1:-76395254 Msa0573280:CDS
GGCAGAGTACTTACTCCCAA+GGG 0.618717 4_1:+76392307 None:intergenic
CTTGTGGCAAAGGATTTGCA+TGG 0.621792 4_1:-76396009 Msa0573280:CDS
GATCCTTATGAGCACAATAG+GGG 0.621820 4_1:-76393284 Msa0573280:CDS
TTTACATGTGTAGTTTGACA+TGG 0.625045 4_1:-76396290 Msa0573280:intron
GGAAAATCTTCTCTGCAGCA+CGG 0.628956 4_1:+76396152 None:intergenic
TTAAACATGATCTGGCTCGT+AGG 0.630324 4_1:-76392425 Msa0573280:CDS
CAGAAGACTCAGGAACAAGA+AGG 0.630456 4_1:-76395205 Msa0573280:intron
TCCATTGGCCAAGTACTACA+GGG 0.631838 4_1:-76395282 Msa0573280:CDS
TCTGTTGAAACTGTTGCAGT+GGG 0.633923 4_1:+76393908 None:intergenic
GTGACCTGCGGGAGCTACGG+CGG 0.634351 4_1:+76397116 None:intergenic
GCTTCAAAACTCACTGCTCG+AGG 0.635210 4_1:-76393617 Msa0573280:CDS
CACATATCATCACCAAGCCA+AGG 0.636223 4_1:+76394360 None:intergenic
CTAGATTCTACGGTAACCAA+AGG 0.638712 4_1:-76392884 Msa0573280:CDS
CCTACTTCGCCTTTCCCCAG+CGG 0.639133 4_1:+76394647 None:intergenic
GGGACCTTCTTCCTGCGCGG+TGG 0.640369 4_1:+76397152 None:intergenic
CACCATTCAAGCAAGTCTGA+GGG 0.641245 4_1:+76393128 None:intergenic
TCAAGTGATAGTATGCACAT+TGG 0.641498 4_1:-76395486 Msa0573280:CDS
CTAATCCGTTGAAATTGATG+TGG 0.648950 4_1:+76392650 None:intergenic
CAAACCAATGACCACCGCGC+AGG 0.651206 4_1:-76397163 Msa0573280:exon
GAAAATGATGTTCTGCTAGT+GGG 0.652643 4_1:-76392336 Msa0573280:CDS
ATGTTTGAAACAGAAGACTC+AGG 0.652948 4_1:-76395215 Msa0573280:CDS
CTAGAGGATCGACAACGAGT+AGG 0.653303 4_1:-76392384 Msa0573280:CDS
TCCATGGTTTCACAAACATG+GGG 0.657477 4_1:-76392761 Msa0573280:CDS
GGATGGAGTCTATTTATCAG+TGG 0.659428 4_1:-76395791 Msa0573280:CDS
GGAATTTCAAACACTTGACG+GGG 0.660538 4_1:+76393646 None:intergenic
ATAAACGCGGAGCTGTGGGA+AGG 0.662648 4_1:-76392485 Msa0573280:CDS
GCAGGAGAAGACAAGAATGA+CGG 0.663150 4_1:-76396905 Msa0573280:intron
AATGGAATAACAAATTCTGA+GGG 0.663493 4_1:+76395299 None:intergenic
AAAATTAGCATACAAGTGGG+GGG 0.666743 4_1:+76396131 None:intergenic
GTATACGGACTGTAGCAACT+GGG 0.670910 4_1:-76393405 Msa0573280:CDS
AAATCTTCTCTGCAGCACGG+CGG 0.672265 4_1:+76396155 None:intergenic
CTCATGCCAGGGAAAGCCTG+GGG 0.677647 4_1:+76394327 None:intergenic
ACATACCACGGTATATATGG+CGG 0.680656 4_1:+76395971 None:intergenic
ATTGAGCTAAGCTCATGCCA+GGG 0.680824 4_1:+76394316 None:intergenic
GAGCACAATAGGGGATGACG+TGG 0.681106 4_1:-76393275 Msa0573280:CDS
ACGGATTAGAACATATACCA+AGG 0.682871 4_1:-76392636 Msa0573280:intron
TTGGGATGAAGCCACCGCTG+GGG 0.690930 4_1:-76394661 Msa0573280:CDS
GGTAAAGGAAGATTGACAAG+AGG 0.691827 4_1:+76396845 None:intergenic
TTCGTTTGGACAATACTCTG+GGG 0.701245 4_1:+76393997 None:intergenic
TGGGTCTGAACTTGACTCTG+CGG 0.702604 4_1:+76394027 None:intergenic
AGTGAAAGTACGGTGAACGA+CGG 0.711798 4_1:+76397270 None:intergenic
TCTCTAGAAAACATTGACTG+GGG 0.713171 4_1:+76392998 None:intergenic
ATGGCGGGATTGCTTAAACG+GGG 0.715037 4_1:-76392052 Msa0573280:exon
GGAGAAGACAAGAATGACGG+TGG 0.716008 4_1:-76396902 Msa0573280:CDS
ACTATCACTTGAGAGTACTG+AGG 0.721929 4_1:+76395497 None:intergenic
AAGTTCCGCCATATATACCG+TGG 0.728305 4_1:-76395976 Msa0573280:intron
ATGGTGCTTACGGAAGACAC+TGG 0.743265 4_1:+76396395 None:intergenic
TGACCTAGGATTATAAAACA+CGG 0.743301 4_1:+76395416 None:intergenic
GGAGGGACCTTCTTCCTGCG+CGG 0.744332 4_1:+76397149 None:intergenic
TTAGATGGAAGAAAAGACGG+CGG 0.763207 4_1:+76397229 None:intergenic
AGTGATACGAGTACTCATGG+AGG 0.790592 4_1:-76396190 Msa0573280:CDS
ATGTAGCCTTCACTGCACCG+GGG 0.797432 4_1:-76394143 Msa0573280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAGAAACAATAAAAAA+TGG + chr4_1:76391915-76391934 None:intergenic 10.0%
!! AAACTATTATGATTATAATA+CGG + chr4_1:76392257-76392276 None:intergenic 10.0%
!! AAGTATAATAACATATGAAA+TGG + chr4_1:76392552-76392571 None:intergenic 15.0%
!! CTGAAAATTTATATTTAACT+TGG - chr4_1:76393974-76393993 Msa0573280:CDS 15.0%
!!! TTAATTTTATTGCAGATATA+TGG - chr4_1:76394022-76394041 Msa0573280:CDS 15.0%
!!! TAATTTTATTGCAGATATAT+GGG - chr4_1:76394023-76394042 Msa0573280:CDS 15.0%
!!! AAAATAGGGTTTTTAAAATT+AGG + chr4_1:76396686-76396705 None:intergenic 15.0%
!!! CCTAGAAAATTTTAAAGTTT+CGG - chr4_1:76392594-76392613 Msa0573280:intron 20.0%
!!! CTAGAAAATTTTAAAGTTTC+GGG - chr4_1:76392595-76392614 Msa0573280:intron 20.0%
!! AGAAATATCTGATCTTAATA+TGG + chr4_1:76392664-76392683 None:intergenic 20.0%
!! AAAAAAATTAGCATACAAGT+GGG + chr4_1:76392800-76392819 None:intergenic 20.0%
!! AAAAAAAATTAGCATACAAG+TGG + chr4_1:76392801-76392820 None:intergenic 20.0%
!!! TAAGCAAAAGACTTTAAAAA+GGG + chr4_1:76393065-76393084 None:intergenic 20.0%
!!! ATAAGCAAAAGACTTTAAAA+AGG + chr4_1:76393066-76393085 None:intergenic 20.0%
!! TAATATTAGCAGAATAAAGT+CGG + chr4_1:76393551-76393570 None:intergenic 20.0%
!! TATGATAGTATTATTGTGAT+AGG - chr4_1:76393941-76393960 Msa0573280:CDS 20.0%
!!! GATATCTTATTTGTTTCTTA+TGG - chr4_1:76396722-76396741 Msa0573280:intron 20.0%
!!! ATTATCATTGTTGTTCAAAA+AGG - chr4_1:76396957-76396976 Msa0573280:intron 20.0%
!! ATTGTTGTGTTTGAAATAAG+AGG + chr4_1:76392158-76392177 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAACA+TGG - chr4_1:76392231-76392250 Msa0573280:intron 25.0%
!!! CCGAAACTTTAAAATTTTCT+AGG + chr4_1:76392597-76392616 None:intergenic 25.0%
! AAAAAATTAGCATACAAGTG+GGG + chr4_1:76392799-76392818 None:intergenic 25.0%
!!! TCAGGTTACTATTTCTATAT+AGG - chr4_1:76392864-76392883 Msa0573280:CDS 25.0%
!!! GAGACTCTGTTTTATTTATA+CGG - chr4_1:76393174-76393193 Msa0573280:CDS 25.0%
! ACAAACATCAACAGAATAAA+AGG + chr4_1:76393217-76393236 None:intergenic 25.0%
!! TTTTATTCTGTTGATGTTTG+TGG - chr4_1:76393216-76393235 Msa0573280:CDS 25.0%
!! GCAATCAATGTTTATCATTT+TGG - chr4_1:76393273-76393292 Msa0573280:CDS 25.0%
! GTAAAGAAAGGAAAAAAAGT+CGG + chr4_1:76393593-76393612 None:intergenic 25.0%
! AATGGAATAACAAATTCTGA+GGG + chr4_1:76393629-76393648 None:intergenic 25.0%
! AAAACTACTCATATGATACA+TGG + chr4_1:76393761-76393780 None:intergenic 25.0%
! TAAAGGATTATTATCAGACT+TGG + chr4_1:76393794-76393813 None:intergenic 25.0%
! AACTTGGAAATTCTTTGATT+AGG - chr4_1:76393990-76394009 Msa0573280:CDS 25.0%
! AAAGTATAAGTGATGATTCA+AGG + chr4_1:76394180-76394199 None:intergenic 25.0%
!! AACATACTTTTGCAACTAAA+AGG + chr4_1:76394412-76394431 None:intergenic 25.0%
! ATTGAAGAATATTGTTCGTT+TGG + chr4_1:76394945-76394964 None:intergenic 25.0%
! AGTTTCAACAGACTATAATT+GGG - chr4_1:76395028-76395047 Msa0573280:intron 25.0%
!! AACTGTTGATTAATATGATC+TGG + chr4_1:76395090-76395109 None:intergenic 25.0%
!! TCAAAGTTCTAATGCAAATA+TGG - chr4_1:76395698-76395717 Msa0573280:intron 25.0%
!! TTTTCGGAAATGTTTAAACA+AGG + chr4_1:76395756-76395775 None:intergenic 25.0%
! TTTGTCAAATGATTTCTCTT+CGG - chr4_1:76396085-76396104 Msa0573280:intron 25.0%
! AGAGTAATAATACTAAACCT+TGG + chr4_1:76396309-76396328 None:intergenic 25.0%
!!! CATTAGCTTTTTTCCTTTTT+AGG - chr4_1:76396414-76396433 Msa0573280:CDS 25.0%
!! TGAATATCTTGTTATGTCTA+TGG + chr4_1:76396467-76396486 None:intergenic 25.0%
! ATAGACATAACAAGATATTC+AGG - chr4_1:76396466-76396485 Msa0573280:intron 25.0%
! ATCAGCTAATCGAAAAAATA+GGG + chr4_1:76396700-76396719 None:intergenic 25.0%
! AATCAGCTAATCGAAAAAAT+AGG + chr4_1:76396701-76396720 None:intergenic 25.0%
!!! GAGAAAGTATTTTAATACAG+CGG + chr4_1:76396775-76396794 None:intergenic 25.0%
! TGGTAACATAGTTTATTCTT+AGG - chr4_1:76396926-76396945 Msa0573280:intron 25.0%
! TAACATAGTTTATTCTTAGG+CGG - chr4_1:76396929-76396948 Msa0573280:intron 25.0%
! ATATGATGTTGTTGTAAAGT+TGG - chr4_1:76397172-76397191 Msa0573280:exon 25.0%
!! AAGAGTGGAAATATTTTCAA+TGG + chr4_1:76397336-76397355 None:intergenic 25.0%
TGATTAGATGGAAGAAAAGA+CGG + chr4_1:76391702-76391721 None:intergenic 30.0%
CTCTTTCATTTCCATAACTT+TGG - chr4_1:76391874-76391893 Msa0573280:three_prime_UTR 30.0%
TGAAGAAGAAACCAAAGTTA+TGG + chr4_1:76391888-76391907 None:intergenic 30.0%
! ATTCAATCTTCCTTGTTTCT+CGG + chr4_1:76391984-76392003 None:intergenic 30.0%
!! GCTTACATTCATTTTGTTTC+AGG - chr4_1:76392280-76392299 Msa0573280:intron 30.0%
AAAAATCCAGCATACATGTA+AGG + chr4_1:76392396-76392415 None:intergenic 30.0%
AACATATGAAATGGTGCTTA+CGG + chr4_1:76392543-76392562 None:intergenic 30.0%
TCAAACTACACATGTAAAGT+CGG + chr4_1:76392633-76392652 None:intergenic 30.0%
TTTACATGTGTAGTTTGACA+TGG - chr4_1:76392635-76392654 Msa0573280:intron 30.0%
AAAAATTAGCATACAAGTGG+GGG + chr4_1:76392798-76392817 None:intergenic 30.0%
TAGAACTTCAGAGTTTAATC+AGG - chr4_1:76392846-76392865 Msa0573280:CDS 30.0%
TAAACATACCACGGTATATA+TGG + chr4_1:76392960-76392979 None:intergenic 30.0%
AGATGTATGTAAACATACCA+CGG + chr4_1:76392969-76392988 None:intergenic 30.0%
TATCCATGATATTCTAAACC+AGG - chr4_1:76393083-76393102 Msa0573280:CDS 30.0%
ACTGAGGAAGATAAATTAGT+TGG + chr4_1:76393415-76393434 None:intergenic 30.0%
TGACCTAGGATTATAAAACA+CGG + chr4_1:76393512-76393531 None:intergenic 30.0%
CAATGGAATAACAAATTCTG+AGG + chr4_1:76393630-76393649 None:intergenic 30.0%
!! CTCAGAATTTGTTATTCCAT+TGG - chr4_1:76393628-76393647 Msa0573280:CDS 30.0%
AATCCTTTATGAAGAGAACT+TGG - chr4_1:76393805-76393824 Msa0573280:CDS 30.0%
ATCCTTTATGAAGAGAACTT+GGG - chr4_1:76393806-76393825 Msa0573280:CDS 30.0%
AGGTTGAATATTATAACTGG+AGG - chr4_1:76393829-76393848 Msa0573280:CDS 30.0%
ATTATTGTGATAGGAGATGT+TGG - chr4_1:76393950-76393969 Msa0573280:CDS 30.0%
AGATATATGGGTACAGTTAT+TGG - chr4_1:76394035-76394054 Msa0573280:CDS 30.0%
! CATCTTTTAGCAATTCAATG+AGG - chr4_1:76394126-76394145 Msa0573280:CDS 30.0%
ATTCAAGGTTCATCTACTTA+TGG + chr4_1:76394165-76394184 None:intergenic 30.0%
!! TAAAAATGTTCAGGTTGGTT+GGG - chr4_1:76394246-76394265 Msa0573280:CDS 30.0%
!! AAGGCATTGTATTCTTGAAA+AGG + chr4_1:76394549-76394568 None:intergenic 30.0%
!! TTTTCAAGAATACAATGCCT+TGG - chr4_1:76394548-76394567 Msa0573280:intron 30.0%
!!! AGTTGATTGTTTTGAATGGA+CGG + chr4_1:76394976-76394995 None:intergenic 30.0%
!!! ATGGAGTTGATTGTTTTGAA+TGG + chr4_1:76394980-76394999 None:intergenic 30.0%
CAGTTTCAACAGACTATAAT+TGG - chr4_1:76395027-76395046 Msa0573280:intron 30.0%
TTAATATGATCTGGCATAGT+GGG + chr4_1:76395081-76395100 None:intergenic 30.0%
ATTAATATGATCTGGCATAG+TGG + chr4_1:76395082-76395101 None:intergenic 30.0%
GTTACATATGTCTGATAATC+AGG - chr4_1:76395107-76395126 Msa0573280:intron 30.0%
ATATGTCTGATAATCAGGTT+CGG - chr4_1:76395112-76395131 Msa0573280:intron 30.0%
! TCTAAAATGTCTAGTCATGT+TGG - chr4_1:76395450-76395469 Msa0573280:CDS 30.0%
ATTAGAACTTTGACTCAAGA+TGG + chr4_1:76395691-76395710 None:intergenic 30.0%
CAAGGCTTAACATCATAATT+TGG + chr4_1:76395738-76395757 None:intergenic 30.0%
TAGAGACAACATTCAAAACT+TGG - chr4_1:76395944-76395963 Msa0573280:intron 30.0%
TTGTCAAATGATTTCTCTTC+GGG - chr4_1:76396086-76396105 Msa0573280:intron 30.0%
TCGAATTAAAGGTCATATCA+GGG + chr4_1:76396193-76396212 None:intergenic 30.0%
ATCGAATTAAAGGTCATATC+AGG + chr4_1:76396194-76396213 None:intergenic 30.0%
CAAGAAACCACTATCATTTA+TGG + chr4_1:76396225-76396244 None:intergenic 30.0%
!! CATAAATGATAGTGGTTTCT+TGG - chr4_1:76396223-76396242 Msa0573280:CDS 30.0%
!!! CCTTTTTAGGTATATAAACG+CGG - chr4_1:76396427-76396446 Msa0573280:CDS 30.0%
AGGTATTTATGATGCATTTG+TGG - chr4_1:76396977-76396996 Msa0573280:intron 30.0%
GGTATTTATGATGCATTTGT+GGG - chr4_1:76396978-76396997 Msa0573280:intron 30.0%
GTATTTATGATGCATTTGTG+GGG - chr4_1:76396979-76396998 Msa0573280:intron 30.0%
TATTTATGATGCATTTGTGG+GGG - chr4_1:76396980-76396999 Msa0573280:intron 30.0%
AATTTCACCATCATTTGTTC+TGG + chr4_1:76397053-76397072 None:intergenic 30.0%
CTGCTAATGAATCAAATCTT+CGG - chr4_1:76397106-76397125 Msa0573280:intron 30.0%
TTACAACAACATCATATGCA+TGG + chr4_1:76397169-76397188 None:intergenic 30.0%
AGTTGGAACAAAATTTCTGT+TGG - chr4_1:76397189-76397208 Msa0573280:five_prime_UTR 30.0%
AGAAATTCTTGTCTCTTGAA+AGG - chr4_1:76397257-76397276 Msa0573280:five_prime_UTR 30.0%
! AGAGACAACTTTTCAAACAC+AGG - chr4_1:76391610-76391629 Msa0573280:three_prime_UTR 35.0%
! ACCGTACTTTCACTATTTTC+CGG - chr4_1:76391664-76391683 Msa0573280:three_prime_UTR 35.0%
GAAGATTGAATGAGATGTGT+TGG - chr4_1:76391993-76392012 Msa0573280:three_prime_UTR 35.0%
AAGAGGTGAGTTTACTTGTT+CGG + chr4_1:76392141-76392160 None:intergenic 35.0%
GATTATAATACGGCCATGTT+TGG + chr4_1:76392247-76392266 None:intergenic 35.0%
! CAGCATCTTTGAAGAAAGAT+GGG - chr4_1:76392306-76392325 Msa0573280:intron 35.0%
! AGCATCTTTGAAGAAAGATG+GGG - chr4_1:76392307-76392326 Msa0573280:intron 35.0%
GATTGGAATAGTTTGGTACT+TGG + chr4_1:76392337-76392356 None:intergenic 35.0%
GAAGGAAGATTGGAATAGTT+TGG + chr4_1:76392344-76392363 None:intergenic 35.0%
AAAATTAGCATACAAGTGGG+GGG + chr4_1:76392797-76392816 None:intergenic 35.0%
TAGTAGAGGTCTTGAGAAAT+TGG + chr4_1:76392828-76392847 None:intergenic 35.0%
!! AAACTCTGAAGTTCTAGTAG+AGG + chr4_1:76392842-76392861 None:intergenic 35.0%
AGGATTTGCATGGAAATGTT+TGG - chr4_1:76392926-76392945 Msa0573280:CDS 35.0%
! TGTCCTGGTTTAGAATATCA+TGG + chr4_1:76393089-76393108 None:intergenic 35.0%
ACTGATAAATAGACTCCATC+CGG + chr4_1:76393135-76393154 None:intergenic 35.0%
GTCTATTTATCAGTGGAAAG+AGG - chr4_1:76393141-76393160 Msa0573280:CDS 35.0%
!!! TCCTGATTTTGATTGCTTCT+TGG - chr4_1:76393337-76393356 Msa0573280:CDS 35.0%
TCAAGTGATAGTATGCACAT+TGG - chr4_1:76393439-76393458 Msa0573280:CDS 35.0%
TAGTATGCACATTGGAATTC+TGG - chr4_1:76393447-76393466 Msa0573280:CDS 35.0%
GGATTATAAAACACGGTGAA+GGG + chr4_1:76393505-76393524 None:intergenic 35.0%
AGGATTATAAAACACGGTGA+AGG + chr4_1:76393506-76393525 None:intergenic 35.0%
! TCACCGTGTTTTATAATCCT+AGG - chr4_1:76393506-76393525 Msa0573280:CDS 35.0%
! TTTTTCCTTTCTTTACGTGC+AGG - chr4_1:76393597-76393616 Msa0573280:CDS 35.0%
! TTTTCCTTTCTTTACGTGCA+GGG - chr4_1:76393598-76393617 Msa0573280:CDS 35.0%
! AATAACAAATTCTGAGGGAC+TGG + chr4_1:76393624-76393643 None:intergenic 35.0%
! ATGTTTGAAACAGAAGACTC+AGG - chr4_1:76393710-76393729 Msa0573280:CDS 35.0%
GGGAGGTTGAATATTATAAC+TGG - chr4_1:76393826-76393845 Msa0573280:CDS 35.0%
!! AGTTATTGGTGTTAGTGATC+TGG - chr4_1:76394049-76394068 Msa0573280:CDS 35.0%
AAACTGCTTGAAGTTGAACA+AGG + chr4_1:76394212-76394231 None:intergenic 35.0%
AGCTACACGTAAAAATGTTC+AGG - chr4_1:76394237-76394256 Msa0573280:CDS 35.0%
ACACGTAAAAATGTTCAGGT+TGG - chr4_1:76394241-76394260 Msa0573280:CDS 35.0%
!! GTAAAAATGTTCAGGTTGGT+TGG - chr4_1:76394245-76394264 Msa0573280:CDS 35.0%
ATGAAAAATGGAGCAGTAAC+AGG + chr4_1:76394325-76394344 None:intergenic 35.0%
! TGGTGATGATATGTGTATGA+AGG - chr4_1:76394573-76394592 Msa0573280:CDS 35.0%
! AGATTTTGTACAACAGATGC+AGG + chr4_1:76394700-76394719 None:intergenic 35.0%
TCTGTTGTACAAAATCTTCC+TGG - chr4_1:76394703-76394722 Msa0573280:intron 35.0%
AGTGGAAAATCCCAATTGAT+GGG + chr4_1:76394740-76394759 None:intergenic 35.0%
!! TGATTGAGAGATTTGTTGAG+TGG + chr4_1:76394758-76394777 None:intergenic 35.0%
! TTCTGTCTAGAATGTTGTTC+TGG + chr4_1:76394859-76394878 None:intergenic 35.0%
ACAACATTCTAGACAGAACT+TGG - chr4_1:76394861-76394880 Msa0573280:CDS 35.0%
! AATACTCTGGGGATTAAGTT+GGG + chr4_1:76394920-76394939 None:intergenic 35.0%
ACCAACCGCAAAATATGATT+AGG - chr4_1:76395055-76395074 Msa0573280:intron 35.0%
!!! TGGTTTTGAATAATCTGAGC+AGG + chr4_1:76395207-76395226 None:intergenic 35.0%
AGGAATTTCAAACACTTGAC+GGG + chr4_1:76395283-76395302 None:intergenic 35.0%
GAGGAATTTCAAACACTTGA+CGG + chr4_1:76395284-76395303 None:intergenic 35.0%
TACTATGATCTGTCATCTGA+TGG + chr4_1:76395347-76395366 None:intergenic 35.0%
! ATGTTGAAGCTTTTGTTGCT+TGG + chr4_1:76395400-76395419 None:intergenic 35.0%
GCATTATCAGTATTTACCGA+TGG + chr4_1:76395552-76395571 None:intergenic 35.0%
TATTGTGCTCATAAGGATCT+GGG + chr4_1:76395640-76395659 None:intergenic 35.0%
AGATCCTTATGAGCACAATA+GGG - chr4_1:76395640-76395659 Msa0573280:intron 35.0%
! ATTCACTGGGTTGTGATTTT+CGG + chr4_1:76395772-76395791 None:intergenic 35.0%
TCTGAGGGTAAAAATTCACT+GGG + chr4_1:76395785-76395804 None:intergenic 35.0%
! TCTCTAGAAAACATTGACTG+GGG + chr4_1:76395930-76395949 None:intergenic 35.0%
! GTCTCTAGAAAACATTGACT+GGG + chr4_1:76395931-76395950 None:intergenic 35.0%
! TGTCTCTAGAAAACATTGAC+TGG + chr4_1:76395932-76395951 None:intergenic 35.0%
CATTCAAAACTTGGAAGTTC+AGG - chr4_1:76395953-76395972 Msa0573280:intron 35.0%
CATATGGCAATAGCATGAAT+GGG - chr4_1:76395997-76396016 Msa0573280:CDS 35.0%
TTCCATGGTTTCACAAACAT+GGG - chr4_1:76396163-76396182 Msa0573280:CDS 35.0%
GGTGGAATCAATCGAATTAA+AGG + chr4_1:76396204-76396223 None:intergenic 35.0%
GATTCCACCATAAATGATAG+TGG - chr4_1:76396215-76396234 Msa0573280:CDS 35.0%
GAAACCACTATCATTTATGG+TGG + chr4_1:76396222-76396241 None:intergenic 35.0%
CTAATCCGTTGAAATTGATG+TGG + chr4_1:76396278-76396297 None:intergenic 35.0%
!! ACGGATTAGAACATATACCA+AGG - chr4_1:76396289-76396308 Msa0573280:intron 35.0%
CCGCGTTTATATACCTAAAA+AGG + chr4_1:76396430-76396449 None:intergenic 35.0%
TGAAAATGATGTTCTGCTAG+TGG - chr4_1:76396588-76396607 Msa0573280:CDS 35.0%
GAAAATGATGTTCTGCTAGT+GGG - chr4_1:76396589-76396608 Msa0573280:CDS 35.0%
AAATCTGGTGAGAAAAGAGA+AGG + chr4_1:76396642-76396661 None:intergenic 35.0%
! TTGTTTCTTATGGACATGTC+AGG - chr4_1:76396732-76396751 Msa0573280:intron 35.0%
TGTTTCTTATGGACATGTCA+GGG - chr4_1:76396733-76396752 Msa0573280:intron 35.0%
! ATGAGCTTAGATGGAGATTT+TGG - chr4_1:76396812-76396831 Msa0573280:intron 35.0%
!! TTAGATGGAGATTTTGGCAA+TGG - chr4_1:76396818-76396837 Msa0573280:intron 35.0%
! TTTTTATCCTGCTTCTACAC+TGG - chr4_1:76397014-76397033 Msa0573280:intron 35.0%
AGCAGGTTATATTACCTTCA+TGG + chr4_1:76397091-76397110 None:intergenic 35.0%
CGAAGATTTGATTCATTAGC+AGG + chr4_1:76397108-76397127 None:intergenic 35.0%
CTAATGAATCAAATCTTCGG+TGG - chr4_1:76397109-76397128 Msa0573280:intron 35.0%
GGCTTAAAAACATCTAGCTA+AGG + chr4_1:76397148-76397167 None:intergenic 35.0%
GAGACAAGAATTTCTCTCAA+AGG + chr4_1:76397252-76397271 None:intergenic 35.0%
AATTCTTGTCTCTTGAAAGG+TGG - chr4_1:76397260-76397279 Msa0573280:five_prime_UTR 35.0%
ATTCTTGTCTCTTGAAAGGT+GGG - chr4_1:76397261-76397280 Msa0573280:five_prime_UTR 35.0%
TTACAAAAGGACCAACCAAA+AGG + chr4_1:76397288-76397307 None:intergenic 35.0%
! TGTCTGGTGATGTTTACAAA+AGG + chr4_1:76397301-76397320 None:intergenic 35.0%
GCCGGAAAATAGTGAAAGTA+CGG + chr4_1:76391668-76391687 None:intergenic 40.0%
TTAGATGGAAGAAAAGACGG+CGG + chr4_1:76391699-76391718 None:intergenic 40.0%
! GCTGGTGATTGATGATTAGA+TGG + chr4_1:76391714-76391733 None:intergenic 40.0%
TCTTATGCATCCGAGAAACA+AGG - chr4_1:76391971-76391990 Msa0573280:three_prime_UTR 40.0%
!! ATGAGATGTGTTGGTTTAGC+AGG - chr4_1:76392002-76392021 Msa0573280:three_prime_UTR 40.0%
GGTAAAGGAAGATTGACAAG+AGG + chr4_1:76392083-76392102 None:intergenic 40.0%
CTTGTCAATCTTCCTTTACC+TGG - chr4_1:76392083-76392102 Msa0573280:CDS 40.0%
TTGAGGGAAGTAAACGACAT+GGG + chr4_1:76392111-76392130 None:intergenic 40.0%
! GCAGCATCTTTGAAGAAAGA+TGG - chr4_1:76392305-76392324 Msa0573280:intron 40.0%
! CTTGTTGTATTTGTCCTTCC+AGG - chr4_1:76392463-76392482 Msa0573280:CDS 40.0%
ACATGTAAAGTCGGCAAATC+AGG + chr4_1:76392624-76392643 None:intergenic 40.0%
! TTGCAGAAAAACTCAGGTTG+TGG + chr4_1:76392702-76392721 None:intergenic 40.0%
AGTTGCTTGCAGAAAAACTC+AGG + chr4_1:76392708-76392727 None:intergenic 40.0%
AGAGGTCTTGAGAAATTGGA+AGG + chr4_1:76392824-76392843 None:intergenic 40.0%
ACATACCACGGTATATATGG+CGG + chr4_1:76392957-76392976 None:intergenic 40.0%
GGATGGAGTCTATTTATCAG+TGG - chr4_1:76393134-76393153 Msa0573280:CDS 40.0%
GCCAAGAAGCAATCAAAATC+AGG + chr4_1:76393341-76393360 None:intergenic 40.0%
!! TGAAAAGCAGCAGTTGCTTT+TGG - chr4_1:76393366-76393385 Msa0573280:CDS 40.0%
!!! GAAAAGCAGCAGTTGCTTTT+GGG - chr4_1:76393367-76393386 Msa0573280:CDS 40.0%
!! ACTATCACTTGAGAGTACTG+AGG + chr4_1:76393431-76393450 None:intergenic 40.0%
TAGCAGAATAAAGTCGGTGA+CGG + chr4_1:76393545-76393564 None:intergenic 40.0%
GTATATTGCCCTGTAGTACT+TGG + chr4_1:76393654-76393673 None:intergenic 40.0%
TACAGCCATCAAATATCACC+TGG - chr4_1:76393671-76393690 Msa0573280:CDS 40.0%
CTCCCAAGTTCTCTTCATAA+AGG + chr4_1:76393811-76393830 None:intergenic 40.0%
CTTTATGAAGAGAACTTGGG+AGG - chr4_1:76393809-76393828 Msa0573280:CDS 40.0%
! CTAAAAGGCGTGTATTTACC+AGG + chr4_1:76394397-76394416 None:intergenic 40.0%
AAGAATACAATGCCTTGGCT+TGG - chr4_1:76394553-76394572 Msa0573280:CDS 40.0%
CATACAGCAAAATCCTGCTA+TGG - chr4_1:76394639-76394658 Msa0573280:CDS 40.0%
ATCCGATATTGCCCATCAAT+TGG - chr4_1:76394726-76394745 Msa0573280:intron 40.0%
TCCGATATTGCCCATCAATT+GGG - chr4_1:76394727-76394746 Msa0573280:intron 40.0%
! TCCCAATTGATGGGCAATAT+CGG + chr4_1:76394731-76394750 None:intergenic 40.0%
GAGTGGAAAATCCCAATTGA+TGG + chr4_1:76394741-76394760 None:intergenic 40.0%
! CAATACTCTGGGGATTAAGT+TGG + chr4_1:76394921-76394940 None:intergenic 40.0%
TTCGTTTGGACAATACTCTG+GGG + chr4_1:76394931-76394950 None:intergenic 40.0%
GTTCGTTTGGACAATACTCT+GGG + chr4_1:76394932-76394951 None:intergenic 40.0%
TGTTCGTTTGGACAATACTC+TGG + chr4_1:76394933-76394952 None:intergenic 40.0%
TCTGTTGAAACTGTTGCAGT+GGG + chr4_1:76395020-76395039 None:intergenic 40.0%
! GCCTAATCATATTTTGCGGT+TGG + chr4_1:76395059-76395078 None:intergenic 40.0%
! GTGGGCCTAATCATATTTTG+CGG + chr4_1:76395063-76395082 None:intergenic 40.0%
TAGATGTCACACACAACTCT+AGG - chr4_1:76395247-76395266 Msa0573280:CDS 40.0%
AGATGTCACACACAACTCTA+GGG - chr4_1:76395248-76395267 Msa0573280:CDS 40.0%
GGAATTTCAAACACTTGACG+GGG + chr4_1:76395282-76395301 None:intergenic 40.0%
!!! AGTGAGTTTTGAAGCGTATG+AGG + chr4_1:76395303-76395322 None:intergenic 40.0%
! AGACATTTTAGACAGTGAGC+CGG + chr4_1:76395442-76395461 None:intergenic 40.0%
TGATTAGCAGTAGTTGCAGA+AGG + chr4_1:76395480-76395499 None:intergenic 40.0%
GCTAATCAGTTATCTGCTTC+CGG - chr4_1:76395492-76395511 Msa0573280:CDS 40.0%
CCAACACAGTTATTTGTGGA+AGG + chr4_1:76395594-76395613 None:intergenic 40.0%
CCTTCCACAAATAACTGTGT+TGG - chr4_1:76395591-76395610 Msa0573280:intron 40.0%
CTATTGTGCTCATAAGGATC+TGG + chr4_1:76395641-76395660 None:intergenic 40.0%
CAGATCCTTATGAGCACAAT+AGG - chr4_1:76395639-76395658 Msa0573280:intron 40.0%
GATCCTTATGAGCACAATAG+GGG - chr4_1:76395641-76395660 Msa0573280:intron 40.0%
GTCTGAGGGTAAAAATTCAC+TGG + chr4_1:76395786-76395805 None:intergenic 40.0%
TGCTATCCAGACAGATTGTT+TGG - chr4_1:76395821-76395840 Msa0573280:CDS 40.0%
ACGTATCCAAACAATCTGTC+TGG + chr4_1:76395830-76395849 None:intergenic 40.0%
GACTGGGGATAGTAAGATAA+CGG + chr4_1:76395915-76395934 None:intergenic 40.0%
GCATATGGCAATAGCATGAA+TGG - chr4_1:76395996-76396015 Msa0573280:CDS 40.0%
GCCACTGAATCTAGATTCTA+CGG - chr4_1:76396031-76396050 Msa0573280:CDS 40.0%
ACCGTAGAATCTAGATTCAG+TGG + chr4_1:76396035-76396054 None:intergenic 40.0%
CTAGATTCTACGGTAACCAA+AGG - chr4_1:76396041-76396060 Msa0573280:CDS 40.0%
TCAAATGATTTCTCTTCGGG+AGG - chr4_1:76396089-76396108 Msa0573280:intron 40.0%
CTTGGGGGCTATGAAAATAA+CGG - chr4_1:76396116-76396135 Msa0573280:intron 40.0%
ACCATGGAAGATGAAAGTTC+TGG + chr4_1:76396152-76396171 None:intergenic 40.0%
CTTCCATGGTTTCACAAACA+TGG - chr4_1:76396162-76396181 Msa0573280:CDS 40.0%
TCCATGGTTTCACAAACATG+GGG - chr4_1:76396164-76396183 Msa0573280:CDS 40.0%
! GATAGTGGTTTCTTGGATAG+TGG - chr4_1:76396230-76396249 Msa0573280:CDS 40.0%
! TTTCTTGGATAGTGGTCCAT+GGG - chr4_1:76396238-76396257 Msa0573280:CDS 40.0%
ATCCGTTGAAATTGATGTGG+CGG + chr4_1:76396275-76396294 None:intergenic 40.0%
CGATGAGCTTAAACATGATC+TGG - chr4_1:76396492-76396511 Msa0573280:intron 40.0%
! TTAAACATGATCTGGCTCGT+AGG - chr4_1:76396500-76396519 Msa0573280:intron 40.0%
CTCATCTGTTGAACTTCTTG+AGG + chr4_1:76396797-76396816 None:intergenic 40.0%
GTTCAACAGATGAGCTTAGA+TGG - chr4_1:76396803-76396822 Msa0573280:intron 40.0%
CGCTAACTATTCTTCAGTGT+TGG - chr4_1:76396906-76396925 Msa0573280:intron 40.0%
AAATTTGCCAGTGTAGAAGC+AGG + chr4_1:76397024-76397043 None:intergenic 40.0%
TGAAGAGCCAGAACAAATGA+TGG - chr4_1:76397043-76397062 Msa0573280:intron 40.0%
TTCTTGTCTCTTGAAAGGTG+GGG - chr4_1:76397262-76397281 Msa0573280:five_prime_UTR 40.0%
! AGTGAAAGTACGGTGAACGA+CGG + chr4_1:76391658-76391677 None:intergenic 45.0%
GCAGGAGAAGACAAGAATGA+CGG - chr4_1:76392020-76392039 Msa0573280:three_prime_UTR 45.0%
AAGTAAACGACATGGGTACC+AGG + chr4_1:76392104-76392123 None:intergenic 45.0%
CTTGAGGGAAGTAAACGACA+TGG + chr4_1:76392112-76392131 None:intergenic 45.0%
! CATGTCGTTTACTTCCCTCA+AGG - chr4_1:76392110-76392129 Msa0573280:CDS 45.0%
GTGAGTTTACTTGTTCGGAG+TGG + chr4_1:76392136-76392155 None:intergenic 45.0%
AGGCAACTTGGAAGGAAGAT+TGG + chr4_1:76392354-76392373 None:intergenic 45.0%
AGAGTACAAGGCAACTTGGA+AGG + chr4_1:76392362-76392381 None:intergenic 45.0%
! GTGAAGAGTACAAGGCAACT+TGG + chr4_1:76392366-76392385 None:intergenic 45.0%
! GTGAGACTGTGAAGAGTACA+AGG + chr4_1:76392374-76392393 None:intergenic 45.0%
GTCTCACCTTACATGTATGC+TGG - chr4_1:76392387-76392406 Msa0573280:CDS 45.0%
GCATATACTTCGTCTGTGTC+TGG + chr4_1:76392494-76392513 None:intergenic 45.0%
ACACAGACGAAGTATATGCC+CGG - chr4_1:76392495-76392514 Msa0573280:intron 45.0%
GCTAGTGATACGAGTACTCA+TGG - chr4_1:76392732-76392751 Msa0573280:CDS 45.0%
AGTGATACGAGTACTCATGG+AGG - chr4_1:76392735-76392754 Msa0573280:CDS 45.0%
GGAAAATCTTCTCTGCAGCA+CGG + chr4_1:76392776-76392795 None:intergenic 45.0%
TTTGCCACAAGTTCTTGAGC+AGG + chr4_1:76392907-76392926 None:intergenic 45.0%
TGCTCAAGAACTTGTGGCAA+AGG - chr4_1:76392906-76392925 Msa0573280:CDS 45.0%
CTTGTGGCAAAGGATTTGCA+TGG - chr4_1:76392916-76392935 Msa0573280:CDS 45.0%
AAGTTCCGCCATATATACCG+TGG - chr4_1:76392949-76392968 Msa0573280:CDS 45.0%
GTTGTAAGCAAGTGGCGTTT+CGG + chr4_1:76393113-76393132 None:intergenic 45.0%
AAACGCCACTTGCTTACAAC+CGG - chr4_1:76393113-76393132 Msa0573280:CDS 45.0%
! AGTGGAAAGAGGCTTTTAGC+TGG - chr4_1:76393152-76393171 Msa0573280:CDS 45.0%
ACGGTGACAGATATTGACCT+AGG + chr4_1:76393526-76393545 None:intergenic 45.0%
TTCCATTGGCCAAGTACTAC+AGG - chr4_1:76393642-76393661 Msa0573280:CDS 45.0%
TCCATTGGCCAAGTACTACA+GGG - chr4_1:76393643-76393662 Msa0573280:CDS 45.0%
GCATGCCAGGTGATATTTGA+TGG + chr4_1:76393679-76393698 None:intergenic 45.0%
!! ATCATTCTAAAGCGCATGCC+AGG + chr4_1:76393692-76393711 None:intergenic 45.0%
CAGAAGACTCAGGAACAAGA+AGG - chr4_1:76393720-76393739 Msa0573280:CDS 45.0%
! CTGCGAGTTTTTCCATCTCA+CGG + chr4_1:76394078-76394097 None:intergenic 45.0%
TGAGATGGAAAAACTCGCAG+TGG - chr4_1:76394078-76394097 Msa0573280:CDS 45.0%
GGAGGTGGACAGATGAAAAA+TGG + chr4_1:76394337-76394356 None:intergenic 45.0%
GTGTATTTACCAGGCATTCC+GGG + chr4_1:76394388-76394407 None:intergenic 45.0%
CGTGTATTTACCAGGCATTC+CGG + chr4_1:76394389-76394408 None:intergenic 45.0%
CACATATCATCACCAAGCCA+AGG + chr4_1:76394568-76394587 None:intergenic 45.0%
TATGTGTATGAAGGATCCCC+AGG - chr4_1:76394582-76394601 Msa0573280:CDS 45.0%
ATTGAGCTAAGCTCATGCCA+GGG + chr4_1:76394612-76394631 None:intergenic 45.0%
TTGTACAACAGATGCAGGCA+TGG + chr4_1:76394695-76394714 None:intergenic 45.0%
ATGCTACCATCCACTTCTAG+TGG - chr4_1:76394814-76394833 Msa0573280:intron 45.0%
! ACCATCCACTTCTAGTGGAT+TGG - chr4_1:76394819-76394838 Msa0573280:intron 45.0%
!! CCATCCACTTCTAGTGGATT+GGG - chr4_1:76394820-76394839 Msa0573280:intron 45.0%
!! GGTTCTGAGAGAGACTTCTA+TGG + chr4_1:76394999-76395018 None:intergenic 45.0%
GTCTGTTGAAACTGTTGCAG+TGG + chr4_1:76395021-76395040 None:intergenic 45.0%
TTCAAAACCATGACCAGCAG+AGG - chr4_1:76395217-76395236 Msa0573280:CDS 45.0%
CATCTAATTCTTGCCTCTGC+TGG + chr4_1:76395233-76395252 None:intergenic 45.0%
GGGAGAACTGAACATTGTTC+TGG + chr4_1:76395371-76395390 None:intergenic 45.0%
!! CTTTTGTTGCTTGGCTGGAT+GGG + chr4_1:76395391-76395410 None:intergenic 45.0%
!! TGAAGCTTTTGTTGCTTGGC+TGG + chr4_1:76395396-76395415 None:intergenic 45.0%
CAACAACAGCAAACACAACC+CGG - chr4_1:76395420-76395439 Msa0573280:CDS 45.0%
! GACATTTTAGACAGTGAGCC+GGG + chr4_1:76395441-76395460 None:intergenic 45.0%
TACAGTCCGTATACTGCAAC+CGG + chr4_1:76395514-76395533 None:intergenic 45.0%
! AGTATACGGACTGTAGCAAC+TGG - chr4_1:76395519-76395538 Msa0573280:CDS 45.0%
! GTATACGGACTGTAGCAACT+GGG - chr4_1:76395520-76395539 Msa0573280:CDS 45.0%
GTTATTTGTGGAAGGCGAAG+TGG + chr4_1:76395586-76395605 None:intergenic 45.0%
CATCCCCTATTGTGCTCATA+AGG + chr4_1:76395647-76395666 None:intergenic 45.0%
! TACCCTCAGACTTGCTTGAA+TGG - chr4_1:76395795-76395814 Msa0573280:CDS 45.0%
CACCATTCAAGCAAGTCTGA+GGG + chr4_1:76395800-76395819 None:intergenic 45.0%
! AGCGTGAATCACTCTGAGAA+AGG + chr4_1:76395875-76395894 None:intergenic 45.0%
GAGTGATTCACGCTTTCATC+AGG - chr4_1:76395881-76395900 Msa0573280:intron 45.0%
GCTAGGTGCAATGTTGCATA+TGG - chr4_1:76395981-76396000 Msa0573280:CDS 45.0%
! AACCAAAGGCACAACAAGAC+TGG - chr4_1:76396055-76396074 Msa0573280:intron 45.0%
! ACCAAAGGCACAACAAGACT+GGG - chr4_1:76396056-76396075 Msa0573280:intron 45.0%
! GGAAGATGAAAGTTCTGGCT+GGG + chr4_1:76396147-76396166 None:intergenic 45.0%
! TGGAAGATGAAAGTTCTGGC+TGG + chr4_1:76396148-76396167 None:intergenic 45.0%
GCCAGAACTTTCATCTTCCA+TGG - chr4_1:76396148-76396167 Msa0573280:CDS 45.0%
TCCCCATGTTTGTGAAACCA+TGG + chr4_1:76396168-76396187 None:intergenic 45.0%
! GTTTCTTGGATAGTGGTCCA+TGG - chr4_1:76396237-76396256 Msa0573280:CDS 45.0%
CAACAAACACATGTCAGCGA+TGG - chr4_1:76396343-76396362 Msa0573280:intron 45.0%
GTATATAAACGCGGAGCTGT+GGG - chr4_1:76396436-76396455 Msa0573280:CDS 45.0%
CGCATGAACATAGGCAAATC+TGG + chr4_1:76396657-76396676 None:intergenic 45.0%
! AGGAGTATGCGCATGAACAT+AGG + chr4_1:76396666-76396685 None:intergenic 45.0%
!! GATGGAGATTTTGGCAATGG+TGG - chr4_1:76396821-76396840 Msa0573280:intron 45.0%
!! TGATGGCGGGATTGCTTAAA+CGG - chr4_1:76396871-76396890 Msa0573280:CDS 45.0%
GCTGTCAAGAACTTCCATGA+AGG - chr4_1:76397074-76397093 Msa0573280:intron 45.0%
ATGGTCACAATGTAGCTGTC+TGG + chr4_1:76397317-76397336 None:intergenic 45.0%
AGAAAAGACGGCGGCGAAAT+TGG + chr4_1:76391690-76391709 None:intergenic 50.0%
ATTCATCTGTCTGCGTCAGC+TGG + chr4_1:76391732-76391751 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+TGG + chr4_1:76391582-76391601 None:intergenic 50.0%
GGAGAAGACAAGAATGACGG+TGG - chr4_1:76392023-76392042 Msa0573280:three_prime_UTR 50.0%
GTGGCGTTAACAGTGAGCTA+TGG - chr4_1:76392042-76392061 Msa0573280:exon 50.0%
ACGACATGGGTACCAGGTAA+AGG + chr4_1:76392098-76392117 None:intergenic 50.0%
! ACACTGGCTGAAGTGTCATC+CGG + chr4_1:76392517-76392536 None:intergenic 50.0%
ATGGTGCTTACGGAAGACAC+TGG + chr4_1:76392533-76392552 None:intergenic 50.0%
AAATCTTCTCTGCAGCACGG+CGG + chr4_1:76392773-76392792 None:intergenic 50.0%
ACCTCCTGCTCAAGAACTTG+TGG - chr4_1:76392900-76392919 Msa0573280:CDS 50.0%
TCCATCCGGTTGTAAGCAAG+TGG + chr4_1:76393121-76393140 None:intergenic 50.0%
GTGATCTGGATTCCGTGAGA+TGG - chr4_1:76394063-76394082 Msa0573280:CDS 50.0%
GCGAAGTAGGGTCTCAATCT+GGG - chr4_1:76394291-76394310 Msa0573280:CDS 50.0%
TTGGGTCTGAAGAATGGAGG+TGG + chr4_1:76394352-76394371 None:intergenic 50.0%
CTCTTGGGTCTGAAGAATGG+AGG + chr4_1:76394355-76394374 None:intergenic 50.0%
GGTCTCTTGGGTCTGAAGAA+TGG + chr4_1:76394358-76394377 None:intergenic 50.0%
CATTGAGCTAAGCTCATGCC+AGG + chr4_1:76394613-76394632 None:intergenic 50.0%
CTGGCATGAGCTTAGCTCAA+TGG - chr4_1:76394611-76394630 Msa0573280:CDS 50.0%
TGCAATGAGCTAGCCATAGC+AGG + chr4_1:76394655-76394674 None:intergenic 50.0%
! GGCATGGAAGGCACATGATT+TGG + chr4_1:76394679-76394698 None:intergenic 50.0%
ACAACAGATGCAGGCATGGA+AGG + chr4_1:76394691-76394710 None:intergenic 50.0%
! TGATGGGCAATATCGGATCC+AGG + chr4_1:76394724-76394743 None:intergenic 50.0%
CAATGTAGCCTTCACTGCAC+CGG - chr4_1:76394780-76394799 Msa0573280:intron 50.0%
AATGTAGCCTTCACTGCACC+GGG - chr4_1:76394781-76394800 Msa0573280:intron 50.0%
GAAGTGGATGGTAGCATCTG+AGG + chr4_1:76394811-76394830 None:intergenic 50.0%
CCCAATCCACTAGAAGTGGA+TGG + chr4_1:76394823-76394842 None:intergenic 50.0%
TGCTCCCAATCCACTAGAAG+TGG + chr4_1:76394827-76394846 None:intergenic 50.0%
TGGGTCTGAACTTGACTCTG+CGG + chr4_1:76394901-76394920 None:intergenic 50.0%
ATTCTTGCCTCTGCTGGTCA+TGG + chr4_1:76395227-76395246 None:intergenic 50.0%
GCTTCAAAACTCACTGCTCG+AGG - chr4_1:76395308-76395327 Msa0573280:CDS 50.0%
!! GCTTTTGTTGCTTGGCTGGA+TGG + chr4_1:76395392-76395411 None:intergenic 50.0%
CTGCTTCCGGTTGCAGTATA+CGG - chr4_1:76395505-76395524 Msa0573280:CDS 50.0%
GAAGGCGAAGTGGAACAAGA+TGG + chr4_1:76395576-76395595 None:intergenic 50.0%
CGCGCCAACACAGTTATTTG+TGG + chr4_1:76395598-76395617 None:intergenic 50.0%
! GCTCATAAGGATCTGGGATG+TGG + chr4_1:76395634-76395653 None:intergenic 50.0%
GCACCATTCAAGCAAGTCTG+AGG + chr4_1:76395801-76395820 None:intergenic 50.0%
TGGAAGTTCAGGCTGATGCT+AGG - chr4_1:76395964-76395983 Msa0573280:intron 50.0%
CGTTGAAATTGATGTGGCGG+CGG + chr4_1:76396272-76396291 None:intergenic 50.0%
CGCCGCCACATCAATTTCAA+CGG - chr4_1:76396270-76396289 Msa0573280:CDS 50.0%
GGTATATAAACGCGGAGCTG+TGG - chr4_1:76396435-76396454 Msa0573280:CDS 50.0%
! CATGATCTGGCTCGTAGGTT+TGG - chr4_1:76396505-76396524 Msa0573280:intron 50.0%
! GCTCGTAGGTTTGGTATCGA+GGG - chr4_1:76396514-76396533 Msa0573280:intron 50.0%
! TGGTATCGAGGGACAACTAG+AGG - chr4_1:76396525-76396544 Msa0573280:intron 50.0%
CTAGAGGATCGACAACGAGT+AGG - chr4_1:76396541-76396560 Msa0573280:intron 50.0%
AGGATCGACAACGAGTAGGT+TGG - chr4_1:76396545-76396564 Msa0573280:intron 50.0%
! GGCAGAGTACTTACTCCCAA+GGG + chr4_1:76396621-76396640 None:intergenic 50.0%
! AGGCAGAGTACTTACTCCCA+AGG + chr4_1:76396622-76396641 None:intergenic 50.0%
!! GATGGCGGGATTGCTTAAAC+GGG - chr4_1:76396872-76396891 Msa0573280:CDS 50.0%
! ATGGCGGGATTGCTTAAACG+GGG - chr4_1:76396873-76396892 Msa0573280:CDS 50.0%
GGATTGCTTAAACGGGGTCT+AGG - chr4_1:76396879-76396898 Msa0573280:CDS 50.0%
ATGCATTTGTGGGGGTTCTG+TGG - chr4_1:76396988-76397007 Msa0573280:intron 50.0%
! TCTTGAAAGGTGGGGCCTTT+TGG - chr4_1:76397270-76397289 Msa0573280:five_prime_UTR 50.0%
AGAGAGAGAGTGGTGACCTG+CGG + chr4_1:76391824-76391843 None:intergenic 55.0%
GAGCTATGGCAAGCTTGTGC+TGG - chr4_1:76392056-76392075 Msa0573280:exon 55.0%
! CTTGTTCGGAGTGGCCTTGA+GGG + chr4_1:76392127-76392146 None:intergenic 55.0%
! ACTTGTTCGGAGTGGCCTTG+AGG + chr4_1:76392128-76392147 None:intergenic 55.0%
TGTGTCTGGATCTGCCTGGA+AGG + chr4_1:76392480-76392499 None:intergenic 55.0%
! CACTGGCTGAAGTGTCATCC+GGG + chr4_1:76392516-76392535 None:intergenic 55.0%
AATCTTCTCTGCAGCACGGC+GGG + chr4_1:76392772-76392791 None:intergenic 55.0%
GCCACAAGTTCTTGAGCAGG+AGG + chr4_1:76392904-76392923 None:intergenic 55.0%
AAGTGGCGTTTCGGTTGTCC+TGG + chr4_1:76393104-76393123 None:intergenic 55.0%
GCCACTTGCTTACAACCGGA+TGG - chr4_1:76393117-76393136 Msa0573280:CDS 55.0%
CTGGCCCTGCACGTAAAGAA+AGG + chr4_1:76393605-76393624 None:intergenic 55.0%
GCCCTGTAGTACTTGGCCAA+TGG + chr4_1:76393647-76393666 None:intergenic 55.0%
CTCGCAGTGGCGAAATTTGC+AGG - chr4_1:76394091-76394110 Msa0573280:CDS 55.0%
GGCGAAGTAGGGTCTCAATC+TGG - chr4_1:76394290-76394309 Msa0573280:CDS 55.0%
CCGGGTTGTCTTGGTCTCTT+GGG + chr4_1:76394370-76394389 None:intergenic 55.0%
CCCAAGAGACCAAGACAACC+CGG - chr4_1:76394367-76394386 Msa0573280:CDS 55.0%
TCCGGGTTGTCTTGGTCTCT+TGG + chr4_1:76394371-76394390 None:intergenic 55.0%
ATGTAGCCTTCACTGCACCG+GGG - chr4_1:76394782-76394801 Msa0573280:intron 55.0%
AGCAACTGGGACAGTGCCAT+CGG - chr4_1:76395533-76395552 Msa0573280:CDS 55.0%
! ATCTGGGATGTGGTCACTGG+AGG + chr4_1:76395624-76395643 None:intergenic 55.0%
! AGGATCTGGGATGTGGTCAC+TGG + chr4_1:76395627-76395646 None:intergenic 55.0%
GAGCACAATAGGGGATGACG+TGG - chr4_1:76395650-76395669 Msa0573280:intron 55.0%
!! GCCCAGTCTTGTTGTGCCTT+TGG + chr4_1:76396060-76396079 None:intergenic 55.0%
AGGCACAACAAGACTGGGCA+AGG - chr4_1:76396061-76396080 Msa0573280:intron 55.0%
! TTCTCTTCGGGAGGCTTGCT+TGG - chr4_1:76396098-76396117 Msa0573280:intron 55.0%
! TCTCTTCGGGAGGCTTGCTT+GGG - chr4_1:76396099-76396118 Msa0573280:intron 55.0%
TGAAATTGATGTGGCGGCGG+CGG + chr4_1:76396269-76396288 None:intergenic 55.0%
ATAAACGCGGAGCTGTGGGA+AGG - chr4_1:76396440-76396459 Msa0573280:CDS 55.0%
! GGCTCGTAGGTTTGGTATCG+AGG - chr4_1:76396513-76396532 Msa0573280:intron 55.0%
TGCTAGTGGGAGATGACCCT+TGG - chr4_1:76396602-76396621 Msa0573280:CDS 55.0%
GCTAGTGGGAGATGACCCTT+GGG - chr4_1:76396603-76396622 Msa0573280:CDS 55.0%
CAATGGTGGCCTTCCAAGAC+AGG - chr4_1:76396835-76396854 Msa0573280:intron 55.0%
! TGCTACTGGCCTGTCTTGGA+AGG + chr4_1:76396847-76396866 None:intergenic 55.0%
! GAAAGGTGGGGCCTTTTGGT+TGG - chr4_1:76397274-76397293 Msa0573280:five_prime_UTR 55.0%
AAGACGGCGGCGAAATTGGC+CGG + chr4_1:76391686-76391705 None:intergenic 60.0%
CAAACCAATGACCACCGCGC+AGG - chr4_1:76391762-76391781 Msa0573280:three_prime_UTR 60.0%
TCTTCCTGCGCGGTGGTCAT+TGG + chr4_1:76391769-76391788 None:intergenic 60.0%
ATGACCACCGCGCAGGAAGA+AGG - chr4_1:76391769-76391788 Msa0573280:three_prime_UTR 60.0%
GAGAGAGAGTGGTGACCTGC+GGG + chr4_1:76391823-76391842 None:intergenic 60.0%
CGTCTGTGTCTGGATCTGCC+TGG + chr4_1:76392484-76392503 None:intergenic 60.0%
ATCTTCTCTGCAGCACGGCG+GGG + chr4_1:76392771-76392790 None:intergenic 60.0%
GTTGGGATGAAGCCACCGCT+GGG - chr4_1:76394263-76394282 Msa0573280:CDS 60.0%
TTGGGATGAAGCCACCGCTG+GGG - chr4_1:76394264-76394283 Msa0573280:CDS 60.0%
ATGAAGCCACCGCTGGGGAA+AGG - chr4_1:76394269-76394288 Msa0573280:CDS 60.0%
CCTACTTCGCCTTTCCCCAG+CGG + chr4_1:76394281-76394300 None:intergenic 60.0%
CGCTGGGGAAAGGCGAAGTA+GGG - chr4_1:76394279-76394298 Msa0573280:CDS 60.0%
CCAGGCATTCCGGGTTGTCT+TGG + chr4_1:76394379-76394398 None:intergenic 60.0%
CCAAGACAACCCGGAATGCC+TGG - chr4_1:76394376-76394395 Msa0573280:CDS 60.0%
AAGGATCCCCAGGCTTTCCC+TGG - chr4_1:76394592-76394611 Msa0573280:CDS 60.0%
CTCATGCCAGGGAAAGCCTG+GGG + chr4_1:76394601-76394620 None:intergenic 60.0%
GCTCATGCCAGGGAAAGCCT+GGG + chr4_1:76394602-76394621 None:intergenic 60.0%
AGCTCATGCCAGGGAAAGCC+TGG + chr4_1:76394603-76394622 None:intergenic 60.0%
! GGTAGCATCTGAGGCATCCC+CGG + chr4_1:76394802-76394821 None:intergenic 60.0%
! CTCTTCGGGAGGCTTGCTTG+GGG - chr4_1:76396100-76396119 Msa0573280:intron 60.0%
! TCTTCGGGAGGCTTGCTTGG+GGG - chr4_1:76396101-76396120 Msa0573280:intron 60.0%
! GAGCTGCTACTGGCCTGTCT+TGG + chr4_1:76396851-76396870 None:intergenic 60.0%
! CAGGCCAGTAGCAGCTCTGA+TGG - chr4_1:76396854-76396873 Msa0573280:CDS 60.0%
! GCCAGTAGCAGCTCTGATGG+CGG - chr4_1:76396857-76396876 Msa0573280:CDS 60.0%
! CCAGTAGCAGCTCTGATGGC+GGG - chr4_1:76396858-76396877 Msa0573280:CDS 60.0%
GGAGGGACCTTCTTCCTGCG+CGG + chr4_1:76391779-76391798 None:intergenic 65.0%
GTGGTGACCTGCGGGAGCTA+CGG + chr4_1:76391815-76391834 None:intergenic 65.0%
GGTTGGGATGAAGCCACCGC+TGG - chr4_1:76394262-76394281 Msa0573280:CDS 65.0%
ACTTCGCCTTTCCCCAGCGG+TGG + chr4_1:76394278-76394297 None:intergenic 65.0%
CCGCTGGGGAAAGGCGAAGT+AGG - chr4_1:76394278-76394297 Msa0573280:CDS 65.0%
AGGCATCCCCGGTGCAGTGA+AGG + chr4_1:76394791-76394810 None:intergenic 65.0%
AATTGATGTGGCGGCGGCGG+CGG + chr4_1:76396266-76396285 None:intergenic 65.0%
CCCGCCATCAGAGCTGCTAC+TGG + chr4_1:76396861-76396880 None:intergenic 65.0%
GGGACCTTCTTCCTGCGCGG+TGG + chr4_1:76391776-76391795 None:intergenic 70.0%
GTGACCTGCGGGAGCTACGG+CGG + chr4_1:76391812-76391831 None:intergenic 70.0%
! AGCTACGGCGGCGATGGCGG+CGG + chr4_1:76391800-76391819 None:intergenic 75.0%
GGGAGCTACGGCGGCGATGG+CGG + chr4_1:76391803-76391822 None:intergenic 75.0%
TGCGGGAGCTACGGCGGCGA+TGG + chr4_1:76391806-76391825 None:intergenic 75.0%
ATCGCCGCCGTAGCTCCCGC+AGG - chr4_1:76391805-76391824 Msa0573280:three_prime_UTR 75.0%
!! ACGGCGGCGATGGCGGCGGA+GGG + chr4_1:76391796-76391815 None:intergenic 80.0%
!! TACGGCGGCGATGGCGGCGG+AGG + chr4_1:76391797-76391816 None:intergenic 80.0%
! GGCGGCGGCGGCGGAGCCCA+TGG + chr4_1:76396257-76396276 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 76391582 76397365 76391582 ID=Msa0573280;Name=Msa0573280
chr4_1 mRNA 76391582 76397365 76391582 ID=Msa0573280-mRNA-1;Parent=Msa0573280;Name=Msa0573280-mRNA-1;_AED=0.09;_eAED=0.09;_QI=187|0.92|0.85|1|1|1|14|476|1074
chr4_1 exon 76391582 76392193 76391582 ID=Msa0573280-mRNA-1:exon:26748;Parent=Msa0573280-mRNA-1
chr4_1 exon 76392321 76392511 76392321 ID=Msa0573280-mRNA-1:exon:26747;Parent=Msa0573280-mRNA-1
chr4_1 exon 76392637 76394426 76392637 ID=Msa0573280-mRNA-1:exon:26746;Parent=Msa0573280-mRNA-1
chr4_1 exon 76394550 76394688 76394550 ID=Msa0573280-mRNA-1:exon:26745;Parent=Msa0573280-mRNA-1
chr4_1 exon 76394835 76394910 76394835 ID=Msa0573280-mRNA-1:exon:26744;Parent=Msa0573280-mRNA-1
chr4_1 exon 76395206 76395328 76395206 ID=Msa0573280-mRNA-1:exon:26743;Parent=Msa0573280-mRNA-1
chr4_1 exon 76395420 76395584 76395420 ID=Msa0573280-mRNA-1:exon:26742;Parent=Msa0573280-mRNA-1
chr4_1 exon 76395752 76395842 76395752 ID=Msa0573280-mRNA-1:exon:26741;Parent=Msa0573280-mRNA-1
chr4_1 exon 76395977 76396061 76395977 ID=Msa0573280-mRNA-1:exon:26740;Parent=Msa0573280-mRNA-1
chr4_1 exon 76396144 76396299 76396144 ID=Msa0573280-mRNA-1:exon:26739;Parent=Msa0573280-mRNA-1
chr4_1 exon 76396406 76396462 76396406 ID=Msa0573280-mRNA-1:exon:26738;Parent=Msa0573280-mRNA-1
chr4_1 exon 76396547 76396623 76396547 ID=Msa0573280-mRNA-1:exon:26737;Parent=Msa0573280-mRNA-1
chr4_1 exon 76396843 76396923 76396843 ID=Msa0573280-mRNA-1:exon:26736;Parent=Msa0573280-mRNA-1
chr4_1 exon 76397121 76397365 76397121 ID=Msa0573280-mRNA-1:exon:26735;Parent=Msa0573280-mRNA-1
chr4_1 five_prime_UTR 76397179 76397365 76397179 ID=Msa0573280-mRNA-1:five_prime_utr;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76397121 76397178 76397121 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76396843 76396923 76396843 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76396547 76396623 76396547 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76396406 76396462 76396406 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76396144 76396299 76396144 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76395977 76396061 76395977 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76395752 76395842 76395752 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76395420 76395584 76395420 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76395206 76395328 76395206 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76394835 76394910 76394835 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76394550 76394688 76394550 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76392637 76394426 76392637 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76392321 76392511 76392321 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 CDS 76392058 76392193 76392058 ID=Msa0573280-mRNA-1:cds;Parent=Msa0573280-mRNA-1
chr4_1 three_prime_UTR 76391582 76392057 76391582 ID=Msa0573280-mRNA-1:three_prime_utr;Parent=Msa0573280-mRNA-1
Gene Sequence

>Msa0573280

ATGACCACCGCGCAGGAAGAAGGTCCCTCCGCCGCCATCGCCGCCGTAGCTCCCGCAGGAGAAGACAAGAATGACGGTGGCGTTAACAGTGAGCTATGGCAAGCTTGTGCTGGTCCTCTTGTCAATCTTCCTTTACCTGATGGGGATGTCCAAGTACCAAACTATTCCAATCTTCCTTCCAAGTTGCCTTGTACTCTTCACAGTCTCACCTTACATGCAGATCCAGACACAGACGAAGTATATGCCCGGATGACACTTCAGCCAGTGTCTTCCTTTGACATGGATGCCATATTAAGATCAGATATTTCTCTCAAGTCGAACAAGCCACAACCTGAGTTTTTCTGCAAGCAACTGACAGCTAGTGATACGAGTACTCATGGAGGTTTCTCTGTACCCCGCCGTGCTGCAGAGAAGATTTTCCCCCCACTTGATTTCTCAGTGCAACCTCCTGCTCAAGAACTTGTGGCAAAGGATTTGCATGGAAATGTTTGGAAGTTCCGCCATATATACCGTGGACAACCGAAACGCCACTTGCTTACAACCGGATGGAGTCTATTTATCAGTGGAAAGAGGCTTTTAGCTGGAGACTCTGTTTTATTTATACGAGATGAAAAGCAGCAGTTGCTTTTGGGTATCAGACGAGCAAACAGACAACCAACTAATTTATCTTCCTCAGTACTCTCAAGTGATAGTATGCACATTGGAATTCTGGCTGCAGCAGCTCATGCTAGTGCAAACAATAGTCCCTTCACCGTGTTTTATAATCCTAGGGCCAGTCCCTCAGAATTTGTTATTCCATTGGCCAAGTACTACAGGGCAATATACAGCCATCAAATATCACCTGGCATGCGCTTTAGAATGATGTTTGAAACAGAAGACTCAGGAACAAGAAGATATATGGGTACAGTTATTGGTGTTAGTGATCTGGATTCCGTGAGATGGAAAAACTCGCAGTGGCGAAATTTGCAGGTTGGTTGGGATGAAGCCACCGCTGGGGAAAGGCGAAGTAGGGTCTCAATCTGGGAAATTGAACCTGTTACTGCTCCATTTTTCATCTGTCCACCTCCATTCTTCAGACCCAAGAGACCAAGACAACCCGGAATGCCTGACGATGAGTCATTTGATTTCAGTAACCTTTTCAAGAATACAATGCCTTGGCTTGGTGATGATATGTGTATGAAGGATCCCCAGGCTTTCCCTGGCATGAGCTTAGCTCAATGGATGAACATACAGCAAAATCCTGCTATGGCTAGCTCATTGCAACCAAATCATGTGCCTTCCATGCCTGCATCTGTTGTACAAAATCTTCCTGGATCCGATATTGCCCATCAATTGGGATTTTCCACTCAACAAATCTCTCAATCAAACAATGTAGCCTTCACTGCACCGGGGATGCCTCAGATGCTACCATCCACTTCTAGTGGATTGGGAGCAGTCATGCAGCCAGAACAACATTCTAGACAGAACTTGGCATATCAAACTCTACCGCAGAGTCAAGTTCAGACCCAACTTAATCCCCAGAGTATTGTCCAAACGAACAATATTCTTCAATCACAACAACCGTCCATTCAAAACAATCAACTCCATAGAAGTCTCTCTCAGAACCCACTGCAACAGTTTCAACAGACTATAATTGGGCAAAACCAACCGCAAAATATGATTAGGCCCACTATGCCAGATCATATTAATCAACAGTTACATATGTCTGATAATCAGGTTCGGCTTCAGTTGTTACAGAAGCTTCAACAGCAACAACAGACACTCTTGTCTCAGCAATCTGCATTGCAGCAGCCTGCTCAGATTATTCAAAACCATGACCAGCAGAGGCAAGAATTAGATGTCACACACAACTCTAGGGCAATAACTCCCCGTCAAGTGTTTGAAATTCCTCATACGCTTCAAAACTCACTGCTCGAGGCTAATTCTATGAACCATCAGATGACAGATCATAGTAGCCAGAACAATGTTCAGTTCTCCCATCCAGCCAAGCAACAAAAGCTTCAACATCAACAACAGCAAACACAACCCGGCTCACTGTCTAAAATGTCTAGTCATGTTGGACTTCCTTCTGCAACTACTGCTAATCAGTTATCTGCTTCCGGTTGCAGTATACGGACTGTAGCAACTGGGACAGTGCCATCGGTAAATACTGATAATGCTCCATCTTGTTCCACTTCGCCTTCCACAAATAACTGTGTTGGCGCGCTTCCTCCAGTGACCACATCCCAGATCCTTATGAGCACAATAGGGGATGACGTGGCTCAGTCTGCTGCGACCATCTTGAGTCAAAGTTCTAATGCAAATATGGTAAAATATGCACAGCCAAATTATGATGTTAAGCCTTGTTTAAACATTTCCGAAAATCACAACCCAGTGAATTTTTACCCTCAGACTTGCTTGAATGGTGCTGCTATCCAGACAGATTGTTTGGATACGTCGTCTTCTTCAACTTCAGTTTGCCTTTCTCAGAGTGATTCACGCTTTCATCAGGCTGACAAACCGTTATCTTACTATCCCCAGTCAATGTTTTCTAGAGACAACATTCAAAACTTGGAAGTTCAGGCTGATGCTAGGTGCAATGTTGCATATGGCAATAGCATGAATGGGCAAATGAGAATGCCACTGAATCTAGATTCTACGGTAACCAAAGGCACAACAAGACTGGGCAAGGATTTGTCAAATGATTTCTCTTCGGGAGGCTTGCTTGGGGGCTATGAAAATAACGGTGATGCCCAGCCAGAACTTTCATCTTCCATGGTTTCACAAACATGGGGAGTCCCTGATATGACCTTTAATTCGATTGATTCCACCATAAATGATAGTGGTTTCTTGGATAGTGGTCCATGGGCTCCGCCGCCGCCGCCACATCAATTTCAACGGATTAGAACATATACCAAGGTATATAAACGCGGAGCTGTGGGAAGGTCCATAGACATAACAAGATATTCAGGTTACGATGAGCTTAAACATGATCTGGCTCGTAGGTTTGGTATCGAGGGACAACTAGAGGATCGACAACGAGTAGGTTGGAAACTTGTTTATGTAGATCATGAAAATGATGTTCTGCTAGTGGGAGATGACCCTTGGGAGGAGTTTGTCAATTGTGTCCGCTGTATTAAAATACTTTCTCCTCAAGAAGTTCAACAGATGAGCTTAGATGGAGATTTTGGCAATGGTGGCCTTCCAAGACAGGCCAGTAGCAGCTCTGATGGCGGGATTGCTTAA
Protein sequence

>Msa0573280

MTTAQEEGPSAAIAAVAPAGEDKNDGGVNSELWQACAGPLVNLPLPDGDVQVPNYSNLPSKLPCTLHSLTLHADPDTDEVYARMTLQPVSSFDMDAILRSDISLKSNKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSVQPPAQELVAKDLHGNVWKFRHIYRGQPKRHLLTTGWSLFISGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHASANNSPFTVFYNPRASPSEFVIPLAKYYRAIYSHQISPGMRFRMMFETEDSGTRRYMGTVIGVSDLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVTAPFFICPPPFFRPKRPRQPGMPDDESFDFSNLFKNTMPWLGDDMCMKDPQAFPGMSLAQWMNIQQNPAMASSLQPNHVPSMPASVVQNLPGSDIAHQLGFSTQQISQSNNVAFTAPGMPQMLPSTSSGLGAVMQPEQHSRQNLAYQTLPQSQVQTQLNPQSIVQTNNILQSQQPSIQNNQLHRSLSQNPLQQFQQTIIGQNQPQNMIRPTMPDHINQQLHMSDNQVRLQLLQKLQQQQQTLLSQQSALQQPAQIIQNHDQQRQELDVTHNSRAITPRQVFEIPHTLQNSLLEANSMNHQMTDHSSQNNVQFSHPAKQQKLQHQQQQTQPGSLSKMSSHVGLPSATTANQLSASGCSIRTVATGTVPSVNTDNAPSCSTSPSTNNCVGALPPVTTSQILMSTIGDDVAQSAATILSQSSNANMVKYAQPNYDVKPCLNISENHNPVNFYPQTCLNGAAIQTDCLDTSSSSTSVCLSQSDSRFHQADKPLSYYPQSMFSRDNIQNLEVQADARCNVAYGNSMNGQMRMPLNLDSTVTKGTTRLGKDLSNDFSSGGLLGGYENNGDAQPELSSSMVSQTWGVPDMTFNSIDSTINDSGFLDSGPWAPPPPPHQFQRIRTYTKVYKRGAVGRSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNGGLPRQASSSSDGGIA*