Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573430 | XP_003630638.1 | 91.815 | 281 | 15 | 4 | 1 | 274 | 1 | 280 | 9.70e-164 | 465 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573430 | sp|Q7XC57|MYBS3_ORYSJ | 50.877 | 171 | 65 | 5 | 4 | 169 | 3 | 159 | 3.19e-45 | 157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573430 | G7LJK1 | 91.815 | 281 | 15 | 4 | 1 | 274 | 1 | 280 | 4.63e-164 | 465 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0573430 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573430 | MtrunA17_Chr8g0389241 | 91.815 | 281 | 15 | 4 | 1 | 274 | 1 | 280 | 8.92e-168 | 465 |
| Msa0573430 | MtrunA17_Chr6g0488471 | 52.288 | 306 | 97 | 13 | 1 | 274 | 1 | 289 | 1.29e-74 | 229 |
| Msa0573430 | MtrunA17_Chr2g0331031 | 52.809 | 178 | 66 | 5 | 4 | 169 | 3 | 174 | 7.85e-46 | 157 |
| Msa0573430 | MtrunA17_Chr4g0055931 | 47.826 | 184 | 66 | 7 | 4 | 176 | 3 | 167 | 5.52e-43 | 149 |
| Msa0573430 | MtrunA17_Chr5g0415191 | 45.714 | 175 | 72 | 5 | 4 | 168 | 5 | 166 | 2.73e-38 | 136 |
| Msa0573430 | MtrunA17_Chr4g0062741 | 65.823 | 79 | 26 | 1 | 99 | 176 | 132 | 210 | 1.20e-32 | 121 |
| Msa0573430 | MtrunA17_Chr3g0135671 | 42.941 | 170 | 79 | 3 | 4 | 170 | 5 | 159 | 7.80e-32 | 117 |
| Msa0573430 | MtrunA17_Chr1g0162081 | 64.557 | 79 | 27 | 1 | 99 | 176 | 116 | 194 | 2.69e-31 | 117 |
| Msa0573430 | MtrunA17_Chr5g0429521 | 71.622 | 74 | 20 | 1 | 96 | 168 | 123 | 196 | 1.12e-30 | 116 |
| Msa0573430 | MtrunA17_Chr3g0104071 | 72.603 | 73 | 19 | 1 | 97 | 168 | 139 | 211 | 1.19e-30 | 116 |
| Msa0573430 | MtrunA17_Chr7g0241761 | 74.648 | 71 | 17 | 1 | 99 | 168 | 134 | 204 | 3.16e-30 | 115 |
| Msa0573430 | MtrunA17_Chr1g0210471 | 62.353 | 85 | 31 | 1 | 85 | 168 | 104 | 188 | 3.96e-29 | 110 |
| Msa0573430 | MtrunA17_Chr4g0059701 | 81.132 | 53 | 10 | 0 | 99 | 151 | 78 | 130 | 3.52e-27 | 106 |
| Msa0573430 | MtrunA17_Chr5g0436501 | 63.158 | 76 | 25 | 1 | 96 | 168 | 116 | 191 | 1.84e-26 | 104 |
| Msa0573430 | MtrunA17_Chr3g0092621 | 63.768 | 69 | 24 | 1 | 105 | 172 | 84 | 152 | 3.70e-26 | 101 |
| Msa0573430 | MtrunA17_Chr6g0452791 | 77.083 | 48 | 11 | 0 | 105 | 152 | 80 | 127 | 8.16e-22 | 89.7 |
| Msa0573430 | MtrunA17_Chr5g0409841 | 53.947 | 76 | 32 | 2 | 101 | 173 | 88 | 163 | 4.60e-19 | 83.6 |
| Msa0573430 | MtrunA17_Chr5g0440731 | 50.617 | 81 | 36 | 2 | 97 | 173 | 97 | 177 | 7.77e-19 | 84.3 |
| Msa0573430 | MtrunA17_Chr5g0440741 | 56.338 | 71 | 27 | 2 | 107 | 173 | 102 | 172 | 5.53e-18 | 81.6 |
| Msa0573430 | MtrunA17_Chr5g0409831 | 58.929 | 56 | 23 | 0 | 101 | 156 | 73 | 128 | 2.11e-16 | 76.3 |
| Msa0573430 | MtrunA17_Chr8g0365011 | 45.122 | 82 | 30 | 2 | 107 | 173 | 94 | 175 | 1.04e-13 | 69.7 |
| Msa0573430 | MtrunA17_Chr8g0364731 | 56.452 | 62 | 24 | 1 | 115 | 173 | 11 | 72 | 1.24e-13 | 67.8 |
| Msa0573430 | MtrunA17_Chr1g0192061 | 50.000 | 64 | 27 | 3 | 107 | 166 | 63 | 125 | 4.41e-12 | 63.5 |
| Msa0573430 | MtrunA17_Chr5g0432921 | 53.125 | 64 | 25 | 3 | 107 | 166 | 115 | 177 | 3.95e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573430 | AT5G56840.1 | 54.348 | 184 | 52 | 5 | 1 | 174 | 1 | 162 | 2.04e-52 | 171 |
| Msa0573430 | AT5G61620.1 | 47.093 | 172 | 75 | 4 | 4 | 168 | 10 | 172 | 1.48e-43 | 150 |
| Msa0573430 | AT5G47390.1 | 42.584 | 209 | 97 | 5 | 4 | 208 | 3 | 192 | 3.81e-43 | 150 |
| Msa0573430 | AT1G70000.1 | 46.409 | 181 | 62 | 6 | 4 | 169 | 3 | 163 | 8.35e-39 | 137 |
| Msa0573430 | AT1G70000.2 | 46.409 | 181 | 62 | 6 | 4 | 169 | 3 | 163 | 8.35e-39 | 137 |
| Msa0573430 | AT3G16350.1 | 43.810 | 210 | 64 | 7 | 4 | 169 | 3 | 202 | 1.75e-35 | 131 |
| Msa0573430 | AT1G49010.1 | 60.870 | 92 | 33 | 2 | 99 | 187 | 128 | 219 | 3.72e-32 | 120 |
| Msa0573430 | AT5G01200.1 | 68.293 | 82 | 23 | 2 | 90 | 168 | 129 | 210 | 6.09e-31 | 116 |
| Msa0573430 | AT5G08520.1 | 64.198 | 81 | 26 | 2 | 99 | 176 | 112 | 192 | 8.67e-31 | 117 |
| Msa0573430 | AT5G58900.1 | 71.233 | 73 | 20 | 1 | 97 | 168 | 133 | 205 | 9.15e-30 | 114 |
| Msa0573430 | AT2G38090.1 | 72.857 | 70 | 18 | 1 | 100 | 168 | 136 | 205 | 2.11e-29 | 113 |
| Msa0573430 | AT3G11280.2 | 54.128 | 109 | 43 | 3 | 96 | 199 | 118 | 224 | 3.91e-28 | 108 |
| Msa0573430 | AT3G11280.1 | 54.128 | 109 | 43 | 3 | 96 | 199 | 118 | 224 | 3.91e-28 | 108 |
| Msa0573430 | AT5G04760.1 | 67.143 | 70 | 22 | 1 | 100 | 168 | 94 | 163 | 1.88e-27 | 105 |
| Msa0573430 | AT5G05790.2 | 66.216 | 74 | 24 | 1 | 96 | 168 | 122 | 195 | 1.88e-26 | 104 |
| Msa0573430 | AT5G05790.1 | 66.216 | 74 | 24 | 1 | 96 | 168 | 122 | 195 | 1.88e-26 | 104 |
| Msa0573430 | AT1G19000.2 | 82.353 | 51 | 9 | 0 | 101 | 151 | 98 | 148 | 1.29e-25 | 102 |
| Msa0573430 | AT1G19000.1 | 82.353 | 51 | 9 | 0 | 101 | 151 | 98 | 148 | 1.29e-25 | 102 |
| Msa0573430 | AT1G74840.2 | 78.846 | 52 | 11 | 0 | 100 | 151 | 91 | 142 | 7.60e-25 | 99.8 |
| Msa0573430 | AT1G74840.1 | 78.846 | 52 | 11 | 0 | 100 | 151 | 91 | 142 | 1.18e-24 | 99.8 |
| Msa0573430 | AT3G10580.2 | 50.000 | 96 | 45 | 3 | 101 | 195 | 91 | 184 | 3.06e-21 | 90.5 |
| Msa0573430 | AT3G10580.1 | 50.000 | 96 | 45 | 3 | 101 | 195 | 91 | 184 | 4.48e-21 | 90.5 |
| Msa0573430 | AT5G23650.1 | 55.263 | 76 | 33 | 1 | 99 | 173 | 114 | 189 | 1.18e-20 | 90.1 |
| Msa0573430 | AT4G09450.1 | 66.038 | 53 | 18 | 0 | 101 | 153 | 87 | 139 | 2.18e-17 | 79.0 |
| Msa0573430 | AT3G10590.1 | 47.674 | 86 | 41 | 3 | 101 | 183 | 105 | 189 | 6.13e-15 | 72.0 |
Find 85 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATATTAAGTGACGCTAAT+TGG | 0.141998 | 4_1:+76621175 | None:intergenic |
| CCTGCTGGCTCATTCCTTCT+TGG | 0.142813 | 4_1:-76621199 | Msa0573430:CDS |
| GTTAATTAATTAATGGAAAA+TGG | 0.174617 | 4_1:+76622901 | None:intergenic |
| TGCTAATTCAGTAGTAAAAT+TGG | 0.226629 | 4_1:-76621440 | Msa0573430:CDS |
| TTGGAGGACTTCGTCTCTTC+GGG | 0.227891 | 4_1:-76622665 | Msa0573430:CDS |
| TTGTGCAGCAGTGCCTAATT+TGG | 0.253498 | 4_1:-76621272 | Msa0573430:CDS |
| ATAATTACTCTACAGATAAT+TGG | 0.274738 | 4_1:-76621312 | Msa0573430:CDS |
| TATACCTTTCTTTCTCTCTT+GGG | 0.282804 | 4_1:+76622446 | None:intergenic |
| TTTAATTGGTGGTTTGTAAT+GGG | 0.303409 | 4_1:-76622756 | Msa0573430:exon |
| GGGTGGGGTTAATTAATTAA+TGG | 0.316918 | 4_1:+76622894 | None:intergenic |
| TAGATATGAAATATTAGAAA+TGG | 0.344715 | 4_1:+76622491 | None:intergenic |
| ATATACCTTTCTTTCTCTCT+TGG | 0.345963 | 4_1:+76622445 | None:intergenic |
| CTTGGAGGACTTCGTCTCTT+CGG | 0.346467 | 4_1:-76622666 | Msa0573430:CDS |
| GAAAGTGTGAGGTCCAAATT+AGG | 0.360682 | 4_1:+76621259 | None:intergenic |
| CTTTAATTGGTGGTTTGTAA+TGG | 0.382037 | 4_1:-76622757 | Msa0573430:exon |
| TTGTGCTCTTCTTCTGTCCA+TGG | 0.384190 | 4_1:+76621930 | None:intergenic |
| GAACAAACGAATTAGTTTAG+AGG | 0.384852 | 4_1:+76622840 | None:intergenic |
| AATATTAAGTGACGCTAATT+GGG | 0.393873 | 4_1:+76621176 | None:intergenic |
| GAGCACAAAACATTCCTTGT+TGG | 0.416310 | 4_1:-76621915 | Msa0573430:CDS |
| GATGGAGTGAGATGTGGGGT+GGG | 0.435247 | 4_1:+76622878 | None:intergenic |
| AGATATGAAATATTAGAAAT+GGG | 0.436344 | 4_1:+76622492 | None:intergenic |
| TTCTTCTTGTACATGAGGTT+AGG | 0.437685 | 4_1:+76621105 | None:intergenic |
| TGTTCGCATTGTGGTAAGAT+AGG | 0.440998 | 4_1:-76622723 | Msa0573430:CDS |
| AATGAGGAAGATGGAGAGGA+TGG | 0.441387 | 4_1:+76622564 | None:intergenic |
| CATGGCTAGCGACTTGTGTA+GGG | 0.443009 | 4_1:+76621829 | None:intergenic |
| GCATGGCTAGCGACTTGTGT+AGG | 0.465972 | 4_1:+76621828 | None:intergenic |
| ATACCTTTCTTTCTCTCTTG+GGG | 0.468820 | 4_1:+76622447 | None:intergenic |
| CCAAGAAGGAATGAGCCAGC+AGG | 0.469903 | 4_1:+76621199 | None:intergenic |
| GCTAATTCAGTAGTAAAATT+GGG | 0.470189 | 4_1:-76621439 | Msa0573430:CDS |
| CACACACACACTTTAATTGG+TGG | 0.471799 | 4_1:-76622767 | Msa0573430:five_prime_UTR |
| CAAAATCAACCCTCCCCTGC+TGG | 0.476253 | 4_1:-76621214 | Msa0573430:CDS |
| GGATTAGAGAAGCTAGGAAA+AGG | 0.476740 | 4_1:-76621894 | Msa0573430:CDS |
| CTACTGAATTAGCATGCCCT+TGG | 0.478374 | 4_1:+76621449 | None:intergenic |
| TGCACATCCTTCACTACCCT+TGG | 0.478767 | 4_1:-76622684 | Msa0573430:CDS |
| AGAAGCTAGGAAAAGGAGAC+TGG | 0.482282 | 4_1:-76621887 | Msa0573430:CDS |
| CCTTTCTTTCTCTCTTGGGG+TGG | 0.484527 | 4_1:+76622450 | None:intergenic |
| TGGAGAGGATGGTGAGGGAA+AGG | 0.486578 | 4_1:+76622575 | None:intergenic |
| CAAGAAGGAATGAGCCAGCA+GGG | 0.487978 | 4_1:+76621200 | None:intergenic |
| TGCTTCTTCTTGTTTAAAGT+AGG | 0.502048 | 4_1:+76621357 | None:intergenic |
| GTAAGATAGGACATAATTGT+AGG | 0.502669 | 4_1:-76622710 | Msa0573430:CDS |
| ATCATTTCTTCTTGTACATG+AGG | 0.503740 | 4_1:+76621100 | None:intergenic |
| CCACCCCAAGAGAGAAAGAA+AGG | 0.504684 | 4_1:-76622450 | Msa0573430:intron |
| AAAATTGGGTCATAAATTTG+AGG | 0.507444 | 4_1:-76621425 | Msa0573430:CDS |
| TGTGTGTGTGAGAACGAGAA+TGG | 0.510837 | 4_1:+76622790 | None:intergenic |
| AGAGAATGAGGAAGATGGAG+AGG | 0.510998 | 4_1:+76622560 | None:intergenic |
| AAGGAATGAGCCAGCAGGGG+AGG | 0.519594 | 4_1:+76621204 | None:intergenic |
| AGGAGGAGGAAGATGATAGT+TGG | 0.520403 | 4_1:+76622640 | None:intergenic |
| GTACAAGAAGAAATGATCAA+TGG | 0.521355 | 4_1:-76621094 | Msa0573430:three_prime_UTR |
| GATGAAGAGAATGAGGAAGA+TGG | 0.523435 | 4_1:+76622555 | None:intergenic |
| GGTACTAGATGATGAGGAGG+AGG | 0.525979 | 4_1:+76622626 | None:intergenic |
| CTTGTTGGATTAGAGAAGCT+AGG | 0.528666 | 4_1:-76621900 | Msa0573430:CDS |
| TTAGAGGTATATATGATATG+AGG | 0.531181 | 4_1:+76622856 | None:intergenic |
| AACACCAACACAAAAGACCA+AGG | 0.532037 | 4_1:-76621466 | Msa0573430:CDS |
| TTGATTGATCAGGAGTTCCA+TGG | 0.532260 | 4_1:-76621947 | Msa0573430:intron |
| ATGAGGATGGAGTGAGATGT+GGG | 0.534721 | 4_1:+76622873 | None:intergenic |
| ACATCCTTCACTACCCTTGG+AGG | 0.544075 | 4_1:-76622681 | Msa0573430:CDS |
| TGACGCTAATTGGGCCAAGA+AGG | 0.545277 | 4_1:+76621185 | None:intergenic |
| ATGGAGTGAGATGTGGGGTG+GGG | 0.548858 | 4_1:+76622879 | None:intergenic |
| AGGAATGAGCCAGCAGGGGA+GGG | 0.549931 | 4_1:+76621205 | None:intergenic |
| GGAAGATGGAGAGGATGGTG+AGG | 0.553718 | 4_1:+76622569 | None:intergenic |
| TTAATTGGTGGTTTGTAATG+GGG | 0.554717 | 4_1:-76622755 | Msa0573430:exon |
| GATCAAGAAAAGCTTTAGCA+TGG | 0.562627 | 4_1:-76622601 | Msa0573430:CDS |
| GTGTGTGTGAGAACGAGAAT+GGG | 0.562764 | 4_1:+76622791 | None:intergenic |
| GAAGATGGAGAGGATGGTGA+GGG | 0.564987 | 4_1:+76622570 | None:intergenic |
| CATGGTACTAGATGATGAGG+AGG | 0.567197 | 4_1:+76622623 | None:intergenic |
| ACGTTCAAGTCTCTTTGACT+TGG | 0.572684 | 4_1:-76621763 | Msa0573430:intron |
| CGAAGAGACGAAGTCCTCCA+AGG | 0.582973 | 4_1:+76622667 | None:intergenic |
| GGATGGAGTGAGATGTGGGG+TGG | 0.583616 | 4_1:+76622877 | None:intergenic |
| AGGTATATATGATATGAGGA+TGG | 0.592804 | 4_1:+76622860 | None:intergenic |
| TGATGTTGATGAAGAGAATG+AGG | 0.596418 | 4_1:+76622548 | None:intergenic |
| TATGAGGATGGAGTGAGATG+TGG | 0.597667 | 4_1:+76622872 | None:intergenic |
| CTAGCTTCTCTAATCCAACA+AGG | 0.600496 | 4_1:+76621901 | None:intergenic |
| GATCATGGTACTAGATGATG+AGG | 0.600688 | 4_1:+76622620 | None:intergenic |
| AGAAGAAAGTGTTCGCATTG+TGG | 0.603130 | 4_1:-76622732 | Msa0573430:CDS |
| AAGTCCTCCAAGGGTAGTGA+AGG | 0.604978 | 4_1:+76622677 | None:intergenic |
| TTGTTTAAAGTAGGACAAAG+TGG | 0.607562 | 4_1:+76621366 | None:intergenic |
| TGTGAAGTTGAGATGAATGA+TGG | 0.607811 | 4_1:-76621391 | Msa0573430:CDS |
| AAGAAGGAATGAGCCAGCAG+GGG | 0.613479 | 4_1:+76621201 | None:intergenic |
| TGGAGGACTTCGTCTCTTCG+GGG | 0.623972 | 4_1:-76622664 | Msa0573430:CDS |
| ACACCAACACAAAAGACCAA+GGG | 0.642158 | 4_1:-76621465 | Msa0573430:CDS |
| GAAGAGACGAAGTCCTCCAA+GGG | 0.651358 | 4_1:+76622668 | None:intergenic |
| ATGGCTAGCGACTTGTGTAG+GGG | 0.659705 | 4_1:+76621830 | None:intergenic |
| CTAGGAAAAGGAGACTGGAG+AGG | 0.661686 | 4_1:-76621882 | Msa0573430:CDS |
| TGAGGATGGAGTGAGATGTG+GGG | 0.681667 | 4_1:+76622874 | None:intergenic |
| GGGATGCAACTGAAAGTGTG+AGG | 0.693635 | 4_1:+76621248 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATAATTTTCATCAATAT+TGG | + | chr4_1:76621453-76621472 | None:intergenic | 10.0% |
| !! | TAAATAAAAAAAACAAATGA+AGG | + | chr4_1:76621765-76621784 | None:intergenic | 10.0% |
| !!! | AACTAAATTATTTTTATTTG+TGG | + | chr4_1:76622358-76622377 | None:intergenic | 10.0% |
| !! | AAATAAAAAAAAGTTAAAAG+AGG | + | chr4_1:76622398-76622417 | None:intergenic | 10.0% |
| !!! | GTAAGTTATTTTTATTTTTA+TGG | - | chr4_1:76622428-76622447 | Msa0573430:intron | 10.0% |
| !!! | ATAATAATTTTCATCAATAT+TGG | + | chr4_1:76621453-76621472 | None:intergenic | 10.0% |
| !! | TAAATAAAAAAAACAAATGA+AGG | + | chr4_1:76621765-76621784 | None:intergenic | 10.0% |
| !!! | AACTAAATTATTTTTATTTG+TGG | + | chr4_1:76622358-76622377 | None:intergenic | 10.0% |
| !! | AAATAAAAAAAAGTTAAAAG+AGG | + | chr4_1:76622398-76622417 | None:intergenic | 10.0% |
| !!! | GTAAGTTATTTTTATTTTTA+TGG | - | chr4_1:76622428-76622447 | Msa0573430:intron | 10.0% |
| !! | GTTAATTAATTAATGGAAAA+TGG | + | chr4_1:76621073-76621092 | None:intergenic | 15.0% |
| !! | AGATATGAAATATTAGAAAT+GGG | + | chr4_1:76621482-76621501 | None:intergenic | 15.0% |
| !! | TAGATATGAAATATTAGAAA+TGG | + | chr4_1:76621483-76621502 | None:intergenic | 15.0% |
| !! | TATATTTATACATATGTTAG+CGG | - | chr4_1:76621544-76621563 | Msa0573430:intron | 15.0% |
| !!! | TATAAAGGAATATAAGATTT+TGG | + | chr4_1:76621850-76621869 | None:intergenic | 15.0% |
| !! | TCTTATATTCCTTTATATAT+TGG | - | chr4_1:76621853-76621872 | Msa0573430:CDS | 15.0% |
| !!! | TTATTTTTATTTGTGGTTAT+GGG | + | chr4_1:76622351-76622370 | None:intergenic | 15.0% |
| !!! | ATTATTTTTATTTGTGGTTA+TGG | + | chr4_1:76622352-76622371 | None:intergenic | 15.0% |
| !! | ATATTATTAATTCAATGACA+AGG | + | chr4_1:76622456-76622475 | None:intergenic | 15.0% |
| !! | GTTAATTAATTAATGGAAAA+TGG | + | chr4_1:76621073-76621092 | None:intergenic | 15.0% |
| !! | AGATATGAAATATTAGAAAT+GGG | + | chr4_1:76621482-76621501 | None:intergenic | 15.0% |
| !! | TAGATATGAAATATTAGAAA+TGG | + | chr4_1:76621483-76621502 | None:intergenic | 15.0% |
| !! | TATATTTATACATATGTTAG+CGG | - | chr4_1:76621544-76621563 | Msa0573430:intron | 15.0% |
| !!! | TATAAAGGAATATAAGATTT+TGG | + | chr4_1:76621850-76621869 | None:intergenic | 15.0% |
| !! | TCTTATATTCCTTTATATAT+TGG | - | chr4_1:76621853-76621872 | Msa0573430:CDS | 15.0% |
| !!! | TTATTTTTATTTGTGGTTAT+GGG | + | chr4_1:76622351-76622370 | None:intergenic | 15.0% |
| !!! | ATTATTTTTATTTGTGGTTA+TGG | + | chr4_1:76622352-76622371 | None:intergenic | 15.0% |
| !! | ATATTATTAATTCAATGACA+AGG | + | chr4_1:76622456-76622475 | None:intergenic | 15.0% |
| !!! | TATCTATCAGATTGTTTTAT+AGG | - | chr4_1:76621497-76621516 | Msa0573430:intron | 20.0% |
| !! | TCTTTCAATTCTATTCTTAT+TGG | + | chr4_1:76621816-76621835 | None:intergenic | 20.0% |
| !! | TATTCCTTTATATATTGGTA+TGG | - | chr4_1:76621858-76621877 | Msa0573430:CDS | 20.0% |
| !! | TCAAAAATACTTTCTTAGAT+TGG | - | chr4_1:76622166-76622185 | Msa0573430:intron | 20.0% |
| !! | AATATAAAGTAAGTCTTACA+TGG | - | chr4_1:76622318-76622337 | Msa0573430:intron | 20.0% |
| !! | ATAATTACTCTACAGATAAT+TGG | - | chr4_1:76622659-76622678 | Msa0573430:CDS | 20.0% |
| !!! | TATCTATCAGATTGTTTTAT+AGG | - | chr4_1:76621497-76621516 | Msa0573430:intron | 20.0% |
| !! | TCTTTCAATTCTATTCTTAT+TGG | + | chr4_1:76621816-76621835 | None:intergenic | 20.0% |
| !! | TATTCCTTTATATATTGGTA+TGG | - | chr4_1:76621858-76621877 | Msa0573430:CDS | 20.0% |
| !! | TCAAAAATACTTTCTTAGAT+TGG | - | chr4_1:76622166-76622185 | Msa0573430:intron | 20.0% |
| !! | AATATAAAGTAAGTCTTACA+TGG | - | chr4_1:76622318-76622337 | Msa0573430:intron | 20.0% |
| !! | ATAATTACTCTACAGATAAT+TGG | - | chr4_1:76622659-76622678 | Msa0573430:CDS | 20.0% |
| !! | TTAGAGGTATATATGATATG+AGG | + | chr4_1:76621118-76621137 | None:intergenic | 25.0% |
| !! | TTTAATTGGTGGTTTGTAAT+GGG | - | chr4_1:76621215-76621234 | Msa0573430:CDS | 25.0% |
| ! | ACATCCATACCAATATATAA+AGG | + | chr4_1:76621865-76621884 | None:intergenic | 25.0% |
| ! | TATACTTCTAATTTGAGCTA+AGG | - | chr4_1:76621922-76621941 | Msa0573430:CDS | 25.0% |
| ! | ATACTTCTAATTTGAGCTAA+GGG | - | chr4_1:76621923-76621942 | Msa0573430:CDS | 25.0% |
| ! | ATGATGAATGAGAAAATACT+TGG | - | chr4_1:76621970-76621989 | Msa0573430:intron | 25.0% |
| ! | TGATGAATGAGAAAATACTT+GGG | - | chr4_1:76621971-76621990 | Msa0573430:intron | 25.0% |
| !! | TATATACTGATTGATTGATC+AGG | - | chr4_1:76622014-76622033 | Msa0573430:intron | 25.0% |
| !!! | TAAGAAAGTATTTTTGAGCA+TGG | + | chr4_1:76622163-76622182 | None:intergenic | 25.0% |
| ! | AAGACTTACTTTATATTCAG+TGG | + | chr4_1:76622315-76622334 | None:intergenic | 25.0% |
| ! | TGCTAATTCAGTAGTAAAAT+TGG | - | chr4_1:76622531-76622550 | Msa0573430:CDS | 25.0% |
| ! | GCTAATTCAGTAGTAAAATT+GGG | - | chr4_1:76622532-76622551 | Msa0573430:CDS | 25.0% |
| ! | AAAATTGGGTCATAAATTTG+AGG | - | chr4_1:76622546-76622565 | Msa0573430:CDS | 25.0% |
| !!! | ATTTTCTTGCTTTTCTGATT+TGG | + | chr4_1:76622641-76622660 | None:intergenic | 25.0% |
| ! | AATATTAAGTGACGCTAATT+GGG | + | chr4_1:76622798-76622817 | None:intergenic | 25.0% |
| ! | AAATATTAAGTGACGCTAAT+TGG | + | chr4_1:76622799-76622818 | None:intergenic | 25.0% |
| !! | TTAGAGGTATATATGATATG+AGG | + | chr4_1:76621118-76621137 | None:intergenic | 25.0% |
| !! | TTTAATTGGTGGTTTGTAAT+GGG | - | chr4_1:76621215-76621234 | Msa0573430:CDS | 25.0% |
| ! | ACATCCATACCAATATATAA+AGG | + | chr4_1:76621865-76621884 | None:intergenic | 25.0% |
| ! | TATACTTCTAATTTGAGCTA+AGG | - | chr4_1:76621922-76621941 | Msa0573430:CDS | 25.0% |
| ! | ATACTTCTAATTTGAGCTAA+GGG | - | chr4_1:76621923-76621942 | Msa0573430:CDS | 25.0% |
| ! | ATGATGAATGAGAAAATACT+TGG | - | chr4_1:76621970-76621989 | Msa0573430:intron | 25.0% |
| ! | TGATGAATGAGAAAATACTT+GGG | - | chr4_1:76621971-76621990 | Msa0573430:intron | 25.0% |
| !! | TATATACTGATTGATTGATC+AGG | - | chr4_1:76622014-76622033 | Msa0573430:intron | 25.0% |
| !!! | TAAGAAAGTATTTTTGAGCA+TGG | + | chr4_1:76622163-76622182 | None:intergenic | 25.0% |
| ! | AAGACTTACTTTATATTCAG+TGG | + | chr4_1:76622315-76622334 | None:intergenic | 25.0% |
| ! | TGCTAATTCAGTAGTAAAAT+TGG | - | chr4_1:76622531-76622550 | Msa0573430:CDS | 25.0% |
| ! | GCTAATTCAGTAGTAAAATT+GGG | - | chr4_1:76622532-76622551 | Msa0573430:CDS | 25.0% |
| ! | AAAATTGGGTCATAAATTTG+AGG | - | chr4_1:76622546-76622565 | Msa0573430:CDS | 25.0% |
| !!! | ATTTTCTTGCTTTTCTGATT+TGG | + | chr4_1:76622641-76622660 | None:intergenic | 25.0% |
| ! | AATATTAAGTGACGCTAATT+GGG | + | chr4_1:76622798-76622817 | None:intergenic | 25.0% |
| ! | AAATATTAAGTGACGCTAAT+TGG | + | chr4_1:76622799-76622818 | None:intergenic | 25.0% |
| AGGTATATATGATATGAGGA+TGG | + | chr4_1:76621114-76621133 | None:intergenic | 30.0% | |
| ! | GAACAAACGAATTAGTTTAG+AGG | + | chr4_1:76621134-76621153 | None:intergenic | 30.0% |
| ! | CTTTAATTGGTGGTTTGTAA+TGG | - | chr4_1:76621214-76621233 | Msa0573430:CDS | 30.0% |
| ! | TTAATTGGTGGTTTGTAATG+GGG | - | chr4_1:76621216-76621235 | Msa0573430:CDS | 30.0% |
| GTAAGATAGGACATAATTGT+AGG | - | chr4_1:76621261-76621280 | Msa0573430:CDS | 30.0% | |
| TATACCTTTCTTTCTCTCTT+GGG | + | chr4_1:76621528-76621547 | None:intergenic | 30.0% | |
| ATATACCTTTCTTTCTCTCT+TGG | + | chr4_1:76621529-76621548 | None:intergenic | 30.0% | |
| AATATGATATATTTGGCTGC+AGG | - | chr4_1:76622471-76622490 | Msa0573430:CDS | 30.0% | |
| ! | TTGTTTAAAGTAGGACAAAG+TGG | + | chr4_1:76622608-76622627 | None:intergenic | 30.0% |
| ! | TGCTTCTTCTTGTTTAAAGT+AGG | + | chr4_1:76622617-76622636 | None:intergenic | 30.0% |
| ! | TTGATTTTGTTCAAGCTTAG+GGG | + | chr4_1:76622746-76622765 | None:intergenic | 30.0% |
| !! | GTTGATTTTGTTCAAGCTTA+GGG | + | chr4_1:76622747-76622766 | None:intergenic | 30.0% |
| ATCATTTCTTCTTGTACATG+AGG | + | chr4_1:76622874-76622893 | None:intergenic | 30.0% | |
| GTACAAGAAGAAATGATCAA+TGG | - | chr4_1:76622877-76622896 | Msa0573430:five_prime_UTR | 30.0% | |
| AGGTATATATGATATGAGGA+TGG | + | chr4_1:76621114-76621133 | None:intergenic | 30.0% | |
| ! | GAACAAACGAATTAGTTTAG+AGG | + | chr4_1:76621134-76621153 | None:intergenic | 30.0% |
| ! | CTTTAATTGGTGGTTTGTAA+TGG | - | chr4_1:76621214-76621233 | Msa0573430:CDS | 30.0% |
| ! | TTAATTGGTGGTTTGTAATG+GGG | - | chr4_1:76621216-76621235 | Msa0573430:CDS | 30.0% |
| GTAAGATAGGACATAATTGT+AGG | - | chr4_1:76621261-76621280 | Msa0573430:CDS | 30.0% | |
| TATACCTTTCTTTCTCTCTT+GGG | + | chr4_1:76621528-76621547 | None:intergenic | 30.0% | |
| ATATACCTTTCTTTCTCTCT+TGG | + | chr4_1:76621529-76621548 | None:intergenic | 30.0% | |
| AATATGATATATTTGGCTGC+AGG | - | chr4_1:76622471-76622490 | Msa0573430:CDS | 30.0% | |
| ! | TTGTTTAAAGTAGGACAAAG+TGG | + | chr4_1:76622608-76622627 | None:intergenic | 30.0% |
| ! | TGCTTCTTCTTGTTTAAAGT+AGG | + | chr4_1:76622617-76622636 | None:intergenic | 30.0% |
| ! | TTGATTTTGTTCAAGCTTAG+GGG | + | chr4_1:76622746-76622765 | None:intergenic | 30.0% |
| !! | GTTGATTTTGTTCAAGCTTA+GGG | + | chr4_1:76622747-76622766 | None:intergenic | 30.0% |
| ATCATTTCTTCTTGTACATG+AGG | + | chr4_1:76622874-76622893 | None:intergenic | 30.0% | |
| GTACAAGAAGAAATGATCAA+TGG | - | chr4_1:76622877-76622896 | Msa0573430:five_prime_UTR | 30.0% | |
| GGGTGGGGTTAATTAATTAA+TGG | + | chr4_1:76621080-76621099 | None:intergenic | 35.0% | |
| ACACACACACACACTTTAAT+TGG | - | chr4_1:76621201-76621220 | Msa0573430:CDS | 35.0% | |
| ! | GCTAAAGCTTTTCTTGATCA+TGG | + | chr4_1:76621369-76621388 | None:intergenic | 35.0% |
| ! | GATCAAGAAAAGCTTTAGCA+TGG | - | chr4_1:76621370-76621389 | Msa0573430:CDS | 35.0% |
| ! | TGATGTTGATGAAGAGAATG+AGG | + | chr4_1:76621426-76621445 | None:intergenic | 35.0% |
| ATACCTTTCTTTCTCTCTTG+GGG | + | chr4_1:76621527-76621546 | None:intergenic | 35.0% | |
| TACATATGTTAGCGGAAAGA+TGG | - | chr4_1:76621552-76621571 | Msa0573430:intron | 35.0% | |
| AAACAAATGAAGGAAGCTGT+TGG | + | chr4_1:76621755-76621774 | None:intergenic | 35.0% | |
| ATTTGAGCTAAGGGAGTTAA+TGG | - | chr4_1:76621932-76621951 | Msa0573430:CDS | 35.0% | |
| TGTGAAGTTGAGATGAATGA+TGG | - | chr4_1:76622580-76622599 | Msa0573430:CDS | 35.0% | |
| !! | GGTTGATTTTGTTCAAGCTT+AGG | + | chr4_1:76622748-76622767 | None:intergenic | 35.0% |
| TTCTTCTTGTACATGAGGTT+AGG | + | chr4_1:76622869-76622888 | None:intergenic | 35.0% | |
| ! | TCAATGGAACACGTTTTTCT+TGG | - | chr4_1:76622893-76622912 | Msa0573430:five_prime_UTR | 35.0% |
| GGGTGGGGTTAATTAATTAA+TGG | + | chr4_1:76621080-76621099 | None:intergenic | 35.0% | |
| ACACACACACACACTTTAAT+TGG | - | chr4_1:76621201-76621220 | Msa0573430:CDS | 35.0% | |
| ! | GCTAAAGCTTTTCTTGATCA+TGG | + | chr4_1:76621369-76621388 | None:intergenic | 35.0% |
| ! | GATCAAGAAAAGCTTTAGCA+TGG | - | chr4_1:76621370-76621389 | Msa0573430:CDS | 35.0% |
| ! | TGATGTTGATGAAGAGAATG+AGG | + | chr4_1:76621426-76621445 | None:intergenic | 35.0% |
| ATACCTTTCTTTCTCTCTTG+GGG | + | chr4_1:76621527-76621546 | None:intergenic | 35.0% | |
| TACATATGTTAGCGGAAAGA+TGG | - | chr4_1:76621552-76621571 | Msa0573430:intron | 35.0% | |
| AAACAAATGAAGGAAGCTGT+TGG | + | chr4_1:76621755-76621774 | None:intergenic | 35.0% | |
| ATTTGAGCTAAGGGAGTTAA+TGG | - | chr4_1:76621932-76621951 | Msa0573430:CDS | 35.0% | |
| TGTGAAGTTGAGATGAATGA+TGG | - | chr4_1:76622580-76622599 | Msa0573430:CDS | 35.0% | |
| !! | GGTTGATTTTGTTCAAGCTT+AGG | + | chr4_1:76622748-76622767 | None:intergenic | 35.0% |
| TTCTTCTTGTACATGAGGTT+AGG | + | chr4_1:76622869-76622888 | None:intergenic | 35.0% | |
| ! | TCAATGGAACACGTTTTTCT+TGG | - | chr4_1:76622893-76622912 | Msa0573430:five_prime_UTR | 35.0% |
| CACACACACACTTTAATTGG+TGG | - | chr4_1:76621204-76621223 | Msa0573430:CDS | 40.0% | |
| !! | AGAAGAAAGTGTTCGCATTG+TGG | - | chr4_1:76621239-76621258 | Msa0573430:CDS | 40.0% |
| TGTTCGCATTGTGGTAAGAT+AGG | - | chr4_1:76621248-76621267 | Msa0573430:CDS | 40.0% | |
| GATCATGGTACTAGATGATG+AGG | + | chr4_1:76621354-76621373 | None:intergenic | 40.0% | |
| GATGAAGAGAATGAGGAAGA+TGG | + | chr4_1:76621419-76621438 | None:intergenic | 40.0% | |
| TTGATTGATCAGGAGTTCCA+TGG | - | chr4_1:76622024-76622043 | Msa0573430:intron | 40.0% | |
| GAGCACAAAACATTCCTTGT+TGG | - | chr4_1:76622056-76622075 | Msa0573430:intron | 40.0% | |
| CTAGCTTCTCTAATCCAACA+AGG | + | chr4_1:76622073-76622092 | None:intergenic | 40.0% | |
| ! | CTTGTTGGATTAGAGAAGCT+AGG | - | chr4_1:76622071-76622090 | Msa0573430:intron | 40.0% |
| GGATTAGAGAAGCTAGGAAA+AGG | - | chr4_1:76622077-76622096 | Msa0573430:intron | 40.0% | |
| ACGTTCAAGTCTCTTTGACT+TGG | - | chr4_1:76622208-76622227 | Msa0573430:intron | 40.0% | |
| TATTTGTGGTTATGGGCTTG+TGG | + | chr4_1:76622344-76622363 | None:intergenic | 40.0% | |
| TGATATATTTGGCTGCAGGT+TGG | - | chr4_1:76622475-76622494 | Msa0573430:CDS | 40.0% | |
| GATATATTTGGCTGCAGGTT+GGG | - | chr4_1:76622476-76622495 | Msa0573430:CDS | 40.0% | |
| AACACCAACACAAAAGACCA+AGG | - | chr4_1:76622505-76622524 | Msa0573430:CDS | 40.0% | |
| ACACCAACACAAAAGACCAA+GGG | - | chr4_1:76622506-76622525 | Msa0573430:CDS | 40.0% | |
| ! | GAAAGTGTGAGGTCCAAATT+AGG | + | chr4_1:76622715-76622734 | None:intergenic | 40.0% |
| CACACACACACTTTAATTGG+TGG | - | chr4_1:76621204-76621223 | Msa0573430:CDS | 40.0% | |
| !! | AGAAGAAAGTGTTCGCATTG+TGG | - | chr4_1:76621239-76621258 | Msa0573430:CDS | 40.0% |
| TGTTCGCATTGTGGTAAGAT+AGG | - | chr4_1:76621248-76621267 | Msa0573430:CDS | 40.0% | |
| GATCATGGTACTAGATGATG+AGG | + | chr4_1:76621354-76621373 | None:intergenic | 40.0% | |
| GATGAAGAGAATGAGGAAGA+TGG | + | chr4_1:76621419-76621438 | None:intergenic | 40.0% | |
| TTGATTGATCAGGAGTTCCA+TGG | - | chr4_1:76622024-76622043 | Msa0573430:intron | 40.0% | |
| GAGCACAAAACATTCCTTGT+TGG | - | chr4_1:76622056-76622075 | Msa0573430:intron | 40.0% | |
| CTAGCTTCTCTAATCCAACA+AGG | + | chr4_1:76622073-76622092 | None:intergenic | 40.0% | |
| ! | CTTGTTGGATTAGAGAAGCT+AGG | - | chr4_1:76622071-76622090 | Msa0573430:intron | 40.0% |
| GGATTAGAGAAGCTAGGAAA+AGG | - | chr4_1:76622077-76622096 | Msa0573430:intron | 40.0% | |
| ACGTTCAAGTCTCTTTGACT+TGG | - | chr4_1:76622208-76622227 | Msa0573430:intron | 40.0% | |
| TATTTGTGGTTATGGGCTTG+TGG | + | chr4_1:76622344-76622363 | None:intergenic | 40.0% | |
| TGATATATTTGGCTGCAGGT+TGG | - | chr4_1:76622475-76622494 | Msa0573430:CDS | 40.0% | |
| GATATATTTGGCTGCAGGTT+GGG | - | chr4_1:76622476-76622495 | Msa0573430:CDS | 40.0% | |
| AACACCAACACAAAAGACCA+AGG | - | chr4_1:76622505-76622524 | Msa0573430:CDS | 40.0% | |
| ACACCAACACAAAAGACCAA+GGG | - | chr4_1:76622506-76622525 | Msa0573430:CDS | 40.0% | |
| ! | GAAAGTGTGAGGTCCAAATT+AGG | + | chr4_1:76622715-76622734 | None:intergenic | 40.0% |
| ATGAGGATGGAGTGAGATGT+GGG | + | chr4_1:76621101-76621120 | None:intergenic | 45.0% | |
| TATGAGGATGGAGTGAGATG+TGG | + | chr4_1:76621102-76621121 | None:intergenic | 45.0% | |
| GTGTGTGTGAGAACGAGAAT+GGG | + | chr4_1:76621183-76621202 | None:intergenic | 45.0% | |
| TGTGTGTGTGAGAACGAGAA+TGG | + | chr4_1:76621184-76621203 | None:intergenic | 45.0% | |
| AGGAGGAGGAAGATGATAGT+TGG | + | chr4_1:76621334-76621353 | None:intergenic | 45.0% | |
| CATGGTACTAGATGATGAGG+AGG | + | chr4_1:76621351-76621370 | None:intergenic | 45.0% | |
| AATGAGGAAGATGGAGAGGA+TGG | + | chr4_1:76621410-76621429 | None:intergenic | 45.0% | |
| AGAGAATGAGGAAGATGGAG+AGG | + | chr4_1:76621414-76621433 | None:intergenic | 45.0% | |
| TTGTGCTCTTCTTCTGTCCA+TGG | + | chr4_1:76622044-76622063 | None:intergenic | 45.0% | |
| AGAAGCTAGGAAAAGGAGAC+TGG | - | chr4_1:76622084-76622103 | Msa0573430:intron | 45.0% | |
| !! | ATGCCCTTGGTCTTTTGTGT+TGG | + | chr4_1:76622512-76622531 | None:intergenic | 45.0% |
| CTACTGAATTAGCATGCCCT+TGG | + | chr4_1:76622525-76622544 | None:intergenic | 45.0% | |
| TTGTGCAGCAGTGCCTAATT+TGG | - | chr4_1:76622699-76622718 | Msa0573430:CDS | 45.0% | |
| ATGAGGATGGAGTGAGATGT+GGG | + | chr4_1:76621101-76621120 | None:intergenic | 45.0% | |
| TATGAGGATGGAGTGAGATG+TGG | + | chr4_1:76621102-76621121 | None:intergenic | 45.0% | |
| GTGTGTGTGAGAACGAGAAT+GGG | + | chr4_1:76621183-76621202 | None:intergenic | 45.0% | |
| TGTGTGTGTGAGAACGAGAA+TGG | + | chr4_1:76621184-76621203 | None:intergenic | 45.0% | |
| AGGAGGAGGAAGATGATAGT+TGG | + | chr4_1:76621334-76621353 | None:intergenic | 45.0% | |
| CATGGTACTAGATGATGAGG+AGG | + | chr4_1:76621351-76621370 | None:intergenic | 45.0% | |
| AATGAGGAAGATGGAGAGGA+TGG | + | chr4_1:76621410-76621429 | None:intergenic | 45.0% | |
| AGAGAATGAGGAAGATGGAG+AGG | + | chr4_1:76621414-76621433 | None:intergenic | 45.0% | |
| TTGTGCTCTTCTTCTGTCCA+TGG | + | chr4_1:76622044-76622063 | None:intergenic | 45.0% | |
| AGAAGCTAGGAAAAGGAGAC+TGG | - | chr4_1:76622084-76622103 | Msa0573430:intron | 45.0% | |
| !! | ATGCCCTTGGTCTTTTGTGT+TGG | + | chr4_1:76622512-76622531 | None:intergenic | 45.0% |
| CTACTGAATTAGCATGCCCT+TGG | + | chr4_1:76622525-76622544 | None:intergenic | 45.0% | |
| TTGTGCAGCAGTGCCTAATT+TGG | - | chr4_1:76622699-76622718 | Msa0573430:CDS | 45.0% | |
| !! | AATTAATAATATGATATATT+TGG | - | chr4_1:76622464-76622483 | Msa0573430:CDS | 5.0% |
| !! | AATTAATAATATGATATATT+TGG | - | chr4_1:76622464-76622483 | Msa0573430:CDS | 5.0% |
| TGAGGATGGAGTGAGATGTG+GGG | + | chr4_1:76621100-76621119 | None:intergenic | 50.0% | |
| TGCACATCCTTCACTACCCT+TGG | - | chr4_1:76621287-76621306 | Msa0573430:CDS | 50.0% | |
| ACATCCTTCACTACCCTTGG+AGG | - | chr4_1:76621290-76621309 | Msa0573430:CDS | 50.0% | |
| AAGTCCTCCAAGGGTAGTGA+AGG | + | chr4_1:76621297-76621316 | None:intergenic | 50.0% | |
| GAAGAGACGAAGTCCTCCAA+GGG | + | chr4_1:76621306-76621325 | None:intergenic | 50.0% | |
| CTTGGAGGACTTCGTCTCTT+CGG | - | chr4_1:76621305-76621324 | Msa0573430:CDS | 50.0% | |
| TTGGAGGACTTCGTCTCTTC+GGG | - | chr4_1:76621306-76621325 | Msa0573430:CDS | 50.0% | |
| GGTACTAGATGATGAGGAGG+AGG | + | chr4_1:76621348-76621367 | None:intergenic | 50.0% | |
| GAAGATGGAGAGGATGGTGA+GGG | + | chr4_1:76621404-76621423 | None:intergenic | 50.0% | |
| CCTTTCTTTCTCTCTTGGGG+TGG | + | chr4_1:76621524-76621543 | None:intergenic | 50.0% | |
| CCACCCCAAGAGAGAAAGAA+AGG | - | chr4_1:76621521-76621540 | Msa0573430:intron | 50.0% | |
| CTAGGAAAAGGAGACTGGAG+AGG | - | chr4_1:76622089-76622108 | Msa0573430:intron | 50.0% | |
| ATGGCTAGCGACTTGTGTAG+GGG | + | chr4_1:76622144-76622163 | None:intergenic | 50.0% | |
| CATGGCTAGCGACTTGTGTA+GGG | + | chr4_1:76622145-76622164 | None:intergenic | 50.0% | |
| ! | GGGATGCAACTGAAAGTGTG+AGG | + | chr4_1:76622726-76622745 | None:intergenic | 50.0% |
| AAGAAGGAATGAGCCAGCAG+GGG | + | chr4_1:76622773-76622792 | None:intergenic | 50.0% | |
| CAAGAAGGAATGAGCCAGCA+GGG | + | chr4_1:76622774-76622793 | None:intergenic | 50.0% | |
| TGACGCTAATTGGGCCAAGA+AGG | + | chr4_1:76622789-76622808 | None:intergenic | 50.0% | |
| TGAGGATGGAGTGAGATGTG+GGG | + | chr4_1:76621100-76621119 | None:intergenic | 50.0% | |
| TGCACATCCTTCACTACCCT+TGG | - | chr4_1:76621287-76621306 | Msa0573430:CDS | 50.0% | |
| ACATCCTTCACTACCCTTGG+AGG | - | chr4_1:76621290-76621309 | Msa0573430:CDS | 50.0% | |
| AAGTCCTCCAAGGGTAGTGA+AGG | + | chr4_1:76621297-76621316 | None:intergenic | 50.0% | |
| GAAGAGACGAAGTCCTCCAA+GGG | + | chr4_1:76621306-76621325 | None:intergenic | 50.0% | |
| CTTGGAGGACTTCGTCTCTT+CGG | - | chr4_1:76621305-76621324 | Msa0573430:CDS | 50.0% | |
| TTGGAGGACTTCGTCTCTTC+GGG | - | chr4_1:76621306-76621325 | Msa0573430:CDS | 50.0% | |
| GGTACTAGATGATGAGGAGG+AGG | + | chr4_1:76621348-76621367 | None:intergenic | 50.0% | |
| GAAGATGGAGAGGATGGTGA+GGG | + | chr4_1:76621404-76621423 | None:intergenic | 50.0% | |
| CCTTTCTTTCTCTCTTGGGG+TGG | + | chr4_1:76621524-76621543 | None:intergenic | 50.0% | |
| CCACCCCAAGAGAGAAAGAA+AGG | - | chr4_1:76621521-76621540 | Msa0573430:intron | 50.0% | |
| CTAGGAAAAGGAGACTGGAG+AGG | - | chr4_1:76622089-76622108 | Msa0573430:intron | 50.0% | |
| ATGGCTAGCGACTTGTGTAG+GGG | + | chr4_1:76622144-76622163 | None:intergenic | 50.0% | |
| CATGGCTAGCGACTTGTGTA+GGG | + | chr4_1:76622145-76622164 | None:intergenic | 50.0% | |
| ! | GGGATGCAACTGAAAGTGTG+AGG | + | chr4_1:76622726-76622745 | None:intergenic | 50.0% |
| AAGAAGGAATGAGCCAGCAG+GGG | + | chr4_1:76622773-76622792 | None:intergenic | 50.0% | |
| CAAGAAGGAATGAGCCAGCA+GGG | + | chr4_1:76622774-76622793 | None:intergenic | 50.0% | |
| TGACGCTAATTGGGCCAAGA+AGG | + | chr4_1:76622789-76622808 | None:intergenic | 50.0% | |
| ATGGAGTGAGATGTGGGGTG+GGG | + | chr4_1:76621095-76621114 | None:intergenic | 55.0% | |
| GATGGAGTGAGATGTGGGGT+GGG | + | chr4_1:76621096-76621115 | None:intergenic | 55.0% | |
| CGAAGAGACGAAGTCCTCCA+AGG | + | chr4_1:76621307-76621326 | None:intergenic | 55.0% | |
| TGGAGGACTTCGTCTCTTCG+GGG | - | chr4_1:76621307-76621326 | Msa0573430:CDS | 55.0% | |
| TGGAGAGGATGGTGAGGGAA+AGG | + | chr4_1:76621399-76621418 | None:intergenic | 55.0% | |
| GGAAGATGGAGAGGATGGTG+AGG | + | chr4_1:76621405-76621424 | None:intergenic | 55.0% | |
| GCATGGCTAGCGACTTGTGT+AGG | + | chr4_1:76622146-76622165 | None:intergenic | 55.0% | |
| CAAAATCAACCCTCCCCTGC+TGG | - | chr4_1:76622757-76622776 | Msa0573430:exon | 55.0% | |
| CCAAGAAGGAATGAGCCAGC+AGG | + | chr4_1:76622775-76622794 | None:intergenic | 55.0% | |
| !! | CCTGCTGGCTCATTCCTTCT+TGG | - | chr4_1:76622772-76622791 | Msa0573430:five_prime_UTR | 55.0% |
| ATGGAGTGAGATGTGGGGTG+GGG | + | chr4_1:76621095-76621114 | None:intergenic | 55.0% | |
| GATGGAGTGAGATGTGGGGT+GGG | + | chr4_1:76621096-76621115 | None:intergenic | 55.0% | |
| CGAAGAGACGAAGTCCTCCA+AGG | + | chr4_1:76621307-76621326 | None:intergenic | 55.0% | |
| TGGAGGACTTCGTCTCTTCG+GGG | - | chr4_1:76621307-76621326 | Msa0573430:CDS | 55.0% | |
| TGGAGAGGATGGTGAGGGAA+AGG | + | chr4_1:76621399-76621418 | None:intergenic | 55.0% | |
| GGAAGATGGAGAGGATGGTG+AGG | + | chr4_1:76621405-76621424 | None:intergenic | 55.0% | |
| GCATGGCTAGCGACTTGTGT+AGG | + | chr4_1:76622146-76622165 | None:intergenic | 55.0% | |
| CAAAATCAACCCTCCCCTGC+TGG | - | chr4_1:76622757-76622776 | Msa0573430:exon | 55.0% | |
| CCAAGAAGGAATGAGCCAGC+AGG | + | chr4_1:76622775-76622794 | None:intergenic | 55.0% | |
| !! | CCTGCTGGCTCATTCCTTCT+TGG | - | chr4_1:76622772-76622791 | Msa0573430:five_prime_UTR | 55.0% |
| GGATGGAGTGAGATGTGGGG+TGG | + | chr4_1:76621097-76621116 | None:intergenic | 60.0% | |
| AGGAATGAGCCAGCAGGGGA+GGG | + | chr4_1:76622769-76622788 | None:intergenic | 60.0% | |
| AAGGAATGAGCCAGCAGGGG+AGG | + | chr4_1:76622770-76622789 | None:intergenic | 60.0% | |
| GGATGGAGTGAGATGTGGGG+TGG | + | chr4_1:76621097-76621116 | None:intergenic | 60.0% | |
| AGGAATGAGCCAGCAGGGGA+GGG | + | chr4_1:76622769-76622788 | None:intergenic | 60.0% | |
| AAGGAATGAGCCAGCAGGGG+AGG | + | chr4_1:76622770-76622789 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 76621060 | 76622933 | 76621060 | ID=Msa0573430;Name=Msa0573430 |
| chr4_1 | mRNA | 76621060 | 76622933 | 76621060 | ID=Msa0573430-mRNA-1;Parent=Msa0573430;Name=Msa0573430-mRNA-1;_AED=0.17;_eAED=0.17;_QI=173|1|1|1|1|1|3|120|274 |
| chr4_1 | exon | 76621060 | 76621500 | 76621060 | ID=Msa0573430-mRNA-1:exon:26870;Parent=Msa0573430-mRNA-1 |
| chr4_1 | exon | 76621764 | 76621957 | 76621764 | ID=Msa0573430-mRNA-1:exon:26869;Parent=Msa0573430-mRNA-1 |
| chr4_1 | exon | 76622451 | 76622933 | 76622451 | ID=Msa0573430-mRNA-1:exon:26868;Parent=Msa0573430-mRNA-1 |
| chr4_1 | five_prime_UTR | 76622761 | 76622933 | 76622761 | ID=Msa0573430-mRNA-1:five_prime_utr;Parent=Msa0573430-mRNA-1 |
| chr4_1 | CDS | 76622451 | 76622760 | 76622451 | ID=Msa0573430-mRNA-1:cds;Parent=Msa0573430-mRNA-1 |
| chr4_1 | CDS | 76621764 | 76621957 | 76621764 | ID=Msa0573430-mRNA-1:cds;Parent=Msa0573430-mRNA-1 |
| chr4_1 | CDS | 76621180 | 76621500 | 76621180 | ID=Msa0573430-mRNA-1:cds;Parent=Msa0573430-mRNA-1 |
| chr4_1 | three_prime_UTR | 76621060 | 76621179 | 76621060 | ID=Msa0573430-mRNA-1:three_prime_utr;Parent=Msa0573430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
