AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0580170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580170 MtrunA17_Chr8g0384201 95.102 490 23 1 1 490 1 489 0.0 953
Msa0580170 MtrunA17_Chr8g0364791 72.784 485 84 7 1 484 1 438 0.0 680
Msa0580170 MtrunA17_Chr3g0130101 62.553 235 82 3 1 229 1 235 5.24e-102 310
Msa0580170 MtrunA17_Chr1g0201021 54.857 175 79 0 7 181 20 194 4.05e-65 220
Msa0580170 MtrunA17_Chr1g0197361 54.651 172 72 3 8 176 10 178 6.69e-64 217
Msa0580170 MtrunA17_Chr3g0092671 52.000 175 78 3 7 178 6 177 3.49e-61 209
Msa0580170 MtrunA17_Chr1g0197351 52.660 188 82 2 6 187 42 228 2.19e-56 195
Msa0580170 MtrunA17_Chr6g0481091 52.941 153 72 0 6 158 6 158 1.93e-54 182
Msa0580170 MtrunA17_Chr2g0309891 52.229 157 74 1 1 156 1 157 5.58e-53 182
Msa0580170 MtrunA17_Chr5g0433781 49.112 169 85 1 1 168 1 169 1.04e-50 182
Msa0580170 MtrunA17_Chr3g0109821 49.112 169 84 2 1 167 1 169 5.91e-50 181
Msa0580170 MtrunA17_Chr5g0428991 46.497 157 84 0 1 157 20 176 4.10e-47 172
Msa0580170 MtrunA17_Chr3g0128151 47.436 156 82 0 1 156 17 172 4.64e-46 169
Msa0580170 MtrunA17_Chr4g0056541 45.078 193 96 6 8 196 9 195 6.28e-46 164
Msa0580170 MtrunA17_Chr5g0400461 43.784 185 94 2 1 178 1 182 1.32e-45 162
Msa0580170 MtrunA17_Chr4g0054791 45.455 165 87 1 1 162 1 165 3.82e-45 160
Msa0580170 MtrunA17_Chr3g0128111 46.711 152 77 2 7 156 43 192 5.05e-45 158
Msa0580170 MtrunA17_Chr2g0309331 45.882 170 84 4 8 175 12 175 5.29e-45 160
Msa0580170 MtrunA17_Chr4g0060931 45.912 159 82 2 6 162 17 173 1.52e-44 160
Msa0580170 MtrunA17_Chr4g0076731 44.872 156 77 4 6 158 54 203 1.94e-44 161
Msa0580170 MtrunA17_Chr8g0372121 48.344 151 75 2 8 157 8 156 3.19e-44 157
Msa0580170 MtrunA17_Chr7g0217721 42.541 181 86 3 5 169 18 196 5.75e-44 158
Msa0580170 MtrunA17_Chr4g0017921 48.701 154 69 3 8 157 10 157 5.90e-44 158
Msa0580170 MtrunA17_Chr3g0091921 46.541 159 81 2 6 162 16 172 6.55e-44 157
Msa0580170 MtrunA17_Chr1g0200561 47.239 163 77 4 8 166 21 178 6.97e-44 158
Msa0580170 MtrunA17_Chr4g0018391 41.341 179 95 5 8 183 9 180 2.76e-43 156
Msa0580170 MtrunA17_Chr6g0453451 43.023 172 90 3 5 172 19 186 7.15e-43 154
Msa0580170 MtrunA17_Chr8g0361731 42.593 162 80 4 6 156 14 173 8.47e-43 156
Msa0580170 MtrunA17_Chr6g0453131 44.099 161 78 4 6 156 15 173 1.27e-42 155
Msa0580170 MtrunA17_Chr6g0484441 46.358 151 77 2 6 156 5 151 3.03e-42 153
Msa0580170 MtrunA17_Chr5g0398971 41.361 191 98 6 8 194 9 189 3.38e-42 153
Msa0580170 MtrunA17_Chr2g0318081 40.909 176 99 2 1 173 11 184 3.56e-42 153
Msa0580170 MtrunA17_Chr2g0316971 48.125 160 75 4 6 160 23 179 7.71e-42 153
Msa0580170 MtrunA17_Chr5g0417001 36.052 233 113 7 6 227 14 221 7.91e-42 153
Msa0580170 MtrunA17_Chr5g0405211 46.104 154 74 3 8 157 10 158 1.21e-41 152
Msa0580170 MtrunA17_Chr8g0346001 42.945 163 77 3 8 157 17 176 1.62e-41 154
Msa0580170 MtrunA17_Chr3g0124761 44.586 157 81 3 5 158 6 159 1.44e-40 147
Msa0580170 MtrunA17_Chr4g0038751 49.673 153 67 3 7 156 16 161 3.22e-40 147
Msa0580170 MtrunA17_Chr2g0318101 41.146 192 93 6 4 182 13 197 3.85e-40 148
Msa0580170 MtrunA17_Chr7g0253011 45.912 159 74 4 6 156 17 171 4.02e-40 149
Msa0580170 MtrunA17_Chr7g0217711 47.482 139 71 1 5 143 18 154 2.06e-39 140
Msa0580170 MtrunA17_Chr6g0461661 44.872 156 78 4 6 156 18 170 2.24e-39 146
Msa0580170 MtrunA17_Chr3g0139331 42.767 159 85 3 6 162 11 165 5.67e-39 144
Msa0580170 MtrunA17_Chr7g0252971 41.463 164 81 3 6 156 8 169 6.48e-39 144
Msa0580170 MtrunA17_Chr4g0042561 42.331 163 88 3 2 160 5 165 8.09e-39 142
Msa0580170 MtrunA17_Chr3g0130731 42.038 157 85 3 5 158 6 159 1.62e-38 142
Msa0580170 MtrunA17_Chr8g0359921 43.871 155 79 3 6 156 14 164 2.11e-38 142
Msa0580170 MtrunA17_Chr7g0263931 41.212 165 88 4 5 163 10 171 4.67e-38 141
Msa0580170 MtrunA17_Chr8g0384721 41.139 158 86 3 5 158 6 160 7.11e-38 140
Msa0580170 MtrunA17_Chr5g0417791 43.312 157 83 3 5 157 2 156 9.95e-38 139
Msa0580170 MtrunA17_Chr7g0214071 43.373 166 81 4 5 166 14 170 3.69e-37 137
Msa0580170 MtrunA17_Chr4g0047841 48.485 132 64 2 4 133 13 142 7.70e-37 139
Msa0580170 MtrunA17_Chr8g0345691 44.595 148 73 5 9 153 15 156 1.89e-36 139
Msa0580170 MtrunA17_Chr2g0311651 40.606 165 82 3 7 156 23 186 2.52e-36 136
Msa0580170 MtrunA17_Chr2g0326361 42.581 155 81 4 8 156 16 168 4.41e-36 136
Msa0580170 MtrunA17_Chr2g0312321 42.767 159 82 4 1 156 6 158 5.32e-36 135
Msa0580170 MtrunA17_Chr5g0442771 40.491 163 83 4 6 156 18 178 6.21e-36 135
Msa0580170 MtrunA17_Chr1g0147421 42.857 154 81 4 6 156 27 176 4.35e-35 134
Msa0580170 MtrunA17_Chr2g0311661 47.328 131 64 2 7 133 22 151 6.01e-35 132
Msa0580170 MtrunA17_Chr3g0144271 45.985 137 69 3 6 139 23 157 1.08e-34 134
Msa0580170 MtrunA17_Chr1g0183741 41.176 153 82 3 6 156 10 156 2.29e-34 130
Msa0580170 MtrunA17_Chr8g0345671 43.243 148 75 5 9 153 14 155 2.82e-34 133
Msa0580170 MtrunA17_Chr8g0345711 46.457 127 64 3 9 132 15 140 6.85e-34 125
Msa0580170 MtrunA17_Chr7g0261411 40.789 152 82 3 6 155 10 155 1.69e-33 128
Msa0580170 MtrunA17_Chr8g0385991 39.080 174 91 4 2 168 10 175 2.70e-33 125
Msa0580170 MtrunA17_Chr8g0345741 48.276 116 56 3 19 131 4 118 1.30e-32 121
Msa0580170 MtrunA17_Chr2g0321741 42.969 128 65 2 26 153 12 131 3.35e-32 126
Msa0580170 MtrunA17_Chr8g0345721 40.123 162 61 5 9 135 38 198 3.94e-31 119
Msa0580170 MtrunA17_Chr3g0131911 37.572 173 94 3 2 164 10 178 5.56e-31 120
Msa0580170 MtrunA17_Chr8g0345731 43.846 130 66 4 9 132 27 155 1.45e-30 116
Msa0580170 MtrunA17_Chr3g0113001 41.379 116 60 3 60 169 17 130 7.02e-28 112
Msa0580170 MtrunA17_Chr2g0321631 36.478 159 93 6 8 158 6 164 1.17e-26 108
Msa0580170 MtrunA17_Chr7g0266701 33.333 159 96 5 8 156 6 164 1.33e-25 105
Msa0580170 MtrunA17_Chr8g0345701 39.007 141 66 5 9 132 10 147 6.14e-25 101
Msa0580170 MtrunA17_Chr3g0113031 41.346 104 54 3 72 169 4 106 3.75e-24 101
Msa0580170 MtrunA17_Chr4g0050701 36.250 160 84 5 6 157 11 160 1.06e-23 98.2
Msa0580170 MtrunA17_Chr4g0026141 34.568 162 91 5 8 158 7 164 2.89e-23 99.0
Msa0580170 MtrunA17_Chr7g0243371 51.282 78 34 2 60 133 14 91 4.09e-20 85.9
Msa0580170 MtrunA17_Chr8g0384351 32.317 164 83 7 5 165 9 147 3.98e-17 79.3
Msa0580170 MtrunA17_Chr3g0130321 31.818 176 99 7 5 167 6 173 3.20e-15 74.7
Msa0580170 MtrunA17_Chr7g0251651 30.469 128 85 4 5 131 17 141 4.67e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580170 AT5G09330.5 54.812 239 102 2 1 235 1 237 1.77e-85 272
Msa0580170 AT5G09330.2 54.812 239 102 2 1 235 1 237 1.77e-85 272
Msa0580170 AT5G09330.4 54.812 239 102 2 1 235 1 237 1.77e-85 272
Msa0580170 AT5G09330.3 54.812 239 102 2 1 235 1 237 1.77e-85 272
Msa0580170 AT5G09330.1 54.812 239 102 2 1 235 1 237 1.77e-85 272
Msa0580170 AT5G64060.1 53.947 228 103 1 1 228 1 226 1.42e-80 254
Msa0580170 AT5G04410.1 44.856 243 129 1 2 239 5 247 6.95e-71 236
Msa0580170 AT3G10500.1 55.294 170 76 0 2 171 5 174 4.99e-68 228
Msa0580170 AT3G10490.1 51.295 193 84 3 6 197 27 210 2.37e-64 209
Msa0580170 AT3G10480.1 50.000 200 90 3 6 204 27 217 4.21e-63 212
Msa0580170 AT3G10480.2 49.261 203 94 2 6 208 27 220 4.29e-63 212
Msa0580170 AT3G10490.2 51.295 193 84 3 6 197 27 210 6.64e-63 211
Msa0580170 AT1G34180.3 46.196 184 93 1 7 184 17 200 2.59e-57 197
Msa0580170 AT3G10480.3 39.630 270 125 5 6 238 27 295 4.56e-57 198
Msa0580170 AT1G34190.1 46.875 192 101 1 7 198 17 207 7.33e-57 198
Msa0580170 AT1G34180.1 46.196 184 93 1 7 184 17 200 1.66e-56 197
Msa0580170 AT3G17730.1 53.797 158 73 0 1 158 1 158 2.52e-55 185
Msa0580170 AT1G34180.4 43.367 196 93 2 7 184 17 212 8.31e-54 187
Msa0580170 AT1G34180.2 43.367 196 93 2 7 184 17 212 4.43e-53 188
Msa0580170 AT1G65910.1 48.503 167 86 0 1 167 1 167 1.91e-51 185
Msa0580170 AT1G33060.2 49.359 156 79 0 1 156 19 174 1.48e-50 183
Msa0580170 AT1G33060.1 49.359 156 79 0 1 156 19 174 1.56e-50 182
Msa0580170 AT2G27300.1 49.673 153 69 2 1 153 9 153 1.99e-49 172
Msa0580170 AT5G24590.2 47.468 158 82 1 1 157 8 165 2.66e-48 172
Msa0580170 AT3G49530.2 40.376 213 110 4 1 210 8 206 1.01e-47 170
Msa0580170 AT3G03200.1 50.955 157 76 1 1 156 1 157 1.33e-47 171
Msa0580170 AT3G49530.1 40.376 213 110 4 1 210 8 206 3.23e-47 170
Msa0580170 AT5G61430.1 47.799 159 79 2 6 162 16 172 1.15e-46 165
Msa0580170 AT5G17260.1 48.408 157 80 1 1 156 1 157 2.64e-46 168
Msa0580170 AT1G54330.1 48.466 163 81 1 1 163 1 160 3.98e-46 163
Msa0580170 AT4G10350.1 48.052 154 73 2 8 157 11 161 1.06e-45 163
Msa0580170 AT5G46590.1 48.366 153 77 2 6 156 6 158 1.25e-45 161
Msa0580170 AT1G71930.2 38.679 212 112 5 8 212 11 211 2.39e-45 161
Msa0580170 AT1G71930.1 38.679 212 112 5 8 212 11 211 2.39e-45 161
Msa0580170 AT4G17980.1 48.387 155 76 2 6 156 6 160 2.47e-45 159
Msa0580170 AT4G35580.1 45.513 156 85 0 1 156 4 159 3.24e-45 166
Msa0580170 AT4G17980.2 47.500 160 80 2 1 156 1 160 3.37e-45 160
Msa0580170 AT4G35580.2 45.513 156 85 0 1 156 4 159 3.91e-45 166
Msa0580170 AT4G35580.3 45.513 156 85 0 1 156 4 159 4.17e-45 166
Msa0580170 AT1G12260.2 42.308 182 98 4 8 187 9 185 1.33e-44 160
Msa0580170 AT1G32870.2 48.810 168 82 2 6 171 10 175 1.34e-44 164
Msa0580170 AT1G32870.1 48.810 168 82 2 6 171 10 175 1.40e-44 164
Msa0580170 AT1G12260.1 42.308 182 98 4 8 187 9 185 1.42e-44 161
Msa0580170 AT5G22290.1 46.753 154 73 3 1 153 16 161 1.46e-44 160
Msa0580170 AT5G39610.1 47.799 159 79 2 6 162 20 176 2.43e-44 157
Msa0580170 AT3G44290.2 45.395 152 75 2 2 153 10 153 4.32e-44 155
Msa0580170 AT1G32870.3 48.810 168 82 2 6 171 46 211 4.40e-44 163
Msa0580170 AT5G46590.2 51.852 135 64 1 6 139 6 140 6.30e-44 156
Msa0580170 AT1G62700.1 41.579 190 102 5 8 193 9 193 6.45e-44 159
Msa0580170 AT1G62700.2 41.579 190 102 5 8 193 9 193 6.45e-44 159
Msa0580170 AT5G07680.2 45.912 159 82 2 6 162 3 159 1.20e-43 157
Msa0580170 AT5G07680.1 45.912 159 82 2 6 162 17 173 1.83e-43 156
Msa0580170 AT2G02450.1 44.156 154 81 3 6 158 51 200 2.64e-43 157
Msa0580170 AT3G44290.1 45.395 152 75 2 2 153 10 153 3.97e-43 156
Msa0580170 AT2G02450.2 44.156 154 81 3 6 158 51 200 4.86e-43 157
Msa0580170 AT1G33280.1 46.104 154 73 3 8 157 10 157 1.02e-42 154
Msa0580170 AT4G36160.1 44.509 173 82 4 8 177 12 173 1.21e-42 155
Msa0580170 AT4G36160.3 44.509 173 82 4 8 177 12 173 1.21e-42 155
Msa0580170 AT4G36160.2 44.509 173 82 4 8 177 16 177 1.34e-42 155
Msa0580170 AT1G69490.1 41.711 187 101 3 6 188 9 191 1.39e-42 152
Msa0580170 AT2G18060.3 37.395 238 118 8 8 238 11 224 1.89e-42 155
Msa0580170 AT2G18060.1 37.395 238 118 8 8 238 11 224 1.89e-42 155
Msa0580170 AT1G32510.1 43.396 159 82 2 6 156 6 164 2.11e-42 152
Msa0580170 AT1G79580.3 47.368 152 75 3 8 157 19 167 6.01e-42 154
Msa0580170 AT1G79580.5 47.368 152 75 3 8 157 19 167 6.01e-42 154
Msa0580170 AT1G79580.4 47.368 152 75 3 8 157 19 167 6.01e-42 154
Msa0580170 AT1G79580.2 47.368 152 75 3 8 157 19 167 6.01e-42 154
Msa0580170 AT1G79580.1 47.368 152 75 3 8 157 19 167 6.01e-42 154
Msa0580170 AT3G12977.1 43.478 161 88 2 1 160 13 171 1.03e-41 150
Msa0580170 AT3G29035.1 44.910 167 88 2 6 170 24 188 1.35e-41 151
Msa0580170 AT1G26870.1 43.827 162 78 4 6 156 16 175 1.87e-41 153
Msa0580170 AT5G62380.2 44.586 157 84 2 2 157 3 157 2.58e-41 151
Msa0580170 AT5G62380.1 44.586 157 84 2 2 157 3 157 2.58e-41 151
Msa0580170 AT2G24430.2 46.405 153 77 3 6 156 16 165 2.96e-41 150
Msa0580170 AT2G24430.1 46.405 153 77 3 6 156 16 165 2.96e-41 150
Msa0580170 AT5G39820.1 41.379 174 77 4 6 156 20 191 3.49e-41 150
Msa0580170 AT3G04060.1 45.223 157 81 3 6 159 20 174 3.50e-41 150
Msa0580170 AT5G66300.1 38.073 218 129 5 8 222 14 228 4.68e-41 149
Msa0580170 AT5G08790.1 43.671 158 81 3 6 158 7 161 4.92e-41 149
Msa0580170 AT3G18400.1 43.312 157 86 2 6 162 5 158 6.28e-41 149
Msa0580170 AT5G18270.1 46.541 159 76 4 6 159 21 175 6.63e-41 150
Msa0580170 AT5G18270.2 47.170 159 75 4 6 159 21 175 9.10e-41 149
Msa0580170 AT1G01720.1 40.426 188 101 4 5 184 6 190 9.30e-41 148
Msa0580170 AT4G27410.2 41.212 165 95 1 1 165 9 171 1.22e-40 148
Msa0580170 AT2G43000.1 45.033 151 80 2 7 156 19 167 1.44e-40 147
Msa0580170 AT1G76420.1 45.806 155 79 3 6 158 22 173 3.66e-40 148
Msa0580170 AT2G46770.1 41.317 167 78 4 8 157 18 181 1.01e-39 147
Msa0580170 AT1G52890.1 40.936 171 95 2 6 172 14 182 1.12e-39 146
Msa0580170 AT5G53950.1 48.077 156 73 4 6 156 17 169 1.45e-39 147
Msa0580170 AT3G15500.1 42.038 157 89 1 1 157 9 163 1.49e-39 145
Msa0580170 AT3G15170.1 45.283 159 81 3 8 162 22 178 1.85e-39 145
Msa0580170 AT3G61910.1 41.566 166 77 3 8 156 13 175 2.30e-39 145
Msa0580170 AT1G77450.1 43.506 154 81 3 8 158 12 162 5.65e-39 142
Msa0580170 AT2G17040.1 45.098 153 74 3 7 156 7 152 7.99e-39 142
Msa0580170 AT4G27410.3 39.548 177 92 2 1 162 9 185 1.78e-38 142
Msa0580170 AT1G32770.1 41.071 168 82 3 5 158 15 179 2.71e-38 143
Msa0580170 AT5G63790.1 41.772 158 84 3 6 158 50 204 3.96e-38 142
Msa0580170 AT1G56010.2 35.185 270 135 9 1 253 14 260 4.66e-38 142
Msa0580170 AT5G63790.2 41.772 158 84 3 6 158 60 214 5.40e-38 142
Msa0580170 AT1G61110.1 42.169 166 81 3 4 156 14 177 1.58e-37 140
Msa0580170 AT5G13180.1 45.122 164 82 3 2 163 10 167 2.84e-37 137
Msa0580170 AT3G15510.1 43.125 160 76 5 10 156 21 178 3.78e-36 137
Msa0580170 AT5G04395.1 46.575 146 64 2 6 137 28 173 4.69e-36 132
Msa0580170 AT3G04070.2 42.683 164 78 4 6 156 10 170 4.84e-36 137
Msa0580170 AT4G01520.1 45.752 153 73 4 9 156 7 154 6.56e-35 132
Msa0580170 AT2G33480.2 44.937 158 76 3 2 157 11 159 1.19e-34 131
Msa0580170 AT2G33480.1 44.937 158 78 2 2 157 11 161 2.36e-34 130
Msa0580170 AT4G01540.3 45.860 157 75 4 5 156 3 154 3.16e-34 134
Msa0580170 AT3G04070.1 37.430 179 82 3 6 156 10 186 3.37e-34 132
Msa0580170 AT4G01540.4 46.405 153 72 4 9 156 7 154 4.25e-34 132
Msa0580170 AT4G01540.2 46.405 153 72 4 9 156 7 154 7.12e-34 132
Msa0580170 AT4G01540.1 46.405 153 72 4 9 156 7 154 8.39e-34 133
Msa0580170 AT3G12910.1 46.212 132 63 3 7 133 22 150 9.59e-33 127
Msa0580170 AT4G28530.1 40.000 170 78 4 5 156 9 172 7.13e-32 125
Msa0580170 AT3G12977.2 49.515 103 51 1 60 161 17 119 1.76e-31 121
Msa0580170 AT5G61430.2 49.524 105 51 1 60 162 5 109 2.79e-31 122
Msa0580170 AT4G01550.1 41.279 172 82 5 9 170 7 169 6.52e-31 125
Msa0580170 AT1G52880.1 40.881 159 80 4 10 156 21 177 6.62e-31 122
Msa0580170 AT3G10490.4 48.739 119 51 3 80 197 1 110 8.43e-31 122
Msa0580170 AT3G10490.3 48.739 119 51 3 80 197 1 110 8.43e-31 122
Msa0580170 AT4G10350.2 49.474 95 48 0 63 157 20 114 2.41e-29 117
Msa0580170 AT1G56010.1 34.951 206 105 6 60 253 5 193 9.26e-27 109
Msa0580170 AT3G44350.2 36.478 159 96 5 5 158 4 162 1.79e-24 102
Msa0580170 AT5G22380.1 34.161 161 99 5 5 158 4 164 7.39e-24 100
Msa0580170 AT3G44350.1 36.943 157 94 5 5 156 4 160 3.32e-23 96.3
Msa0580170 AT1G02230.1 37.333 150 82 5 9 153 6 148 9.45e-23 100
Msa0580170 AT3G04420.2 36.667 150 88 3 9 156 6 150 5.21e-22 96.7
Msa0580170 AT3G04420.1 36.667 150 88 3 9 156 6 150 2.57e-21 95.5
Msa0580170 AT2G33480.3 46.316 95 51 0 63 157 10 104 3.66e-21 92.0
Msa0580170 AT1G02250.1 37.984 129 72 3 9 132 6 131 1.75e-20 93.2
Msa0580170 AT5G64530.1 40.152 132 63 5 6 135 3 120 7.87e-19 84.7
Msa0580170 AT5G64530.2 40.152 132 63 5 6 135 3 120 1.48e-18 83.2
Msa0580170 AT2G18060.2 33.333 156 78 6 87 238 3 136 8.29e-18 84.0
Msa0580170 AT1G02220.1 33.108 148 89 4 9 154 6 145 8.42e-18 85.9
Msa0580170 AT4G28530.2 35.878 131 64 3 5 117 9 137 5.77e-17 82.0
Msa0580170 AT2G43000.2 39.535 86 51 1 72 156 4 89 5.40e-16 77.0
Msa0580170 AT5G22290.2 43.478 69 31 2 86 153 1 62 7.70e-16 77.4
Msa0580170 AT1G01010.1 33.333 156 85 6 9 153 6 153 1.53e-15 79.0
Msa0580170 AT3G56530.1 30.872 149 98 3 8 154 54 199 1.61e-14 75.1
Msa0580170 AT3G04430.1 31.159 138 71 6 12 132 6 136 5.11e-12 65.5

Find 174 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCGAAATAAATAAATTTA+TGG 0.150624 4_1:-85231494 Msa0580170:exon
AATCATTCGATCTCCGATTT+AGG 0.156160 4_1:-85234306 Msa0580170:five_prime_UTR
TTATTTCGACTCCAACTTTC+AGG 0.173690 4_1:+85231506 None:intergenic
ATGAAACGAGCTACGGAAAT+TGG 0.193778 4_1:-85233579 Msa0580170:CDS
TTTGATGGCTATACCTAAAT+TGG 0.207613 4_1:-85233913 Msa0580170:exon
CGAAATCCAGGTACCAATTT+AGG 0.218874 4_1:+85233900 None:intergenic
AACCAATATATCCACTAATT+TGG 0.228743 4_1:+85232551 None:intergenic
GATTCAGTCGTTGGCTCTTT+TGG 0.238821 4_1:-85231415 Msa0580170:three_prime_UTR
CGTGGATTGCTCGTCTGATT+TGG 0.251020 4_1:-85231657 Msa0580170:CDS
TGGCTTCTACGGGCAATGTT+GGG 0.251527 4_1:-85231595 Msa0580170:CDS
GAAAGACTCATTGTTTGAAT+TGG 0.255251 4_1:-85231391 Msa0580170:three_prime_UTR
CTCCAAATTAGTGGATATAT+TGG 0.264406 4_1:-85232553 Msa0580170:CDS
TTTATAATCACTATTACTAT+TGG 0.268107 4_1:-85231215 Msa0580170:three_prime_UTR
CCTAGGAATGGTGCACAATA+TGG 0.269913 4_1:-85232697 Msa0580170:CDS
CCTGTTTGACATGGATTTGC+AGG 0.278572 4_1:+85232442 None:intergenic
TTATCTCCAAAACGGGGATT+TGG 0.288256 4_1:-85233652 Msa0580170:CDS
TTATAATCACTATTACTATT+GGG 0.294360 4_1:-85231214 Msa0580170:three_prime_UTR
CACACACGGGCTGGCTTCTA+CGG 0.300862 4_1:-85231606 Msa0580170:CDS
TGTTATTGAATTTGATTTGA+TGG 0.304787 4_1:-85233928 Msa0580170:exon
TCATTAACAGTTTGATTGTC+TGG 0.311175 4_1:+85232016 None:intergenic
CTCCAGTCTTCCTCATTAAA+TGG 0.323348 4_1:+85232670 None:intergenic
ATTAGATGTCACAGGCAAAC+TGG 0.327321 4_1:+85232600 None:intergenic
CTGGCTTCTACGGGCAATGT+TGG 0.327912 4_1:-85231596 Msa0580170:CDS
GGCTTCTACGGGCAATGTTG+GGG 0.330102 4_1:-85231594 Msa0580170:CDS
TCAAAATCGTCTTTCGTCAT+TGG 0.330957 4_1:-85234184 Msa0580170:five_prime_UTR
ATCATTCGATCTCCGATTTA+GGG 0.332550 4_1:-85234305 Msa0580170:five_prime_UTR
CTTGCGAGTTCATGTCAAAT+AGG 0.339836 4_1:-85232187 Msa0580170:CDS
GTGGATTGCTCGTCTGATTT+GGG 0.344683 4_1:-85231656 Msa0580170:CDS
GAGCTACGGAAATTGGGTTT+TGG 0.345895 4_1:-85233572 Msa0580170:CDS
ATCAGAATTGGCGCCTTCTC+TGG 0.347156 4_1:-85232509 Msa0580170:CDS
TCCGTAGCTCGTTTCATCCT+TGG 0.348857 4_1:+85233585 None:intergenic
CTTCGATACTTCTTCTCAAT+AGG 0.351450 4_1:+85233612 None:intergenic
CCTTCAAATTCTTGTCAAAC+AGG 0.351866 4_1:-85232313 Msa0580170:CDS
TGTCCCTTTAGAACCTTGTT+TGG 0.354330 4_1:-85231185 Msa0580170:three_prime_UTR
TGATTAAATACTTTCTTAAG+AGG 0.359307 4_1:-85233854 Msa0580170:CDS
TCTGTTTGACATGAATTTGC+AGG 0.364697 4_1:+85232229 None:intergenic
CCTGTTTGACATGAATTTGC+TGG 0.368512 4_1:+85232355 None:intergenic
AAAGACTCATTGTTTGAATT+GGG 0.372414 4_1:-85231390 Msa0580170:three_prime_UTR
AATTATCTTATCTCCAAAAC+GGG 0.377898 4_1:-85233659 Msa0580170:CDS
ACCACTCCAAATCCCCGTTT+TGG 0.379266 4_1:+85233646 None:intergenic
TGACAAGAATTTGAAGGGTC+TGG 0.381024 4_1:+85232319 None:intergenic
GCATGACGACTTCGATTTCA+TGG 0.381469 4_1:-85231570 Msa0580170:CDS
CTATTGCTGTTGTGCTGGCT+TGG 0.386703 4_1:-85231442 Msa0580170:three_prime_UTR
TCTGGATATGAATCATTTGC+AGG 0.389690 4_1:+85232034 None:intergenic
TCTGGATATGAATCATTTGC+AGG 0.389690 4_1:+85232145 None:intergenic
TCGTTAACAGCTTGATTGTC+TGG 0.392462 4_1:+85232127 None:intergenic
GTCGAAATAAATAAATTTAT+GGG 0.392754 4_1:-85231493 Msa0580170:exon
TGACAAGAATTCACAGGGTC+TGG 0.397096 4_1:+85232277 None:intergenic
CCTGTGAATTCTTGTCAAAC+AGG 0.404297 4_1:-85232271 Msa0580170:CDS
TGACATGGATTTGCAGGGTC+AGG 0.408876 4_1:+85232448 None:intergenic
CCTGTGAATCCTTGTCAAAC+AGG 0.414356 4_1:-85232400 Msa0580170:CDS
GATCAGAATCTCCAAATTAG+TGG 0.414516 4_1:-85232562 Msa0580170:CDS
TCGACTCCAACTTTCAGGTT+GGG 0.415732 4_1:+85231511 None:intergenic
CCTGTTTGACAAGAATTTGA+AGG 0.420779 4_1:+85232313 None:intergenic
TGACAAGGATTCACAGGGTC+TGG 0.422865 4_1:+85232406 None:intergenic
TTATGAACCTTGGCAGACTT+TGG 0.423046 4_1:-85234214 Msa0580170:five_prime_UTR
CTGTTTGACATGAATTTGTT+GGG 0.425559 4_1:+85232485 None:intergenic
TGACATGAACTCGCAAGGTC+AGG 0.427713 4_1:+85232193 None:intergenic
CCAACAAATTCATGTCAAAC+AGG 0.430400 4_1:-85232484 Msa0580170:CDS
CCTGTTTGACATGAATTTGT+TGG 0.430797 4_1:+85232484 None:intergenic
GAATTATCTTATCTCCAAAA+CGG 0.437695 4_1:-85233660 Msa0580170:CDS
TTGTCCAAACAAGGTTCTAA+AGG 0.439194 4_1:+85231181 None:intergenic
ATATATACAAATACGCTCCT+TGG 0.443195 4_1:-85233785 Msa0580170:CDS
TGAAACGAGCTACGGAAATT+GGG 0.444296 4_1:-85233578 Msa0580170:CDS
CCTGCAAATCCATGTCAAAC+AGG 0.444856 4_1:-85232442 Msa0580170:CDS
GGCTGACAAAGGAATTGTTC+AGG 0.445801 4_1:-85233403 Msa0580170:intron
CCATATTGTGCACCATTCCT+AGG 0.447789 4_1:+85232697 None:intergenic
GGATTTCGATTCTCTCCAAC+GGG 0.448332 4_1:-85233885 Msa0580170:CDS
TTGCTGTTGTGCTGGCTTGG+AGG 0.449846 4_1:-85231439 Msa0580170:three_prime_UTR
GTGTGCTAAAGTCTGCATTC+TGG 0.450394 4_1:+85231624 None:intergenic
CTTGGAGGTGATTCAGTCGT+TGG 0.450846 4_1:-85231424 Msa0580170:three_prime_UTR
CCAGCAAATTCATGTCAAAC+AGG 0.451371 4_1:-85232355 Msa0580170:CDS
ATCTAGACTCTGATACGTTC+TGG 0.454030 4_1:-85231538 Msa0580170:CDS
TGACATGAATTTGCTGGGTC+AGG 0.454766 4_1:+85232361 None:intergenic
CATACCGTGTCAATCAGAAT+TGG 0.460006 4_1:-85232521 Msa0580170:CDS
TGAGTATAGGCTTGAAGATA+AGG 0.460176 4_1:-85233430 Msa0580170:CDS
AAGACAGCGAAAACATAAAT+CGG 0.462830 4_1:+85234336 None:intergenic
GTCATCGGCAAACCCTAAAT+CGG 0.463051 4_1:+85234293 None:intergenic
TGTCCAAACAAGGTTCTAAA+GGG 0.463866 4_1:+85231182 None:intergenic
GAATTCACAGGGTCTGGATA+AGG 0.466095 4_1:+85232283 None:intergenic
GGATTCACAGGGTCTGGATA+AGG 0.468391 4_1:+85232412 None:intergenic
TATGAATCATTTGCAGGGTC+GGG 0.476385 4_1:+85232040 None:intergenic
CTAGGAATGGTGCACAATAT+GGG 0.477134 4_1:-85232696 Msa0580170:CDS
CTTTCTTAAGAGGAAAGTGT+TGG 0.477525 4_1:-85233844 Msa0580170:CDS
TATGAATCATTTGCAGGGTC+GGG 0.478405 4_1:+85232151 None:intergenic
TCATTTGCAGGGTCGGGCGC+AGG 0.479506 4_1:+85232046 None:intergenic
ATTGGGTTATGCATGAGTAT+AGG 0.479985 4_1:-85233443 Msa0580170:CDS
GAGCACTATTGCTGTTGTGC+TGG 0.480869 4_1:-85231447 Msa0580170:three_prime_UTR
GAATTTGCAGGGTCGGAAGC+AGG 0.480953 4_1:+85232241 None:intergenic
TTCGACTCCAACTTTCAGGT+TGG 0.483370 4_1:+85231510 None:intergenic
TTTCTTAAGAGGAAAGTGTT+GGG 0.484499 4_1:-85233843 Msa0580170:CDS
CCTGTTTGACAAGGATTCAC+AGG 0.487590 4_1:+85232400 None:intergenic
GACCATTTAATGAGGAAGAC+TGG 0.495616 4_1:-85232672 Msa0580170:CDS
TCGTGGTGATCGAACCGATT+GGG 0.500477 4_1:-85233460 Msa0580170:CDS
GGCAGACCCAACCTGAAAGT+TGG 0.501795 4_1:-85231517 Msa0580170:CDS
GTGAATAAACACGCTCTTGG+TGG 0.502131 4_1:-85231266 Msa0580170:three_prime_UTR
CGTTCTTGCTTTATGAACCT+TGG 0.503227 4_1:-85234224 Msa0580170:five_prime_UTR
CCTGTTTGACAAGAATTCAC+AGG 0.507170 4_1:+85232271 None:intergenic
ACACACGGGCTGGCTTCTAC+GGG 0.510540 4_1:-85231605 Msa0580170:CDS
TATATACAAATACGCTCCTT+GGG 0.512611 4_1:-85233784 Msa0580170:CDS
AGTGCAGCAGATTCAGCAAA+AGG 0.512913 4_1:+85232628 None:intergenic
GCTTCTACGGGCAATGTTGG+GGG 0.513160 4_1:-85231593 Msa0580170:CDS
AGACTTTAGCACACACGGGC+TGG 0.515131 4_1:-85231615 Msa0580170:CDS
TCGTCTGATTTGGGATCTGT+TGG 0.516876 4_1:-85231647 Msa0580170:CDS
TATAATCACTATTACTATTG+GGG 0.519775 4_1:-85231213 Msa0580170:three_prime_UTR
CTGTTTGACATGAATTTGCT+GGG 0.522565 4_1:+85232356 None:intergenic
CAATTCTGATTGACACGGTA+TGG 0.524497 4_1:+85232522 None:intergenic
ATTGTGAATAAACACGCTCT+TGG 0.529790 4_1:-85231269 Msa0580170:three_prime_UTR
CTGTTTGACATGAATTTGCA+GGG 0.530109 4_1:+85232230 None:intergenic
CTCGTGGTGATCGAACCGAT+TGG 0.531457 4_1:-85233461 Msa0580170:CDS
ATATGAATCATTTGCAGGGT+CGG 0.532792 4_1:+85232039 None:intergenic
GAATTTGTTGGGTCCAGAGA+AGG 0.534027 4_1:+85232496 None:intergenic
ATATGAATCATTTGCAGGGT+CGG 0.534812 4_1:+85232150 None:intergenic
GGATTCCTACGTAATCTGTA+AGG 0.535028 4_1:-85232743 Msa0580170:CDS
CTGTTTGACAAGAATTTGAA+GGG 0.535613 4_1:+85232314 None:intergenic
TCATTTGCAGGGTCGGGCAA+AGG 0.536379 4_1:+85232157 None:intergenic
AAAGCAAGAACGGTGGCGAA+CGG 0.541820 4_1:+85234235 None:intergenic
TTGAGAAGGTATAGAGTCAT+CGG 0.542248 4_1:+85234278 None:intergenic
GACATGAACTCGCAAGGTCA+GGG 0.545876 4_1:+85232194 None:intergenic
CTGTTTGACATGGATTTGCA+GGG 0.546270 4_1:+85232443 None:intergenic
TAGGCTTGAAGATAAGGACT+TGG 0.547580 4_1:-85233424 Msa0580170:CDS
CAACAGAATAATCAAACGGT+GGG 0.550179 4_1:-85233522 Msa0580170:CDS
ATACTCATGCATAACCCAAT+CGG 0.550912 4_1:+85233446 None:intergenic
TTTCTGAGATACGAGGATTG+AGG 0.552278 4_1:-85234022 Msa0580170:five_prime_UTR
GAATTTGAAGGGTCTGGAGA+AGG 0.554806 4_1:+85232325 None:intergenic
TTGACATGAATTTGCAGGGT+CGG 0.556895 4_1:+85232234 None:intergenic
GCTATACCTAAATTGGTACC+TGG 0.560520 4_1:-85233906 Msa0580170:CDS
GAATTTGCTGGGTCAGGAGA+CGG 0.560757 4_1:+85232367 None:intergenic
GGCATAAATCCTGTTTGACA+TGG 0.562278 4_1:+85232433 None:intergenic
GACTGGAGTGATGATGAAGT+AGG 0.564465 4_1:-85232655 Msa0580170:CDS
TTAATCAATTCAACTCCCGT+TGG 0.567688 4_1:+85233870 None:intergenic
CTTCTACGGGCAATGTTGGG+GGG 0.567691 4_1:-85231592 Msa0580170:CDS
GGATTTGCAGGGTCAGGAGA+AGG 0.569179 4_1:+85232454 None:intergenic
TTAGATGTCACAGGCAAACT+GGG 0.572296 4_1:+85232601 None:intergenic
GATAAGGACTTGGCTGACAA+AGG 0.573980 4_1:-85233414 Msa0580170:CDS
GTTGGAGAGAATCGAAATCC+AGG 0.580453 4_1:+85233888 None:intergenic
AGAAGTATCGAAGTGGGCCA+AGG 0.585963 4_1:-85233602 Msa0580170:CDS
GAAGGTCCTGGTCCTAGGAA+TGG 0.591114 4_1:-85232709 Msa0580170:CDS
CTGTTTGACAAGAATTCACA+GGG 0.591836 4_1:+85232272 None:intergenic
CTGTTTGACAAGGATTCACA+GGG 0.595085 4_1:+85232401 None:intergenic
TGGATTTCGATTCTCTCCAA+CGG 0.596015 4_1:-85233886 Msa0580170:CDS
TACGCTCCTTGGGATCTCCC+AGG 0.603024 4_1:-85233774 Msa0580170:intron
AAACTACCTGGGAGATCCCA+AGG 0.605145 4_1:+85233768 None:intergenic
CAAGGTTCATAAAGCAAGAA+CGG 0.608438 4_1:+85234225 None:intergenic
TGTTCAACAGAATAATCAAA+CGG 0.610587 4_1:-85233526 Msa0580170:CDS
CTATTTGACATGAACTCGCA+AGG 0.614626 4_1:+85232188 None:intergenic
ACAGAACTATTAGATGTCAC+AGG 0.615324 4_1:+85232592 None:intergenic
AGACAACGGCGTATTGCCTG+AGG 0.618252 4_1:-85231957 Msa0580170:intron
CTGGATATGAATCATTTGCA+GGG 0.618285 4_1:+85232035 None:intergenic
CTGGATATGAATCATTTGCA+GGG 0.618285 4_1:+85232146 None:intergenic
AATGCAGACTTTAGCACACA+CGG 0.626353 4_1:-85231620 Msa0580170:CDS
ATAAATCCTCCTGTTTGACA+AGG 0.629631 4_1:+85232391 None:intergenic
AAAACCCTAATATTTCACAC+TGG 0.629779 4_1:-85233492 Msa0580170:CDS
GCCAAGGATGAAACGAGCTA+CGG 0.632310 4_1:-85233586 Msa0580170:CDS
TGTGCACCATTCCTAGGACC+AGG 0.638891 4_1:+85232703 None:intergenic
TCCAAAACGGGGATTTGGAG+TGG 0.639502 4_1:-85233647 Msa0580170:CDS
ATTCAATCAAATCACAACTG+AGG 0.639509 4_1:+85233972 None:intergenic
ACATGAACTCGCAAGGTCAG+GGG 0.640717 4_1:+85232195 None:intergenic
ATATGGGAGACCATTTAATG+AGG 0.644918 4_1:-85232680 Msa0580170:CDS
AAGAACACCAAAGTCTGCCA+AGG 0.647439 4_1:+85234207 None:intergenic
GTGAATCCTTGTCAAACAGG+AGG 0.649506 4_1:-85232397 Msa0580170:CDS
TTGAGAAGAAGTATCGAAGT+GGG 0.649997 4_1:-85233608 Msa0580170:CDS
AACAGAATAATCAAACGGTG+GGG 0.675165 4_1:-85233521 Msa0580170:CDS
AAATACCTTACAGATTACGT+AGG 0.675415 4_1:+85232738 None:intergenic
ATTGAGAAGAAGTATCGAAG+TGG 0.676244 4_1:-85233609 Msa0580170:CDS
TCAACAGAATAATCAAACGG+TGG 0.680625 4_1:-85233523 Msa0580170:CDS
ATGCAGACTTTAGCACACAC+GGG 0.691963 4_1:-85231619 Msa0580170:CDS
TGTCAGGAAAACATTGCTGA+AGG 0.693858 4_1:-85231716 Msa0580170:intron
ATTATCTTATCTCCAAAACG+GGG 0.700642 4_1:-85233658 Msa0580170:CDS
GGCGCCAATTCTGATTGACA+CGG 0.715605 4_1:+85232517 None:intergenic
TGCTCTCCGAAAATATCACG+CGG 0.717278 4_1:+85231465 None:intergenic
CACACTGGAAAATCACCTCG+TGG 0.720810 4_1:-85233477 Msa0580170:CDS
GGTTCATAAAGCAAGAACGG+TGG 0.736733 4_1:+85234228 None:intergenic
CAATCGGTTCGATCACCACG+AGG 0.739524 4_1:+85233462 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATCAATTTTCAATTTTA+GGG - chr4_1:85231387-85231406 Msa0580170:three_prime_UTR 15.0%
!! AATAACATAATTCTATTTCA+AGG + chr4_1:85232554-85232573 None:intergenic 15.0%
!! AAATAATTAAAAGAAAGCAA+GGG + chr4_1:85232720-85232739 None:intergenic 15.0%
!! AGTCGAAATAAATAAATTTA+TGG - chr4_1:85234052-85234071 Msa0580170:five_prime_UTR 15.0%
!! GTCGAAATAAATAAATTTAT+GGG - chr4_1:85234053-85234072 Msa0580170:five_prime_UTR 15.0%
!!! ACTTCAGTTATTATTTTATT+AGG + chr4_1:85234204-85234223 None:intergenic 15.0%
!! TTTATAATCACTATTACTAT+TGG - chr4_1:85234331-85234350 Msa0580170:five_prime_UTR 15.0%
!! TTATAATCACTATTACTATT+GGG - chr4_1:85234332-85234351 Msa0580170:five_prime_UTR 15.0%
!!! CTTGATCAATTTTCAATTTT+AGG - chr4_1:85231386-85231405 Msa0580170:three_prime_UTR 20.0%
!!! TGTTATTGAATTTGATTTGA+TGG - chr4_1:85231618-85231637 Msa0580170:CDS 20.0%
!! TGATTAAATACTTTCTTAAG+AGG - chr4_1:85231692-85231711 Msa0580170:CDS 20.0%
!!! TTTTTTTCACCAATTTAGTA+TGG - chr4_1:85231798-85231817 Msa0580170:intron 20.0%
!! AGTAAAAAATGCACTTTATA+AGG + chr4_1:85232596-85232615 None:intergenic 20.0%
!! CAAATAATTAAAAGAAAGCA+AGG + chr4_1:85232721-85232740 None:intergenic 20.0%
!! TATAATCACTATTACTATTG+GGG - chr4_1:85234333-85234352 Msa0580170:five_prime_UTR 20.0%
! GAAAAAACACCATACTAAAT+TGG + chr4_1:85231810-85231829 None:intergenic 25.0%
!!! ATTTAGTATGGTGTTTTTTC+AGG - chr4_1:85231810-85231829 Msa0580170:intron 25.0%
! GAATTATCTTATCTCCAAAA+CGG - chr4_1:85231886-85231905 Msa0580170:intron 25.0%
! AATTATCTTATCTCCAAAAC+GGG - chr4_1:85231887-85231906 Msa0580170:intron 25.0%
! TGTTCAACAGAATAATCAAA+CGG - chr4_1:85232020-85232039 Msa0580170:CDS 25.0%
!! TTTTCCAGTGTGAAATATTA+GGG + chr4_1:85232061-85232080 None:intergenic 25.0%
!! ATTTTCCAGTGTGAAATATT+AGG + chr4_1:85232062-85232081 None:intergenic 25.0%
!!! TGTTTTGTATGAGCTTTATA+TGG - chr4_1:85232185-85232204 Msa0580170:CDS 25.0%
! ATATGGAGATATATGTGTAT+TGG - chr4_1:85232202-85232221 Msa0580170:CDS 25.0%
!!! ATGTTTTTAACAAGTTCTCT+TGG - chr4_1:85232773-85232792 Msa0580170:intron 25.0%
!! TGTAAGGTATTTCAAAAAGA+AGG - chr4_1:85232819-85232838 Msa0580170:intron 25.0%
! AACCAATATATCCACTAATT+TGG + chr4_1:85232998-85233017 None:intergenic 25.0%
! TGATGTTTCTTTATTATGTC+TGG - chr4_1:85233664-85233683 Msa0580170:intron 25.0%
! AAAATGGCATTAACATTATG+AGG + chr4_1:85233741-85233760 None:intergenic 25.0%
! ATCGCTATGATTTAGTAAAA+TGG + chr4_1:85233757-85233776 None:intergenic 25.0%
! AAAGACTCATTGTTTGAATT+GGG - chr4_1:85234156-85234175 Msa0580170:five_prime_UTR 25.0%
!! TTTTCTCAGACAATTATCAA+AGG + chr4_1:85234258-85234277 None:intergenic 25.0%
AAGACAGCGAAAACATAAAT+CGG + chr4_1:85231213-85231232 None:intergenic 30.0%
ATTCAATCAAATCACAACTG+AGG + chr4_1:85231577-85231596 None:intergenic 30.0%
! TTTGATGGCTATACCTAAAT+TGG - chr4_1:85231633-85231652 Msa0580170:CDS 30.0%
!! TTTCTTAAGAGGAAAGTGTT+GGG - chr4_1:85231703-85231722 Msa0580170:CDS 30.0%
ATATATACAAATACGCTCCT+TGG - chr4_1:85231761-85231780 Msa0580170:intron 30.0%
TATATACAAATACGCTCCTT+GGG - chr4_1:85231762-85231781 Msa0580170:intron 30.0%
ATTGGTGAAAAAAACTACCT+GGG + chr4_1:85231792-85231811 None:intergenic 30.0%
AATTGGTGAAAAAAACTACC+TGG + chr4_1:85231793-85231812 None:intergenic 30.0%
ATTATCTTATCTCCAAAACG+GGG - chr4_1:85231888-85231907 Msa0580170:intron 30.0%
AAAACCCTAATATTTCACAC+TGG - chr4_1:85232054-85232073 Msa0580170:CDS 30.0%
TCTTATCTGTTACATTGGAA+AGG + chr4_1:85232338-85232357 None:intergenic 30.0%
AAAGTAGTTGTGTCCTTTAA+TGG + chr4_1:85232428-85232447 None:intergenic 30.0%
ACACAACTACTTTAAATGCT+AGG - chr4_1:85232435-85232454 Msa0580170:CDS 30.0%
CACAACTACTTTAAATGCTA+GGG - chr4_1:85232436-85232455 Msa0580170:CDS 30.0%
TACTTTAAATGCTAGGGTTA+GGG - chr4_1:85232442-85232461 Msa0580170:CDS 30.0%
AACATATTCACAACGAGAAT+AGG + chr4_1:85232758-85232777 None:intergenic 30.0%
AAATACCTTACAGATTACGT+AGG + chr4_1:85232811-85232830 None:intergenic 30.0%
! CTCCAAATTAGTGGATATAT+TGG - chr4_1:85232993-85233012 Msa0580170:intron 30.0%
! CTGTTTGACATGAATTTGTT+GGG + chr4_1:85233064-85233083 None:intergenic 30.0%
CTGTTTGACAAGAATTTGAA+GGG + chr4_1:85233235-85233254 None:intergenic 30.0%
TCATTAACAGTTTGATTGTC+TGG + chr4_1:85233533-85233552 None:intergenic 30.0%
! CTTGATATTTTCGAAGACAA+CGG - chr4_1:85233575-85233594 Msa0580170:CDS 30.0%
! TCTTTCTACTTGTGTTTTTC+TGG - chr4_1:85233633-85233652 Msa0580170:CDS 30.0%
TATAGTCCTTGATTTCTTGA+AGG - chr4_1:85233780-85233799 Msa0580170:CDS 30.0%
AGTTATCCTTCAAGAAATCA+AGG + chr4_1:85233789-85233808 None:intergenic 30.0%
!! CTGAGTGTTGACATTATTAT+TGG - chr4_1:85233807-85233826 Msa0580170:CDS 30.0%
! TTGACATTATTATTGGTGTC+AGG - chr4_1:85233814-85233833 Msa0580170:CDS 30.0%
!!! CTCTTAACTGACTTTTTTGA+TGG - chr4_1:85233857-85233876 Msa0580170:CDS 30.0%
GAAAGACTCATTGTTTGAAT+TGG - chr4_1:85234155-85234174 Msa0580170:five_prime_UTR 30.0%
AATCATTCGATCTCCGATTT+AGG - chr4_1:85231240-85231259 Msa0580170:three_prime_UTR 35.0%
ATCATTCGATCTCCGATTTA+GGG - chr4_1:85231241-85231260 Msa0580170:three_prime_UTR 35.0%
! TTGAGAAGGTATAGAGTCAT+CGG + chr4_1:85231271-85231290 None:intergenic 35.0%
CAAGGTTCATAAAGCAAGAA+CGG + chr4_1:85231324-85231343 None:intergenic 35.0%
TCAAAATCGTCTTTCGTCAT+TGG - chr4_1:85231362-85231381 Msa0580170:three_prime_UTR 35.0%
!!! TAATCGTTTTCTGAGATACG+AGG - chr4_1:85231517-85231536 Msa0580170:CDS 35.0%
TTAATCAATTCAACTCCCGT+TGG + chr4_1:85231679-85231698 None:intergenic 35.0%
! CTTTCTTAAGAGGAAAGTGT+TGG - chr4_1:85231702-85231721 Msa0580170:CDS 35.0%
CTTCGATACTTCTTCTCAAT+AGG + chr4_1:85231937-85231956 None:intergenic 35.0%
!! ATTGAGAAGAAGTATCGAAG+TGG - chr4_1:85231937-85231956 Msa0580170:intron 35.0%
!! TTGAGAAGAAGTATCGAAGT+GGG - chr4_1:85231938-85231957 Msa0580170:intron 35.0%
TCAACAGAATAATCAAACGG+TGG - chr4_1:85232023-85232042 Msa0580170:CDS 35.0%
CAACAGAATAATCAAACGGT+GGG - chr4_1:85232024-85232043 Msa0580170:CDS 35.0%
AACAGAATAATCAAACGGTG+GGG - chr4_1:85232025-85232044 Msa0580170:CDS 35.0%
ATACTCATGCATAACCCAAT+CGG + chr4_1:85232103-85232122 None:intergenic 35.0%
ATTGGGTTATGCATGAGTAT+AGG - chr4_1:85232103-85232122 Msa0580170:CDS 35.0%
TGAGTATAGGCTTGAAGATA+AGG - chr4_1:85232116-85232135 Msa0580170:CDS 35.0%
GTATTCACCAGTTCAATATG+TGG + chr4_1:85232231-85232250 None:intergenic 35.0%
ATATTGAACTGGTGAATACG+TGG - chr4_1:85232232-85232251 Msa0580170:CDS 35.0%
TTATATGCATTCGCAGTCAA+AGG + chr4_1:85232274-85232293 None:intergenic 35.0%
GTATCAAGACTGTGAGTAAA+AGG + chr4_1:85232301-85232320 None:intergenic 35.0%
TGGAAAGGAATATATGCCAA+TGG + chr4_1:85232323-85232342 None:intergenic 35.0%
TCCAATGTAACAGATAAGAC+CGG - chr4_1:85232339-85232358 Msa0580170:CDS 35.0%
! TGTGCATCAAAAGCATATTC+CGG + chr4_1:85232361-85232380 None:intergenic 35.0%
AATGGCATTAGTGACACAAT+AGG + chr4_1:85232410-85232429 None:intergenic 35.0%
! TGTGTCACTAATGCCATTAA+AGG - chr4_1:85232412-85232431 Msa0580170:CDS 35.0%
CTACTTTAAATGCTAGGGTT+AGG - chr4_1:85232441-85232460 Msa0580170:CDS 35.0%
!! TTCATGATAGTTTTGCATGC+AGG - chr4_1:85232523-85232542 Msa0580170:CDS 35.0%
TATTCACAACGAGAATAGGA+TGG + chr4_1:85232754-85232773 None:intergenic 35.0%
GTATTTCAAAAAGAAGGTCC+TGG - chr4_1:85232825-85232844 Msa0580170:intron 35.0%
ATATGGGAGACCATTTAATG+AGG - chr4_1:85232866-85232885 Msa0580170:intron 35.0%
ACAGAACTATTAGATGTCAC+AGG + chr4_1:85232957-85232976 None:intergenic 35.0%
GATCAGAATCTCCAAATTAG+TGG - chr4_1:85232984-85233003 Msa0580170:intron 35.0%
CCTGTTTGACATGAATTTGT+TGG + chr4_1:85233065-85233084 None:intergenic 35.0%
CCAACAAATTCATGTCAAAC+AGG - chr4_1:85233062-85233081 Msa0580170:intron 35.0%
ATAAATCCTCCTGTTTGACA+AGG + chr4_1:85233158-85233177 None:intergenic 35.0%
! CTGTTTGACATGAATTTGCT+GGG + chr4_1:85233193-85233212 None:intergenic 35.0%
CCTGTTTGACAAGAATTTGA+AGG + chr4_1:85233236-85233255 None:intergenic 35.0%
CCTTCAAATTCTTGTCAAAC+AGG - chr4_1:85233233-85233252 Msa0580170:intron 35.0%
CTGTTTGACAAGAATTCACA+GGG + chr4_1:85233277-85233296 None:intergenic 35.0%
CTGTTTGACATGAATTTGCA+GGG + chr4_1:85233319-85233338 None:intergenic 35.0%
TCTGTTTGACATGAATTTGC+AGG + chr4_1:85233320-85233339 None:intergenic 35.0%
ATATGAATCATTTGCAGGGT+CGG + chr4_1:85233399-85233418 None:intergenic 35.0%
CTGGATATGAATCATTTGCA+GGG + chr4_1:85233403-85233422 None:intergenic 35.0%
TCTGGATATGAATCATTTGC+AGG + chr4_1:85233404-85233423 None:intergenic 35.0%
ATATGAATCATTTGCAGGGT+CGG + chr4_1:85233399-85233418 None:intergenic 35.0%
CTGGATATGAATCATTTGCA+GGG + chr4_1:85233403-85233422 None:intergenic 35.0%
TCTGGATATGAATCATTTGC+AGG + chr4_1:85233404-85233423 None:intergenic 35.0%
AAAACAGATTAGCATACCTC+AGG + chr4_1:85233608-85233627 None:intergenic 35.0%
!!! AACTGACTTTTTTGATGGCT+TGG - chr4_1:85233862-85233881 Msa0580170:CDS 35.0%
TTATTTCGACTCCAACTTTC+AGG + chr4_1:85234043-85234062 None:intergenic 35.0%
ATTGTGAATAAACACGCTCT+TGG - chr4_1:85234277-85234296 Msa0580170:five_prime_UTR 35.0%
!! ACGATGATGCACTTTTGAGA+AGG + chr4_1:85231285-85231304 None:intergenic 40.0%
CGTTCTTGCTTTATGAACCT+TGG - chr4_1:85231322-85231341 Msa0580170:three_prime_UTR 40.0%
TTATGAACCTTGGCAGACTT+TGG - chr4_1:85231332-85231351 Msa0580170:three_prime_UTR 40.0%
!! TTTCTGAGATACGAGGATTG+AGG - chr4_1:85231524-85231543 Msa0580170:CDS 40.0%
GCTATACCTAAATTGGTACC+TGG - chr4_1:85231640-85231659 Msa0580170:CDS 40.0%
CGAAATCCAGGTACCAATTT+AGG + chr4_1:85231649-85231668 None:intergenic 40.0%
TGGATTTCGATTCTCTCCAA+CGG - chr4_1:85231660-85231679 Msa0580170:CDS 40.0%
TTATCTCCAAAACGGGGATT+TGG - chr4_1:85231894-85231913 Msa0580170:intron 40.0%
ATGAAACGAGCTACGGAAAT+TGG - chr4_1:85231967-85231986 Msa0580170:CDS 40.0%
TGAAACGAGCTACGGAAATT+GGG - chr4_1:85231968-85231987 Msa0580170:CDS 40.0%
!!! ATTGGGTTTTGGAAAGCTAC+TGG - chr4_1:85231985-85232004 Msa0580170:CDS 40.0%
TAGGCTTGAAGATAAGGACT+TGG - chr4_1:85232122-85232141 Msa0580170:CDS 40.0%
TTGGTTGCCACATATTGAAC+TGG - chr4_1:85232221-85232240 Msa0580170:CDS 40.0%
ACTCACAGTCTTGATACCAT+TGG - chr4_1:85232304-85232323 Msa0580170:CDS 40.0%
! TCCGGTCTTATCTGTTACAT+TGG + chr4_1:85232343-85232362 None:intergenic 40.0%
ACAAGTTCTCTTGGTATGAC+AGG - chr4_1:85232782-85232801 Msa0580170:intron 40.0%
GGATTCCTACGTAATCTGTA+AGG - chr4_1:85232803-85232822 Msa0580170:intron 40.0%
CTAGGAATGGTGCACAATAT+GGG - chr4_1:85232850-85232869 Msa0580170:intron 40.0%
GACCATTTAATGAGGAAGAC+TGG - chr4_1:85232874-85232893 Msa0580170:intron 40.0%
CTCCAGTCTTCCTCATTAAA+TGG + chr4_1:85232879-85232898 None:intergenic 40.0%
TTAGATGTCACAGGCAAACT+GGG + chr4_1:85232948-85232967 None:intergenic 40.0%
ATTAGATGTCACAGGCAAAC+TGG + chr4_1:85232949-85232968 None:intergenic 40.0%
CAATTCTGATTGACACGGTA+TGG + chr4_1:85233027-85233046 None:intergenic 40.0%
CATACCGTGTCAATCAGAAT+TGG - chr4_1:85233025-85233044 Msa0580170:intron 40.0%
CTGTTTGACATGGATTTGCA+GGG + chr4_1:85233106-85233125 None:intergenic 40.0%
GGCATAAATCCTGTTTGACA+TGG + chr4_1:85233116-85233135 None:intergenic 40.0%
CTGTTTGACAAGGATTCACA+GGG + chr4_1:85233148-85233167 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+TGG + chr4_1:85233194-85233213 None:intergenic 40.0%
CCAGCAAATTCATGTCAAAC+AGG - chr4_1:85233191-85233210 Msa0580170:intron 40.0%
TGACAAGAATTTGAAGGGTC+TGG + chr4_1:85233230-85233249 None:intergenic 40.0%
CCTGTTTGACAAGAATTCAC+AGG + chr4_1:85233278-85233297 None:intergenic 40.0%
CCTGTGAATTCTTGTCAAAC+AGG - chr4_1:85233275-85233294 Msa0580170:intron 40.0%
TTGACATGAATTTGCAGGGT+CGG + chr4_1:85233315-85233334 None:intergenic 40.0%
CTATTTGACATGAACTCGCA+AGG + chr4_1:85233361-85233380 None:intergenic 40.0%
CTTGCGAGTTCATGTCAAAT+AGG - chr4_1:85233359-85233378 Msa0580170:intron 40.0%
TATGAATCATTTGCAGGGTC+GGG + chr4_1:85233398-85233417 None:intergenic 40.0%
TCGTTAACAGCTTGATTGTC+TGG + chr4_1:85233422-85233441 None:intergenic 40.0%
TATGAATCATTTGCAGGGTC+GGG + chr4_1:85233398-85233417 None:intergenic 40.0%
TGTCAGGAAAACATTGCTGA+AGG - chr4_1:85233830-85233849 Msa0580170:CDS 40.0%
AATGCAGACTTTAGCACACA+CGG - chr4_1:85233926-85233945 Msa0580170:exon 40.0%
ATCTAGACTCTGATACGTTC+TGG - chr4_1:85234008-85234027 Msa0580170:five_prime_UTR 40.0%
! GTCTTTCCGCGTGATATTTT+CGG - chr4_1:85234075-85234094 Msa0580170:five_prime_UTR 40.0%
!! TGTCCCTTTAGAACCTTGTT+TGG - chr4_1:85234361-85234380 Msa0580170:five_prime_UTR 40.0%
GTCATCGGCAAACCCTAAAT+CGG + chr4_1:85231256-85231275 None:intergenic 45.0%
GGTTCATAAAGCAAGAACGG+TGG + chr4_1:85231321-85231340 None:intergenic 45.0%
AAGAACACCAAAGTCTGCCA+AGG + chr4_1:85231342-85231361 None:intergenic 45.0%
GTTGGAGAGAATCGAAATCC+AGG + chr4_1:85231661-85231680 None:intergenic 45.0%
GGATTTCGATTCTCTCCAAC+GGG - chr4_1:85231661-85231680 Msa0580170:CDS 45.0%
! GAGCTACGGAAATTGGGTTT+TGG - chr4_1:85231974-85231993 Msa0580170:CDS 45.0%
!!! GTTTTGGAAAGCTACTGGTC+AGG - chr4_1:85231990-85232009 Msa0580170:CDS 45.0%
GATAAGGACTTGGCTGACAA+AGG - chr4_1:85232132-85232151 Msa0580170:CDS 45.0%
GGCTGACAAAGGAATTGTTC+AGG - chr4_1:85232143-85232162 Msa0580170:CDS 45.0%
GGCATTAGTGACACAATAGG+TGG + chr4_1:85232407-85232426 None:intergenic 45.0%
GGTTAGGGTTATCCTTCGAA+GGG - chr4_1:85232457-85232476 Msa0580170:CDS 45.0%
ATCCTTCGAAGGGTGAAATG+TGG - chr4_1:85232467-85232486 Msa0580170:CDS 45.0%
AAAAAGAAGGTCCTGGTCCT+AGG - chr4_1:85232832-85232851 Msa0580170:intron 45.0%
CCATATTGTGCACCATTCCT+AGG + chr4_1:85232852-85232871 None:intergenic 45.0%
CCTAGGAATGGTGCACAATA+TGG - chr4_1:85232849-85232868 Msa0580170:intron 45.0%
! GACTGGAGTGATGATGAAGT+AGG - chr4_1:85232891-85232910 Msa0580170:intron 45.0%
AGTGCAGCAGATTCAGCAAA+AGG + chr4_1:85232921-85232940 None:intergenic 45.0%
!! GAATTTGTTGGGTCCAGAGA+AGG + chr4_1:85233053-85233072 None:intergenic 45.0%
CCTGTTTGACATGGATTTGC+AGG + chr4_1:85233107-85233126 None:intergenic 45.0%
CCTGCAAATCCATGTCAAAC+AGG - chr4_1:85233104-85233123 Msa0580170:intron 45.0%
CCTGTTTGACAAGGATTCAC+AGG + chr4_1:85233149-85233168 None:intergenic 45.0%
CCTGTGAATCCTTGTCAAAC+AGG - chr4_1:85233146-85233165 Msa0580170:intron 45.0%
GTGAATCCTTGTCAAACAGG+AGG - chr4_1:85233149-85233168 Msa0580170:intron 45.0%
!! TGACATGAATTTGCTGGGTC+AGG + chr4_1:85233188-85233207 None:intergenic 45.0%
GAATTTGAAGGGTCTGGAGA+AGG + chr4_1:85233224-85233243 None:intergenic 45.0%
GAATTCACAGGGTCTGGATA+AGG + chr4_1:85233266-85233285 None:intergenic 45.0%
TGACAAGAATTCACAGGGTC+TGG + chr4_1:85233272-85233291 None:intergenic 45.0%
AGGAGACAATGCAAACTGCA+GGG + chr4_1:85233721-85233740 None:intergenic 45.0%
!! TTTTGATGGCTTGGAAGACG+TGG - chr4_1:85233871-85233890 Msa0580170:CDS 45.0%
! GTGGATTGCTCGTCTGATTT+GGG - chr4_1:85233890-85233909 Msa0580170:CDS 45.0%
!! TCGTCTGATTTGGGATCTGT+TGG - chr4_1:85233899-85233918 Msa0580170:CDS 45.0%
GTGTGCTAAAGTCTGCATTC+TGG + chr4_1:85233925-85233944 None:intergenic 45.0%
ATGCAGACTTTAGCACACAC+GGG - chr4_1:85233927-85233946 Msa0580170:exon 45.0%
GCATGACGACTTCGATTTCA+TGG - chr4_1:85233976-85233995 Msa0580170:five_prime_UTR 45.0%
!! TCGACTCCAACTTTCAGGTT+GGG + chr4_1:85234038-85234057 None:intergenic 45.0%
! TTCGACTCCAACTTTCAGGT+TGG + chr4_1:85234039-85234058 None:intergenic 45.0%
TGCTCTCCGAAAATATCACG+CGG + chr4_1:85234084-85234103 None:intergenic 45.0%
!!! GATTCAGTCGTTGGCTCTTT+TGG - chr4_1:85234131-85234150 Msa0580170:five_prime_UTR 45.0%
GTGAATAAACACGCTCTTGG+TGG - chr4_1:85234280-85234299 Msa0580170:five_prime_UTR 45.0%
AAAGCAAGAACGGTGGCGAA+CGG + chr4_1:85231314-85231333 None:intergenic 50.0%
AAACTACCTGGGAGATCCCA+AGG + chr4_1:85231781-85231800 None:intergenic 50.0%
TCCAAAACGGGGATTTGGAG+TGG - chr4_1:85231899-85231918 Msa0580170:intron 50.0%
! ACCACTCCAAATCCCCGTTT+TGG + chr4_1:85231903-85231922 None:intergenic 50.0%
!! AGAAGTATCGAAGTGGGCCA+AGG - chr4_1:85231944-85231963 Msa0580170:intron 50.0%
GCCAAGGATGAAACGAGCTA+CGG - chr4_1:85231960-85231979 Msa0580170:CDS 50.0%
TCCGTAGCTCGTTTCATCCT+TGG + chr4_1:85231964-85231983 None:intergenic 50.0%
CACACTGGAAAATCACCTCG+TGG - chr4_1:85232069-85232088 Msa0580170:CDS 50.0%
TCGTGGTGATCGAACCGATT+GGG - chr4_1:85232086-85232105 Msa0580170:CDS 50.0%
GGGTTAGGGTTATCCTTCGA+AGG - chr4_1:85232456-85232475 Msa0580170:CDS 50.0%
CTCCACATTTCACCCTTCGA+AGG + chr4_1:85232472-85232491 None:intergenic 50.0%
GGCGCCAATTCTGATTGACA+CGG + chr4_1:85233032-85233051 None:intergenic 50.0%
ATCAGAATTGGCGCCTTCTC+TGG - chr4_1:85233037-85233056 Msa0580170:intron 50.0%
TGACATGGATTTGCAGGGTC+AGG + chr4_1:85233101-85233120 None:intergenic 50.0%
GGATTCACAGGGTCTGGATA+AGG + chr4_1:85233137-85233156 None:intergenic 50.0%
TGACAAGGATTCACAGGGTC+TGG + chr4_1:85233143-85233162 None:intergenic 50.0%
!! GAATTTGCTGGGTCAGGAGA+CGG + chr4_1:85233182-85233201 None:intergenic 50.0%
ACATGAACTCGCAAGGTCAG+GGG + chr4_1:85233354-85233373 None:intergenic 50.0%
GACATGAACTCGCAAGGTCA+GGG + chr4_1:85233355-85233374 None:intergenic 50.0%
TGACATGAACTCGCAAGGTC+AGG + chr4_1:85233356-85233375 None:intergenic 50.0%
GAGGAGACAATGCAAACTGC+AGG + chr4_1:85233722-85233741 None:intergenic 50.0%
! CGTGGATTGCTCGTCTGATT+TGG - chr4_1:85233889-85233908 Msa0580170:CDS 50.0%
TGGCTTCTACGGGCAATGTT+GGG - chr4_1:85233951-85233970 Msa0580170:five_prime_UTR 50.0%
! GAGCACTATTGCTGTTGTGC+TGG - chr4_1:85234099-85234118 Msa0580170:five_prime_UTR 50.0%
!! CTATTGCTGTTGTGCTGGCT+TGG - chr4_1:85234104-85234123 Msa0580170:five_prime_UTR 50.0%
CTTGGAGGTGATTCAGTCGT+TGG - chr4_1:85234122-85234141 Msa0580170:five_prime_UTR 50.0%
!! CAATCGGTTCGATCACCACG+AGG + chr4_1:85232087-85232106 None:intergenic 55.0%
CTCGTGGTGATCGAACCGAT+TGG - chr4_1:85232085-85232104 Msa0580170:CDS 55.0%
GAAGGTCCTGGTCCTAGGAA+TGG - chr4_1:85232837-85232856 Msa0580170:intron 55.0%
TGTGCACCATTCCTAGGACC+AGG + chr4_1:85232846-85232865 None:intergenic 55.0%
GGATTTGCAGGGTCAGGAGA+AGG + chr4_1:85233095-85233114 None:intergenic 55.0%
GAATTTGCAGGGTCGGAAGC+AGG + chr4_1:85233308-85233327 None:intergenic 55.0%
TCATTTGCAGGGTCGGGCAA+AGG + chr4_1:85233392-85233411 None:intergenic 55.0%
AGACAACGGCGTATTGCCTG+AGG - chr4_1:85233589-85233608 Msa0580170:CDS 55.0%
AGACTTTAGCACACACGGGC+TGG - chr4_1:85233931-85233950 Msa0580170:exon 55.0%
CTGGCTTCTACGGGCAATGT+TGG - chr4_1:85233950-85233969 Msa0580170:five_prime_UTR 55.0%
GGCTTCTACGGGCAATGTTG+GGG - chr4_1:85233952-85233971 Msa0580170:five_prime_UTR 55.0%
GCTTCTACGGGCAATGTTGG+GGG - chr4_1:85233953-85233972 Msa0580170:five_prime_UTR 55.0%
CTTCTACGGGCAATGTTGGG+GGG - chr4_1:85233954-85233973 Msa0580170:five_prime_UTR 55.0%
GGCAGACCCAACCTGAAAGT+TGG - chr4_1:85234029-85234048 Msa0580170:five_prime_UTR 55.0%
!! TTGCTGTTGTGCTGGCTTGG+AGG - chr4_1:85234107-85234126 Msa0580170:five_prime_UTR 55.0%
TACGCTCCTTGGGATCTCCC+AGG - chr4_1:85231772-85231791 Msa0580170:intron 60.0%
!! CACACACGGGCTGGCTTCTA+CGG - chr4_1:85233940-85233959 Msa0580170:five_prime_UTR 60.0%
!! ACACACGGGCTGGCTTCTAC+GGG - chr4_1:85233941-85233960 Msa0580170:five_prime_UTR 60.0%
TCATTTGCAGGGTCGGGCGC+AGG + chr4_1:85233503-85233522 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 85231183 85234385 85231183 ID=Msa0580170;Name=Msa0580170
chr4_1 mRNA 85231183 85234385 85231183 ID=Msa0580170-mRNA-1;Parent=Msa0580170;Name=Msa0580170-mRNA-1;_AED=0.04;_eAED=0.04;_QI=454|1|1|1|1|1|4|319|490
chr4_1 exon 85231183 85231732 85231183 ID=Msa0580170-mRNA-1:exon:31221;Parent=Msa0580170-mRNA-1
chr4_1 exon 85231958 85232764 85231958 ID=Msa0580170-mRNA-1:exon:31220;Parent=Msa0580170-mRNA-1
chr4_1 exon 85233404 85233681 85233404 ID=Msa0580170-mRNA-1:exon:31219;Parent=Msa0580170-mRNA-1
chr4_1 exon 85233775 85234385 85233775 ID=Msa0580170-mRNA-1:exon:31218;Parent=Msa0580170-mRNA-1
chr4_1 five_prime_UTR 85233932 85234385 85233932 ID=Msa0580170-mRNA-1:five_prime_utr;Parent=Msa0580170-mRNA-1
chr4_1 CDS 85233775 85233931 85233775 ID=Msa0580170-mRNA-1:cds;Parent=Msa0580170-mRNA-1
chr4_1 CDS 85233404 85233681 85233404 ID=Msa0580170-mRNA-1:cds;Parent=Msa0580170-mRNA-1
chr4_1 CDS 85231958 85232764 85231958 ID=Msa0580170-mRNA-1:cds;Parent=Msa0580170-mRNA-1
chr4_1 CDS 85231502 85231732 85231502 ID=Msa0580170-mRNA-1:cds;Parent=Msa0580170-mRNA-1
chr4_1 three_prime_UTR 85231183 85231501 85231183 ID=Msa0580170-mRNA-1:three_prime_utr;Parent=Msa0580170-mRNA-1
Gene Sequence

>Msa0580170

ATGGCTATACCTAAATTGGTACCTGGATTTCGATTCTCTCCAACGGGAGTTGAATTGATTAAATACTTTCTTAAGAGGAAAGTGTTGGGAAAAAAGTTTCATAACGATGTCATTGCTGAACTTGATATATACAAATACGCTCCTTGGGATCTCCCAGAATTATCTTATCTCCAAAACGGGGATTTGGAGTGGTACTTTTTCTGTCCTATTGAGAAGAAGTATCGAAGTGGGCCAAGGATGAAACGAGCTACGGAAATTGGGTTTTGGAAAGCTACTGGTCAGGATCGAGCTGTTCAACAGAATAATCAAACGGTGGGGATGATTAAAACCCTAATATTTCACACTGGAAAATCACCTCGTGGTGATCGAACCGATTGGGTTATGCATGAGTATAGGCTTGAAGATAAGGACTTGGCTGACAAAGGAATTGTTCAGGATTCCTACGTAATCTGTAAGGTATTTCAAAAAGAAGGTCCTGGTCCTAGGAATGGTGCACAATATGGGAGACCATTTAATGAGGAAGACTGGAGTGATGATGAAGTAGGAATACCTTTTGCTGAATCTGCTGCACTAGTTCCCAGTTTGCCTGTGACATCTAATAGTTCTGTTCTAAATGATCAGAATCTCCAAATTAGTGGATATATTGGTTCGATATCCATACCGTGTCAATCAGAATTGGCGCCTTCTCTGGACCCAACAAATTCATGTCAAACAGGATTGACACCTTCTCCTGACCCTGCAAATCCATGTCAAACAGGATTTATGCCTTATCCAGACCCTGTGAATCCTTGTCAAACAGGAGGATTTATGCCGTCTCCTGACCCAGCAAATTCATGTCAAACAGGATTGACGCCTTCTCCAGACCCTTCAAATTCTTGTCAAACAGGATTTATGCCTTATCCAGACCCTGTGAATTCTTGTCAAACAGGATTTATGCCTGCTTCCGACCCTGCAAATTCATGTCAAACAGAATTTATGCTGTCCCCTGACCTTGCGAGTTCATGTCAAATAGGATTGATGCCTTTGCCCGACCCTGCAAATGATTCATATCCAGACAATCAAGCTGTTAACGACGATGATGATGATGATATTCTAGCAATGCTTGATATTTTCAAAGACAACAGCGTATTGCCTGCGCCCGACCCTGCAAATGATTCATATCCAGACAATCAAACTGTTAATGATGATGATGATATTCTAGCAATGCTTGATATTTTCGAAGACAACGGCGTATTGCCTGAGGAAAACATTGCTGAAGGTGCACTCTTAACTGACTTTTTTGATGGCTTGGAAGACGTGGATTGCTCGTCTGATTTGGGATCTGTTGGCCAGAATGCAGACTTTAGCACACACGGGCTGGCTTCTACGGGCAATGTTGGGGGGCATGACGACTTCGATTTCATGGAGTTGATTGATCTAGACTCTGATACGTTCTGGCAGACCCAACCTGAAAGTTGGAGTCGAAATAAATAA
Protein sequence

>Msa0580170

MAIPKLVPGFRFSPTGVELIKYFLKRKVLGKKFHNDVIAELDIYKYAPWDLPELSYLQNGDLEWYFFCPIEKKYRSGPRMKRATEIGFWKATGQDRAVQQNNQTVGMIKTLIFHTGKSPRGDRTDWVMHEYRLEDKDLADKGIVQDSYVICKVFQKEGPGPRNGAQYGRPFNEEDWSDDEVGIPFAESAALVPSLPVTSNSSVLNDQNLQISGYIGSISIPCQSELAPSLDPTNSCQTGLTPSPDPANPCQTGFMPYPDPVNPCQTGGFMPSPDPANSCQTGLTPSPDPSNSCQTGFMPYPDPVNSCQTGFMPASDPANSCQTEFMLSPDLASSCQIGLMPLPDPANDSYPDNQAVNDDDDDDILAMLDIFKDNSVLPAPDPANDSYPDNQTVNDDDDILAMLDIFEDNGVLPEENIAEGALLTDFFDGLEDVDCSSDLGSVGQNADFSTHGLASTGNVGGHDDFDFMELIDLDSDTFWQTQPESWSRNK*